BLASTX nr result
ID: Mentha29_contig00027101
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00027101
(370 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU22111.1| hypothetical protein MIMGU_mgv1a000730mg [Mimulus... 117 2e-24
ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-li... 82 1e-13
ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-li... 82 1e-13
gb|EYU22987.1| hypothetical protein MIMGU_mgv1a0010611mg, partia... 75 1e-11
ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Popu... 75 1e-11
ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-li... 74 3e-11
ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Caps... 70 3e-10
gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis] 69 9e-10
ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prun... 67 2e-09
ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma ca... 67 3e-09
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li... 66 4e-09
emb|CBI24290.3| unnamed protein product [Vitis vinifera] 66 4e-09
ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-li... 62 8e-08
ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citr... 62 8e-08
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi... 62 8e-08
ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis ... 62 1e-07
ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-li... 60 2e-07
ref|XP_007132512.1| hypothetical protein PHAVU_011G100500g [Phas... 60 3e-07
ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [A... 60 3e-07
ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-li... 59 7e-07
>gb|EYU22111.1| hypothetical protein MIMGU_mgv1a000730mg [Mimulus guttatus]
Length = 1000
Score = 117 bits (293), Expect = 2e-24
Identities = 62/96 (64%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Frame = +1
Query: 55 MSQDIRKWFINKHAKDKGNGDASKQAKPSTPEKPP--VVQGVNESSSRRKTSKYFAKDAQ 228
MSQDIRKWF+ KH KD GNG AS QAKPSTPEK P +V+ V E S RRKTSKYFAKD Q
Sbjct: 1 MSQDIRKWFMKKHEKDSGNGSASNQAKPSTPEKRPGKMVEEVQELSGRRKTSKYFAKDGQ 60
Query: 229 GVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 336
GVKDEM+VE+ KK T +N KPP+ K+T K
Sbjct: 61 GVKDEMDVEEAPAKK--TAKELVSNVKPPTGKRTLK 94
>ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Solanum
tuberosum]
Length = 992
Score = 81.6 bits (200), Expect = 1e-13
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASKQA---KPS--TPEKPPVVQGVNESSSRRKTSKYFAKDAQ 228
DIRKWF+ +H K GNG SK + KPS +P+ +VQ E+++RRKTSKYFA D
Sbjct: 3 DIRKWFMKQHDKGTGNGSMSKNSAAEKPSLISPKPENLVQEGQETTNRRKTSKYFATDKV 62
Query: 229 GVKDEMEVEQVSEKKAQ-TGSTGSANAKPPSVKKTHK 336
K+E E +++KAQ T + SAN +PP+ KK HK
Sbjct: 63 KAKEEKVEEVSAKRKAQSTAGSSSANERPPAAKKIHK 99
>ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Solanum
tuberosum]
Length = 993
Score = 81.6 bits (200), Expect = 1e-13
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASKQA---KPS--TPEKPPVVQGVNESSSRRKTSKYFAKDAQ 228
DIRKWF+ +H K GNG SK + KPS +P+ +VQ E+++RRKTSKYFA D
Sbjct: 3 DIRKWFMKQHDKGTGNGSMSKNSAAEKPSLISPKPENLVQEGQETTNRRKTSKYFATDKV 62
Query: 229 GVKDEMEVEQVSEKKAQ-TGSTGSANAKPPSVKKTHK 336
K+E E +++KAQ T + SAN +PP+ KK HK
Sbjct: 63 KAKEEKVEEVSAKRKAQSTAGSSSANERPPAAKKIHK 99
>gb|EYU22987.1| hypothetical protein MIMGU_mgv1a0010611mg, partial [Mimulus
