BLASTX nr result

ID: Mentha29_contig00029313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00029313
         (476 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU21515.1| hypothetical protein MIMGU_mgv1a000493mg [Mimulus...   152   4e-35
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ...   131   8e-29
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ...   126   3e-27
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ...   123   2e-26
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ...   123   2e-26
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr...   123   2e-26
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...   122   7e-26
ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prun...   120   2e-25
ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495...   119   4e-25
ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair ...   119   6e-25
ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair ...   119   6e-25
ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair ...   119   6e-25
ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair ...   119   6e-25
ref|XP_003616940.1| MMS19 nucleotide excision repair protein-lik...   115   5e-24
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_006595124.1| PREDICTED: DNA repair/transcription protein ...   115   8e-24
ref|XP_007024314.1| MMS19 nucleotide excision repair protein, pu...   113   3e-23
ref|XP_007024313.1| MMS19 nucleotide excision repair protein, pu...   113   3e-23
ref|XP_007024312.1| MMS19 nucleotide excision repair protein, pu...   113   3e-23
ref|XP_007024310.1| MMS19 nucleotide excision repair protein, pu...   113   3e-23

>gb|EYU21515.1| hypothetical protein MIMGU_mgv1a000493mg [Mimulus guttatus]
          Length = 1120

 Score =  152 bits (385), Expect = 4e-35
 Identities = 82/126 (65%), Positives = 90/126 (71%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           MGDSVQ IKH+ELYV+S+A PSQQ A VDAVAAL+K  + TL+ LVREMEMYLTTTDSI+
Sbjct: 1   MGDSVQLIKHVELYVNSSATPSQQVASVDAVAALLKNDLLTLDALVREMEMYLTTTDSIV 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           RSRG                        +GFFTERLADWKAL GAIVGCLALLRRK DVG
Sbjct: 61  RSRGTLLLAEILEQLTSKPLNSTSIHSLIGFFTERLADWKALRGAIVGCLALLRRKVDVG 120

Query: 19  SVTSSE 2
            VT SE
Sbjct: 121 IVTDSE 126


>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Solanum tuberosum]
          Length = 1170

 Score =  131 bits (330), Expect = 8e-29
 Identities = 68/123 (55%), Positives = 85/123 (69%)
 Frame = -2

Query: 370 SVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSIIRSR 191
           ++Q++ HIE YVSS+++ +QQAA VDA+A L+K  + +LETLVREMEMYLTTTD+IIRSR
Sbjct: 6   AIQYVIHIESYVSSSSSEAQQAASVDAIAVLLKNDLLSLETLVREMEMYLTTTDNIIRSR 65

Query: 190 GIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVGSVT 11
           GI                       + FFTERLADWKALHGA+VGCLALLRRK   G + 
Sbjct: 66  GILLLGELLMRLMSKPLGDTAISSLIEFFTERLADWKALHGALVGCLALLRRKTGTGMIN 125

Query: 10  SSE 2
            S+
Sbjct: 126 RSQ 128


>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Solanum lycopersicum]
          Length = 1153

 Score =  126 bits (317), Expect = 3e-27
 Identities = 66/126 (52%), Positives = 85/126 (67%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           +    + ++ IE YVSS+++ +QQAA +DA+A L+K  + +LETLVREMEMYLTTTD+II
Sbjct: 16  LSQPTELVRIIESYVSSSSSEAQQAASIDAIALLLKNDLLSLETLVREMEMYLTTTDNII 75

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           RSRGI                       + FFTERLADWKALHGA+VGCLALLRRK  VG
Sbjct: 76  RSRGILLLGELLMRLMSKPLGDTAISSLMEFFTERLADWKALHGALVGCLALLRRKTGVG 135

Query: 19  SVTSSE 2
            ++ S+
Sbjct: 136 MISRSQ 141


>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X2 [Citrus sinensis]
          Length = 1151

 Score =  123 bits (309), Expect = 2e-26
 Identities = 63/126 (50%), Positives = 85/126 (67%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q I+HIE +V+ +++P+ QAA +D +A+L+KK V T+ETLVREM MYLTTTD +I
Sbjct: 1   MAEASQLIQHIESFVNLSSSPTHQAASLDVIASLLKKNVLTIETLVREMGMYLTTTDDVI 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       L FFT+RLADWKAL GA+VGCLALLRRK   G
Sbjct: 61  RARGILLLGELLTHLASKPLDDATIHSMLAFFTDRLADWKALRGALVGCLALLRRKSSGG 120

