BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00023098
         (2688 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]   734   0.0  
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]   672   0.0  
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]   563   e-157
emb|CBI36090.3| unnamed protein product [Vitis vinifera]              541   e-151
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]           499   e-138
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   495   e-137
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]         483   e-133
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...   455   e-125
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...   446   e-122
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ...   446   e-122
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...   443   e-121
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...   435   e-119
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...   419   e-114
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   404   e-110
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   399   e-108
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   398   e-108
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   396   e-107
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   395   e-107
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  389   e-105
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   382   e-103

>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
          Length = 1453

 Score =  734 bits (1894), Expect = 0.0
 Identities = 375/749 (50%), Positives = 489/749 (65%), Gaps = 2/749 (0%)
 Frame = -2

Query: 2330 TMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSASGETISNPEYV 2151
            TMIHM++IKLSS+NYLLW+ Q +P+L    LL  V+GS   PP+TI   S  +  NP+YV
Sbjct: 10   TMIHMITIKLSSTNYLLWRNQLLPLLQCQNLLSHVDGSVAPPPITIAVDSSSSQPNPQYV 69

Query: 2150 KWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTHQXXXXXXXX 1971
             W   DQRLL +LFS+L+EEAMTEV+  T++R  W ALE++F+H S +   +        
Sbjct: 70   AWQLQDQRLLSLLFSSLTEEAMTEVLGLTTARDVWLALENSFSHISKTCELRIKDDLQLI 129

Query: 1970 XXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADTRMAMTPIPS 1791
                 SV EY   FKALCDQL+A+G+ VD++DK HW+LRGLGA FANF+  +M++TP+P 
Sbjct: 130  KRGTRSVTEYSRSFKALCDQLTAMGRSVDDTDKVHWYLRGLGADFANFSTAQMSLTPLPV 189

Query: 1790 FTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFNGQSPHTPXXXXX 1611
            F  L+ +A  F++  K++    S+ P                   SF+   P  P     
Sbjct: 190  FKDLVPKAESFEIFQKSLG---SSFPFL--------------QVPSFSRWLPWRPWTWTF 232

Query: 1610 XXXXXXXXXXXXXXXXXXXXRKPRCQICKGE-HYADKCPLYLGRDYSNPANLAEAFTSSC 1434
                                  PRCQICK E H AD+C     R     A LAEAFT++C
Sbjct: 233  ----------------------PRCQICKTEGHTADRCRSRYDRAEPT-AQLAEAFTTTC 269

Query: 1433 NVS-GPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXXXXXXXXXXHD 1257
            ++S G  SDWF D+GASAHMT D S LD V+PY            +L            +
Sbjct: 270  SLSNGSESDWFTDTGASAHMTPDPSQLDKVEPYHGKDCVIVGNGASLPITHTGTLSSSSN 329

Query: 1256 VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTIAQGHLDRGLYVL 1077
            +QLLDVLVVP +TKNLLSISKLT+D+P+ V FS   F++QNR T   +A+G    GLYVL
Sbjct: 330  LQLLDVLVVPRLTKNLLSISKLTSDFPLSVTFSHDNFVVQNRITGMAVAKGKRAGGLYVL 389

Query: 1076 DRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVLPTPKLCSPCQ 897
            +RG  A  + + +    ASFELWH RLGHV   I+SLLNK G L +TS+LPTP LCS CQ
Sbjct: 390  ERGHSAFASVLRNKNLHASFELWHARLGHVNHSILSLLNKKGQLFLTSLLPTPSLCSTCQ 449

Query: 896  LAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFSRFTWIYPLRA 717
            LAKS RL F+ N  R++ +L LVHCD+WG AP+ +  G+ YYV F+DD+SRFTW+YPL+ 
Sbjct: 450  LAKSHRLPFSSNTTRSNVVLGLVHCDIWGLAPVKSNLGFNYYVLFIDDYSRFTWLYPLKL 509

Query: 716  KSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHHRISCPYTPQQ 537
            KS+FF++F++F   V NQ+S  +K FQSDGG+EF +   ++ ++  GIHH++SCPYTP Q
Sbjct: 510  KSDFFDIFLQFQKLVENQYSTKIKIFQSDGGAEFTSNRFQSHLQQFGIHHQMSCPYTPSQ 569

Query: 536  NGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPILDNKSPFELLFGR 357
            NGR ERKHRH+ ETGL++LFH+H P   W DAF+TA Y+INRLP P+L   SPFE+LFG+
Sbjct: 570  NGRAERKHRHVTETGLALLFHSHVPPRYWVDAFSTATYIINRLPLPVLGGLSPFEVLFGK 629

Query: 356  VPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRCYDPATSRTYITRN 177
             P Y NF PFGCRV+P LRD APHK +PRS PCIFLGYSS++KGFRC+D  TSRTYITR+
Sbjct: 630  SPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGFRCFDTTTSRTYITRH 689

Query: 176  AQFDEHCFPFATSGVTTPSPKLDFTSFYE 90
            A+FDEH FPF+ +   T    +  ++F+E
Sbjct: 690  ARFDEHFFPFSNTSSATSIADIGLSNFFE 718


>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
          Length = 1501

 Score =  672 bits (1734), Expect = 0.0
 Identities = 355/759 (46%), Positives = 468/759 (61%), Gaps = 2/759 (0%)
 Frame = -2

Query: 2360 SSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181
            S ++  LP  T+IHM++IKLSSSNYLLWK Q +P+L S  LL +V+G+  VPP      +
Sbjct: 3    SESSHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTL-VPPPRFEPET 61

Query: 2180 GETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRT 2001
              T+S  +Y+ W + DQRLL +L S+L+EEA+  VV  +++R  W ALE+ F+H S +R 
Sbjct: 62   STTLST-KYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKARE 120

Query: 2000 HQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFAD 1821
             +              V EY   FK LCDQL A+G+PV+++DK HWFLRG    F  F  
Sbjct: 121  LRLKDDLQLMKCGTKPVAEYARTFKTLCDQLHAIGRPVEDTDKVHWFLRGTRPRFFQFFY 180

Query: 1820 TRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFNGQ 1641
            +          TT    A      T     T   +P AF                  N  
Sbjct: 181  SSNXSLESSEPTTAAFTA------TNRSRTTSHGTPFAFRNNQRGRSHSH-------NNN 227

Query: 1640 SPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQICKGE-HYADKCPLYLGRDYSNPA 1464
            S +                           R PRCQIC+ E HYAD+C     R  S+ A
Sbjct: 228  SSNR-----------------GRTYSGHGRRPPRCQICRIEGHYADRCNQRYARTDSS-A 269

Query: 1463 NLAEAFTSSCNVSGP-SSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXX 1287
            +LAEAF +SC++SGP ++DWF+D+GASAHMT+D S LD  + Y            +L   
Sbjct: 270  HLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSXLDQSKNYMGKDSVIVGNGASLPIT 329

Query: 1286 XXXXXXXXHDVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTIAQ 1107
                     ++ LLDVLVV H+TKNLLSISKLT+D+P+ V F+++ F +QNR T + +A 
Sbjct: 330  HTGTLSPVPNIHLLDVLVVXHLTKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTGRXVAT 389

Query: 1106 GHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVL 927
            G  D GLYVL+RG  A ++ + +   +AS++LWH RLGH              LS+TS+L
Sbjct: 390  GKRDGGLYVLERGNSAFISVLKNKSLRASYDLWHARLGH--------------LSLTSLL 435

Query: 926  PTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFS 747
            P+P LCS CQLAK+ RL ++ NE R+  +LDL+HCDLWGP+PI +  G+ YYV F+DD+S
Sbjct: 436  PSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYVIFIDDYS 495

Query: 746  RFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHH 567
            RFTW+YPL+ KS+FF++F++F  FV NQ S  +K FQSDGG+EF NT  +  + T GIHH
Sbjct: 496  RFTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLRTSGIHH 555

Query: 566  RISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPILDN 387
            ++SCPYTP QNGR ERKHRH+ ETGL++LFH+H     W DAF+TA Y+INRLP+P+L  
Sbjct: 556  QLSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSPRFWVDAFSTATYIINRLPTPLLGG 615

Query: 386  KSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRCYDP 207
            KSPFELL+G  P+Y NF PFGCRV+P LRD  P+KL+PRS PCIFLGYS ++KGFRC DP
Sbjct: 616  KSPFELLYGXSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIPCIFLGYSPSHKGFRCLDP 675

Query: 206  ATSRTYITRNAQFDEHCFPFATSGVTTPSPKLDFTSFYE 90
             TSR YITR+AQFDE  FP   S    P   L  ++F E
Sbjct: 676  TTSRLYITRHAQFDETHFPTVPSSQAQPLSSLHISNFLE 714


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score =  563 bits (1450), Expect = e-157
 Identities = 287/642 (44%), Positives = 403/642 (62%), Gaps = 1/642 (0%)
 Frame = -2

Query: 2360 SSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181
            S ++  LP  T+IHM++IKLSSSNYLLWK Q +P+L S  LL +V+G+  VPP      +
Sbjct: 3    SESSHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTL-VPPPRFEPET 61

Query: 2180 GETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRT 2001
              T+S  +Y+ W + DQRLL +L S+L+EEA+  VV  +++R  W ALE+ F+H S +R 
Sbjct: 62   STTLST-KYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKARE 120

