BLASTX nr result

ID: Mentha29_contig00027035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00027035
         (325 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    67   3e-09
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670...    64   2e-08
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668...    61   1e-07
ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605...    61   2e-07
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    60   2e-07
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...    60   3e-07
ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, part...    59   5e-07
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...    59   9e-07
ref|XP_006366616.1| PREDICTED: uncharacterized protein LOC102598...    58   2e-06
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06
ref|XP_003622267.1| hypothetical protein MTR_7g032250 [Medicago ...    57   4e-06
gb|ABA99487.1| retrotransposon protein, putative, unclassified [...    56   6e-06
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606...    56   6e-06
ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844...    55   8e-06

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = -1

Query: 325  LRTQGVIQPWKKAIWKNFIPPKLSFISWLAFKEKLRTNDHL--YYLDIDYACYQCTV-PE 155
            +R QG+++ W KAIW +   PK +FISWLA  ++L T D +  +   I   C  C +  E
Sbjct: 1230 IREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAE 1289

Query: 154  SSKHLFLKCGFSSGIW 107
            S  HLF  C FSS IW
Sbjct: 1290 SRDHLFFSCNFSSHIW 1305


>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
          Length = 383

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
 Frame = -1

Query: 298 WKKAIWKNFIPPKLSFISWLAFKEKLRTNDHLYYLDIDYACYQCT-VPESSKHLFLKCGF 122
           W   IW   IP K+SFI WLA K +L   D   +L+  + C  CT   ES  HLF  C  
Sbjct: 287 WSSIIWNPVIPSKMSFILWLATKNRLLALDRAAFLNKGFLCPLCTNEAESHAHLFFSCRT 346

Query: 121 SSGIWGDIRLWLQIPQNLTTLLSAAKWIKKDRAANHV 11
           S  +W  IR W+ + +   +L  +   + + RA + V
Sbjct: 347 SLRVWAHIRDWIPLKRQSISLQHSISALIRRRATSGV 383


>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
          Length = 477

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = -1

Query: 298 WKKAIWKNFIPPKLSFISWLAFKEKLRTNDHLYYLDIDYACYQC-TVPESSKHLFLKCGF 122
           W   +W   IP K+SFI WLA K  L T D   +L+    C  C T  +S  HLF  C  
Sbjct: 316 WNSVVWNPAIPSKMSFILWLATKNHLLTLDRAAFLNKGLLCPLCRTKAKSHAHLFFSCRI 375

Query: 121 SSGIWGDIRLWLQIPQNLTTL 59
           S  +W +IR W+ + +   +L
Sbjct: 376 SLQVWANIRDWIPLHRQTISL 396


>ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605115 [Solanum tuberosum]
          Length = 201

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
 Frame = -1

Query: 301 PWKKAIWKNFIPPKLSFISWLAFKEKLRTNDHL--YYLDIDYACYQCTVP-ESSKHLFLK 131
           PWK  +++NF  PK  F  WL  + +L T D L  + LDI+  C  C +  ES  H++ +
Sbjct: 41  PWKCLMFQNFARPKAVFTMWLQLQNRLNTTDRLKKWGLDIELKCVLCRLHLESRDHMYTR 100

Query: 130 CGFSSGIWGDIRLWLQIPQ 74
           C +S  +W  +  W+Q  Q
Sbjct: 101 CPYSQQVWSKLLQWIQFVQ 119


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 18/99 (18%)
 Frame = -1

Query: 325 LRTQGVIQPWKKAIWKNFIPPKLSFISWLAFKEKLRTNDHL--YYLDIDYACYQC-TVPE 155
           L   GV+ PW+K++W     PK +FI W+A  ++L T D L  + L+I   C  C  V E
Sbjct: 145 LNPDGVLVPWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDE 204

Query: 154 SSKHLFLKCGFSSGIW---------------GDIRLWLQ 83
           +  HLF +C FS+ IW               G I LWL+
Sbjct: 205 THDHLFFQCQFSNEIWSFFMIRAGMTPPHLFGPILLWLK 243


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = -1

Query: 322  RTQGVIQPWKKAIWKNFIPPKLSFISWLAFKEKLRTNDH--LYYLDIDYACYQC-TVPES 152
            RT G+  PW K +W     PK SF  WLA  ++L T D   L+   +   C  C    ES
Sbjct: 1274 RTMGIEVPWHKGVWFTHSTPKFSFCVWLAVYDRLSTGDKMLLWNRGLQGTCLLCRNATES 1333

Query: 151  SKHLFLKCGFSSGIW 107
              HLF  C FSS +W
Sbjct: 1334 RDHLFFSCSFSSEVW 1348


>ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, partial [Populus
           trichocarpa] gi|550329025|gb|ERP55952.1| hypothetical
           protein POPTR_0010s04250g, partial [Populus trichocarpa]
          Length = 112

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = -1

Query: 298 WKKAIWKNFIPPKLSFISWLAFKEKLRTNDHLYYLDIDYACYQC-TVPESSKHLFLKCGF 122
           W   +W+ +  P+ +F  WL    KLRT D L ++  D     C    ES  HLF  C +
Sbjct: 29  WASVVWEQWFLPRHNFSLWLL--GKLRTRDRLQFISTDPLYPLCHNSSESHAHLFFSCAW 86

