BLASTX nr result
ID: Mentha29_contig00023098
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha29_contig00023098 (2688 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] 734 0.0 emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 672 0.0 emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 563 e-157 emb|CBI36090.3| unnamed protein product [Vitis vinifera] 541 e-151 gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 499 e-138 gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 495 e-137 emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 483 e-133 emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 455 e-125 gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 446 e-122 gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 446 e-122 gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 443 e-121 gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 435 e-119 emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 419 e-114 emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 404 e-110 pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 399 e-108 emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 398 e-108 emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 396 e-107 emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 395 e-107 gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 389 e-105 gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 382 e-103 >emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] Length = 1453 Score = 734 bits (1894), Expect = 0.0 Identities = 375/749 (50%), Positives = 489/749 (65%), Gaps = 2/749 (0%) Frame = -2 Query: 2330 TMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSASGETISNPEYV 2151 TMIHM++IKLSS+NYLLW+ Q +P+L LL V+GS PP+TI S + NP+YV Sbjct: 10 TMIHMITIKLSSTNYLLWRNQLLPLLQCQNLLSHVDGSVAPPPITIAVDSSSSQPNPQYV 69 Query: 2150 KWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTHQXXXXXXXX 1971 W DQRLL +LFS+L+EEAMTEV+ T++R W ALE++F+H S + + Sbjct: 70 AWQLQDQRLLSLLFSSLTEEAMTEVLGLTTARDVWLALENSFSHISKTCELRIKDDLQLI 129 Query: 1970 XXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADTRMAMTPIPS 1791 SV EY FKALCDQL+A+G+ VD++DK HW+LRGLGA FANF+ +M++TP+P Sbjct: 130 KRGTRSVTEYSRSFKALCDQLTAMGRSVDDTDKVHWYLRGLGADFANFSTAQMSLTPLPV 189 Query: 1790 FTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFNGQSPHTPXXXXX 1611 F L+ +A F++ K++ S+ P SF+ P P Sbjct: 190 FKDLVPKAESFEIFQKSLG---SSFPFL--------------QVPSFSRWLPWRPWTWTF 232 Query: 1610 XXXXXXXXXXXXXXXXXXXXRKPRCQICKGE-HYADKCPLYLGRDYSNPANLAEAFTSSC 1434 PRCQICK E H AD+C R A LAEAFT++C Sbjct: 233 ----------------------PRCQICKTEGHTADRCRSRYDRAEPT-AQLAEAFTTTC 269 Query: 1433 NVS-GPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXXXXXXXXXXHD 1257 ++S G SDWF D+GASAHMT D S LD V+PY +L + Sbjct: 270 SLSNGSESDWFTDTGASAHMTPDPSQLDKVEPYHGKDCVIVGNGASLPITHTGTLSSSSN 329 Query: 1256 VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTIAQGHLDRGLYVL 1077 +QLLDVLVVP +TKNLLSISKLT+D+P+ V FS F++QNR T +A+G GLYVL Sbjct: 330 LQLLDVLVVPRLTKNLLSISKLTSDFPLSVTFSHDNFVVQNRITGMAVAKGKRAGGLYVL 389 Query: 1076 DRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVLPTPKLCSPCQ 897 +RG A + + + ASFELWH RLGHV I+SLLNK G L +TS+LPTP LCS CQ Sbjct: 390 ERGHSAFASVLRNKNLHASFELWHARLGHVNHSILSLLNKKGQLFLTSLLPTPSLCSTCQ 449 Query: 896 LAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFSRFTWIYPLRA 717 LAKS RL F+ N R++ +L LVHCD+WG