Query: 2000 HQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFAD 1821
             +              V EY   FK LCDQL A+G+PV+++DK HWF RGLG  F++F+ 
Sbjct: 121  LRLKDDLQLMKRGTKPVAEYARTFKTLCDQLHAIGRPVEDTDKVHWFFRGLGPDFSSFST 180

Query: 1820 TRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFNGQ 1641
             +M++TP+P F  L+ +A  F+L  ++++ ++ T+  AFT                 N Q
Sbjct: 181  AQMSLTPLPYFADLVSKAESFELFQRSLESSEPTTA-AFTATNRSRTTSHGTPFAFRNNQ 239

Query: 1640 SPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQICKGEHYADKCPLYLGRDYSNPAN 1461
               +                             R +     HYAD+C     R  S+ A+
Sbjct: 240  RGRS--------------------HSHNNNSSNRGRTYSEGHYADRCNQRYARTDSS-AH 278

Query: 1460 LAEAFTSSCNVSGP-SSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXXX 1284
            LAEAF +SC++SGP ++DWF+D+GASAHMT+D S LD  + Y            +L    
Sbjct: 279  LAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGVSLPITH 338

Query: 1283 XXXXXXXHDVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTIAQG 1104
                    ++ LLDVLVVPH+TKNLLSISKLT+D+P+ V F+++ F +QNR T + +A G
Sbjct: 339  TGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTGRVVATG 398

Query: 1103 HLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVLP 924
              D GLYVL+ G  A ++ + +   +AS++LWH RLGHV + +IS LNK GHLS+TS+LP
Sbjct: 399  KRDGGLYVLECGNSAFISVLKNKSLRASYDLWHARLGHVNYSVISFLNKKGHLSLTSLLP 458

Query: 923  TPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFSR 744
            +P LCS CQLAK+ RL ++ NE R+  +LDL+HCDLWGP+PI +  G+ YYV F+DD+SR
Sbjct: 459  SPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYVIFIDDYSR 518

Query: 743  FTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHHR 564
            FTW+YPL+ KS+FF++F++F  FV NQ S  +K FQSDGG+EF NT  +  + T GIHH+
Sbjct: 519  FTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLRTSGIHHQ 578

Query: 563  ISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAF 438
            +SCPYT  QNGR ERKHRH+ ETGL++LFH H     W + F
Sbjct: 579  LSCPYTXAQNGRAERKHRHVTETGLALLFHXHLSPRFWVERF 620


>emb|CBI36090.3| unnamed protein product [Vitis vinifera]
          Length = 1273

 Score =  541 bits (1394), Expect = e-151
 Identities = 269/549 (48%), Positives = 365/549 (66%), Gaps = 2/549 (0%)
 Frame = -2

Query: 1862 FLRGLGASFANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXX 1683
            FLRGLG  F+NF+  +M++TP+P F  L+ +A  F+L  ++++ ++ T+  AFT      
Sbjct: 729  FLRGLGPDFSNFSTAQMSLTPLPYFADLVSKAESFELFQRSLESSEPTTA-AFTATNRSR 787

Query: 1682 XXXXXXXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQICKGE-HYAD 1506
                       N Q   +                          R PRCQI + E HYAD
Sbjct: 788  TTSHGTPFAFRNNQRGRS-------HSHNNNSSNRGRTYSGHGRRPPRCQISRIEGHYAD 840

Query: 1505 KCPLYLGRDYSNPANLAEAFTSSCNVSGP-SSDWFVDSGASAHMTSDLSTLDNVQPYSXX 1329
            +C     R  S+ A+LAEAF +SC++SGP ++DWF+D+GASAHMT+D S LD  + Y   
Sbjct: 841  RCNQRYARTDSS-AHLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGK 899

Query: 1328 XXXXXXXXNALXXXXXXXXXXXHDVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHT 1149
                     +L            ++ LLDVLVVPH+ KNLLSISKLT+D+P+ V F+++ 
Sbjct: 900  DSVIVGNGASLPITHTGTLSSVPNIHLLDVLVVPHLIKNLLSISKLTSDFPLSVTFTNNL 959

Query: 1148 FLIQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIIS 969
            F +QNR T + +A G  D GLYVL+RG  A ++ + +   +AS++LWH RLGHV + +IS
Sbjct: 960  FTVQNRQTGRVVATGKRDGGLYVLERGNSAFISVLKNKSLRASYDLWHARLGHVNYFVIS 1019

Query: 968  LLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTA 789
             L+K GHLS+ S+LP+P LCS CQLAK+ RL ++ NE R+  +LDL+HCDL GP+PI + 
Sbjct: 1020 FLHKKGHLSLMSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLPGPSPIKSN 1079

Query: 788  EGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRN 609
             G+ YYV F+DD+SRFTW+YPL+ KS+FF++F++F  FV NQ    +K FQSDGG+EF N
Sbjct: 1080 SGFLYYVIFIDDYSRFTWLYPLKFKSDFFDIFLQFKKFVENQHFARIKVFQSDGGAEFTN 1139

Query: 608  THVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATA 429
            T  +  + T GIHH++SCPYTP QNGR ERKHRH+ ETGL++LFH+H     W DAF+TA
Sbjct: 1140 TCFKAHLRTSGIHHQLSCPYTPAQNGRAERKHRHVTETGLTLLFHSHLSPRFWVDAFSTA 1199

Query: 428  VYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFL 249
             Y+INRLP+P+L  KSPFELL+G  P+Y NF PFGCRV+P LRD  P+KL+PRS PCIFL
Sbjct: 1200 TYIINRLPTPLLGGKSPFELLYGYSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIPCIFL 1259

Query: 248  GYSSAYKGF 222
            GYS ++KGF
Sbjct: 1260 GYSPSHKGF 1268


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score =  499 bits (1286), Expect = e-138
 Identities = 284/749 (37%), Positives = 397/749 (53%), Gaps = 14/749 (1%)
 Frame = -2

Query: 2351 ADTLPIATMIHM---VSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181
            AD  P    +H+   V++KL+ SNYLLWK QF  +L+  +L+GFVNG    PP T+   +
Sbjct: 2    ADPYPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSCHKLIGFVNGGITPPPRTLNVVT 61

Query: 2180 GET---ISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSV 2010
            G+T   ++NP+Y  WF TDQ +   LF TLSEE +  V +  +SR  W +L   F  SSV
Sbjct: 62   GDTSVDVANPQYESWFCTDQLIRSWLFGTLSEEVLGYVHNLQTSRDIWISLAENFNKSSV 121

Query: 2009 SRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASF-- 1836
            +R                ++  Y   F A+CD LS++GKPVDES K   FL GLG  +  
Sbjct: 122  AREFTLRRTLQLLSKKDKTLSAYCREFIAVCDALSSIGKPVDESMKIFGFLNGLGREYDP 181

Query: 1835 -ANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXX 1662
                  + ++    P+F  ++ +   FD+  ++ + + + +P MAF              
Sbjct: 182  ITTVIQSSLSKISPPTFRDVISEVKGFDVKLQSYEESVTANPHMAFNTQRSEYTDNYTSG 241

Query: 1661 XXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485
                 G+  +                            +P CQIC +  H A KC     
Sbjct: 242  NRG-KGRGGYGQNRGRSGYSTRGRGFSQHQTNSNNTGERPVCQICGRTGHTALKCYNRFD 300

Query: 1484 RDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXX 1305
             +Y +  + A+AF+S         +W  DS A+AH+TS  + L    PY+          
Sbjct: 301  HNYQS-VDTAQAFSSLRVSDSSGKEWVPDSAATAHVTSSTNNLQAASPYNGSDTVLVGDG 359

Query: 1304 NALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQN 1134
              L            D   + L +VLV P I K+LLS+SKL +DYP  V F  +   I +
Sbjct: 360  AYLPITHVGSTTISSDSGTLPLNEVLVCPDIQKSLLSVSKLCDDYPCGVYFDANKVCIID 419

Query: 1133 RATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKL 954
              T++ +++G    GLYVL+      +A  S+ +  AS E+WH RLGH    I+  L   
Sbjct: 420  INTQKVVSKGPRSNGLYVLEN--QEFVAFYSNRQCAASEEIWHHRLGHSNSRILQQLKSS 477

Query: 953  GHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRY 774
              +S      +P +C PCQ+ KS +L F  +  R   +L  +HCDLWGP+P+ + +G++Y
Sbjct: 478  KEISFNKSRMSP-VCEPCQMGKSSKLQFFSSNSRELDLLGRIHCDLWGPSPVVSKQGFKY 536

Query: 773  YVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRT 594
            YV FVDD+SR++W YPL+AKS+FF VF+ F   V NQF+  +K FQSDGG EF +  ++ 
Sbjct: 537  YVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKK 596

Query: 593  FMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVIN 414
             +   GI HRISCPYTPQQNG  ERKHRH +E GLSM+FH+H P   W +AF TA ++ N
Sbjct: 597  HLTDCGIQHRISCPYTPQQNGIAERKHRHFVELGLSMMFHSHTPLQFWVEAFFTASFLSN 656

Query: 413  RLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSA 234
             LPSP L N SP E L  + P Y   + FG   +P LR    HK  PRS  C+FLGY+S 
Sbjct: 657  MLPSPSLGNVSPLEALLKQKPNYAMLRVFGTACYPCLRPLGEHKFEPRSLQCVFLGYNSQ 716

