BLASTX nr result
ID: Mentha29_contig00024876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00024876
(641 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 63 7e-08
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 62 1e-07
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 62 1e-07
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 62 1e-07
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 62 2e-07
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 61 3e-07
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 60 4e-07
gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thali... 60 7e-07
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 59 1e-06
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera] 57 4e-06
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 57 4e-06
emb|CAN66898.1| hypothetical protein VITISV_037436 [Vitis vinifera] 57 6e-06
emb|CAN65235.1| hypothetical protein VITISV_040876 [Vitis vinifera] 57 6e-06
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ... 57 6e-06
emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera] 56 8e-06
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 56 8e-06
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 63.2 bits (152), Expect = 7e-08
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Frame = +1
Query: 289 LDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSLYF----- 453
LD CE C++ K+KK+ + +GK +S VL YVH LW + + + + + YF
Sbjct: 479 LDFCENCVMGKAKKVSFNVGKHNSEDVLRYVH-ADLWGSTNVTPSL---SGNKYFLSIID 534
Query: 454 --SRKLWVYILKNKADAFIRFVEWYNEVENEK 543
+RK+W+Y L++K + F RF EW VEN++
Sbjct: 535 DKTRKVWLYFLRSKDETFDRFCEWKELVENQQ 566
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 62.4 bits (150), Expect = 1e-07
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Frame = +1
Query: 247 ITKKRNSEKSMPFKLDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*V 426
+ KK +K LD+CE+CI ++KK+ + + + + L+YVH LW + +
Sbjct: 463 LIKKGFLDKKKVSMLDTCEDCIYGRAKKIGFNLAQHDTKKKLEYVH-SDLWGAPTVPMSL 521
Query: 427 EEDTSSLYF----SRKLWVYILKNKADAFIRFVEWYNEVENE 540
+ F +RK+WVY LK K +AF +FV W + VEN+
Sbjct: 522 GNCQYFISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQ 563
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 62.4 bits (150), Expect = 1e-07
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Frame = +1
Query: 232 HQRL*ITKKRNSE---------KSMPFKLDSCEECILRKSKKLPYAMGKQSSSLVLDYVH 384
HQRL ++N E K LD CE+CI K+K+ +++ + L+Y+H
Sbjct: 442 HQRLCHMSQKNMEILVRKGFLDKKKVSSLDVCEDCIYGKAKRKSFSLAHHDTKEKLEYIH 501
Query: 385 YKGLWRLSRIAQ*VEEDTSSLY----FSRKLWVYILKNKADAFIRFVEWYNEVENE 540
LW + + + + F+RK+WVY +K K +AF +FVEW N VEN+
Sbjct: 502 -SDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQ 556
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 62.0 bits (149), Expect = 1e-07
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +1
Query: 286 KLDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSLYF---- 453
+L+ CE C++ KSKK+ + +GK +S L YVH LW + + + YF
Sbjct: 468 ELEFCEHCVMGKSKKVSFNVGKHTSEDALSYVH-ADLWGSPNVTPSI---SGKQYFLSII 523
Query: 454 ---SRKLWVYILKNKADAFIRFVEWYNEVENE 540
+RK+W+Y LK+K + F +F EW + VEN+