AP+ + G+ YYV F+DD+SRFTW+YPL+ Sbjct: 450 LAKSHRLPFSSNTTRSNVVLGLVHCDIWGLAPVKSNLGFNYYVLFIDDYSRFTWLYPLKL 509 Query: 716 KSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHHRISCPYTPQQ 537 KS+FF++F++F V NQ+S +K FQSDGG+EF + ++ ++ GIHH++SCPYTP Q Sbjct: 510 KSDFFDIFLQFQKLVENQYSTKIKIFQSDGGAEFTSNRFQSHLQQFGIHHQMSCPYTPSQ 569 Query: 536 NGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPILDNKSPFELLFGR 357 NGR ERKHRH+ ETGL++LFH+H P W DAF+TA Y+INRLP P+L SPFE+LFG+ Sbjct: 570 NGRAERKHRHVTETGLALLFHSHVPPRYWVDAFSTATYIINRLPLPVLGGLSPFEVLFGK 629 Query: 356 VPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRCYDPATSRTYITRN 177 P Y NF PFGCRV+P LRD APHK +PRS PCIFLGYSS++KGFRC+D TSRTYITR+ Sbjct: 630 SPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGFRCFDTTTSRTYITRH 689 Query: 176 AQFDEHCFPFATSGVTTPSPKLDFTSFYE 90 A+FDEH FPF+ + T + ++F+E Sbjct: 690 ARFDEHFFPFSNTSSATSIADIGLSNFFE 718 >emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] Length = 1501 Score = 672 bits (1734), Expect = 0.0 Identities = 355/759 (46%), Positives = 468/759 (61%), Gaps = 2/759 (0%) Frame = -2 Query: 2360 SSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181 S ++ LP T+IHM++IKLSSSNYLLWK Q +P+L S LL +V+G+ VPP + Sbjct: 3 SESSHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTL-VPPPRFEPET 61 Query: 2180 GETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRT 2001 T+S +Y+ W + DQRLL +L S+L+EEA+ VV +++R W ALE+ F+H S +R Sbjct: 62 STTLST-KYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKARE 120 Query: 2000 HQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFAD 1821 + V EY FK LCDQL A+G+PV+++DK HWFLRG F F Sbjct: 121 LRLKDDLQLMKCGTKPVAEYARTFKTLCDQLHAIGRPVEDTDKVHWFLRGTRPRFFQFFY 180 Query: 1820 TRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFNGQ 1641 + TT A T T +P AF N Sbjct: 181 SSNXSLESSEPTTAAFTA------TNRSRTTSHGTPFAFRNNQRGRSHSH-------NNN 227 Query: 1640 SPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQICKGE-HYADKCPLYLGRDYSNPA 1464 S + R PRCQIC+ E HYAD+C R S+ A Sbjct: 228 SSNR-----------------GRTYSGHGRRPPRCQICRIEGHYADRCNQRYARTDSS-A 269 Query: 1463 NLAEAFTSSCNVSGP-SSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXX 1287 +LAEAF +SC++SGP ++DWF+D+GASAHMT+D S LD + Y +L Sbjct: 270 HLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSXLDQSKNYMGKDSVIVGNGASLPIT 329 Query: 1286 XXXXXXXXHDVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTIAQ 1107 ++ LLDVLVV H+TKNLLSISKLT+D+P+ V F+++ F +QNR T + +A Sbjct: 330 HTGTLSPVPNIHLLDVLVVXHLTKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTGRXVAT 389 Query: 1106 GHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVL 927 G D GLYVL+RG A ++ + + +AS++LWH RLGH LS+TS+L Sbjct: 390 GKRDGGLYVLERGNSAFISVLKNKSLRASYDLWHARLGH--------------LSLTSLL 435 Query: 926 PTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFS 747 P+P LCS CQLAK+ RL ++ NE R+ +LDL+HCDLWGP+PI + G+ YYV F+DD+S Sbjct: 436 PSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYVIFIDDYS 495 Query: 746 RFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHH 567 RFTW+YPL+ KS+FF++F++F FV NQ S +K FQSDGG+EF NT + + T GIHH Sbjct: 496 RFTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLRTSGIHH 555 Query: 566 RISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPILDN 387 ++SCPYTP QNGR ERKHRH+ ETGL++LFH+H W DAF+TA Y+INRLP+P+L Sbjct: 556 QLSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSPRFWVDAFSTATYIINRLPTPLLGG 