Query: 233  YKGFRCYDPATSRTYITRNAQFDEHCFPF 147
            YKG+RC  P T R YI+R+  FDE  FPF
Sbjct: 717  YKGYRCLYPPTGRVYISRHVIFDEETFPF 745


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score =  495 bits (1274), Expect = e-137
 Identities = 285/749 (38%), Positives = 395/749 (52%), Gaps = 14/749 (1%)
 Frame = -2

Query: 2351 ADTLPIATMIHM---VSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181
            A + P    +H+   V++KL+ SNYLLWK QF  +L+S +L+GFVNG+   P  +    +
Sbjct: 2    ATSYPFPDNVHVTSSVTLKLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVN 61

Query: 2180 GETIS---NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSV 2010
            GE  S   NP Y  WF TDQ +   LF TLSEE +  V + ++SR  W +L   F  SSV
Sbjct: 62   GEVTSEEPNPLYESWFCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSV 121

Query: 2009 SRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASF-- 1836
            +R                    Y   FK +CD LS++GKPVDES K   FL GLG  +  
Sbjct: 122  AREFSLRQNLQLLSKKEKPFSVYCREFKTICDALSSIGKPVDESMKIFGFLNGLGRDYDP 181

Query: 1835 -ANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXX 1662
                  + ++  P P+F  ++ +   FD   ++ +   S +P +AF              
Sbjct: 182  ITTVIQSSLSKLPTPTFNDVVSEVQGFDSKLQSYEEAASVTPHLAFNIERSESGSPQYNP 241

Query: 1661 XXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485
                 G+S                              +P CQIC +  H A KC  Y  
Sbjct: 242  NQKGRGRSGQNKGRGGYSTRGRGFSQHQSSPQVSGP--RPVCQICGRTGHTALKC--YNR 297

Query: 1484 RDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXX 1305
             D +  A + +AF++         +W  DS A+AH+TS  + L +   Y           
Sbjct: 298  FDNNYQAEI-QAFSTLRVSDDTGKEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDG 356

Query: 1304 NALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQN 1134
              L                + L +VLVVP+I K+LLS+SKL +DYP  V F  +   I +
Sbjct: 357  TYLPITHTGSTTIKSSNGKIPLNEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIID 416

Query: 1133 RATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKL 954
              T++ +  G    GLYVL+      +A  S+ +  A+ E+WH RLGH     +  L   
Sbjct: 417  LQTQKVVTTGPRRNGLYVLEN--QEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNS 474

Query: 953  GHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRY 774
              + +     +P +C PCQ+ KS RL F +++ R    LD +HCDLWGP+P+ + +G +Y
Sbjct: 475  KAIQINKSRTSP-VCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKY 533

Query: 773  YVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRT 594
            Y  FVDD+SR++W YPL  KSEF +VFI F   V NQ +  +K FQSDGG EF +  ++T
Sbjct: 534  YAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKT 593

Query: 593  FMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVIN 414
             +   GIHHRISCPYTPQQNG  ERKHRH++E GLSMLFH+H P   W ++F TA Y+IN
Sbjct: 594  HLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIIN 653

Query: 413  RLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSA 234
            RLPS +L N SP+E LFG  P Y + + FG   +P LR  A +K  PRS  C+FLGY+S 
Sbjct: 654  RLPSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQ 713

Query: 233  YKGFRCYDPATSRTYITRNAQFDEHCFPF 147
            YKG+RC+ P T + YI+RN  F+E   PF
Sbjct: 714  YKGYRCFYPPTGKVYISRNVIFNESELPF 742


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  483 bits (1243), Expect = e-133
 Identities = 282/749 (37%), Positives = 391/749 (52%), Gaps = 14/749 (1%)
 Frame = -2

Query: 2351 ADTLPIATMIHM---VSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181
            A   P    +H+   V++KL+ SNYLLWK QF  +L+S +L+GFVNG    P  T    +
Sbjct: 2    APAYPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVN 61

Query: 2180 GETIS---NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSV 2010
             +  S   NP+Y  WF TDQ +   LF TLSEE +  V + T+SR  W +L   F  SS+
Sbjct: 62   DDVTSEVPNPQYEDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSI 121

Query: 2009 SRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASF-- 1836
            +R                S+  Y   FK +CD LS++GKPV+ES K   FL GLG  +  
Sbjct: 122  AREFSLRRNLQLLTKKDKSLSVYCRDFKIICDSLSSIGKPVEESMKIFGFLNGLGREYDP 181

Query: 1835 -ANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXX 1662
                  + ++  P P+F  ++ +   FD   ++ D T S +P +AF              
Sbjct: 182  ITTVIQSSLSKLPAPTFNDVISEVQGFDSKLQSYDDTVSVNPHLAFNTERSNSGAPQYNS 241

Query: 1661 XXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485
                 G+S                             ++P CQIC +  H A KC     
Sbjct: 242  NSRGRGRSGQN--RGRGGYSTRGRGFSQHQSASPSSGQRPVCQICGRIGHTAIKCYNRFD 299

Query: 1484 RDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXX 1305
             +Y +     +AF++         +W+ DS A+AH+T+  S L N   Y           
Sbjct: 300  NNYQSEVP-TQAFSALRVSDETGKEWYPDSAATAHITASTSGLQNATTYEGNDAVLVGDG 358

Query: 1304 NALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQN 1134
              L                + L +VLV P I K+LLS+SKL +DYP  V F  +   I +
Sbjct: 359  TYLPITHVGSTTISSSKGTIPLNEVLVCPAIQKSLLSVSKLCDDYPCGVYFDANKVCIID 418

Query: 1133 RATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKL 954
              T++ +++G  + GLY+L+      +A  S+ +  AS E WH RLGH    I+  L   
Sbjct: 419  LTTQKVVSKGPRNNGLYMLENSE--FVALYSNRQCAASMETWHHRLGHSNSKILQQLLTR 476

Query: 953  GHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRY 774
              + V     +P +C PCQ+ KS RL F  ++ RA   LD VHCDLWGP+P+ + +G++Y
Sbjct: 477  KEIQVNKSRTSP-VCEPCQMGKSTRLQFFSSDFRALKPLDRVHCDLWGPSPVVSNQGFKY 535

Query: 773  YVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRT 594
            Y  FVDDFSRF+W +PLR KS+F +VFI +   V NQ    +K+FQSDGG EF +  ++ 
Sbjct: 536  YAVFVDDFSRFSWFFPLRMKSKFISVFIAYQKLVENQLGTKIKEFQSDGGGEFTSNKLKE 595

Query: 593  FMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVIN 414
                 GIHHRISCPYTPQQNG  ERKHRH++E GLSML+H+H P   W +AF TA Y+ N
Sbjct: 596  HFREHGIHHRISCPYTPQQNGVAERKHRHLVELGLSMLYHSHTPLKFWVEAFFTANYLSN 655

Query: 413  RLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSA 234
             LPS +L   SP+E LF +   Y   + FG   +P LR  A +K  PRS  C+FLGY + 
Sbjct: 656  LLPSSVLKEISPYETLFQQKVDYTPLRVFGTACYPCLRPLAKNKFDPRSLQCVFLGYHNQ 715

Query: 233  YKGFRCYDPATSRTYITRNAQFDEHCFPF 147
            YKG+RC  P T + YI+R+  FDE  FPF
Sbjct: 716  YKGYRCLYPPTGKVYISRHVIFDEAQFPF 744


>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
            putative protein [Arabidopsis thaliana]
          Length = 1415

 Score =  455 bits (1171), Expect = e-125
 Identities = 271/755 (35%), Positives = 394/755 (52%), Gaps = 12/755 (1%)
 Frame = -2

Query: 2372 MAGTSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTI 2193
            MA  S ++  L  +   H V++KLS++NYLLWK QF   L + +LLGFV G+ P P  T 
Sbjct: 1    MADNSDSSSALCFS---HYVTLKLSTANYLLWKIQFETWLNNQRLLGFVTGANPCPNATR 57

Query: 2192 TSASGETIS---NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFA 2022
            +  +G+ ++   NP+++ W   DQ+++G L  +LSE+A+  V    +SR  W +L   + 
Sbjct: 58   SIRNGDQVTEATNPDFLTWVQNDQKIMGWLLGSLSEDALRSVYGLHTSREVWFSLAKKYN 117

Query: 2021 HSSVSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGA 1842
              S SR                S+ EY +  K +CDQL ++G PV E++K    L GLG 
Sbjct: 118  RVSASRKSDLQRRLNPVSKNEKSMLEYLNCVKQICDQLDSIGCPVPENEKIFGVLNGLGQ 177

Query: 1841 SFANFADT-RMAMTPIP-SFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXX 1668
             +   +   + +M   P SF  ++ + I FD   +                         
Sbjct: 178  EYMLVSTMIKGSMDTYPMSFEDVVFKLINFDDKLQ------------------------- 212

Query: 1667 XXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLY 1491
                  NGQS                              +P CQIC K  H A KC   
Sbjct: 213  ------NGQSGGNRGRNNYTTKGRGFPQQISSGSPSDSGTRPTCQICNKYGHSAYKCWKR 266

Query: 1490 LGRDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXX 1311
                + +  + ++AF +       S+ W  DSGA++H+T+  S L + QPYS        
Sbjct: 267  FDHAFQSE-DFSKAFAAMRVSDQKSNPWVTDSGATSHITNSTSQLQSAQPYSGEDSVIVG 325