Sbjct: 524 DDKTRKVWLYFLKSKDETFDKFCEWKSLVENQ 555
>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Frame = +1
Query: 286 KLDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSLYF---- 453
+LD CE C++ K+KK+ + MGK +S VL YVH LW + + + + + YF
Sbjct: 378 ELDFCENCVMGKAKKVSFNMGKHNSEYVLSYVH-ADLWGSTNVTPSL---SGNKYFLSII 433
Query: 454 ---SRKLWVYILKNKADAFIRFVEWYNEVENEK 543
+RK+W+Y L++K + F RF E VEN++
Sbjct: 434 DDKTRKVWLYFLRSKDETFDRFCERKELVENQQ 466
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 61.2 bits (147), Expect = 3e-07
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +1
Query: 247 ITKKRNSEKSMPFKLDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*V 426
+ +K EK +L CE C++ KSKKL + +GK + VL Y+H LW +
Sbjct: 456 LAEKGLLEKKDIKELSFCENCVMGKSKKLSFNVGKHITDEVLGYIH-ADLWGKQYFLSII 514
Query: 427 EEDTSSLYFSRKLWVYILKNKADAFIRFVEWYNEVENE 540
++ SRK+W+ LK K + F RF EW VEN+
Sbjct: 515 DDK------SRKVWLMFLKTKDETFERFCEWKELVENQ 546
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 60.5 bits (145), Expect = 4e-07
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Frame = +1
Query: 286 KLDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSLY----- 450
KL CE C++ K +++ ++MG +++ VL+Y+H LW S VE + Y
Sbjct: 776 KLKFCETCVMGKQRRVKFSMGSHTTNGVLEYIH-SDLWGPSP----VESHSGCRYYVTFI 830
Query: 451 --FSRKLWVYILKNKADAFIRFVEWYNEVE 534
FSRK+WVY LK K + F +F EW VE
Sbjct: 831 DDFSRKVWVYFLKAKDEVFGKFKEWKTMVE 860
>gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thaliana]
gi|7267195|emb|CAB77906.1| putative polyprotein
[Arabidopsis thaliana]
Length = 778
Score = 59.7 bits (143), Expect = 7e-07
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +1
Query: 247 ITKKRNSEKSMPFKLDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*V 426
+ KK +K LD+CE+CI K+KK+ + + + L+YVHY LW + +
Sbjct: 346 LVKKGFLDKKKVSMLDTCEDCIYGKAKKIGFNFAQHDTKEKLEYVHY-DLWGAPTMPMAL 404
Query: 427 EEDTSSLYF----SRKLWVYILKNKADAFIRFVEWYNEVENE 540
+ F +RK+ VY LK K +AF +FV W + VEN+
Sbjct: 405 GNCQYFISFIDDHTRKVCVYFLKTKDEAFEKFVSWISLVENQ 446
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Frame = +1
Query: 247 ITKKRNSEKSMPFKLDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*V 426
+ KK +K KL++CE+CI K+K++ + + + + L+YVH LW + +
Sbjct: 434 LLKKGLLDKKKVSKLETCEDCIYGKAKRIGFNLAQHDTREKLEYVH-SDLWGAPSVPFSL 492
Query: 427 EEDTSSLYF----SRKLWVYILKNKADAFIRFVEWYNEVENE 540
+ + F +RK+ +Y LK K +AF +FVEW N VEN+
Sbjct: 493 GKCQYFISFIDDYTRKVRIYFLKTKDEAFDKFVEWANLVENQ 534
>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
Length = 1211
Score = 57.4 bits (137), Expect = 4e-06
Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Frame = +1
Query: 271 KSMPFKLDSCEECILRKSKKLPYAM-GKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSL 447
KS+ F D CE CIL K KK+ + G+ S + L+ VH LW S +A S
Sbjct: 379 KSIDF--DMCESCILGKQKKVSFLKTGRTSKAEKLELVH-TDLWGPSPVASL----GGSR 431
Query: 448 YF-------SRKLWVYILKNKADAFIRFVEWYNEVENE 540
Y+ SRK+WVY LKNK+D F+ F +W VE E
Sbjct: 432 YYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKVMVETE 469
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 57.4 bits (137), Expect = 4e-06
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +1
