BLASTX nr result

ID: Mentha29_contig00027248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00027248
         (304 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37704.1| hypothetical protein MIMGU_mgv1a006826mg [Mimulus...    88   1e-15
gb|EPS57677.1| hypothetical protein M569_17140 [Genlisea aurea]        83   3e-14
gb|EYU42664.1| hypothetical protein MIMGU_mgv1a008163mg [Mimulus...    77   2e-12
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...    75   7e-12
ref|XP_006346456.1| PREDICTED: polyadenylate-binding protein RBP...    72   1e-10
gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]        71   1e-10
ref|XP_004230808.1| PREDICTED: polyadenylate-binding protein RBP...    67   2e-09
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]            67   2e-09
ref|XP_006349628.1| PREDICTED: polyadenylate-binding protein RBP...    65   8e-09
ref|XP_006349627.1| PREDICTED: polyadenylate-binding protein RBP...    65   8e-09
ref|NP_001275430.1| DNA-binding protein-like [Solanum tuberosum]...    65   1e-08
ref|NP_001275480.1| DNA binding protein ACBF-like [Solanum tuber...    64   2e-08
ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g...    63   4e-08
gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]         59   5e-07
ref|XP_004952707.1| PREDICTED: polyadenylate-binding protein RBP...    59   7e-07
ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [S...    59   7e-07
ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding prote...    58   2e-06
ref|XP_006473363.1| PREDICTED: polyadenylate-binding protein RBP...    56   5e-06
ref|XP_006434827.1| hypothetical protein CICLE_v10001214mg [Citr...    56   5e-06
ref|XP_006434825.1| hypothetical protein CICLE_v10001214mg [Citr...    56   5e-06

>gb|EYU37704.1| hypothetical protein MIMGU_mgv1a006826mg [Mimulus guttatus]
          Length = 430

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/79 (58%), Positives = 50/79 (63%), Gaps = 7/79 (8%)
 Frame = -1

Query: 217 PSMAMQQHMMYNXXXXXXXXXXXXXXXXXQ-------APTLKQSNQIQSGGEDNKTIWIG 59
           P+MAMQQHMMYN                 Q          LKQ+NQIQS  EDNKTIWIG
Sbjct: 40  PAMAMQQHMMYNQQYVPYYHPHQQPPQQQQYQQPPPPPQALKQNNQIQSSAEDNKTIWIG 99

Query: 58  DLQQWMDEGYLQSCFSQSG 2
           DLQQWMD+GYLQSCF+QSG
Sbjct: 100 DLQQWMDDGYLQSCFAQSG 118


>gb|EPS57677.1| hypothetical protein M569_17140 [Genlisea aurea]
          Length = 414

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/72 (56%), Positives = 45/72 (62%)
 Frame = -1

Query: 217 PSMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQSNQIQSGGEDNKTIWIGDLQQWMD 38
           P+M MQ HMMYN                   P  KQ +QIQ+ GEDNKTIWIGDLQQWMD
Sbjct: 46  PAMTMQHHMMYNQHYLPYYHQQYPQQHLLPRPP-KQGSQIQATGEDNKTIWIGDLQQWMD 104

Query: 37  EGYLQSCFSQSG 2
           E YL SCFSQ+G
Sbjct: 105 ENYLHSCFSQTG 116


>gb|EYU42664.1| hypothetical protein MIMGU_mgv1a008163mg [Mimulus guttatus]
          Length = 383

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 39/71 (54%), Positives = 44/71 (61%)
 Frame = -1

Query: 214 SMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQSNQIQSGGEDNKTIWIGDLQQWMDE 35
           +M  QQ MMYN                      KQ++QIQ+ GEDNKTIWIGDLQQWMDE
Sbjct: 38  AMQQQQQMMYNQHYVPYYHQQQPQVQPP-----KQNSQIQNSGEDNKTIWIGDLQQWMDE 92

Query: 34  GYLQSCFSQSG 2
           GYLQ+CFS SG
Sbjct: 93  GYLQTCFSPSG 103


>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
           Short=Poly(A)-binding protein RBP47; AltName:
           Full=RNA-binding protein 47; Short=NplRBP47
           gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
           [Nicotiana plumbaginifolia]
          Length = 428

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/71 (56%), Positives = 43/71 (60%)
 Frame = -1

Query: 214 SMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQSNQIQSGGEDNKTIWIGDLQQWMDE 35
           +MAMQQ MMY                  Q+PT     QIQS  EDNKTIWIGDLQQWMDE
Sbjct: 43  AMAMQQQMMYGQQYMPYYQQHQQQQKMQQSPT-----QIQSSSEDNKTIWIGDLQQWMDE 97