guttatus]
Length = 106
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/92 (46%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +1
Query: 82 INKHAKDKGNGDASKQAKPSTPEKPPVV-------QGVNESSSRRKTSKYFAKDAQGVKD 240
+ KH KD GN AS QAKPSTPEK P V + + KTSKYFA D GVKD
Sbjct: 1 MKKHEKDSGNSSASNQAKPSTPEKSPAVAPRPGKMKKFKNYLAEGKTSKYFATDGPGVKD 60
Query: 241 EMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 336
+++VE+ KK T +N KPP+ K T K
Sbjct: 61 DVDVEEAPAKK--TAKELVSNVKPPTGKSTLK 90
>ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Populus trichocarpa]
gi|550347876|gb|EEE82965.2| hypothetical protein
POPTR_0001s22140g [Populus trichocarpa]
Length = 981
Score = 74.7 bits (182), Expect = 1e-11
Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Frame = +1
Query: 55 MSQDIRKWFINKHAKDKGNGDASKQAK----PSTPEKPPVVQGVNESSSRRKTSKYFAKD 222
M +DIRKWF+ H DKGN +A+ A+ P+ P+ V G E S RRKTSKYFA +
Sbjct: 1 MQRDIRKWFMKAH--DKGNDNAATNAEKKPPPTEPKTETPVCGGQEGSGRRKTSKYFAAN 58
Query: 223 AQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKKTHK 336
Q K++ E+E + +++KAQ + G + KPP KK HK
Sbjct: 59 KQKQKEDKEIEDLPAKRKAQ--NDGVQSVKPPPSKKVHK 95
>ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-like [Solanum
lycopersicum]
Length = 1012
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASKQA-----KPSTPEKPPVVQGVNESSSRRKTSKYFAKDAQ 228
DIRKWF+ +H K GNG SK + P++P+ +VQ E+++RRKTSKYFA D
Sbjct: 3 DIRKWFMKQHDKGTGNGSMSKNSAAEKPSPTSPKPENLVQEGQETANRRKTSKYFATDKV 62
Query: 229 GVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 336
K+E +VE+VS K+ + G ++A P+ K+ HK
Sbjct: 63 KAKEE-KVEEVSAKRKAPNAAGISSA--PAAKRIHK 95
>ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Capsella rubella]
gi|482555714|gb|EOA19906.1| hypothetical protein
CARUB_v10000156mg [Capsella rubella]
Length = 953
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASKQ------AKPSTPEKPPVVQGVNESSSRRKTSKYFAKDA 225
DIRKWF+ H DKGNG A K A + P KP ++++RRKTSKYF KD
Sbjct: 3 DIRKWFMKAH--DKGNGSAPKSTGAVKNAAETAPIKPEQASEDLDTAARRKTSKYFGKDK 60
Query: 226 QGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKK 327
VKDE EVE++ +++K +T S + A+P V K
Sbjct: 61 TKVKDEKEVEELPAKRKLKTESDDLSKARPRKVTK 95
>gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]
Length = 1047
Score = 68.6 bits (166), Expect = 9e-10
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Frame = +1
Query: 55 MSQ-DIRKWFINKHAKDKGNGDASKQAKPST--PEKPPVVQGVNESSSRRKTSKYFAKDA 225
MSQ DIRKWF+ H K GN ASK AK + PE+P VQG ++S RRKTSKYF+ A
Sbjct: 85 MSQSDIRKWFMKSHEKGNGNS-ASKPAKSAQALPEEP--VQGSQDNSGRRKTSKYFS--A 139
Query: 226 QGVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 336
+ KDE E+ +V K+ +T + KP KK HK
Sbjct: 140 EKPKDEKEMVEVPVKR-KTQTDSHEMVKPSPAKKIHK 175
>ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
gi|462394403|gb|EMJ00202.1| hypothetical protein
PRUPE_ppa000922mg [Prunus persica]
Length = 961
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/94 (42%), Positives = 48/94 (51%)
Frame = +1
Query: 55 MSQDIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGVNESSSRRKTSKYFAKDAQGV 234
M DIRKWF+ H DKGNG K+ P+T + P V G E+ RRKTSKYF D
Sbjct: 1 MHADIRKWFMKSH--DKGNG---KKPAPTTSQTPSTVHGGQENPGRRKTSKYFTTDKPKA 55
Query: 235 KDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 336