Query: 1310 XXNALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLI 1140
              + L            +   + L DVLV P+ITK+LLS+SKLT+DYP  + F     ++
Sbjct: 326  NSDFLPITHIGSAVLTSNQGNLPLRDVLVCPNITKSLLSVSKLTSDYPCVIEFDSDGVIV 385

Query: 1139 QNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLL- 963
            +++ TKQ + +G     LY+L+   P  +A  SS +   S E+WH+RLGH    ++  L 
Sbjct: 386  KDKLTKQLLTKGTRHNDLYLLEN--PKFMACYSSRQQATSDEVWHMRLGHPNQDVLQQLL 443

Query: 962  -NKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAE 786
             NK   +S TS      LC  CQ+ K  +L F  ++  +  +L+ VHCDLWGPAP+ +++
Sbjct: 444  RNKAIVISKTS----HSLCDACQMGKICKLPFASSDFVSSRLLERVHCDLWGPAPVVSSQ 499

Query: 785  GYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNT 606
            G+RYYV F+D++SRFTW YPLR KS+FF+VF+ F   V NQ    +  FQ DGG EF + 
Sbjct: 500  GFRYYVIFIDNYSRFTWFYPLRLKSDFFSVFLTFQKMVENQCQQKIASFQCDGGGEFISN 559

Query: 605  HVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAV 426
               + +   GI   ISCPYTPQQNG  ERKHRHI E G SM+F    P  LW +AF T+ 
Sbjct: 560  QFVSHLAECGIRQLISCPYTPQQNGIAERKHRHITELGSSMMFQGKVPQFLWVEAFYTSN 619

Query: 425  YVINRLPSPIL-DNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFL 249
            ++ N LPS +L D KSP+E+L G+ P Y + + FGC  +P LR  A +K  P+S  C+F 
Sbjct: 620  FLCNLLPSSVLKDQKSPYEVLMGKAPVYTSLRVFGCACYPNLRPYASNKFDPKSLLCVFT 679

Query: 248  GYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPFA 144
            GY+  YKG++C+ P T + YI R+  FDE  F F+
Sbjct: 680  GYNEKYKGYKCFHPPTGKIYINRHVLFDESKFLFS 714


>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score =  446 bits (1147), Expect = e-122
 Identities = 267/744 (35%), Positives = 386/744 (51%), Gaps = 19/744 (2%)
 Frame = -2

Query: 2318 MVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSASGETIS---NPEYVK 2148
            +V++KL+ +NYLLWK QF   L+S  LLGFV G+ P P  TI     +  S   N E++K
Sbjct: 15   VVTLKLTPTNYLLWKTQFESYLSSHLLLGFVTGATPRPASTIIVTKDDIQSEEANQEFLK 74

Query: 2147 WFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTHQXXXXXXXXX 1968
            W   DQ +   +F +LSEEA+  V+   S++  W  L   F   S +R +          
Sbjct: 75   WTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTRKYDLQKRLGTCS 134

Query: 1967 XXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFA---DTRMAMTPI 1797
                ++  Y S  K +CDQL ++G PV E +K    L GLG  + + A   +  + + P 
Sbjct: 135  KAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKIFGVLNGLGKEYESIATVIEHSLDVYPG 194

Query: 1796 PSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAF----TXXXXXXXXXXXXXXXSFNGQSPH 1632
            P F  ++++   FD            +P +AF    +               +F G+  +
Sbjct: 195  PCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFYTDKSYSSRGNNNSRGGRYGNFRGRGSY 254

Query: 1631 TPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRDYSNPANLA 1455
            +                           KP CQIC K  H A KC      +Y  P +L 
Sbjct: 255  SSRGRGFHQQFGSGSNNGSGNGS-----KPTCQICRKYGHSAFKCYTRFEENYL-PEDLP 308

Query: 1454 EAFTS---SCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXXX 1284
             AF +   S      S +W  DS A+AH+T+    L N Q YS          + L    
Sbjct: 309  NAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITH 368

Query: 1283 XXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTI 1113
                        + L DVLV P ITK+LLS+SKLT+DYP    F   + +I+++ T+Q +
Sbjct: 369  IGTIPLNISQGTLPLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQQLL 428

Query: 1112 AQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTS 933
             QG+  +GLYVL +  P      S+ +  +  E+WH RLGH    ++  L K   + V  
Sbjct: 429  TQGNKHKGLYVL-KDVP-FQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNK 486

Query: 932  VLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDD 753
               +  +C  CQ+ K  RL F  +E  +   L+ +HCDLWGPAP+T+A+G++YYV F+D+
Sbjct: 487  T--SSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDN 544

Query: 752  FSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGI 573
            +SRFTW YPL+ KS+FF+VF+ F   V NQ+   +  FQ DGG EF +      + + GI
Sbjct: 545  YSRFTWFYPLKLKSDFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFVAHLASCGI 604

Query: 572  HHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPIL 393
               ISCP+TPQQNG  ER+HR++ E GLS++FH+  P  LW +AF T+ ++ N LPS  L
Sbjct: 605  KQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLSNLLPSSTL 664

Query: 392  -DNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRC 216
             DNKSP+E+L G  P Y   + FG   +PYLR  A +K  P+S  C+FLGY++ YKG+RC
Sbjct: 665  SDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYAKNKFDPKSLLCVFLGYNNKYKGYRC 724

Query: 215  YDPATSRTYITRNAQFDEHCFPFA 144
              P T + YI R+  FDE  FP++
Sbjct: 725  LHPPTGKVYICRHVLFDERKFPYS 748


>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score =  446 bits (1147), Expect = e-122
 Identities = 268/749 (35%), Positives = 375/749 (50%), Gaps = 15/749 (2%)
 Frame = -2

Query: 2345 TLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS--GET 2172
            T P   + + V++KL+  NY+LWKRQF   L   +LLGFV GS P P  TI + +  G T
Sbjct: 10   TPPALKLTNAVTVKLTEKNYILWKRQFEAFLNGQRLLGFVTGSTPQPAATIPAPTINGTT 69

Query: 2171 IS--NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTH 1998
                NP+Y  WF TDQ +   L  + SE+  + V+ CT+S   W  L S F   + +R  
Sbjct: 70   TPAPNPDYALWFQTDQAIQSWLLGSFSEDVQSSVIHCTNSYEIWMTLASHFNRPTSARLF 129

Query: 1997 QXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADT 1818
            +             S+ +Y    K +CDQL+++G+PVDE  K    L GLG  +     +
Sbjct: 130  ELQRKLQTTAKQDKSMDDYLRDIKTICDQLTSIGQPVDERMKIFAALLGLGKEYEPIKTS 189

Query: 1817 ---RMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXXXXSF 1650
                M     PSF  ++ + + F+   K+     + SP +AF                  
Sbjct: 190  IEGSMDTQYHPSFEDVVPRLVAFEDRLKSYTTDTAVSPHLAFNTVRGRPFFTRNRGRN-- 247

Query: 1649 NGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRDYS 1473
             G                                +P CQIC K  H A +C       Y 
Sbjct: 248  RGGRSFFSTRGRGFPQHLSSSSSSRSSVSADSEARPVCQICGKSGHEAMRCWHRFDNSYQ 307

Query: 1472 --NPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNA 1299
                 N   A   S  +     +WF D+GASAH+T+    L N QPY             
Sbjct: 308  LDEMHNALAAMRVSDMIDSRGGEWFPDTGASAHITNTPHHLQNAQPYMGSDSVMVGNGEY 367

Query: 1298 LXXXXXXXXXXXH---DVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRA 1128
            L               ++ L DVLV P I K LLS+SK T DYP    F      I ++A
Sbjct: 368  LPITHTGAASIASSSGNLILNDVLVCPQIAKPLLSVSKFTTDYPCGFDFDADNVCIYDKA 427

Query: 1127 TKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGH 948
            TK+ + QG   +GLY +    PA  A  S+ +  AS E+WH RLGH   HI+  L  +  
Sbjct: 428  TKKVLLQGRNTKGLYSIKE--PAFHAFFSTRQVAASDEVWHQRLGHPNPHILQRLASIKS 485

Query: 947  LSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYV 768
            + +     +  LC  CQ+AKS RL F+ ++  A   L+ +HCD+WGP+P+ + + ++YYV
Sbjct: 486  VFINK--RSKSLCVSCQMAKSSRLPFSASQFVATRPLERIHCDVWGPSPVVSVQEFKYYV 543

Query: 767  AFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFM 588
              +D++SR+ W+YP++ KS+F ++FI F + V NQF  ++  FQ DGG EF +      +
Sbjct: 544  VLIDNYSRYCWMYPMKKKSDFHSIFIAFQSLVQNQFHTTIGTFQCDGGGEFISNQFLLHL 603

Query: 587  ETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRL 408
            +  GI   +SCP+TPQQNG  ER+HRHI+E GLS+LF + AP   W +AF TA ++ N L
Sbjct: 604  QKNGIQQLLSCPHTPQQNGLAERRHRHIVELGLSLLFQSRAPQKYWVEAFMTANFLSNLL 663

Query: 407  P-SPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAY 231
            P S   +  SP+E L  + P Y   + FGC  FP LR    +KL PRS  C+FLGYS  Y
Sbjct: 664  PHSANTNTASPYEKLHNKSPSYDALRIFGCACFPMLRPYTQNKLDPRSLQCVFLGYSEKY 723