615 Query: 386 KSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRCYDP 207 KSPFELL+G P+Y NF PFGCRV+P LRD P+KL+PRS PCIFLGYS ++KGFRC DP Sbjct: 616 KSPFELLYGXSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIPCIFLGYSPSHKGFRCLDP 675 Query: 206 ATSRTYITRNAQFDEHCFPFATSGVTTPSPKLDFTSFYE 90 TSR YITR+AQFDE FP S P L ++F E Sbjct: 676 TTSRLYITRHAQFDETHFPTVPSSQAQPLSSLHISNFLE 714 >emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] Length = 1239 Score = 563 bits (1450), Expect = e-157 Identities = 287/642 (44%), Positives = 403/642 (62%), Gaps = 1/642 (0%) Frame = -2 Query: 2360 SSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181 S ++ LP T+IHM++IKLSSSNYLLWK Q +P+L S LL +V+G+ VPP + Sbjct: 3 SESSHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTL-VPPPRFEPET 61 Query: 2180 GETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRT 2001 T+S +Y+ W + DQRLL +L S+L+EEA+ VV +++R W ALE+ F+H S +R Sbjct: 62 STTLST-KYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKARE 120 Query: 2000 HQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFAD 1821 + V EY FK LCDQL A+G+PV+++DK HWF RGLG F++F+ Sbjct: 121 LRLKDDLQLMKRGTKPVAEYARTFKTLCDQLHAIGRPVEDTDKVHWFFRGLGPDFSSFST 180 Query: 1820 TRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFNGQ 1641 +M++TP+P F L+ +A F+L ++++ ++ T+ AFT N Q Sbjct: 181 AQMSLTPLPYFADLVSKAESFELFQRSLESSEPTTA-AFTATNRSRTTSHGTPFAFRNNQ 239 Query: 1640 SPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQICKGEHYADKCPLYLGRDYSNPAN 1461 + R + HYAD+C R S+ A+ Sbjct: 240 RGRS--------------------HSHNNNSSNRGRTYSEGHYADRCNQRYARTDSS-AH 278 Query: 1460 LAEAFTSSCNVSGP-SSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXXX 1284 LAEAF +SC++SGP ++DWF+D+GASAHMT+D S LD + Y +L Sbjct: 279 LAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGVSLPITH 338 Query: 1283 XXXXXXXHDVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTIAQG 1104 ++ LLDVLVVPH+TKNLLSISKLT+D+P+ V F+++ F +QNR T + +A G Sbjct: 339 TGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTGRVVATG 398 Query: 1103 HLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVLP 924 D GLYVL+ G A ++ + + +AS++LWH RLGHV + +IS LNK GHLS+TS+LP Sbjct: 399 KRDGGLYVLECGNSAFISVLKNKSLRASYDLWHARLGHVNYSVISFLNKKGHLSLTSLLP 458 Query: 923 TPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFSR 744 +P LCS CQLAK+ RL ++ NE R+ +LDL+HCDLWGP+PI + G+ YYV F+DD+SR Sbjct: 459 SPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYVIFIDDYSR 518 Query: 743 FTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHHR 564 FTW+YPL+ KS+FF++F++F FV NQ S +K FQSDGG+EF NT + + T GIHH+ Sbjct: 519 FTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLRTSGIHHQ 578 Query: 563 ISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAF 438 +SCPYT QNGR ERKHRH+ ETGL++LFH H W + F Sbjct: 579 LSCPYTXAQNGRAERKHRHVTETGLALLFHXHLSPRFWVERF 620 >emb|CBI36090.3| unnamed protein product [Vitis vinifera] Length = 1273 Score = 541 bits (1394), Expect = e-151 Identities = 269/549 (48%), Positives = 365/549 (66%), Gaps = 2/549 (0%) Frame = -2 Query: 1862 FLRGLGASFANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXX 1683 FLRGLG F+NF+ +M++TP+P F L+ +A F+L ++++ ++ T+ AFT Sbjct: 729 FLRGLGPDFSNFSTAQMSLTPLPYFADLVSKAESFELFQRSLESSEPTTA-AFTATNRSR 787 Query: 1682 XXXXXXXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQICKGE-HYAD 1506 N Q + R PRCQI + E HYAD Sbjct: 788 