Query: 19  SVTSSE 2
            +T+++
Sbjct: 121 VITTND 126


>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X1 [Citrus sinensis]
          Length = 1155

 Score =  123 bits (309), Expect = 2e-26
 Identities = 63/126 (50%), Positives = 85/126 (67%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q I+HIE +V+ +++P+ QAA +D +A+L+KK V T+ETLVREM MYLTTTD +I
Sbjct: 1   MAEASQLIQHIESFVNLSSSPTHQAASLDVIASLLKKNVLTIETLVREMGMYLTTTDDVI 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       L FFT+RLADWKAL GA+VGCLALLRRK   G
Sbjct: 61  RARGILLLGELLTHLASKPLDDATIHSMLAFFTDRLADWKALRGALVGCLALLRRKSSGG 120

Query: 19  SVTSSE 2
            +T+++
Sbjct: 121 VITTND 126


>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
           gi|557528866|gb|ESR40116.1| hypothetical protein
           CICLE_v10024743mg [Citrus clementina]
          Length = 1155

 Score =  123 bits (309), Expect = 2e-26
 Identities = 63/126 (50%), Positives = 85/126 (67%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q I+HIE +V+ +++P+ QAA +D +A+L+KK V T+ETLVREM MYLTTTD +I
Sbjct: 1   MAEASQLIQHIESFVNLSSSPTHQAASLDVIASLLKKNVLTIETLVREMGMYLTTTDDVI 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       L FFT+RLADWKAL GA+VGCLALLRRK   G
Sbjct: 61  RARGILLLGELLTHLASKPLDDATIHSMLAFFTDRLADWKALRGALVGCLALLRRKSSGG 120

Query: 19  SVTSSE 2
            +T+++
Sbjct: 121 VITTND 126


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
           truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
           excision repair protein-like protein [Medicago
           truncatula]
          Length = 1140

 Score =  122 bits (305), Expect = 7e-26
 Identities = 62/126 (49%), Positives = 80/126 (63%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q  +HIE YV S++ PS Q A +DA+  LIK    TLE LVRE++MYLT+TD++I
Sbjct: 1   MAETTQLTRHIESYVDSSSTPSHQVASLDAIVLLIKTNALTLEALVRELDMYLTSTDTLI 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           RSRGI                       +GFF ER+ADWKA+ GA+VGCLAL+RRK  VG
Sbjct: 61  RSRGILLLAEVLTRINSISLDSKTIHSLVGFFKERMADWKAVRGALVGCLALIRRKSVVG 120

Query: 19  SVTSSE 2
            VT S+
Sbjct: 121 MVTGSD 126


>ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
           gi|462413691|gb|EMJ18740.1| hypothetical protein
           PRUPE_ppa023072mg [Prunus persica]
          Length = 1158

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/126 (46%), Positives = 86/126 (68%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ + I+HIELYV ++ +P++QAA ++++ +L+K    T+E LV+EM MYLTTTD++I
Sbjct: 1   MAETTELIQHIELYVDTSRSPTEQAASLNSIISLVKSDFLTIEVLVKEMRMYLTTTDNVI 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       +GFFT+RLADW+AL GA+VGCLALLRRK + G
Sbjct: 61  RARGILLLAEVLTGLASKPLDNATIHSLIGFFTDRLADWRALRGALVGCLALLRRKVNAG 120

Query: 19  SVTSSE 2
            V++S+
Sbjct: 121 MVSASD 126


>ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495813 [Cicer arietinum]
          Length = 1138

 Score =  119 bits (298), Expect = 4e-25
 Identities = 60/126 (47%), Positives = 79/126 (62%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q  +HIE YV S++ P+ QA  +DA+  LIK    TLE LVRE++MYLT+TD++I
Sbjct: 1   MAETTQLTRHIESYVDSSSTPTHQATSLDAIGLLIKTNALTLEALVRELDMYLTSTDTVI 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       +GFF ERLADWKA+ GA+VGCLAL+RRK   G
Sbjct: 61  RARGILLLAEVLTRICSKPLDSETIHSLVGFFKERLADWKAVRGALVGCLALIRRKSVAG 120

Query: 19  SVTSSE 2
            VT S+
Sbjct: 121 MVTGSD 126


>ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X4 [Glycine max]
          Length = 1095