+ E EV K +T + KP KK HK
Sbjct: 56 EKETEV----PAKRKTHKEPDESVKPSPAKKVHK 85
>ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma cacao]
gi|508727448|gb|EOY19345.1| Replication factor C subunit
1 [Theobroma cacao]
Length = 1012
Score = 67.0 bits (162), Expect = 3e-09
Identities = 39/87 (44%), Positives = 46/87 (52%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGVNESSSRRKTSKYFAKDAQGVKDE 243
DIRKWF+ H DKG G+ASK A P+ P V G E+S RRKTSKYF Q K E
Sbjct: 3 DIRKWFMKAH--DKGKGNASKPANPA-PTNTDSVPGGRENSGRRKTSKYFPAGKQQPKGE 59
Query: 244 MEVEQVSEKKAQTGSTGSANAKPPSVK 324
E++ K+ S PPS K
Sbjct: 60 QGTEELPAKRKVQNENESVEKPPPSKK 86
>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
Length = 933
Score = 66.2 bits (160), Expect = 4e-09
Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNG--------DASKQAKPS--TPEKPPVVQGVNESSSRRKTSKYF 213
DIRKWF+ KH D GN AS+ KPS T ++ V G ESS RRKTSKYF
Sbjct: 7 DIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKYF 66
Query: 214 AKDAQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKKTHK 336
K KDE E+E++ +++K Q G+ S N PP KK +
Sbjct: 67 QKP----KDEKEMEELPAKRKTQKGTKESLN--PPPSKKIRR 102
>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
Length = 941
Score = 66.2 bits (160), Expect = 4e-09
Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNG--------DASKQAKPS--TPEKPPVVQGVNESSSRRKTSKYF 213
DIRKWF+ KH D GN AS+ KPS T ++ V G ESS RRKTSKYF
Sbjct: 7 DIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKYF 66
Query: 214 AKDAQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKKTHK 336
K KDE E+E++ +++K Q G+ S N PP KK +
Sbjct: 67 QKP----KDEKEMEELPAKRKTQKGTKESLN--PPPSKKIRR 102
>ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Citrus
sinensis] gi|568869228|ref|XP_006487830.1| PREDICTED:
replication factor C subunit 1-like isoform X2 [Citrus
sinensis]
Length = 958
Score = 62.0 bits (149), Expect = 8e-08
Identities = 39/96 (40%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +1
Query: 55 MSQDIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGV--NESSSRRKTSKYFAKDAQ 228
M QDIRKWF+ H+KDK N S E G +ES RRKTSKYFA D Q
Sbjct: 1 MPQDIRKWFLKPHSKDKDNATIPANTALSNLETTNSEPGCGGHESMGRRKTSKYFATDKQ 60
Query: 229 GVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 336
+D E E++ K+ G + P +KK HK
Sbjct: 61 KPEDGGEKEELPAKRKAKKDDGKSVRSSP-LKKFHK 95
>ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citrus clementina]
gi|557525989|gb|ESR37295.1| hypothetical protein
CICLE_v10027762mg [Citrus clementina]
Length = 958
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Frame = +1
Query: 55 MSQDIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGV--NESSSRRKTSKYFAKDAQ 228
M QDIRKWF+ H+KDK N S E G +ES RRKTSKYFA D Q
Sbjct: 1 MPQDIRKWFLKPHSKDKDNATIPANTALSNLETTNSEPGCGGHESMGRRKTSKYFATDKQ 60
Query: 229 GVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKKTHK 336
+D E E++ +++KA+ S + P +KK HK
Sbjct: 61 KPEDGGEKEELPAKRKAEKDDGKSVRSSP--LKKFHK 95
>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
Full=Replication factor C subunit 1; Short=AtRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
replication factor C large subunit-like protein
[Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