Query: 121 SSGIWGDIRLWLQIPQNLTTL 59
           SS +WG  R WL+   ++ TL
Sbjct: 87  SSSLWGKARYWLEFHSSMPTL 107


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
 Frame = -1

Query: 325 LRTQGVIQPWKKAIWKNFIPPKLSFISWLAFKEKLRTNDHL--YYLDIDYACYQCTVPES 152
           L+  G  + WK  ++ N   P+ +FI WLA   +L T D L  Y +  D +C  C+  ES
Sbjct: 334 LQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFCSEEES 393

Query: 151 SKHLFLKCGFSSGIWGDIRLWLQIPQNLTTLLSAAKWI 38
             HLF  C  S  +W ++  W+QI  + +   +   W+
Sbjct: 394 MNHLFFVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWL 431


>ref|XP_006366616.1| PREDICTED: uncharacterized protein LOC102598485 [Solanum tuberosum]
          Length = 189

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
 Frame = -1

Query: 301 PWKKAIWKNFIPPKLSFISWLAFKEKLRTNDHL--YYLDIDYACYQCTVP-ESSKHLFLK 131
           PWK  +++NF  PK  F  WL  + +L T D L  + LDI+  C  C +  E   H++  
Sbjct: 41  PWKCLMFQNFARPKAVFTMWLQLQNRLNTTDRLKKWGLDIELKCVLCQLHFEFRDHMYTS 100

Query: 130 CGFSSGIWGDIRLWLQIPQ 74
           C +S  +W  +  W+Q  Q
Sbjct: 101 CPYSQQVWSKLLQWIQFVQ 119


>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = -1

Query: 325  LRTQGVIQPWKKAIWKNFIPPKLSFISWLAFKEKLRTNDHLYYLDI----DYACYQCT-V 161
            L+ Q  I+ W + +W+  IPP++   SW+A   KL +   L  L+I    D  C  C   
Sbjct: 1040 LKPQSKIRIWGR-LWRGLIPPRIEVFSWVALLGKLNSRQKLATLNIIPPDDAVCIMCNGA 1098

Query: 160  PESSKHLFLKCGFSSGIW 107
            PE+S HL L C F+S IW
Sbjct: 1099 PETSDHLLLHCPFASSIW 1116


>ref|XP_003622267.1| hypothetical protein MTR_7g032250 [Medicago truncatula]
           gi|355497282|gb|AES78485.1| hypothetical protein
           MTR_7g032250 [Medicago truncatula]
          Length = 202

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
 Frame = -1

Query: 286 IWKNFIPPKLSFISWLAFKEKLRTNDHLYYLDI----DYACYQ-CTVPESSKHLFLKCGF 122
           IW N +P K+S ++W   +++L T   L + DI    D +C   C   ES++HLFL C  
Sbjct: 98  IWHNQVPSKVSILAWRLLRDRLPTKSKLLHRDIIQADDSSCVAGCGFLESAQHLFLTCDC 157

Query: 121 SSGIWGDIRLWLQI 80
              +W  +RLWL I
Sbjct: 158 FGSLWQHVRLWLGI 171


>gb|ABA99487.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1627

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
 Frame = -1

Query: 316  QGVIQPWKKAIWKNFIPPKLSFISWLAFKEKLRTNDHLY---YLDIDYACYQCTVPESSK 146
            QG+  P+KK +WK   PP++   SWL  +  + T D+L+   +      C  C   ES +
Sbjct: 1461 QGINYPYKK-MWKIKAPPRVKVFSWLVLRNSILTKDNLFKRGWRKGSIKCQFCDKSESIQ 1519

Query: 145  HLFLKCGFSSGIWGDIRLWLQIPQNLTTLLSAAKWIKKDRAANHVLI 5
            HLFL C  +  IW  +   L +          + WI K    N  LI
Sbjct: 1520 HLFLDCPMAHFIWSVVECTLNVKPGRNVGEMFSSWILKFGKGNGKLI 1566


>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
           orf147a [Beta vulgaris subsp. vulgaris]
          Length = 147

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = -1

Query: 277 NFIPPKLSFISWLAFKEKLRTNDHLYYLDI--DYACYQC-TVPESSKHLFLKCGFSSGIW 107
           NF PPK +FI+WL   ++L T D L    I  D  C  C  V E+  HLF  C FS  IW
Sbjct: 8   NFSPPKCTFITWLTILDRLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFFVCEFSYEIW 67

Query: 106 GDIRLWLQI 80
             +  WL I
Sbjct: 68  SSLLCWLGI 76


>ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844973 [Brachypodium
           distachyon]
          Length = 448

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
 Frame = -1

Query: 292 KAIWKNFIPPKLSFISWLAFKEKLRTNDHLYYLDIDYA--CYQCTV-PESSKHLFLKCGF 122
           + IW  +  PK  F +WLA + +L TND L      +   C  C V PE++ HL   C +
Sbjct: 289 RLIWSPWALPKCRFFAWLAIQNRLWTNDRLAARGWPHQPLCKLCGVCPETAAHLLFDCRY 348

Query: 121 SSGIWGDIRLWLQI-----PQNLTTLLSAAKW 41
           S  IW  + +W+ +     P N+T     ++W
Sbjct: 349 SKRIWSGVSVWIDVPALLYPDNVTADTVGSRW 380


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