 Score =  119 bits (297), Expect = 6e-25
 Identities = 59/126 (46%), Positives = 82/126 (65%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q  +HIE YV S++ P+QQA+ ++AVA+L+      LE LVRE+EMYLTTTD+++
Sbjct: 1   MAETTQLTRHIESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVV 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       +GFF +RLADW+A+ GA+VGCLAL+RRK  VG
Sbjct: 61  RARGILLLAEVMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVVG 120

Query: 19  SVTSSE 2
            VT S+
Sbjct: 121 MVTDSD 126


>ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X3 [Glycine max]
          Length = 1102

 Score =  119 bits (297), Expect = 6e-25
 Identities = 59/126 (46%), Positives = 82/126 (65%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q  +HIE YV S++ P+QQA+ ++AVA+L+      LE LVRE+EMYLTTTD+++
Sbjct: 1   MAETTQLTRHIESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVV 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       +GFF +RLADW+A+ GA+VGCLAL+RRK  VG
Sbjct: 61  RARGILLLAEVMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVVG 120

Query: 19  SVTSSE 2
            VT S+
Sbjct: 121 MVTDSD 126


>ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X2 [Glycine max]
          Length = 1133

 Score =  119 bits (297), Expect = 6e-25
 Identities = 59/126 (46%), Positives = 82/126 (65%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q  +HIE YV S++ P+QQA+ ++AVA+L+      LE LVRE+EMYLTTTD+++
Sbjct: 1   MAETTQLTRHIESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVV 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       +GFF +RLADW+A+ GA+VGCLAL+RRK  VG
Sbjct: 61  RARGILLLAEVMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVVG 120

Query: 19  SVTSSE 2
            VT S+
Sbjct: 121 MVTDSD 126


>ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X1 [Glycine max]
          Length = 1135

 Score =  119 bits (297), Expect = 6e-25
 Identities = 59/126 (46%), Positives = 82/126 (65%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q  +HIE YV S++ P+QQA+ ++AVA+L+      LE LVRE+EMYLTTTD+++
Sbjct: 1   MAETTQLTRHIESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVV 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       +GFF +RLADW+A+ GA+VGCLAL+RRK  VG
Sbjct: 61  RARGILLLAEVMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVVG 120

Query: 19  SVTSSE 2
            VT S+
Sbjct: 121 MVTDSD 126


>ref|XP_003616940.1| MMS19 nucleotide excision repair protein-like protein [Medicago
           truncatula] gi|355518275|gb|AES99898.1| MMS19 nucleotide
           excision repair protein-like protein [Medicago
           truncatula]
          Length = 1139

 Score =  115 bits (289), Expect = 5e-24
 Identities = 57/126 (45%), Positives = 79/126 (62%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q  +HI+ Y+ S++  + Q + +DA+  LIK    TLE LVRE+++YLT+TD++I
Sbjct: 1   MAETTQLTRHIDSYIHSSSTSTHQVSSLDAIGLLIKTNALTLEALVRELDVYLTSTDTVI 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           RSRGI                       +GFF ERLADWKA+ GA+VGCL L+RRK DVG
Sbjct: 61  RSRGILLLAEVLTRINSISLDSKTIHSLVGFFKERLADWKAVRGALVGCLELIRRKSDVG 120

Query: 19  SVTSSE 2
            VT S+
Sbjct: 121 MVTGSD 126


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  115 bits (289), Expect = 5e-24
 Identities = 60/126 (47%), Positives = 81/126 (64%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M    Q  ++IE YV S+ + +QQAA VDA+A L+K  + TLETLV EM MYLTTTD+II
Sbjct: 1   MAQLSQLTQYIESYVDSSRSSTQQAASVDAIAYLLKNDILTLETLVTEMGMYLTTTDNII 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       + FFT+RLADW+AL GA++GCLAL++RK ++G
Sbjct: 61  RTRGILLLAELLTRLASKPLDNVTIHSLISFFTDRLADWRALRGALIGCLALMKRKSNMG 120

Query: 19  SVTSSE 2
            VT ++
Sbjct: 121 RVTDND 126


>ref|XP_006595124.1| PREDICTED: DNA repair/transcription protein mms19-like isoform X1
           [Glycine max]
          Length = 1132

 Score =  115 bits (287), Expect = 8e-24
 Identities = 58/126 (46%), Positives = 82/126 (65%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q  +HIE YV S++ P+ QAA ++A+A+L+     TLE L+RE+EMYLTTTD+++
Sbjct: 1   MAETTQLTRHIESYVDSSS-PTHQAASLNAIASLVNTDALTLEALIRELEMYLTTTDNVV 59

