BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00030403
         (552 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus...   253   2e-65
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]       201   1e-49
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   191   1e-46
ref|XP_007014569.1| Pseudouridine synthase isoform 3 [Theobroma ...   190   2e-46
ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma ...   190   2e-46
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   189   4e-46
ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma ...   185   6e-45
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   184   2e-44
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   184   2e-44
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622...   183   2e-44
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr...   183   2e-44
ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prun...   183   2e-44
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              182   6e-44
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]        181   1e-43
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   181   1e-43
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   180   2e-43
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592...   180   2e-43
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik...   178   7e-43
gb|AFK45334.1| unknown [Medicago truncatula]                          177   2e-42
ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago trun...   177   2e-42

>gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus guttatus]
          Length = 435

 Score =  253 bits (646), Expect = 2e-65
 Identities = 125/204 (61%), Positives = 149/204 (73%), Gaps = 21/204 (10%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TWRKD+K +DIEDA+   APGKIR  SVSQV+RDFHPNFSAKWR Y YIFPF+DENVDDE
Sbjct: 192 TWRKDIKTVDIEDAINGVAPGKIRAISVSQVTRDFHPNFSAKWRRYLYIFPFDDENVDDE 251

Query: 183 VGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQ-QSGTKPFTFEVSRVNHL--- 350
             +C+K+ L+  +CHD +YGE  G + C +E DDY QT+ Q+G KP +F+VS VN L   
Sbjct: 252 ASQCEKNVLDSDVCHDGRYGELPGVENCGNEIDDYEQTETQTGHKPLSFDVSCVNRLLHH 311

Query: 351 -----------------XXXXGPPTECFIHHARAAEAYLPCPKGGVGSKVMCVELVANRF 479
                                GPPTECFI H+RA+EAY+ CPK G  SK+MC+ELVANRF
Sbjct: 312 LEGKLLSFRMFARDTKASRNIGPPTECFIFHSRASEAYIRCPKEGTRSKIMCIELVANRF 371

Query: 480 LRKMVRVLVATAIREASAGAEEDA 551
           LRKMVRVLVATAIREA+AGA+EDA
Sbjct: 372 LRKMVRVLVATAIREAAAGADEDA 395


>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
          Length = 406

 Score =  201 bits (510), Expect = 1e-49
 Identities = 111/202 (54%), Positives = 129/202 (63%), Gaps = 20/202 (9%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TWRK+V+A DI +A+ D+APGK+RVTSVSQVSR+FHPNFSAKWR Y YIFP N E  D E
Sbjct: 183 TWRKEVEAEDIMEAINDSAPGKLRVTSVSQVSREFHPNFSAKWRRYLYIFPLNHEYRDRE 242

Query: 183 VGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHL---- 350
             + +K++     C DDQ G                   Q+G KP  FEVSRV+ L    
Sbjct: 243 AFKSEKNDFCGDNCLDDQSG------------------MQTGCKPLNFEVSRVSQLLLHL 284

Query: 351 ----------------XXXXGPPTECFIHHARAAEAYLPCPKGGVGSKVMCVELVANRFL 482
                               GPPTECFI HARAAEAYLPC +    SK+MCVELVA+RFL
Sbjct: 285 EGKLLSFRMFARDTKASRSIGPPTECFIFHARAAEAYLPCSEEETKSKIMCVELVADRFL 344

Query: 483 RKMVRVLVATAIREASAGAEED 548
           RKMVRVLVATAIREA+AGA+ED
Sbjct: 345 RKMVRVLVATAIREAAAGADED 366


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  191 bits (484), Expect = 1e-46
 Identities = 108/215 (50%), Positives = 136/215 (63%), Gaps = 32/215 (14%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TW+KDVK  DIEDA+   APGK+RV SVS+VSR FHPNFSAKWRHYFYIFP ND +  ++
Sbjct: 185 TWKKDVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQ 244

Query: 183 VGECKKHNLNKTICHDDQYGERLGEQTCK------------DEDDDYVQTQQSGTKPFTF 326
           + E  + ++ K I  +++YGE+  E   +            D+D ++    +S  KP TF
Sbjct: 245 ISE-NEMDIQK-ISFNEKYGEQGSECPAQYNGGENTENLIFDDDGEF----ESRKKPSTF 298