Query: 289 LDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSLYF----S 456
L+ E C++ K+KK+ + +GK +S +L YVH LW + + + L S
Sbjct: 152 LEFYEHCVMGKAKKVSFNIGKHNSEEILSYVH-ADLWGSQNVTPSMSGNKYFLSIIDDKS 210
Query: 457 RKLWVYILKNKADAFIRFVEWYNEVENE 540
RK+W+Y L++K + F +F EW VEN+
Sbjct: 211 RKVWLYFLRSKDETFDKFCEWKELVENQ 238
>emb|CAN66898.1| hypothetical protein VITISV_037436 [Vitis vinifera]
Length = 1183
Score = 56.6 bits (135), Expect = 6e-06
Identities = 42/108 (38%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Frame = +1
Query: 271 KSMPFKLDSCEECILRKSKKLPYAM-GKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSL 447
KS+ F D CE CIL K KK+ + G+ + L+ VH LW S +A S
Sbjct: 403 KSIDF--DMCESCILGKQKKVSFLKTGRTPKAEKLELVH-TDLWGPSPVASL----GGSR 455
Query: 448 YF-------SRKLWVYILKNKADAFIRFVEWYNEVENEKVLG*NALEL 570
Y+ SRK+WVY LKNK+D F+ F +W VE E L L L
Sbjct: 456 YYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRL 503
>emb|CAN65235.1| hypothetical protein VITISV_040876 [Vitis vinifera]
Length = 1379
Score = 56.6 bits (135), Expect = 6e-06
Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Frame = +1
Query: 271 KSMPFKLDSCEECILRKSKKLPYAM-GKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSL 447
KS+ F D CE CIL K KK+ + G+ S L+ VH LW S +A S
Sbjct: 46 KSIDF--DMCESCILGKQKKVSFLKTGRTPKSEKLELVH-TDLWGPSPVASL----GGSR 98
Query: 448 YF-------SRKLWVYILKNKADAFIRFVEWYNEVENE 540
Y+ SRK+WVY LKNK+D F+ F +W VE E
Sbjct: 99 YYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKVMVETE 136
>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
gi|7267743|emb|CAB78169.1| putative retrotransposon
[Arabidopsis thaliana]
Length = 1230
Score = 56.6 bits (135), Expect = 6e-06
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +1
Query: 247 ITKKRNSEKSMPFKLDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*V 426
+ KK + KL+ CE+CI K+++L + + ++ L+YVH LW + +
Sbjct: 440 LVKKGYLDGKKVSKLELCEDCIYGKARRLSFVVATHNTEDKLNYVH-SDLWGAPSVPLSL 498
Query: 427 EEDTSSLYF----SRKLWVYILKNKADAFIRFVEWYNEVENE 540
+ + F SRK WVY LK+K +AF F EW VEN+
Sbjct: 499 GKCQYFISFIDVYSRKTWVYFLKHKDEAFGTFAEWSVMVENQ 540
>emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]
Length = 1246
Score = 56.2 bits (134), Expect = 8e-06
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Frame = +1
Query: 271 KSMPFKLDSCEECILRKSKKLPYAM-GKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSL 447
KS+ F D CE CIL K KK+ + G+ + L+ VH LW S +A S
Sbjct: 412 KSIDF--DMCESCILGKQKKVSFLKTGRTPKAEKLELVH-TDLWGPSPVASL----GGSR 464
Query: 448 YF-------SRKLWVYILKNKADAFIRFVEWYNEVENE 540
Y+ SRK+WVY LKNK+D F+ F +W VE E
Sbjct: 465 YYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKXMVETE 502
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 56.2 bits (134), Expect = 8e-06
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Frame = +1
Query: 289 LDSCEECILRKSKKLPYAMGKQSSSLVLDYVHYKGLWRLSRIAQ*VEEDTSSLYF----- 453
L CE C+ K+ ++ +A + LDY+H LW SR V + YF
Sbjct: 423 LPFCEHCVFGKATRVKFAKAIHETQNQLDYIH-SDLWGPSR----VPSIGGARYFLTLID 477
Query: 454 --SRKLWVYILKNKADAFIRFVEWYNEVENE 540
SRK+W+Y LKNK++ F++F EW VE +
Sbjct: 478 DYSRKVWIYFLKNKSETFLKFKEWKILVETQ 508