Query: 230  KGFRCYDPATSRTYITRNAQFDEHCFPFA 144
            KG+RC  PAT R YI+R+  FDE  FPFA
Sbjct: 724  KGYRCLLPATGRVYISRHVIFDESKFPFA 752


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score =  443 bits (1139), Expect = e-121
 Identities = 269/765 (35%), Positives = 392/765 (51%), Gaps = 19/765 (2%)
 Frame = -2

Query: 2345 TLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSASG---- 2178
            TLP   + + V++KL+  NY+LWK QF   L+   LLGFVNG+   P  T++        
Sbjct: 9    TLPSLNISNCVTVKLTDRNYILWKSQFESFLSGQGLLGFVNGAYAAPTGTVSGPQDAGVT 68

Query: 2177 ETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTH 1998
            E I NP+Y  WF +DQ ++       SE+ ++ VV   +S   W  L   F   S SR  
Sbjct: 69   EAIPNPDYQAWFRSDQVVM-------SEDILSVVVGSKTSHEVWMNLAKHFNRISSSRIF 121

Query: 1997 QXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADT 1818
            +             +++EY    K +CDQL++VG PV E  K    + GL   +     +
Sbjct: 122  ELQRRLHSLSKEGKTMEEYLRYLKTICDQLASVGSPVAEKMKIFAMVHGLTREYEPLITS 181

Query: 1817 ---RMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFN 1647
                +   P PS+  ++++   FD   +    TD +  +AF                   
Sbjct: 182  LEGTLDAFPGPSYEDVVYRLKNFDDRLQGYTVTDVSPHLAFNTFRSSNRG---------R 232

Query: 1646 GQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRDYSN 1470
            G   +                            KP CQIC K  HYA +C       Y +
Sbjct: 233  GGRNNRGKGNFSTRGRGFQQQFSSSSSSVSASEKPMCQICGKRGHYALQCWHRFDDSYQH 292

Query: 1469 PANLAEAFTSSCNVSGPSSD--WFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNAL 1296
                A AF S+ +++  S D  W  DS A+AH+T++ S L  +QPY           N L
Sbjct: 293  SEAAAAAF-SALHITDVSDDSGWVPDSAATAHITNNSSRLQQMQPYLGNDTVMASDGNFL 351

Query: 1295 XXXXXXXXXXXH---DVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRAT 1125
                           ++ L DVLV P+I K+LLS+SKLT DYP    F     L++++AT
Sbjct: 352  PITHIGSANLPSTSGNLPLKDVLVCPNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKAT 411

Query: 1124 KQTIAQGH-LDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGH 948
             + + +G     GLY L+   P      S+ + KA+ E+WH+RLGH    ++ LL     
Sbjct: 412  CKVLTKGSSTSEGLYKLEN--PKFQMFYSTRQVKATDEVWHMRLGHPNPQVLQLLANKKA 469

Query: 947  LSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYV 768
            + +     T K+C  C+L KS RL F  ++  A   L+ VHCDLWGPAP+++ +G++YYV
Sbjct: 470  IQINK--STSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQYYV 527

Query: 767  AFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFM 588
             F+D+ SRF W YPL+ KS+F ++F+KF +FV N     +  FQSDGG EF +      +
Sbjct: 528  IFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVENLLQTKIGTFQSDGGGEFTSNRFLQHL 587

Query: 587  ETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRL 408
            +  GI H ISCP+TPQQNG  ERKHR + E GL+++F + AP   W +AF TA ++ N L
Sbjct: 588  QESGIQHYISCPHTPQQNGLAERKHRQLTERGLTLMFQSKAPQRFWVEAFFTANFLSNLL 647

Query: 407  PSPILDNK-SPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAY 231
            P+  LD+  +P+++LFG+ P Y   + FGC  FP LR  A +K  PRS  CIFLGY+  Y
Sbjct: 648  PTSALDSSTTPYQVLFGKAPDYSALRTFGCACFPTLRAYARNKFDPRSLKCIFLGYTEKY 707

Query: 230  KGFRCYDPATSRTYITRNAQFDEHCFPFATSGVT----TPSPKLD 108
            KG+RC+ P T+R Y++R+  FDE  FPF  +  +    +P+P  D
Sbjct: 708  KGYRCFFPPTNRVYLSRHVLFDESSFPFIDTYTSLQHPSPTPMFD 752


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  435 bits (1118), Expect = e-119
 Identities = 272/755 (36%), Positives = 371/755 (49%), Gaps = 21/755 (2%)
 Frame = -2

Query: 2345 TLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLT--ITSASGET 2172
            ++P   + + V++ L++ NY+LWK QF   L    LLGFV GS P P  T  ++   G T
Sbjct: 5    SVPSLNISNCVTVTLTAKNYILWKSQFESFLDGQGLLGFVTGSIPAPSQTSVVSDIDGST 64

Query: 2171 IS--NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTH 1998
             +  NPEY  WF TD+ +   L  +  E+ ++ VV+C +S   W ++ + F   S SR  
Sbjct: 65   SASPNPEYYTWFKTDRVVKSWLLGSFLEDILSVVVNCNTSHEVWISVANHFNRVSSSRLF 124

Query: 1997 QXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADT 1818
            +             S+ EY    K +CDQL++VG PV E  K    L GLG  +     T
Sbjct: 125  ELQRRLQNVSKRDKSMDEYLKDLKTICDQLASVGSPVTEKMKIFAALNGLGREYEPIKTT 184

Query: 1817 ---RMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXXXXSF 1650
                M   P PS   ++ +   +D   +      + SP +AF                  
Sbjct: 185  IENSMDALPGPSLEDVIPKLTGYDDRLQGYLEETAVSPHVAFNITTSDDSNASGYFNAYN 244

Query: 1649 NGQSP----HTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485
             G+                                      CQIC K  H A KC     
Sbjct: 245  RGKGKSNRGRNSFSTRGRGFHQQISSTNSSSGSQSGGTSVVCQICGKMGHPALKCWHRFN 304

Query: 1484 RDYSNP----ANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXX 1317
              Y       A  A   T   +  G  ++W  DS A+AH+T+   +L   QPY       
Sbjct: 305  NSYQYEELPRALAAMRITDITDQHG--NEWLPDSAATAHVTNSPRSLQQSQPYHGSDAVM 362

Query: 1316 XXXXNALXXXXXXXXXXXH---DVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTF 1146
                N L               +V L DVLV P ITK+LLS+SKLT DYP  V F     
Sbjct: 363  VADGNFLPITHTGSTNLASSSGNVPLTDVLVCPSITKSLLSVSKLTQDYPCTVEFDSDGV 422

Query: 1145 LIQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISL 966
             I ++ATK+ +  G    GLY L +      A  S+ +  AS E+WH RLGH    ++  
Sbjct: 423  RINDKATKKLLIMGSTCDGLYCL-KDDSQFKAFFSTRQQSASDEVWHRRLGHPHPQVLQQ 481

Query: 965  LNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAE 786
            L K   +S+     +  LC  CQL KS RL F  +   ++  L+ VHCDLWGP+PIT+ +
Sbjct: 482  LVKTNSISINKT--SKSLCEACQLGKSTRLPFVSSSFTSNRPLERVHCDLWGPSPITSVQ 539

Query: 785  GYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNT 606
            G+RYY  F+D +SRF+WIYPL+ KS+F+N+F+ FH  V NQ +  +  FQ DGG EF N 
Sbjct: 540  GFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKLVENQLNHKISVFQCDGGGEFVNH 599

Query: 605  HVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAV 426
                 ++  GI   IS P+TPQQNG  ERKHRH++E GLSMLF +  P   W +AF TA 
Sbjct: 600  KFLQHLQNHGIQQHISYPHTPQQNGLAERKHRHLVELGLSMLFQSKVPLKFWVEAFFTAN 659

Query: 425  YVINRLP-SPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFL 249
            ++IN LP S + D  SP+E L    P Y   + FGC  FP +RD A +K  PRS  C+FL
Sbjct: 660  FLINLLPTSAVEDAISPYEKLHQTTPDYTALRSFGCACFPTMRDYAMNKFDPRSLKCVFL 719

Query: 248  GYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPFA 144
            GY+  YKG+RC  P T R YI+R+  FDE  +PF+
Sbjct: 720  GYNDKYKGYRCLYPPTGRVYISRHVIFDETAYPFS 754


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7267767|emb|CAB81170.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1515

 Score =  419 bits (1077), Expect = e-114
 Identities = 261/752 (34%), Positives = 378/752 (50%), Gaps = 29/752 (3%)
 Frame = -2

Query: 2312 SIKLSSSNYLLWK----RQFIPML------TSFQLLGFVNGSEPVPPLTITSASGETIS- 2166
            +  L S  YLL K     +  P++      TS    GFV G+ P P  TI     +  S 
Sbjct: 4    TFNLVSEEYLLAKIVRPSRVAPLISSQSEETSLYSNGFVTGATPRPASTIIVTKDDIQSE 63

Query: 2165 --NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTHQX 1992
              N E++KW   DQ +   +F +LSEEA+  V+   S++  W  L   F   S +R +  
Sbjct: 64   EANQEFLKWTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTRKYDL 123

