BLASTX nr result

ID: Mentha29_contig00025406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00025406
         (224 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU19293.1| hypothetical protein MIMGU_mgv1a017958mg [Mimulus...    59   6e-10
gb|EYU40957.1| hypothetical protein MIMGU_mgv11b022113mg [Mimulu...    51   6e-07
ref|XP_002519901.1| pentatricopeptide repeat-containing protein,...    54   3e-06
ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containi...    48   6e-06

>gb|EYU19293.1| hypothetical protein MIMGU_mgv1a017958mg [Mimulus guttatus]
          Length = 383

 Score = 59.3 bits (142), Expect(2) = 6e-10
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = +1

Query: 1   TMLQALFHEGRYDEGLKLFREMKARHVAPDKRT*NILLHGLCRGHRLDEAFSF 159
           TM+  LF EGR+ +G KLF +M+AR V P   T NIL+  LCR H++ EAFSF
Sbjct: 183 TMIHGLFSEGRFADGWKLFNDMEARQVHPGLFTYNILMDVLCRTHQIAEAFSF 235



 Score = 30.0 bits (66), Expect(2) = 6e-10
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +3

Query: 156 FLNVMENEGSAPSIVTFNILV 218
           FL VMEN+G  P I+T+ IL+
Sbjct: 235 FLRVMENKGLNPDIITYGILI 255


>gb|EYU40957.1| hypothetical protein MIMGU_mgv11b022113mg [Mimulus guttatus]
          Length = 233

 Score = 51.2 bits (121), Expect(2) = 6e-07
 Identities = 27/53 (50%), Positives = 33/53 (62%)
 Frame = +1

Query: 1   TMLQALFHEGRYDEGLKLFREMKARHVAPDKRT*NILLHGLCRGHRLDEAFSF 159
           TM+  LF EGR  +G KLF  M+AR V P   T NIL+  LC   ++ EAFSF
Sbjct: 60  TMIHGLFSEGRIADGWKLFNHMEARKVHPSICTYNILMECLCGTRKIVEAFSF 112



 Score = 27.7 bits (60), Expect(2) = 6e-07
 Identities = 9/21 (42%), Positives = 19/21 (90%)
 Frame = +3

Query: 156 FLNVMENEGSAPSIVTFNILV 218
           F+ VME++G +P+I+T++I++
Sbjct: 112 FVRVMEDKGVSPNIITYDIVI 132


>ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540947|gb|EEF42505.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 777

 Score = 53.9 bits (128), Expect(2) = 3e-06
 Identities = 26/53 (49%), Positives = 36/53 (67%)
 Frame = +1

Query: 1   TMLQALFHEGRYDEGLKLFREMKARHVAPDKRT*NILLHGLCRGHRLDEAFSF 159
           TM+ A    GR D+ ++LFR+M+   VAP+  T N ++HGLC+  RLDEAF F
Sbjct: 202 TMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQF 254



 Score = 22.7 bits (47), Expect(2) = 3e-06
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 156 FLNVMENEGSAPSIVTFNILV 218
           F   ME E   PS+VT+ +L+
Sbjct: 254 FKEKMEKERVKPSLVTYGVLI 274


>ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like isoform X1 [Glycine max]
           gi|571476386|ref|XP_006586943.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X2 [Glycine max]
           gi|571476388|ref|XP_006586944.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X3 [Glycine max]
           gi|571476390|ref|XP_006586945.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X4 [Glycine max]
           gi|571476393|ref|XP_006586946.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X5 [Glycine max]
           gi|571476395|ref|XP_006586947.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X6 [Glycine max]
          Length = 642

 Score = 48.1 bits (113), Expect(2) = 6e-06
 Identities = 21/51 (41%), Positives = 35/51 (68%)
 Frame = +1

Query: 4   MLQALFHEGRYDEGLKLFREMKARHVAPDKRT*NILLHGLCRGHRLDEAFS 156
           +++A+   G  D+ +++FRE+  R+ APD  T + L+HGLC+  R+DEA S
Sbjct: 176 VIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVS 226



 Score = 27.3 bits (59), Expect(2) = 6e-06
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 147 SIFFLNVMENEGSAPSIVTFNILVGA 224
           ++  L+ M+ EG+ P++V FN+L+ A
Sbjct: 224 AVSLLDEMQVEGTFPNLVAFNVLISA 249


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