At5g22010 [Arabidopsis thaliana]
gi|332005585|gb|AED92968.1| replication factor C1
[Arabidopsis thaliana]
Length = 956
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASKQ----------AKPSTPEKPPVVQGVNESSSRRKTSKYF 213
DIRKWF+ H +KGNG A K A + P K E++ RRKTSKYF
Sbjct: 3 DIRKWFMKAH--EKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYF 60
Query: 214 AKDAQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKK 327
KD VKDE EVE + +++K +T S +P V K
Sbjct: 61 GKDKTKVKDEKEVEAIPAKRKLKTESDDLVKPRPRKVTK 99
>ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319877|gb|EFH50299.1| AAA-type ATPase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 960
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASKQ----------AKPSTPEKPPVVQGVNESSSRRKTSKYF 213
DIRKWF+ H +KGN A K A + P K E+++RRKTSK+F
Sbjct: 3 DIRKWFMKAH--EKGNASAPKSTSSKAGPARNAAETAPLKSEQASEDLETAARRKTSKFF 60
Query: 214 AKDAQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKK 327
KD VKDE EVE++ +++K +T S A +P V K
Sbjct: 61 GKDKTKVKDEKEVEEIPAKRKLKTDSDDLAKPRPRKVTK 99
>ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
Length = 938
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/70 (45%), Positives = 40/70 (57%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGVNESSSRRKTSKYFAKDAQGVKDE 243
DIRKWF+ H DKGN AS + P+ V G ESS RR TSKYF + Q KDE
Sbjct: 3 DIRKWFMKTH--DKGNNAASSKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNKQKGKDE 60
Query: 244 MEVEQVSEKK 273
E +++ K+
Sbjct: 61 KEKQELPAKR 70
>ref|XP_007132512.1| hypothetical protein PHAVU_011G100500g [Phaseolus vulgaris]
gi|561005512|gb|ESW04506.1| hypothetical protein
PHAVU_011G100500g [Phaseolus vulgaris]
Length = 938
Score = 60.1 bits (144), Expect = 3e-07
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDA----SKQAKPSTPEKPPV--VQGVNESSSRRKTSKYFAKDA 225
DIRKWF+ H DKGN A S Q KPS+ + P V G ESS RR TSKYF +
Sbjct: 3 DIRKWFMKSH--DKGNNAAPSKPSNQPKPSSDKPQPEKNVAGGQESSGRRVTSKYFNTNK 60
Query: 226 QGVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 336
Q VK+E E +++ K+ + P K+ H+
Sbjct: 61 QKVKEEKETQELPAKRKNVKDSEDT----PEPKRVHE 93
>ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [Amborella trichopoda]
gi|548830733|gb|ERM93656.1| hypothetical protein
AMTR_s00004p00160120 [Amborella trichopoda]
Length = 725
Score = 60.1 bits (144), Expect = 3e-07
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASKQAKPST----PEKPPVVQGVNESSSRRKTSKYFAKDAQG 231
DIRKWF+ +H DKGNG +S+ +KP+T P KP V + +RRKTSKYFA
Sbjct: 3 DIRKWFMKQH--DKGNGASSQPSKPATTVSQPSKPSSVT-EEKKETRRKTSKYFATAPPE 59
Query: 232 VK--DEMEVEQVSE-----KKAQTGSTGSANAKPPSVKKTHK 336
K +E E+ S KK T S KPP+ KK ++
Sbjct: 60 KKQGEEKNTEKSSPVKRKIKKVGTDEDYSDEIKPPTAKKINR 101
>ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Glycine
max]
Length = 947
Score = 58.9 bits (141), Expect = 7e-07
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Frame = +1
Query: 64 DIRKWFINKHAKDKGNGDASK----QAKPST--PEKPPVVQGVNESSSRRKTSKYFAKDA 225
DIRKWF+ H DKGN AS Q KPS+ P+ V G ESS RR TSKYF +
Sbjct: 3 DIRKWFMKTH--DKGNNAASSKPSNQPKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNK 60
Query: 226 QGVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 336
Q KD+ E++++ K+ + + P KK H+
Sbjct: 61 QKGKDKKEMQELPAKRKNM----KDSEEIPEPKKIHE 93