Query: 1991 XXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFA---D 1821
                        ++  Y S  K +CDQL ++G PV E +K    L GLG  + + A   +
Sbjct: 124  QKRLGTCSKAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKIFGVLNGLGKEYESIATVIE 183

Query: 1820 TRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAF----TXXXXXXXXXXXXXXX 1656
              + + P P F  ++++   FD            +P +AF    +               
Sbjct: 184  HSLDVYPGPCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFYTDKSYSSRGNNNSRGGRYG 243

Query: 1655 SFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRD 1479
            +F G+  ++                           KP CQIC K  H A KC      +
Sbjct: 244  NFRGRGSYSSRGRGFHQQFGSGSNNGSGNGS-----KPTCQICRKYGHSAFKCYTRFEEN 298

Query: 1478 YSNPANLAEAFTS---SCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXX 1308
            Y  P +L  AF +   S      S +W  DS A+AH+T+    L N Q YS         
Sbjct: 299  YL-PEDLPNAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGN 357

Query: 1307 XNALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQ 1137
             + L                + L DVLV P ITK+LLS+SKLT+DYP    F   + +I+
Sbjct: 358  GDFLPITHIGTIPLNISQGTLPLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIK 417

Query: 1136 NRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNK 957
            ++ T+Q + QG+  +GLYVL +  P      S+ +  +  E+WH RLGH    ++  L K
Sbjct: 418  DKRTQQLLTQGNKHKGLYVL-KDVP-FQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIK 475

Query: 956  LGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYR 777
               + V     +  +C  CQ+ K  RL F  +E  +   L+ +HCDLWGPAP+T+A+G++
Sbjct: 476  TKAIVVNKT--SSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQ 533

Query: 776  YYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVR 597
            YYV F+D++SRFTW YPL+ KS+FF+VF+ F   V NQ+   +  FQ DGG EF +    
Sbjct: 534  YYVIFIDNYSRFTWFYPLKLKSDFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFV 593

Query: 596  TFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVI 417
              + + GI   ISCP+TPQQNG  ER+HR++ E GLS++FH+  P  LW +AF T+ ++ 
Sbjct: 594  AHLASCGIKQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLS 653

Query: 416  NRLPSPIL-DNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYS 240
            N LPS  L DNKSP+E+L G  P Y   + FG   +PYLR  A +K  P+S  C+FLGY+
Sbjct: 654  NLLPSSTLSDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYAKNKFDPKSLLCVFLGYN 713

Query: 239  SAYKGFRCYDPATSRTYITRNAQFDEHCFPFA 144
            + YKG+RC  P T + YI R+  FDE  FP++
Sbjct: 714  NKYKGYRCLHPPTGKVYICRHVLFDERKFPYS 745


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  404 bits (1039), Expect = e-110
 Identities = 262/772 (33%), Positives = 376/772 (48%), Gaps = 22/772 (2%)
 Frame = -2

Query: 2372 MAGTSSTA---DTLPIATMIHMVSIKLSSS-NYLLWKRQFIPMLTSFQLLGFVNGSEPVP 2205
            MA T+ T+     LP +T I  +S+KL  S NYL WK QF+ +L    L+GF++G+E  P
Sbjct: 1    MANTNDTSIPVSILPPSTTI--ISVKLDGSHNYLAWKMQFLNLLRGHDLMGFIDGTEACP 58

Query: 2204 PLTITSASGETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAF 2025
            P    S S     NP YV W   D  LLG + ++LSE+ ++ +    +S+  WTAL++ F
Sbjct: 59   PKHTASGS----LNPAYVVWQKKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRF 114

Query: 2024 AHSSVSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLG 1845
            +  S SR                S  EY    K L DQL+A GKPVD+ D   + L GL 
Sbjct: 115  SSQSRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVDDQDLISFLLGGLQ 174

Query: 1844 ASFANFADTRMAMTPIPSFTTLLHQA--IQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXX 1671
            +S+  F  +    +    FT    QA  + ++ +        +T    F           
Sbjct: 175  SSYTPFVTSFNFASRETDFTFEDFQAELLGYENLLDVNHSVHNTDGPHFAFAANKSKAPT 234

Query: 1670 XXXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPL 1494
                       P  P                          +P CQIC K  H A  C  
Sbjct: 235  YVQKKG----PPLPPTKMQNAASSNYRSQQTRSTPSQLPNNRPVCQICGKSGHTAIDCFH 290

Query: 1493 YLGRDYSN---PANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPY---SX 1332
                 Y     P +LA A  +  N +     W++DSGA+AH+TSD + L + QP+     
Sbjct: 291  RFDYSYQGRFPPQDLA-AMVAETNATFDHQVWYMDSGANAHITSDATNLTHQQPFCESET 349

Query: 1331 XXXXXXXXXNALXXXXXXXXXXXHDVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDH 1152
                       L            +  L  +L  P    NL+SI++   D     + + +
Sbjct: 350  VTVGNGSGLQVLNTGSTTFNFGQSNFHLNKILHCPQAATNLISINQFCLDNNCYFILTAN 409

Query: 1151 TFLIQNRATKQTIAQGHLDRGLYVL---DRGTPALLAAVSSSRSKASFELWHLRLGHVPF 981
             F+++   T + + QG ++ GLY L        +L    ++   +A+ + WH RLGH   
Sbjct: 410  GFVVKENLTGRILLQGVVENGLYPLAGCKTFHKSLTCLSTTIGVRANADTWHSRLGHPSS 469

Query: 980  HIISLLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAP 801
             I + L     LSV       + CS CQL K+K+L F  + +++   L L+H D+W  +P
Sbjct: 470  VIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSVPLALIHSDVW-VSP 528

Query: 800  ITTAEGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGS 621
            + +  G  YYV F+DD+SR++W+YPL  KS+ F  F+KF       FS S+KQ Q+D G 
Sbjct: 529  VQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFATFVKFKTIAEKLFSTSIKQIQTDNGG 588

Query: 620  EFRNTHVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDA 441
            EF +   + F+  +GI HR++CP+T QQNG VERKHRHI E GL++L  +      W DA
Sbjct: 589  EFTSNQFKQFLTAQGIFHRLTCPHTSQQNGIVERKHRHIQEMGLTLLAQSSLSPQYWVDA 648

Query: 440  FATAVYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSP 261
            F T+V++INRLP+ +LDN +P+ LL    P Y + + FGC  +P LR    HKL  RS  
Sbjct: 649  FLTSVFLINRLPTKVLDNLTPYFLLHKTEPTYMDLRVFGCACYPLLRPYNDHKLTFRSKK 708

Query: 260  CIFLGYSSAYKGFRCYDPATSRTYITRNAQFDEHCFP------FATSGVTTP 123
            CIFLGYS+  KG+RC D AT R YI+R+  FDEH FP      + TS  T P
Sbjct: 709  CIFLGYSNCQKGYRCLDLATKRVYISRHVIFDEHSFPAKELAEYTTSRRTNP 760


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  399 bits (1025), Expect = e-108
 Identities = 255/756 (33%), Positives = 369/756 (48%), Gaps = 12/756 (1%)
 Frame = -2

Query: 2372 MAGTSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTI 2193
            MA  SS + +    +    VS KL+  NYLLWK Q +P + + QL   + G E  PP TI
Sbjct: 1    MAMQSSLSTSAIPTSFAIPVSEKLTKGNYLLWKAQVLPAIRAAQLDDILTGVEICPPKTI 60

Query: 2192 TSASGETIS--NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAH 2019
            + AS  T++  NP Y +W + DQ +LG L S+LS E ++ VV+C++S + WT L   ++ 
Sbjct: 61   SDASDRTVTVANPAYGRWIARDQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSS 120

Query: 2018 SSVSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGAS 1839
             S +R                SV EY ++ +   D+L A GKP+D+ +   + L GL   
Sbjct: 121  HSRARKVNTRIALATTKKGASSVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDED 180

Query: 1838 FANFADTRMA----MTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXX 1671
            F       +A    +TP   +T LL    +  L T +     S+   A            
Sbjct: 181  FNPLVTAVVARSDPITPGDLYTQLLSYENRMHLQTGSSSLMQSS---ANARSPGRGMSWG 237

Query: 1670 XXXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPL 1494
                  F+                                 +PRCQ+C +  H A  C  
Sbjct: 238  RSGGRGFSRGRGRGRGPSRGGFQSFGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWY 297

Query: 1493 YLGRDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXX 1314
                +Y      A    S+ + +G +  W+ D+GA+ H+T DL  L     Y+       
Sbjct: 298  RFDENYVPDQRSAN---SAAHQNGSNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIA 354

Query: 1313 XXXNALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFL 1143
                 +                + L  VL VP   KNL+S+ +LTND  V + F    FL
Sbjct: 355  ANGTGMTISNIGNAIVPTSSRSLHLRSVLHVPSTHKNLISVHRLTNDNDVFIEFHSSHFL 414

Query: 1142 IQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLL 963
            I++R TK  +  G    GLY L    P L    + S ++   E WH RLGH    I+  +
Sbjct: 415  IKDRQTKAVLLHGKCRDGLYPLPPH-PDLRLKHNFSSTRVPLEHWHKRLGHPSRDIVHRV 473

Query: 962  NKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEG 783
                +L   S   T  +C  C  AK+ +L +T++  ++ + L L+  D++GPA I +   
Sbjct: 474  ISNNNLPCLSNNSTTSVCDACLQAKAHQLPYTISMSQSSAPLMLIFSDVFGPA-IDSFGR 532