Query: 327 EVSRVNHL--------------------XXXXGPPTECFIHHARAAEAYLPCPKGGVGSK 446
            +SRV+ L                        GPPTECF+ HARA EA L     G G+K
Sbjct: 299 SISRVDQLLRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTK 358

Query: 447 VMCVELVANRFLRKMVRVLVATAIREASAGAEEDA 551
           VMC+ELVANRFLRKMVRVLVAT+IREA+AGAE+DA
Sbjct: 359 VMCIELVANRFLRKMVRVLVATSIREAAAGAEQDA 393


>ref|XP_007014569.1| Pseudouridine synthase isoform 3 [Theobroma cacao]
           gi|508784932|gb|EOY32188.1| Pseudouridine synthase
           isoform 3 [Theobroma cacao]
          Length = 303

 Score =  190 bits (482), Expect = 2e-46
 Identities = 108/210 (51%), Positives = 129/210 (61%), Gaps = 27/210 (12%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TWRKDVK  DIEDA+   APGK+RV SVS+VSR FHPNFSAKWRHY YIFP +++ ++ +
Sbjct: 56  TWRKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQ 115

Query: 183 VGECKKHNLNKTICHDDQYGERLG---EQTCKDEDDDYVQTQQSG----TKPFTFEVSRV 341
             E KK   N     D  Y E+     E    +  ++ + +   G     KP  F V RV
Sbjct: 116 SCENKKEVEN--FISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRV 173

Query: 342 NHLXXXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMCVE 461
           N L                        GPPTECF++HARAAEA +PC   G G +VMCVE
Sbjct: 174 NQLLQQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSDHGEGREVMCVE 233

Query: 462 LVANRFLRKMVRVLVATAIREASAGAEEDA 551
           LVANRFLRKMVRVLVAT+IREA+AGAEEDA
Sbjct: 234 LVANRFLRKMVRVLVATSIREAAAGAEEDA 263


>ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
           gi|508784930|gb|EOY32186.1| Pseudouridine synthase
           isoform 1 [Theobroma cacao]
          Length = 444

 Score =  190 bits (482), Expect = 2e-46
 Identities = 108/210 (51%), Positives = 129/210 (61%), Gaps = 27/210 (12%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TWRKDVK  DIEDA+   APGK+RV SVS+VSR FHPNFSAKWRHY YIFP +++ ++ +
Sbjct: 197 TWRKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQ 256

Query: 183 VGECKKHNLNKTICHDDQYGERLG---EQTCKDEDDDYVQTQQSG----TKPFTFEVSRV 341
             E KK   N     D  Y E+     E    +  ++ + +   G     KP  F V RV
Sbjct: 257 SCENKKEVEN--FISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRV 314

Query: 342 NHLXXXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMCVE 461
           N L                        GPPTECF++HARAAEA +PC   G G +VMCVE
Sbjct: 315 NQLLQQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSDHGEGREVMCVE 374

Query: 462 LVANRFLRKMVRVLVATAIREASAGAEEDA 551
           LVANRFLRKMVRVLVAT+IREA+AGAEEDA
Sbjct: 375 LVANRFLRKMVRVLVATSIREAAAGAEEDA 404


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 443

 Score =  189 bits (480), Expect = 4e-46
 Identities = 108/212 (50%), Positives = 130/212 (61%), Gaps = 29/212 (13%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND-----E 167
           TWRKDV+  +IEDA+  +APGKIRV SVS+VSR FHPNFSAKWR Y YIFP ND     +
Sbjct: 197 TWRKDVRPHEIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQ 256

Query: 168 NVDDE----VGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVS 335
           + D E    +   +K++  +  C +    E + E    D+D+      +   KP  F + 
Sbjct: 257 SFDSEDLENLRSYEKYDEQRNGCAELTSEEHVEELITSDKDE-----LEGAKKPRIFSIC 311

Query: 336 RVNHLXXXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMC 455
           RVN L                        GPPTECFI+HARA EA LPCP  G G KVMC
Sbjct: 312 RVNQLLQQLEGKLLSYKIFARDTKASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMC 371

Query: 456 VELVANRFLRKMVRVLVATAIREASAGAEEDA 551
           VELVANRFLRKMVRVLVAT+IREA+AGAE+DA
Sbjct: 372 VELVANRFLRKMVRVLVATSIREAAAGAEDDA 403


>ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
           gi|508784931|gb|EOY32187.1| Pseudouridine synthase
           isoform 2 [Theobroma cacao]
          Length = 446

 Score =  185 bits (470), Expect = 6e-45
 Identities = 108/212 (50%), Positives = 129/212 (60%), Gaps = 29/212 (13%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TWRKDVK  DIEDA+   APGK+RV SVS+VSR FHPNFSAKWRHY YIFP +++ ++ +
Sbjct: 197 TWRKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQ 256

Query: 183 VGECKKHNLNKTICHDDQYGERLG---EQTCKDEDDDYVQTQQSG----TKPFTFEVSRV 341
             E KK   N     D  Y E+     E    +  ++ + +   G     KP  F V RV
Sbjct: 257 SCENKKEVEN--FISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRV 314

Query: 342 NHL--------------------XXXXGPPTECFIHHARAAEAYLPCPKG--GVGSKVMC 455
           N L                        GPPTECF++HARAAEA +PC     G G +VMC
Sbjct: 315 NQLLQQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSVNDHGEGREVMC 374

Query: 456 VELVANRFLRKMVRVLVATAIREASAGAEEDA 551
           VELVANRFLRKMVRVLVAT+IREA+AGAEEDA
Sbjct: 375 VELVANRFLRKMVRVLVATSIREAAAGAEEDA 406


>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
           gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 457

 Score =  184 bits (466), Expect = 2e-44
 Identities = 105/212 (49%), Positives = 126/212 (59%), Gaps = 29/212 (13%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND-ENVDD 179
           TWRKDVK  +IEDA+ D APGK+RV S+S+VSR FHPNFSAKWR Y YIFP ND EN ++
Sbjct: 211 TWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREE 270

Query: 180 EVGECKKHNLN--------KTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVS 335
             GE    N +        +  C +    E +      DED+      Q   KP +F V 
Sbjct: 271 IEGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDE-----LQGAKKPRSFSVC 325

Query: 336 RVNHLXXXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMC 455
           RVN L                        GPPTECF++HARA E  LP P    G +VMC
Sbjct: 326 RVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMC 385

Query: 456 VELVANRFLRKMVRVLVATAIREASAGAEEDA 551
           VEL+ANRFLRKMVRVLVAT++REA+AGA+EDA
Sbjct: 386 VELIANRFLRKMVRVLVATSVREAAAGAQEDA 417


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
           gi|550318755|gb|ERP50021.1| hypothetical protein
           POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  184 bits (466), Expect = 2e-44
 Identities = 105/212 (49%), Positives = 126/212 (59%), Gaps = 29/212 (13%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND-ENVDD 179
           TWRKDVK  +IEDA+ D APGK+RV S+S+VSR FHPNFSAKWR Y YIFP ND EN ++
Sbjct: 202 TWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREE 261

Query: 180 EVGECKKHNLN--------KTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVS 335
             GE    N +        +  C +    E +      DED+      Q   KP +F V 
Sbjct: 262 IEGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDE-----LQGAKKPRSFSVC 316

Query: 336 RVNHLXXXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMC 455
           RVN L                        GPPTECF++HARA E  LP P    G +VMC
Sbjct: 317 RVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMC 376

Query: 456 VELVANRFLRKMVRVLVATAIREASAGAEEDA 551
           VEL+ANRFLRKMVRVLVAT++REA+AGA+EDA
Sbjct: 377 VELIANRFLRKMVRVLVATSVREAAAGAQEDA 408


>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
          Length = 454

 Score =  183 bits (465), Expect = 2e-44
 Identities = 110/210 (52%), Positives = 122/210 (58%), Gaps = 27/210 (12%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND-----E 167
           TWRKDVK  +IEDA+   APGKIRV SVSQVSR FHPNFSAKWR Y YIFP ND     +
Sbjct: 210 TWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQ 269

Query: 168 NVDDEVGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNH 347
           ++D EV     H  N      +   E +      DE         S  KP  F + RVN 
Sbjct: 270 SIDSEVEVENFHTSNNVGKQSNGCYENIENLLINDEGG-----FGSHEKPRNFTICRVNL 324