Query: 34  GYLQSCFSQSG 2
            YL SCFSQ+G
Sbjct: 98  SYLHSCFSQAG 108


>ref|XP_006346456.1| PREDICTED: polyadenylate-binding protein RBP47 [Solanum tuberosum]
          Length = 420

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/71 (53%), Positives = 41/71 (57%)
 Frame = -1

Query: 214 SMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQSNQIQSGGEDNKTIWIGDLQQWMDE 35
           +MAMQQ MMY                  Q PT     QIQ+  EDNKTIWIGDLQQWMDE
Sbjct: 42  AMAMQQQMMYGQQYMPYYHQQQQQQKMQQPPT-----QIQNSSEDNKTIWIGDLQQWMDE 96

Query: 34  GYLQSCFSQSG 2
            YL SCFS +G
Sbjct: 97  NYLHSCFSHAG 107


>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
          Length = 482

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 39/72 (54%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -1

Query: 214 SMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQS-NQIQSGGEDNKTIWIGDLQQWMD 38
           +MAMQQ MMY                      ++QS  QIQS  EDNKTIWIGDLQQWMD
Sbjct: 96  AMAMQQQMMYGQQYMPYYQQHQQQQQK-----MQQSPTQIQSSSEDNKTIWIGDLQQWMD 150

Query: 37  EGYLQSCFSQSG 2
           E YL SCFSQ+G
Sbjct: 151 ESYLHSCFSQAG 162


>ref|XP_004230808.1| PREDICTED: polyadenylate-binding protein RBP47-like [Solanum
           lycopersicum]
          Length = 413

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/71 (52%), Positives = 40/71 (56%)
 Frame = -1

Query: 214 SMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQSNQIQSGGEDNKTIWIGDLQQWMDE 35
           +MAMQQ MMY                    PT     QIQ+  EDNKTIWIGDLQQWMDE
Sbjct: 39  AMAMQQQMMYGQQYMPYYHQQKMQQP----PT-----QIQNSSEDNKTIWIGDLQQWMDE 89

Query: 34  GYLQSCFSQSG 2
            YL SCFS +G
Sbjct: 90  SYLHSCFSHAG 100


>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
          Length = 428

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = -1

Query: 103 QIQSGGEDNKTIWIGDLQQWMDEGYLQSCFSQSG 2
           QIQS  EDNKTIWIGDLQQWMDE YL SCFSQ+G
Sbjct: 75  QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAG 108


>ref|XP_006349628.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X2 [Solanum
           tuberosum]
          Length = 424

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = -1

Query: 214 SMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQSNQIQ-SGGEDNKTIWIGDLQQWMD 38
           +M MQQ MMY                       +Q  QIQ +G EDN+TIWIGDLQQWMD
Sbjct: 43  AMVMQQQMMYGQQYMPYYHQQQ-----------QQMIQIQQNGSEDNRTIWIGDLQQWMD 91

Query: 37  EGYLQSCFSQSG 2
           EGYL +CF+Q+G
Sbjct: 92  EGYLHTCFAQAG 103


>ref|XP_006349627.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X1 [Solanum
           tuberosum]
          Length = 428

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = -1

Query: 214 SMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQSNQIQ-SGGEDNKTIWIGDLQQWMD 38
           +M MQQ MMY                       +Q  QIQ +G EDN+TIWIGDLQQWMD
Sbjct: 43  AMVMQQQMMYGQQYMPYYHQQQ-----------QQMIQIQQNGSEDNRTIWIGDLQQWMD 91

Query: 37  EGYLQSCFSQSG 2
           EGYL +CF+Q+G
Sbjct: 92  EGYLHTCFAQAG 103


>ref|NP_001275430.1| DNA-binding protein-like [Solanum tuberosum]
           gi|82621116|gb|ABB86246.1| DNA-binding protein-like
           [Solanum tuberosum]
          Length = 423

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
 Frame = -1

Query: 214 SMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQSNQIQ---SGGEDNKTIWIGDLQQW 44
           +M MQQ MMY                       +Q + IQ   +G EDN+TIWIGDLQQW
Sbjct: 43  AMVMQQQMMYGQQYMPYYHQ-------------QQQHMIQIQQNGSEDNRTIWIGDLQQW 89

Query: 43  MDEGYLQSCFSQSG 2
           MDEGYL +CF+Q+G
Sbjct: 90  MDEGYLHTCFAQAG 103


>ref|NP_001275480.1| DNA binding protein ACBF-like [Solanum tuberosum]
           gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like
           [Solanum tuberosum]
          Length = 372

