BLASTX nr result

ID: Mentha29_contig00026307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00026307
         (332 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006405802.1| hypothetical protein EUTSA_v10028087mg [Eutr...    64   2e-08
ref|XP_006293129.1| hypothetical protein CARUB_v10019435mg [Caps...    58   1e-06
ref|XP_006391417.1| hypothetical protein EUTSA_v10019697mg, part...    57   3e-06

>ref|XP_006405802.1| hypothetical protein EUTSA_v10028087mg [Eutrema salsugineum]
           gi|557106940|gb|ESQ47255.1| hypothetical protein
           EUTSA_v10028087mg [Eutrema salsugineum]
          Length = 162

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = -1

Query: 293 LGRNVETLAAALEDLRLTVTAAFPRRRNTTIPPHGHRGDDLFLSDDESDTLLNVNPF--- 123
           L  ++ T+ AAL       T   P+     +P    R + +F  D E D  +  N F   
Sbjct: 29  LWESLRTMEAALR------TVLQPQNAAQRVP---RREEPIFEDDKEEDVNVFANQFGQH 79

Query: 122 APPQRGDARRWELGFKLDIPKFRGTLDPSDFLDWINAVD 6
           APP  GD RRW+ GFKLD+P+F G + P +FLDWIN  +
Sbjct: 80  APP--GDHRRWKAGFKLDLPEFSGGIQPEEFLDWINTTE 116


>ref|XP_006293129.1| hypothetical protein CARUB_v10019435mg [Capsella rubella]
           gi|482561836|gb|EOA26027.1| hypothetical protein
           CARUB_v10019435mg [Capsella rubella]
          Length = 595

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 16/108 (14%)
 Frame = -1

Query: 278 ETLAAALEDLRLTVTAAFPRRRNTTIPPHGHRGDDLFLSDDESDTLLNVNPFAPPQRGD- 102
           +TL     +L+  +  A      T +     + DD    D E+D  ++ N FA P + D 
Sbjct: 156 QTLTTFTMELKAALQEAVQTALQTVLQQQHQQRDD---HDAETDEEIHENLFANPLQQDR 212

Query: 101 ---------------ARRWELGFKLDIPKFRGTLDPSDFLDWINAVDE 3
                          A RWE GFKLDIP+F G+L   +FLDW+N V+E
Sbjct: 213 DQRIQLCHNNQRNNMATRWESGFKLDIPEFSGSLKAEEFLDWLNVVEE 260


>ref|XP_006391417.1| hypothetical protein EUTSA_v10019697mg, partial [Eutrema
           salsugineum] gi|557087851|gb|ESQ28703.1| hypothetical
           protein EUTSA_v10019697mg, partial [Eutrema salsugineum]
          Length = 168

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
 Frame = -1

Query: 323 DARRDADIAQLGRNVETLAAALEDLRLTVTAAFPRRRNTTIPPHG-HRGDDLFLSDDESD 147
           D R +  + +      TL A  E+++ T+T +      T +     HR        DE  
Sbjct: 12  DVRNEESVNEWAELRRTLLAMQENIQATITTSIQELAETVLNHREQHRQQQSSQGSDEES 71

Query: 146 TLLNVNPFAPPQ------------RGDARRWELGFKLDIPKFRGTLDPSDFLDWINAVDE 3
               VNPFA  Q            RGD R WE  FK++IP+F G     + LDW+ AVDE
Sbjct: 72  VDSRVNPFARDQQRRQRVGDRGFDRGD-RNWESSFKVEIPEFHGGARGDELLDWLVAVDE 130


Top