Query: 782  YRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFR--N 609
            Y+YYV+F+DD+S+FTWIY LR KS+ +  F +F   V   F   +  FQSD G E+   N
Sbjct: 533  YKYYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLN 592

Query: 608  THVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATA 429
             H +T     GIHH++SCP+T QQNG  ERKHRHI+E GL++L  +  P   W  AF  A
Sbjct: 593  AHFKTI----GIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAA 648

Query: 428  VYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFL 249
            VY+INR PS  + + +P   L G  P Y + + FGC  +P LR    HKL  RS+ C+FL
Sbjct: 649  VYLINRTPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFL 708

Query: 248  GYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPFAT 141
            GYS+ +KGF+C D +T R YI+R+  FDEH FPFA+
Sbjct: 709  GYSNMHKGFKCLDISTGRIYISRDVVFDEHVFPFAS 744


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  398 bits (1022), Expect = e-108
 Identities = 256/773 (33%), Positives = 384/773 (49%), Gaps = 22/773 (2%)
 Frame = -2

Query: 2363 TSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSA 2184
            +SS  +++ + ++ H + IKL  SNY+LWK Q   ++ +     ++ G++  PP  + + 
Sbjct: 14   SSSNHNSVSLLSLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPTG 73

Query: 2183 SGETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSR 2004
                  NP++V+W   D+ +L  ++STL+ + M ++V   +S  AW AL   F+ SS +R
Sbjct: 74   D----LNPDFVQWRRFDRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKAR 129

Query: 2003 THQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFA 1824
              Q             ++ +Y  + K + D L+AVG+PV E D     L GLG  + +  
Sbjct: 130  IMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIV 189

Query: 1823 DTRMAMTPIPSFTTLLHQAIQFD--LMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSF 1650
             +  A     S  ++    +  +  L  +   PTD +   A                  +
Sbjct: 190  ASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDPSFASAHMASXPSRQPNRPHQPRHY 249

Query: 1649 N----------GQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADK 1503
            +            S   P                          +P+CQ+C K  H A K
Sbjct: 250  HHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGHTAIK 309

Query: 1502 CPLYLGRDY--SNPANLAEA-FTSSCNVSGPS--SDWFVDSGASAHMTSDLSTLDNVQPY 1338
            C      +Y  +N   LA+A F+ +   + P     WF D+GA+ H++    TL  VQPY
Sbjct: 310  CYHRFDINYQGNNGVPLAQAPFSHAMXAAAPDHQDSWFFDTGATHHLSHSAQTLSCVQPY 369

Query: 1337 SXXXXXXXXXXNALXXXXXXXXXXXHDVQ---LLDVLVVPHITKNLLSISKLTNDYPVDV 1167
            S          N+L              +   L  VL VPH++ NL+S+SK   D  V  
Sbjct: 370  SGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLISVSKFCTDNAVFF 429

Query: 1166 LFSDHTFLIQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHV 987
             F    F ++++ TK+ + +G L  GLY     +P      + S S  +  +WH RLGH 
Sbjct: 430  EFHSSCFFVKDQVTKKILLKGWLRDGLYEFSSSSPPRAFVTTGSFSDGA--IWHSRLGHP 487

Query: 986  PFHIISLLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGP 807
               I+S      + SVT  +     C  C LAKS  L ++L+   A   L L+H DLWGP
Sbjct: 488  AVPILSKALASCNPSVTLQINKIAPCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGP 547

Query: 806  APITTAEGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDG 627
            AP T+  G RY++ F+DD+SR TWIY L  K +    FI F   V NQ   ++K  QSD 
Sbjct: 548  APSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDN 607

Query: 626  GSEFRNTHVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWF 447
            G EF     + ++E  GI H+ SCP+TPQQNGR ERK RH++ETGL+++  +  P+  W 
Sbjct: 608  GGEF--LAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWT 665

Query: 446  DAFATAVYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRS 267
             AF TAVY+IN LP+ +L  +SP + LF ++P Y + + FGC  FP LR    HKL  RS
Sbjct: 666  YAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRS 725

Query: 266  SPCIFLGYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPF-ATSGVTTPSPKL 111
            + C+FLGY+ A+KG+ C D +T+R YI+RN  F E  FPF ++S  ++PSP L
Sbjct: 726  TACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQSSSPPSSPSPHL 778


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  396 bits (1018), Expect = e-107
 Identities = 257/788 (32%), Positives = 380/788 (48%), Gaps = 38/788 (4%)
 Frame = -2

Query: 2369 AGTSSTADTLPIATMI-HMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTI 2193
            +G SST  ++P   M+ H + +KL  +NY+LW+ Q   ++ +     F++G+   P   +
Sbjct: 17   SGQSSTMASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDL 76

Query: 2192 TSASGETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSS 2013
            +      + NP +V W   D+ +L  ++S+L+   M +++   +S +AW ALES F+ SS
Sbjct: 77   SPG----VMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSS 132

Query: 2012 VSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASF- 1836
             +R  Q             S+ +Y  + K   D L+A+G+PV E D+    L GLG+ + 
Sbjct: 133  RARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYN 192

Query: 1835 -----ANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXX 1671
                  N  D ++++  I S        ++     + M    ++S               
Sbjct: 193  AVVTAINIRDDKISLEAIHSMLLAFEHRLEQQSSIEQMSANYASSS-------NNRGGGR 245

Query: 1670 XXXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKC-- 1500
                    G SP+                            KP+CQ+C K  H A  C  
Sbjct: 246  KFNGGRGQGYSPNN-NNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYH 304

Query: 1499 ---------------PLYLGRDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDL 1365
                            L  G   + PA +A A  +  + S     W++DSGAS H+T +L
Sbjct: 305  RFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADES-----WYLDSGASHHLTQNL 359

Query: 1364 STLDNVQPYSXXXXXXXXXXNALXXXXXXXXXXXHDV---QLLDVLVVPHITKNLLSISK 1194
              L +  PY+            L                 +L  V  VP I+ NL+S++K
Sbjct: 360  GNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVAK 419

Query: 1193 LTNDYPVDVLFSDHTFLIQNRATKQTIAQGHLDRGLY---VLDRGTP-------ALLAAV 1044
              ++    + F  + F +++  TK  +AQG L+ GLY   V     P       +   + 
Sbjct: 420  FCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVFSNLKPYSSINNASAFHSQ 479

Query: 1043 SSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTL 864
             SS  +   ELWH RLGH  F I+S +  +   +V S      +CS CQLAKS RL   L
Sbjct: 480  FSSTVENKAELWHNRLGHASFDIVSKV--MNTCNVASGKYKSFVCSDCQLAKSHRLPTQL 537

Query: 863  NEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKF 684
            +   A   L+LV+ D+WGPA I +  G RY++ FVDD+SR+TW Y L+ K +   +F  F
Sbjct: 538  SNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKXF 597

Query: 683  HAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHHRISCPYTPQQNGRVERKHRHI 504
               + NQF   +K  QSD G EFR+    +F++  GI HR SCPY   QNGRVERKHRH+
Sbjct: 598  KLQMENQFDTKIKCLQSDNGGEFRS--FTSFLQAVGIAHRFSCPYNSXQNGRVERKHRHV 655

Query: 503  IETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFG 324
            +ETGL++L HA  P   W  AF T  ++INR+PS +L+  SP+  LF R P Y +F+ FG
Sbjct: 656  VETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYKSFRVFG 715

Query: 323  CRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPFA 144
            C  +P++R    HKL  RS  C+FLGYS  +KGF C D AT R YIT +  FDE  FP A
Sbjct: 716  CLCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFPLA 775

Query: 143  TSGVTTPS 120
             S  ++ S
Sbjct: 776  QSKSSSSS 783


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  395 bits (1014), Expect = e-107
 Identities = 255/773 (32%), Positives = 383/773 (49%), Gaps = 22/773 (2%)
 Frame = -2

Query: 2363 TSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSA 2184
            +SS  +++ + ++ H + IKL  SNY+LWK Q   ++ +     ++ G++  PP  + + 
Sbjct: 14   SSSNHNSVSLLSLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPTG 73

Query: 2183 SGETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSR 2004
                  NP++V+W   D+ +L  ++STL+ + M ++V   +S  AW AL   F+ SS +R
Sbjct: 74   D----LNPDFVQWRRFDRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKAR 129

Query: 2003 THQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFA 1824
              Q             ++ +Y  + K + D L+AVG+PV E D     L GLG  + +  
Sbjct: 130  IMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIV 189

Query: 1823 DTRMAMTPIPSFTT-----LLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXX 1659
             +  A     S  +     L H+       +   DP+ +++ MA                
Sbjct: 190  ASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDPSFASAHMASVPSRQPNRPHQPRHY 249

Query: 1658 XS-------FNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADK 1503
                      +  S   P                          +P+CQ+C K  H A K
Sbjct: 250  HHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGHTAIK 309

Query: 1502 CPLYLGRDY--SNPANLAEA-FTSSCNVSGPS--SDWFVDSGASAHMTSDLSTLDNVQPY 1338
            C      +Y  +N   LA+A F+ +   + P     WF D+GA+ H++    TL  VQPY
Sbjct: 310  CYHRFDINYQGNNGVPLAQAPFSHAMLAAAPDHQDSWFFDTGATHHLSHSAQTLSCVQPY 369