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 103 QIQSGGEDNKTIWIGDLQQWMDEGYLQSCFSQSG 2
           QIQ+  EDNKTIWIGDLQQWMDE YL SCFS +G
Sbjct: 24  QIQNSSEDNKTIWIGDLQQWMDENYLHSCFSHAG 57


>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
           gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum
           lycopersicum]
          Length = 428

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = -1

Query: 214 SMAMQQHMMYNXXXXXXXXXXXXXXXXXQAPTLKQSNQIQ-SGGEDNKTIWIGDLQQWMD 38
           +M MQQ MMY                       +Q  QIQ +  EDN+TIWIGDLQQWMD
Sbjct: 43  AMVMQQQMMYGQQYMPYYHQQH-----------QQMIQIQQNASEDNRTIWIGDLQQWMD 91

Query: 37  EGYLQSCFSQSG 2
           EGYL +CF+Q+G
Sbjct: 92  EGYLHTCFAQAG 103


>gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
          Length = 430

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = -1

Query: 94  SGGEDNKTIWIGDLQQWMDEGYLQSCFSQSG 2
           +GGEDN+TIW+GDLQ WMDE YL SCF  SG
Sbjct: 98  NGGEDNRTIWVGDLQYWMDENYLHSCFGSSG 128


>ref|XP_004952707.1| PREDICTED: polyadenylate-binding protein RBP47C'-like [Setaria
           italica]
          Length = 428

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = -1

Query: 94  SGGEDNKTIWIGDLQQWMDEGYLQSCFSQSG 2
           +GGEDN+TIW+GDLQ WMDE YL SCF  SG
Sbjct: 98  NGGEDNRTIWVGDLQYWMDENYLHSCFGPSG 128


>ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
           gi|241932144|gb|EES05289.1| hypothetical protein
           SORBIDRAFT_04g023540 [Sorghum bicolor]
          Length = 435

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = -1

Query: 94  SGGEDNKTIWIGDLQQWMDEGYLQSCFSQSG 2
           +GGEDN+TIW+GDLQ WMDE YL SCF  SG
Sbjct: 103 NGGEDNRTIWVGDLQYWMDENYLHSCFGPSG 133


>ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Brachypodium distachyon]
          Length = 421

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -1

Query: 94  SGGEDNKTIWIGDLQQWMDEGYLQSCFSQSG 2
           +GG+DN+TIW+GDLQ WMDE YL SCF  SG
Sbjct: 93  NGGDDNRTIWVGDLQYWMDENYLHSCFGPSG 123


>ref|XP_006473363.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Citrus
           sinensis]
          Length = 433

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
 Frame = -1

Query: 124 PTLKQSNQIQ---SGGEDNKTIWIGDLQQWMDEGYLQSCFSQSG 2
           P L+   Q Q   SGG +NKTIW+GDL  WMDE YL SCF+ +G
Sbjct: 74  PHLQHQQQQQHQGSGGGENKTIWVGDLHHWMDENYLHSCFASTG 117


>ref|XP_006434827.1| hypothetical protein CICLE_v10001214mg [Citrus clementina]
           gi|557536949|gb|ESR48067.1| hypothetical protein
           CICLE_v10001214mg [Citrus clementina]
          Length = 432

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
 Frame = -1

Query: 124 PTLKQSNQIQ---SGGEDNKTIWIGDLQQWMDEGYLQSCFSQSG 2
           P L+   Q Q   SGG +NKTIW+GDL  WMDE YL SCF+ +G
Sbjct: 73  PHLQHQQQQQHQGSGGGENKTIWVGDLHHWMDENYLHSCFASTG 116


>ref|XP_006434825.1| hypothetical protein CICLE_v10001214mg [Citrus clementina]
           gi|567884539|ref|XP_006434828.1| hypothetical protein
           CICLE_v10001214mg [Citrus clementina]
           gi|557536947|gb|ESR48065.1| hypothetical protein
           CICLE_v10001214mg [Citrus clementina]
           gi|557536950|gb|ESR48068.1| hypothetical protein
           CICLE_v10001214mg [Citrus clementina]
          Length = 289

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
 Frame = -1

Query: 124 PTLKQSNQIQ---SGGEDNKTIWIGDLQQWMDEGYLQSCFSQSG 2
           P L+   Q Q   SGG +NKTIW+GDL  WMDE YL SCF+ +G
Sbjct: 73  PHLQHQQQQQHQGSGGGENKTIWVGDLHHWMDENYLHSCFASTG 116


Top