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       +GFF +RLADW+A+ GA+VGCLAL+RRK  VG
Sbjct: 60  RARGILLLAEVMTHIESKPLNSATIHSLVGFFKDRLADWRAVRGALVGCLALIRRKSVVG 119

Query: 19  SVTSSE 2
            VT S+
Sbjct: 120 MVTDSD 125


>ref|XP_007024314.1| MMS19 nucleotide excision repair protein, putative isoform 5
           [Theobroma cacao] gi|508779680|gb|EOY26936.1| MMS19
           nucleotide excision repair protein, putative isoform 5
           [Theobroma cacao]
          Length = 1157

 Score =  113 bits (282), Expect = 3e-23
 Identities = 60/126 (47%), Positives = 80/126 (63%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q I+ IE +V S  +P+QQAA +D +A+L+K    T+ETLVREME YLTT D+II
Sbjct: 1   MAETSQLIQGIESFVDSTRSPTQQAASLDVIASLLKNNQLTIETLVREMEGYLTTADNII 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       + FFT+RLADW+AL GA+VGCLALLRRK   G
Sbjct: 61  RARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSGG 120

Query: 19  SVTSSE 2
            V+ ++
Sbjct: 121 IVSETD 126


>ref|XP_007024313.1| MMS19 nucleotide excision repair protein, putative isoform 4
           [Theobroma cacao] gi|508779679|gb|EOY26935.1| MMS19
           nucleotide excision repair protein, putative isoform 4
           [Theobroma cacao]
          Length = 1136

 Score =  113 bits (282), Expect = 3e-23
 Identities = 60/126 (47%), Positives = 80/126 (63%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q I+ IE +V S  +P+QQAA +D +A+L+K    T+ETLVREME YLTT D+II
Sbjct: 1   MAETSQLIQGIESFVDSTRSPTQQAASLDVIASLLKNNQLTIETLVREMEGYLTTADNII 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       + FFT+RLADW+AL GA+VGCLALLRRK   G
Sbjct: 61  RARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSGG 120

Query: 19  SVTSSE 2
            V+ ++
Sbjct: 121 IVSETD 126


>ref|XP_007024312.1| MMS19 nucleotide excision repair protein, putative isoform 3
           [Theobroma cacao] gi|508779678|gb|EOY26934.1| MMS19
           nucleotide excision repair protein, putative isoform 3
           [Theobroma cacao]
          Length = 1062

 Score =  113 bits (282), Expect = 3e-23
 Identities = 60/126 (47%), Positives = 80/126 (63%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q I+ IE +V S  +P+QQAA +D +A+L+K    T+ETLVREME YLTT D+II
Sbjct: 1   MAETSQLIQGIESFVDSTRSPTQQAASLDVIASLLKNNQLTIETLVREMEGYLTTADNII 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       + FFT+RLADW+AL GA+VGCLALLRRK   G
Sbjct: 61  RARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSGG 120

Query: 19  SVTSSE 2
            V+ ++
Sbjct: 121 IVSETD 126


>ref|XP_007024310.1| MMS19 nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao] gi|590619491|ref|XP_007024311.1| MMS19
           nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao] gi|508779676|gb|EOY26932.1| MMS19
           nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
           nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao]
          Length = 1149

 Score =  113 bits (282), Expect = 3e-23
 Identities = 60/126 (47%), Positives = 80/126 (63%)
 Frame = -2

Query: 379 MGDSVQWIKHIELYVSSAANPSQQAACVDAVAALIKKGVFTLETLVREMEMYLTTTDSII 200
           M ++ Q I+ IE +V S  +P+QQAA +D +A+L+K    T+ETLVREME YLTT D+II
Sbjct: 1   MAETSQLIQGIESFVDSTRSPTQQAASLDVIASLLKNNQLTIETLVREMEGYLTTADNII 60

Query: 199 RSRGIXXXXXXXXXXXXXXXXXXXXXXXLGFFTERLADWKALHGAIVGCLALLRRKDDVG 20
           R+RGI                       + FFT+RLADW+AL GA+VGCLALLRRK   G
Sbjct: 61  RARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSGG 120

Query: 19  SVTSSE 2
            V+ ++
Sbjct: 121 IVSETD 126


Top