TTSHGTPFAFRNNQRGRS-------HSHNNNSSNRGRTYSGHGRRPPRCQISRIEGHYAD 840 Query: 1505 KCPLYLGRDYSNPANLAEAFTSSCNVSGP-SSDWFVDSGASAHMTSDLSTLDNVQPYSXX 1329 +C R S+ A+LAEAF +SC++SGP ++DWF+D+GASAHMT+D S LD + Y Sbjct: 841 RCNQRYARTDSS-AHLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGK 899 Query: 1328 XXXXXXXXNALXXXXXXXXXXXHDVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHT 1149 +L ++ LLDVLVVPH+ KNLLSISKLT+D+P+ V F+++ Sbjct: 900 DSVIVGNGASLPITHTGTLSSVPNIHLLDVLVVPHLIKNLLSISKLTSDFPLSVTFTNNL 959 Query: 1148 FLIQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIIS 969 F +QNR T + +A G D GLYVL+RG A ++ + + +AS++LWH RLGHV + +IS Sbjct: 960 FTVQNRQTGRVVATGKRDGGLYVLERGNSAFISVLKNKSLRASYDLWHARLGHVNYFVIS 1019 Query: 968 LLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTA 789 L+K GHLS+ S+LP+P LCS CQLAK+ RL ++ NE R+ +LDL+HCDL GP+PI + Sbjct: 1020 FLHKKGHLSLMSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLPGPSPIKSN 1079 Query: 788 EGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRN 609 G+ YYV F+DD+SRFTW+YPL+ KS+FF++F++F FV NQ +K FQSDGG+EF N Sbjct: 1080 SGFLYYVIFIDDYSRFTWLYPLKFKSDFFDIFLQFKKFVENQHFARIKVFQSDGGAEFTN 1139 Query: 608 THVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATA 429 T + + T GIHH++SCPYTP QNGR ERKHRH+ ETGL++LFH+H W DAF+TA Sbjct: 1140 TCFKAHLRTSGIHHQLSCPYTPAQNGRAERKHRHVTETGLTLLFHSHLSPRFWVDAFSTA 1199 Query: 428 VYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFL 249 Y+INRLP+P+L KSPFELL+G P+Y NF PFGCRV+P LRD P+KL+PRS PCIFL Sbjct: 1200 TYIINRLPTPLLGGKSPFELLYGYSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIPCIFL 1259 Query: 248 GYSSAYKGF 222 GYS ++KGF Sbjct: 1260 GYSPSHKGF 1268 >gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] Length = 1453 Score = 499 bits (1286), Expect = e-138 Identities = 284/749 (37%), Positives = 397/749 (53%), Gaps = 14/749 (1%) Frame = -2 Query: 2351 ADTLPIATMIHM---VSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181 AD P +H+ V++KL+ SNYLLWK QF +L+ +L+GFVNG PP T+ + Sbjct: 2 ADPYPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSCHKLIGFVNGGITPPPRTLNVVT 61 Query: 2180 GET---ISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSV 2010 G+T ++NP+Y WF TDQ + LF TLSEE + V + +SR W +L F SSV Sbjct: 62 GDTSVDVANPQYESWFCTDQLIRSWLFGTLSEEVLGYVHNLQTSRDIWISLAENFNKSSV 121 Query: 2009 SRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASF-- 1836 +R ++ Y F A+CD LS++GKPVDES K FL GLG + Sbjct: 122 AREFTLRRTLQLLSKKDKTLSAYCREFIAVCDALSSIGKPVDESMKIFGFLNGLGREYDP 181 Query: 1835 -ANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXX 1662 + ++ P+F ++ + FD+ ++ + + + +P MAF Sbjct: 182 ITTVIQSSLSKISPPTFRDVISEVKGFDVKLQSYEESVTANPHMAFNTQRSEYTDNYTSG 241 Query: 1661 XXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485 G+ + +P CQIC + H A KC Sbjct: 242 NRG-KGRGGYGQNRGRSGYSTRGRGFSQHQTNSNNTGERPVCQICGRTGHTALKCYNRFD 300 Query: 1484 RDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXX 1305 +Y + + A+AF+S +W DS A+AH+TS + L PY+ Sbjct: 301 HNYQS-VDTAQAFSSLRVSDSSGKEWVPDSAATAHVTSSTNNLQAASPYNGSDTVLVGDG 359 Query: 1304 NALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQN 1134 L D + L +VLV P I K+LLS+SKL +DYP V F + I + Sbjct: 360 AYLPITHVGSTTISSDSGTLPLNEVLVCPDIQKSLLSVSKLCDDYPCGVYFDANKVCIID 419 Query: 1133 RATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKL 954 T++ +++G GLYVL+ +A S+ + AS E+WH RLGH I+ L Sbjct: 420 INTQKVVSKGPRSNGLYVLEN--QEFVAFYSNRQCAASEEIWHHRLGHSNSRILQQLKSS 477 Query: 