Query: 348 L--------------------XXXXGPPTECFIHHARAAEAYLPCPKG--GVGSKVMCVE 461
           L                        GPPTECFI+HARA EA LPCP    G G KVMCVE
Sbjct: 325 LLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVE 384

Query: 462 LVANRFLRKMVRVLVATAIREASAGAEEDA 551
           LVANRFLRKMVRVLVAT +REA+AGA+EDA
Sbjct: 385 LVANRFLRKMVRVLVATLVREAAAGADEDA 414


>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
           gi|557556408|gb|ESR66422.1| hypothetical protein
           CICLE_v10008288mg [Citrus clementina]
          Length = 447

 Score =  183 bits (465), Expect = 2e-44
 Identities = 110/210 (52%), Positives = 122/210 (58%), Gaps = 27/210 (12%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND-----E 167
           TWRKDVK  +IEDA+   APGKIRV SVSQVSR FHPNFSAKWR Y YIFP ND     +
Sbjct: 203 TWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQ 262

Query: 168 NVDDEVGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNH 347
           ++D EV     H  N      +   E +      DE         S  KP  F + RVN 
Sbjct: 263 SIDSEVEVENFHTSNNVGKQSNGCYENIENLLINDEGG-----FGSHEKPRNFTICRVNL 317

Query: 348 L--------------------XXXXGPPTECFIHHARAAEAYLPCPKG--GVGSKVMCVE 461
           L                        GPPTECFI+HARA EA LPCP    G G KVMCVE
Sbjct: 318 LLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVE 377

Query: 462 LVANRFLRKMVRVLVATAIREASAGAEEDA 551
           LVANRFLRKMVRVLVAT +REA+AGA+EDA
Sbjct: 378 LVANRFLRKMVRVLVATLVREAAAGADEDA 407


>ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
           gi|462419663|gb|EMJ23926.1| hypothetical protein
           PRUPE_ppa006478mg [Prunus persica]
          Length = 409

 Score =  183 bits (465), Expect = 2e-44
 Identities = 103/211 (48%), Positives = 128/211 (60%), Gaps = 28/211 (13%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TWRKDVK+ DI DA+   APGK+RV SV++VSR FHPNF+AKWRHY YIFPFNDE  D E
Sbjct: 162 TWRKDVKSQDITDAINSAAPGKLRVVSVTEVSRAFHPNFTAKWRHYLYIFPFNDEE-DME 220

Query: 183 VGECKKHNLNKTICHDDQYGERLGEQTCKD--------EDDDYVQTQQSGTKPFTFEVSR 338
                  N       ++ +  + G   C +         D++ ++T     KP  F VSR
Sbjct: 221 QSNQSGENAQNFKSLENYHEHKNGCDQCNEANVGNLVINDNEDLET----LKPREFTVSR 276

Query: 339 VNHLXXXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMCV 458
           VN L                        GPPTECF++HARA E+ LPC +   G +VMC+
Sbjct: 277 VNQLLQKLEGKLLSYKMFARDTKPSRNEGPPTECFLYHARAKESKLPCSEHEKGRRVMCI 336

Query: 459 ELVANRFLRKMVRVLVATAIREASAGAEEDA 551
           ELVANRFLR+MVRVLVAT+IREA+AGA+EDA
Sbjct: 337 ELVANRFLRRMVRVLVATSIREAAAGADEDA 367


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  182 bits (461), Expect = 6e-44
 Identities = 100/203 (49%), Positives = 120/203 (59%), Gaps = 20/203 (9%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TW+KDVK  DIEDA+   APGK+RV SVS+VSR FHPNFSAKWRHYFYIFP ND +  ++
Sbjct: 185 TWKKDVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQ 244

Query: 183 VGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHL---- 350
           + E                          + D   +   ++  KP TF +SRV+ L    
Sbjct: 245 ISE-------------------------NEMDIQKISFNENRKKPSTFSISRVDQLLRQL 279

Query: 351 ----------------XXXXGPPTECFIHHARAAEAYLPCPKGGVGSKVMCVELVANRFL 482
                               GPPTECF+ HARA EA L     G G+KVMC+ELVANRFL
Sbjct: 280 EGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTKVMCIELVANRFL 339

