BLASTX nr result

ID: Mentha29_contig00032349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00032349
         (283 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    82   6e-14
ref|XP_004250685.1| PREDICTED: uncharacterized protein LOC101254...    57   3e-06
ref|XP_004240779.1| PREDICTED: uncharacterized protein LOC101256...    57   3e-06

>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 45/93 (48%), Positives = 54/93 (58%)
 Frame = +1

Query: 1   EEFAMVDKQVVDRGPKLNSQQQQLLNGECTALEVKEALFSMPSSKAPGIDGYNAYFFEKA 180
           +   MVDK VV RGP L+  QQ LL  + TA+EVK  LFSM SSKAPGIDGYN +FF+ +
Sbjct: 93  DSLPMVDKNVVKRGPMLSQHQQDLLCSKFTAVEVKNVLFSMDSSKAPGIDGYNVHFFKCS 152

Query: 181 LPXXXXXXXXXXXXXXXTGHLPKEINVALVTLL 279
                            TG +PK IN   +TLL
Sbjct: 153 WNIIGDSVIDAILDFFKTGFMPKIINCTYMTLL 185


>ref|XP_004250685.1| PREDICTED: uncharacterized protein LOC101254263 [Solanum
           lycopersicum]
          Length = 140

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/88 (38%), Positives = 46/88 (52%)
 Frame = +1

Query: 16  VDKQVVDRGPKLNSQQQQLLNGECTALEVKEALFSMPSSKAPGIDGYNAYFFEKALPXXX 195
           ++ QV+ RGP L+ Q +  L    T  E+ +AL S+ S KAPGIDGYNA FF+       
Sbjct: 11  INTQVMKRGPVLSRQHRIKLCATITDHEIVKALKSIGSDKAPGIDGYNALFFKHTWKIIE 70

Query: 196 XXXXXXXXXXXXTGHLPKEINVALVTLL 279
                       TG+L K  N  LV+L+
Sbjct: 71  HDVIDAVKSFFNTGNLFKSFNCTLVSLI 98


>ref|XP_004240779.1| PREDICTED: uncharacterized protein LOC101256493 [Solanum
           lycopersicum]
          Length = 441

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/88 (38%), Positives = 45/88 (51%)
 Frame = +1

Query: 16  VDKQVVDRGPKLNSQQQQLLNGECTALEVKEALFSMPSSKAPGIDGYNAYFFEKALPXXX 195
           ++ QV+ RGP L+ Q +  L    T  E+ EAL S+ + KAPGIDGYNA FF+       
Sbjct: 323 INVQVMKRGPVLSRQHRIQLCATITDQEIVEALKSIGNEKAPGIDGYNALFFKHTWKIIE 382

Query: 196 XXXXXXXXXXXXTGHLPKEINVALVTLL 279
                       TG L K  N  LVT++
Sbjct: 383 HDVIDAVKSFFTTGKLFKPFNCTLVTVI 410


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