Query: 1337 SXXXXXXXXXXNALXXXXXXXXXXXHDVQ---LLDVLVVPHITKNLLSISKLTNDYPVDV 1167
            S          N+L              +   L  VL VPH++ NL+S+SK   D  V  
Sbjct: 370  SGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLISVSKFXTDNAVFF 429

Query: 1166 LFSDHTFLIQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHV 987
                  F ++++ TK+ + +G L  GLY     +P      + S S  +  +WH RLGH 
Sbjct: 430  EXHSSCFFVKDQVTKKILLKGWLRDGLYEFSSSSPPRAFVTTGSFSDGA--IWHSRLGHP 487

Query: 986  PFHIISLLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGP 807
               I+S      + SVT  +     C  C LAKS  L ++L+   A   L L+H DLWGP
Sbjct: 488  AVPILSKALASCNPSVTLQINKIAPCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGP 547

Query: 806  APITTAEGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDG 627
            AP T+  G RY++ F+DD+SR TWIY L  K +    FI F   V NQ   ++K  QSD 
Sbjct: 548  APSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDN 607

Query: 626  GSEFRNTHVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWF 447
            G EF     + ++E  GI H+ SCP+TPQQNGR ERK RH++ETGL+++  +  P+  W 
Sbjct: 608  GGEF--LAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWT 665

Query: 446  DAFATAVYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRS 267
             AF TAVY+IN LP+ +L  +SP + LF ++P Y + + FGC  FP LR    HKL  RS
Sbjct: 666  YAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRS 725

Query: 266  SPCIFLGYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPF-ATSGVTTPSPKL 111
            + C+FLGY+ A+KG+ C D +T+R YI+RN  F E  FPF ++S  ++PSP L
Sbjct: 726  TACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQSSSPPSSPSPHL 778


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  389 bits (1000), Expect = e-105
 Identities = 234/751 (31%), Positives = 363/751 (48%), Gaps = 7/751 (0%)
 Frame = -2

Query: 2372 MAGTSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTI 2193
            MA +SS+       +  H VS KL   N+ LWK Q    +   +L G + G+   P   +
Sbjct: 1    MASSSSSGTAAVNLSQGHSVSEKLGKGNHALWKAQVSAAVRGARLQGHLTGAVKAPDAEL 60

Query: 2192 T-SASGETIS--NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFA 2022
            + +  G+T +  NP +  W + DQ +LG L S+LS + + +V  C ++  AW A+E  ++
Sbjct: 61   SVTIDGKTTTKPNPAFEDWDANDQLVLGYLLSSLSRDVLIQVATCKTAAEAWRAIEGLYS 120

Query: 2021 HSSVSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGA 1842
              + +R                 + EY ++ +AL D+++A G+P+DE D   + + GL  
Sbjct: 121  TGTRARAVNTRLALTNTKKGTMKIAEYVAKMRALGDEMAAGGRPLDEEDLVQYIIAGLNE 180

Query: 1841 SFANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXX 1662
             F+         +   +   L  Q + F+ +      T S    AF              
Sbjct: 181  DFSPIVSNLCNKSDPITVGELYSQLVNFETLLDLYRST-SQGGAAFVANRGRGGGGGGRG 239

Query: 1661 XXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485
              +  G S +                           R+P CQ+C K  H A  C     
Sbjct: 240  GNNNGGHSSNGSGGRGAPRGRSGGQARGRGRGLGGQDRRPTCQVCFKRGHTAADCWYRFD 299

Query: 1484 RDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXX 1305
             DY     LA A T+S  +    ++W++D+GA+ H+T +L  L   + Y+          
Sbjct: 300  EDYVADEKLAAAATNSYGID---TNWYIDTGATDHITGELEKLTTKEKYNGNEQIHTASG 356

Query: 1304 NALXXXXXXXXXXXH---DVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQN 1134
              +               ++ L +VL VP   K+L+S S+L  D    +      F I++
Sbjct: 357  AGMDISHIGHTTVHTPSRNIHLNNVLYVPQAKKSLISASQLATDNSAFLELHSKFFSIKD 416

Query: 1133 RATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKL 954
            + TK  + +G    GLY + +      +  +   +K S   WH RLGH    I+  +   
Sbjct: 417  QVTKDILLEGRCRHGLYPIPKSFGRTTSKQALGTTKLSLSRWHSRLGHPSLPIVKQVISK 476

Query: 953  GHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRY 774
             +L  +       +C+ CQ AKS++L +  +   +   L+LV  D+WGPAP +     +Y
Sbjct: 477  NNLPCSVESVNQSVCNACQEAKSRQLPYVRSTSVSQFPLELVFSDVWGPAPESVGRN-KY 535

Query: 773  YVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRT 594
            YV+F+DDFS+FTWIY L+ KSE F  F +F A V   F   +   Q+D G E++   + +
Sbjct: 536  YVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQK--LNS 593

Query: 593  FMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVIN 414
            F    GI H +SCP+T QQNG  ERKHRHIIE GLS+L +A  P   W +AF  A Y+IN
Sbjct: 594  FFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLIN 653

Query: 413  RLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSA 234
            R+PS  + N +P E LF + P Y + + FGC  +P+LR    HKL  RS  C+FLG+S+ 
Sbjct: 654  RVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTH 713

Query: 233  YKGFRCYDPATSRTYITRNAQFDEHCFPFAT 141
            +KGF+C D ++ R YI+R+  FDE+ FPF+T
Sbjct: 714  HKGFKCLDVSSGRVYISRDVVFDENIFPFST 744


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  382 bits (980), Expect = e-103
 Identities = 233/731 (31%), Positives = 352/731 (48%), Gaps = 8/731 (1%)
 Frame = -2

Query: 2315 VSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSASGE---TISNPEYVKW 2145
            VS KL  SN+ +WK Q +  +   +L G + G +  P   +    GE    +SNPEY +W
Sbjct: 18   VSEKLGKSNHAVWKAQILATIRGARLEGHLTGDDQPPAPILRRKEGEKEVVVSNPEYEEW 77

Query: 2144 FSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTHQXXXXXXXXXX 1965
             +TDQ++L  L S+++++ + +V  C ++ +AW+ ++  F   + +RT            
Sbjct: 78   VATDQQVLAYLLSSMTKDLLVQVATCRTAASAWSMIQGMFGSMTRARTINTRLSLSTLQK 137

Query: 1964 XXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADTRMAMTPIPSFT 1785
               ++  Y  + +AL D L AVGKPVD+ +   +   GL   F     T +      +  
Sbjct: 138  GDMNITTYVGKMRALADDLMAVGKPVDDDELIGYIFAGLDDEFEPVISTIVGRPDPVTIG 197

Query: 1784 TLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFNGQSPHTPXXXXXXX 1605
                Q I F+         D +S  + +                 N +    P       
Sbjct: 198  ETYAQLISFEQRLAHRRSGDQSSVNSASRSRGQPQRGGSRSGGDSN-RGRGAPSNGANRG 256

Query: 1604 XXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRDYSNPANLAEAFTSSCNV 1428
                               +P+CQ+C K  H    C      ++       E F  +   
Sbjct: 257  RGRGNPSGGRANVGGGTDNRPKCQLCYKRGHTVCDCWYRYDENFVPD----ERFAGTAVS 312

Query: 1427 SGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXXXXXXXXXXH---D 1257
             G  ++W++D+GA+ H+T +L  L     Y             +               +
Sbjct: 313  YGVDTNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTASGAGMEISHIGNSVVKTPSRN 372

Query: 1256 VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTIAQGHLDRGLYVL 1077
            + L DVL VP   KNL+S  KLT+D    +      F I++ A ++T+ +G   +GLY L
Sbjct: 373  LHLKDVLYVPKANKNLVSAYKLTSDNLAFIELYRKFFFIKDLAMRRTLLRGRCHKGLYAL 432

Query: 1076 DRGTPALLAAVSS-SRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVLPTPKLCSPC 900
               +            +K SFE WH RLGH  + ++  + K  +L    V     +C  C
Sbjct: 433  PSPSSHHHQVKQVYGVTKPSFERWHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVSVCDAC 492

Query: 899  QLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFSRFTWIYPLR 720
            Q AKS +LSF  +   +   L+LV  D+WGPAP +     +YYV+F+DD+S+FTWIY L+
Sbjct: 493  QKAKSHQLSFPKSTSESKYPLELVFSDVWGPAPQSVGNN-KYYVSFIDDYSKFTWIYLLK 551

Query: 719  AKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHHRISCPYTPQ 540
             KSE F+ F +F + V   F+  +   Q+D G E++  H  +F    GI H +SCP+T Q
Sbjct: 552  YKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLH--SFFNKVGITHHVSCPHTHQ 609

Query: 539  QNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPILDNKSPFELLFG 360
            QNG  ERKHRHI+E GL++L ++  P   W +AF +AVY+INR PS +L + SP E L G
Sbjct: 610  QNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLG 669

Query: 359  RVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRCYDPATSRTYITR 180
              P Y   + FGC  +P LR    HKL  RS+ C FLGYS+ +KGF+C DP+T R YI+R
Sbjct: 670  HKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISR 729

Query: 179  NAQFDEHCFPF 147
            +  FDE  FPF
Sbjct: 730  DVVFDETQFPF 740