953 GHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRY 774 +S +P +C PCQ+ KS +L F + R +L +HCDLWGP+P+ + +G++Y Sbjct: 478 KEISFNKSRMSP-VCEPCQMGKSSKLQFFSSNSRELDLLGRIHCDLWGPSPVVSKQGFKY 536 Query: 773 YVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRT 594 YV FVDD+SR++W YPL+AKS+FF VF+ F V NQF+ +K FQSDGG EF + ++ Sbjct: 537 YVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKK 596 Query: 593 FMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVIN 414 + GI HRISCPYTPQQNG ERKHRH +E GLSM+FH+H P W +AF TA ++ N Sbjct: 597 HLTDCGIQHRISCPYTPQQNGIAERKHRHFVELGLSMMFHSHTPLQFWVEAFFTASFLSN 656 Query: 413 RLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSA 234 LPSP L N SP E L + P Y + FG +P LR HK PRS C+FLGY+S Sbjct: 657 MLPSPSLGNVSPLEALLKQKPNYAMLRVFGTACYPCLRPLGEHKFEPRSLQCVFLGYNSQ 716 Query: 233 YKGFRCYDPATSRTYITRNAQFDEHCFPF 147 YKG+RC P T R YI+R+ FDE FPF Sbjct: 717 YKGYRCLYPPTGRVYISRHVIFDEETFPF 745 >gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from Arabidopsis thaliana BAC gb|AF080119 and is a member of the reverse transcriptase family PF|00078 [Arabidopsis thaliana] Length = 1415 Score = 495 bits (1274), Expect = e-137 Identities = 285/749 (38%), Positives = 395/749 (52%), Gaps = 14/749 (1%) Frame = -2 Query: 2351 ADTLPIATMIHM---VSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181 A + P +H+ V++KL+ SNYLLWK QF +L+S +L+GFVNG+ P + + Sbjct: 2 ATSYPFPDNVHVTSSVTLKLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVN 61 Query: 2180 GETIS---NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSV 2010 GE S NP Y WF TDQ + LF TLSEE + V + ++SR W +L F SSV Sbjct: 62 GEVTSEEPNPLYESWFCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSV 121 Query: 2009 SRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASF-- 1836 +R Y FK +CD LS++GKPVDES K FL GLG + Sbjct: 122 AREFSLRQNLQLLSKKEKPFSVYCREFKTICDALSSIGKPVDESMKIFGFLNGLGRDYDP 181 Query: 1835 -ANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXX 1662 + ++ P P+F ++ + FD ++ + S +P +AF Sbjct: 182 ITTVIQSSLSKLPTPTFNDVVSEVQGFDSKLQSYEEAASVTPHLAFNIERSESGSPQYNP 241 Query: 1661 XXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485 G+S +P CQIC + H A KC Y Sbjct: 242 NQKGRGRSGQNKGRGGYSTRGRGFSQHQSSPQVSGP--RPVCQICGRTGHTALKC--YNR 297 Query: 1484 RDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXX 1305 D + A + +AF++ +W DS A+AH+TS + L + Y Sbjct: 298 FDNNYQAEI-QAFSTLRVSDDTGKEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDG 356 Query: 1304 NALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQN 1134 L + L +VLVVP+I K+LLS+SKL +DYP V F + I + Sbjct: 357 TYLPITHTGSTTIKSSNGKIPLNEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIID 416 Query: 1133 RATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKL 954 T++ + G GLYVL+ +A S+ + A+ E+WH RLGH + L Sbjct: 417 LQTQKVVTTGPRRNGLYVLEN--QEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNS 474 Query: 953 GHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRY 774 + + +P +C PCQ+ KS RL F +++ R LD +HCDLWGP+P+ + +G +Y Sbjct: 475 KAIQINKSRTSP-VCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKY 533 Query: 773 YVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRT 594 Y FVDD+SR++W YPL KSEF +VFI F V NQ + +K FQSDGG EF + ++T Sbjct: 534 YAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKT 593 Query: 593 FMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVIN 414 + GIHHRISCPYTPQQNG ERKHRH++E GLSMLFH+H