Query: 483 RKMVRVLVATAIREASAGAEEDA 551
           RKMVRVLVAT+IREA+AGAE+DA
Sbjct: 340 RKMVRVLVATSIREAAAGAEQDA 362


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score =  181 bits (459), Expect = 1e-43
 Identities = 107/203 (52%), Positives = 124/203 (61%), Gaps = 20/203 (9%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TWRKD+   DIE+A+ + A GK++  SVS+VSR FHPNFSAKWR Y YIFPFNDE  D+E
Sbjct: 204 TWRKDITCQDIEEAINNAALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDEE-DEE 262

Query: 183 VGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLXXXX 362
                  NL      +   GE   E       DD  + + SG KP +F VSRV+ L    
Sbjct: 263 QSNKNGENLETYEKIESGCGEWNDESFGNLIIDDSEELE-SGKKPSSFSVSRVDQLLRLL 321

Query: 363 --------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMCVELVANRFL 482
                               GPPTECFI+HARAAEA LP      G K+MCVELVANRFL
Sbjct: 322 EGKLLSYKMFARDTKASRNEGPPTECFIYHARAAEARLPTSDCTEGRKIMCVELVANRFL 381

Query: 483 RKMVRVLVATAIREASAGAEEDA 551
           RKMVRVLVAT+IREA+AGAEEDA
Sbjct: 382 RKMVRVLVATSIREAAAGAEEDA 404


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  181 bits (459), Expect = 1e-43
 Identities = 109/215 (50%), Positives = 127/215 (59%), Gaps = 32/215 (14%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND-ENVD- 176
           TWR DVK  DIED++   APGK+R +SVSQVSR FHPNFSAKWR Y YI P ND EN++ 
Sbjct: 195 TWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEP 254

Query: 177 -----DEVGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYV-----QTQQSGTKPFTF 326
                + V   ++ N  K    +       GE+      D+ V     Q   S  KP TF
Sbjct: 255 DSTTWENVENREEENFVKIEASN-------GEKCVDGIHDNLVLSPNDQELVSADKPQTF 307

Query: 327 EVSRVNHLXXXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGSK 446
            ++RVN L                        GPPTECF++HARAAE  LPC + GVG  
Sbjct: 308 SITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRS 367

Query: 447 VMCVELVANRFLRKMVRVLVATAIREASAGAEEDA 551
           VMCVELVANRFLRKMVRVLVATAIREA+AGA EDA
Sbjct: 368 VMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 402


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  180 bits (457), Expect = 2e-43
 Identities = 109/216 (50%), Positives = 125/216 (57%), Gaps = 33/216 (15%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND------ 164
           TWR DVK  DIED++   APGK+R +SVSQVSR FHPNFSAKWR Y YI P ND      
Sbjct: 195 TWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEP 254

Query: 165 -----ENVDDEVGE--CKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFT 323
                ENV++   E   K    N   C D  +   +        D++ V    S  KP T
Sbjct: 255 DSTTWENVENREEENFVKIEASNGEKCVDGIHDNLV----LSPNDEELV----SADKPQT 306

Query: 324 FEVSRVNHLXXXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGS 443
           F ++RVN L                        GPPTECF++HARAAE  LPC + GVG 
Sbjct: 307 FSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGR 366

Query: 444 KVMCVELVANRFLRKMVRVLVATAIREASAGAEEDA 551
            VMCVELVANRFLRKMVRVLVATAIREA+AGA EDA
Sbjct: 367 SVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 402


>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
          Length = 436

 Score =  180 bits (456), Expect = 2e-43
 Identities = 100/207 (48%), Positives = 128/207 (61%), Gaps = 24/207 (11%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TWRKDVK  D++ AL   APGKIRV S+++VSR+FHPNFSAKWRHY YIFP     +DD 
Sbjct: 195 TWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWRHYLYIFP-----IDDV 249

Query: 183 VGECKKHNL----NKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHL 350
           +GE ++  +    +  +   ++ G+   +++  +E +D       G KP  FEV +VN L
Sbjct: 250 LGEKQRGQIWIDGSTDVHQQNECGKSDIDKSNVNEINDENNELVHGNKPTKFEVGKVNRL 309

Query: 351 XXXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMCVELVA 470
                                   GPPTECF+ HARA E  +PC K G   K MC+ELVA
Sbjct: 310 LGQLEGKLLSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKDGSLMKTMCIELVA 369

Query: 471 NRFLRKMVRVLVATAIREASAGAEEDA 551
           NRFLRKMVRVLVATAIREA+AGA++DA
Sbjct: 370 NRFLRKMVRVLVATAIREAAAGADDDA 396


>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum
           lycopersicum]
          Length = 436

 Score =  178 bits (452), Expect = 7e-43
 Identities = 100/206 (48%), Positives = 124/206 (60%), Gaps = 23/206 (11%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TWRKDVK  D++ AL   APGKIRV S+++VSR+FHPNFSAKWRHY YIFP +D   + +
Sbjct: 195 TWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWRHYLYIFPIDDVLGEKQ 254

Query: 183 VGEC---KKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLX 353
            G+       N+++    D    ++       +E+D  V     G KP  FEV +VN L 
Sbjct: 255 GGQIWIDDSTNVHQQNECDKSDVDKSNVNEINNENDKLVH----GNKPTKFEVGKVNRLL 310

Query: 354 XXX--------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMCVELVAN 473
                                  GPPTECF+ HARA E  +PC K G   K MC+ELVAN
Sbjct: 311 GQLEGKLLSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKDGSHMKTMCIELVAN 370

Query: 474 RFLRKMVRVLVATAIREASAGAEEDA 551
           RFLRKMVRVLVATAIREA+AGA++DA
Sbjct: 371 RFLRKMVRVLVATAIREAAAGADDDA 396


>gb|AFK45334.1| unknown [Medicago truncatula]
          Length = 400

 Score =  177 bits (449), Expect = 2e-42
 Identities = 99/203 (48%), Positives = 119/203 (58%), Gaps = 20/203 (9%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TW+KD+K  +IEDA+ D APGK+RV SV +VSR FHPNFSAKWR Y YIFP  D    D+
Sbjct: 170 TWKKDIKPREIEDAINDAAPGKLRVVSVYEVSRAFHPNFSAKWRRYLYIFPLTDGQDKDQ 229

Query: 183 VGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLXXXX 362
            G       N   C    Y E      C  +  D ++ +    K + F V +VN L    
Sbjct: 230 SGG------NGESCDSFIYNE-----ICDSDSKDELEKEN---KSYVFGVRKVNRLLQKL 275

Query: 363 --------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMCVELVANRFL 482
                               GPPTECF+HHARA EA LP  + G  ++VMC+ELVANRFL
Sbjct: 276 EGKMLSYKMFARDTKASRNDGPPTECFVHHARAMEAKLPITENGEETRVMCIELVANRFL 335

Query: 483 RKMVRVLVATAIREASAGAEEDA 551
           RKMVRVLVAT IREA+AGAE+DA
Sbjct: 336 RKMVRVLVATTIREAAAGAEDDA 358


>ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago truncatula]
           gi|355524623|gb|AET05077.1| tRNA pseudouridine synthase
           A [Medicago truncatula]
          Length = 400

 Score =  177 bits (449), Expect = 2e-42
 Identities = 99/203 (48%), Positives = 119/203 (58%), Gaps = 20/203 (9%)
 Frame = +3

Query: 3   TWRKDVKALDIEDALKDTAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENVDDE 182
           TW+KD+K  +IEDA+ D APGK+RV SV +VSR FHPNFSAKWR Y YIFP  D    D+
Sbjct: 170 TWKKDIKPREIEDAINDAAPGKLRVVSVYEVSRAFHPNFSAKWRRYLYIFPLTDGQDKDQ 229

Query: 183 VGECKKHNLNKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLXXXX 362
            G       N   C    Y E      C  +  D ++ +    K + F V +VN L    
Sbjct: 230 SGG------NGESCDSFIYNE-----ICDSDSKDELEKEN---KSYVFGVRKVNRLLQKL 275

Query: 363 --------------------GPPTECFIHHARAAEAYLPCPKGGVGSKVMCVELVANRFL 482
                               GPPTECF+HHARA EA LP  + G  ++VMC+ELVANRFL
Sbjct: 276 EGKMLSYKMFARDTKASRNDGPPTECFVHHARAMEAKLPITENGEETRVMCIELVANRFL 335

Query: 483 RKMVRVLVATAIREASAGAEEDA 551
           RKMVRVLVAT IREA+AGAE+DA
Sbjct: 336 RKMVRVLVATTIREAAAGAEDDA 358