P W ++F TA Y+IN Sbjct: 594 HLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIIN 653 Query: 413 RLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSA 234 RLPS +L N SP+E LFG P Y + + FG +P LR A +K PRS C+FLGY+S Sbjct: 654 RLPSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQ 713 Query: 233 YKGFRCYDPATSRTYITRNAQFDEHCFPF 147 YKG+RC+ P T + YI+RN F+E PF Sbjct: 714 YKGYRCFYPPTGKVYISRNVIFNESELPF 742 >emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] Length = 1466 Score = 483 bits (1243), Expect = e-133 Identities = 282/749 (37%), Positives = 391/749 (52%), Gaps = 14/749 (1%) Frame = -2 Query: 2351 ADTLPIATMIHM---VSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS 2181 A P +H+ V++KL+ SNYLLWK QF +L+S +L+GFVNG P T + Sbjct: 2 APAYPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVN 61 Query: 2180 GETIS---NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSV 2010 + S NP+Y WF TDQ + LF TLSEE + V + T+SR W +L F SS+ Sbjct: 62 DDVTSEVPNPQYEDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSI 121 Query: 2009 SRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASF-- 1836 +R S+ Y FK +CD LS++GKPV+ES K FL GLG + Sbjct: 122 AREFSLRRNLQLLTKKDKSLSVYCRDFKIICDSLSSIGKPVEESMKIFGFLNGLGREYDP 181 Query: 1835 -ANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXX 1662 + ++ P P+F ++ + FD ++ D T S +P +AF Sbjct: 182 ITTVIQSSLSKLPAPTFNDVISEVQGFDSKLQSYDDTVSVNPHLAFNTERSNSGAPQYNS 241 Query: 1661 XXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485 G+S ++P CQIC + H A KC Sbjct: 242 NSRGRGRSGQN--RGRGGYSTRGRGFSQHQSASPSSGQRPVCQICGRIGHTAIKCYNRFD 299 Query: 1484 RDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXX 1305 +Y + +AF++ +W+ DS A+AH+T+ S L N Y Sbjct: 300 NNYQSEVP-TQAFSALRVSDETGKEWYPDSAATAHITASTSGLQNATTYEGNDAVLVGDG 358 Query: 1304 NALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQN 1134 L + L +VLV P I K+LLS+SKL +DYP V F + I + Sbjct: 359 TYLPITHVGSTTISSSKGTIPLNEVLVCPAIQKSLLSVSKLCDDYPCGVYFDANKVCIID 418 Query: 1133 RATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKL 954 T++ +++G + GLY+L+ +A S+ + AS E WH RLGH I+ L Sbjct: 419 LTTQKVVSKGPRNNGLYMLENSE--FVALYSNRQCAASMETWHHRLGHSNSKILQQLLTR 476 Query: 953 GHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRY 774 + V +P +C PCQ+ KS RL F ++ RA LD VHCDLWGP+P+ + +G++Y Sbjct: 477 KEIQVNKSRTSP-VCEPCQMGKSTRLQFFSSDFRALKPLDRVHCDLWGPSPVVSNQGFKY 535 Query: 773 YVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRT 594 Y FVDDFSRF+W +PLR KS+F +VFI + V NQ +K+FQSDGG EF + ++ Sbjct: 536 YAVFVDDFSRFSWFFPLRMKSKFISVFIAYQKLVENQLGTKIKEFQSDGGGEFTSNKLKE 595 Query: 593 FMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVIN 414 GIHHRISCPYTPQQNG ERKHRH++E GLSML+H+H P W +AF TA Y+ N Sbjct: 596 HFREHGIHHRISCPYTPQQNGVAERKHRHLVELGLSMLYHSHTPLKFWVEAFFTANYLSN 655 Query: 413 RLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSA 234 LPS +L SP+E LF + Y + FG +P LR A +K PRS C+FLGY + Sbjct: 656 LLPSSVLKEISPYETLFQQKVDYTPLRVFGTACYPCLRPLAKNKFDPRSLQCVFLGYHNQ 715 Query: 233 YKGFRCYDPATSRTYITRNAQFDEHCFPF 147 YKG+RC P T + YI+R+ FDE FPF Sbjct: 716 YKGYRCLYPPTGKVYISRHVIFDEAQFPF 744 >emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1| putative protein [Arabidopsis thaliana] Length = 1415 Score = 455 bits (1171), Expect = e-125 Identities = 271/755 (35%), Positives = 394/755 (52%), Gaps = 12/755 (1%) Frame = -2 Query: 2372 MAGTSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTI 2193 MA S ++ L + H V++KLS++NYLLWK QF L + +LLGFV G+ P P T Sbjct: 1 MADNSDSSSALCFS---HYVTLKLSTANYLLWKIQFETWLNNQRLLGFVTGANPCPNATR 57 Query: 2192 TSASGETIS---NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFA 2022 + +G+ ++ NP+++ W DQ+++G L +LSE+A+ V +SR W +L + Sbjct: 58 SIRNGDQVTEATNPDFLTWVQNDQKIMGWLLGSLSEDALRSVYGLHTSREVWFSLAKKYN 117 Query: 2021 HSSVSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGA 1842 S SR S+ EY + K +CDQL ++G PV E++K L GLG Sbjct: 118 RVSASRKSDLQRRLNPVSKNEKSMLEYLNCVKQICDQLDSIGCPVPENEKIFGVLNGLGQ 177 Query: 1841 SFANFADT-RMAMTPIP-SFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXX 1668 + + + +M P SF ++ + I FD + Sbjct: 178 EYMLVSTMIKGSMDTYPMSFEDVVFKLINFDDKLQ------------------------- 212 Query: 1667 XXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLY 1491 NGQS +P CQIC K H A KC Sbjct: 213 ------NGQSGGNRGRNNYTTKGRGFPQQISSGSPSDSGTRPTCQICNKYGHSAYKCWKR 266 Query: 1490 LGRDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXX 1311 + + + ++AF + S+ W DSGA++H+T+ S L + QPYS Sbjct: 267 FDHAFQSE-DFSKAFAAMRVSDQKSNPWVTDSGATSHITNSTSQLQSAQPYSGEDSVIVG 325 Query: 1310 XXNALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLI 1140 + L + + L DVLV P+ITK+LLS+SKLT+DYP + F ++ Sbjct: 326 NSDFLPITHIGSAVLTSNQGNLPLRDVLVCPNITKSLLSVSKLTSDYPCVIEFDSDGVIV 385 Query: 1139 QNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLL- 963 +++ TKQ + +G LY+L+ P +A SS + S E+WH+RLGH ++ L Sbjct: 386 KDKLTKQLLTKGTRHNDLYLLEN--PKFMACYSSRQQATSDEVWHMRLGHPNQDVLQQLL 443 Query: 962 -NKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAE 786 NK +S TS LC CQ+ K +L F ++ + +L+ VHCDLWGPAP+ +++ Sbjct: 444 RNKAIVISKTS----HSLCDACQMGKICKLPFASSDFVSSRLLERVHCDLWGPAPVVSSQ 499 Query: 785 GYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNT 606 G+RYYV F+D++SRFTW YPLR KS+FF+VF+ F V NQ + FQ DGG EF + Sbjct: 500 GFRYYVIFIDNYSRFTWFYPLRLKSDFFSVFLTFQKMVENQCQQKIASFQCDGGGEFISN 559 Query: 605 HVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAV 426 + + GI ISCPYTPQQNG ERKHRHI E G SM+F P LW +AF T+ Sbjct: 560 QFVSHLAECGIRQLISCPYTPQQNGIAERKHRHITELGSSMMFQGKVPQFLWVEAFYTSN 619 Query: 425 YVINRLPSPIL-DNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFL 249 ++ N LPS +L D KSP+E+L G+ P Y + + FGC +P LR A +K P+S C+F Sbjct: 620 FLCNLLPSSVLKDQKSPYEVLMGKAPVYTSLRVFGCACYPNLRPYASNKFDPKSLLCVFT 679 Query: 248 GYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPFA 144 GY+ YKG++C+ P T + YI R+ FDE F F+ Sbjct: 680 GYNEKYKGYKCFHPPTGKIYINRHVLFDESKFLFS 714 >gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana] Length = 1392 Score = 446 bits (1147), Expect = e-122 Identities = 267/744 (35%), Positives = 386/744 (51%), Gaps = 19/744 (2%) Frame = -2 Query: 2318 MVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSASGETIS---NPEYVK 2148 +V++KL+ +NYLLWK QF L+S LLGFV G+ P P TI + S N E++K Sbjct: 15 VVTLKLTPTNYLLWKTQFESYLSSHLLLGFVTGATPRPASTIIVTKDDIQSEEANQEFLK 74 Query: 2147 WFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTHQXXXXXXXXX 1968 W DQ + +F +LSEEA+ V+ S++ W L F S +R + Sbjct: 75 WTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTRKYDLQKRLGTCS 134 Query: 1967 XXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFA---DTRMAMTPI 1797 ++ Y S K +CDQL ++G PV E +K L GLG + + A + + + P Sbjct: 135 KAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKIFGVLNGLGKEYESIATVIEHSLDVYPG 194 Query: 1796 PSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAF----TXXXXXXXXXXXXXXXSFNGQSPH 1632 P F ++++ FD +P +AF + +F G+ + Sbjct: 195 PCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFYTDKSYSSRGNNNSRGGRYGNFRGRGSY 254 Query: 1631 TPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRDYSNPANLA 1455 + KP CQIC K H A KC +Y P +L Sbjct: 255 SSRGRGFHQQFGSGSNNGSGNGS-----KPTCQICRKYGHSAFKCYTRFEENYL-PEDLP 308 Query: 1454 EAFTS---SCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXXX 1284 AF + S S +W DS A+AH+T+ L N Q YS + L Sbjct: 309 NAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITH 368 Query: 1283 XXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTI 1113 + L DVLV P ITK+LLS+SKLT+DYP F + +I+++ T+Q + Sbjct: 369 IGTIPLNISQGTLPLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQQLL 428 Query: 1112 AQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTS 933 QG+ +GLYVL + P S+ + + E+WH RLGH ++ L K + V Sbjct: 429 TQGNKHKGLYVL-KDVP-FQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNK 486 Query: 932 VLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDD 753 + +C CQ+ K RL F +E + L+ +HCDLWGPAP+T+A+G++YYV F+D+ Sbjct: 487 T--SSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDN 544 Query: 752 FSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGI 573 +SRFTW YPL+ KS+FF+VF+ F V NQ+ + FQ DGG EF + + + GI Sbjct: 545 YSRFTWFYPLKLKSDFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFVAHLASCGI 604 Query: 572 HHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPIL 393 ISCP+TPQQNG ER+HR++ E GLS++FH+ P LW +AF T+ ++ N LPS L Sbjct: 605 KQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLSNLLPSSTL 664 Query: 392 -DNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRC 216 DNKSP+E+L G P Y + FG +PYLR A +K P+S C+FLGY++ YKG+RC Sbjct: 665 SDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYAKNKFDPKSLLCVFLGYNNKYKGYRC 724 Query: 215 YDPATSRTYITRNAQFDEHCFPFA 144 P T + YI R+ FDE FP++ Sbjct: 725 LHPPTGKVYICRHVLFDERKFPYS 748 >gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis] Length = 2301 Score = 446 bits (1147), Expect = e-122 Identities = 268/749 (35%), Positives = 375/749 (50%), Gaps = 15/749 (2%) Frame = -2 Query: 2345 TLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSAS--GET 2172 T P + + V++KL+ NY+LWKRQF L +LLGFV GS P P TI + + G T Sbjct: 10 TPPALKLTNAVTVKLTEKNYILWKRQFEAFLNGQRLLGFVTGSTPQPAATIPAPTINGTT 69 Query: 2171 IS--NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTH 1998 NP+Y WF TDQ + L + SE+ + V+ CT+S W L S F + +R Sbjct: 70 TPAPNPDYALWFQTDQAIQSWLLGSFSEDVQSSVIHCTNSYEIWMTLASHFNRPTSARLF 129 Query: 1997 QXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADT 1818 + S+ +Y K +CDQL+++G+PVDE K L GLG + + Sbjct: 130 ELQRKLQTTAKQDKSMDDYLRDIKTICDQLTSIGQPVDERMKIFAALLGLGKEYEPIKTS 189 Query: 1817 ---RMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXXXXSF 1650 M PSF ++ + + F+ K+ + SP +AF Sbjct: 190 IEGSMDTQYHPSFEDVVPRLVAFEDRLKSYTTDTAVSPHLAFNTVRGRPFFTRNRGRN-- 247 Query: 1649 NGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRDYS 1473 G +P CQIC K H A +C Y Sbjct: 248 RGGRSFFSTRGRGFPQHLSSSSSSRSSVSADSEARPVCQICGKSGHEAMRCWHRFDNSYQ 307 Query: 1472 --NPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNA 1299 N A S + +WF D+GASAH+T+ L N QPY Sbjct: 308 LDEMHNALAAMRVSDMIDSRGGEWFPDTGASAHITNTPHHLQNAQPYMGSDSVMVGNGEY 367 Query: 1298 LXXXXXXXXXXXH---DVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRA 1128 L ++ L DVLV P I K LLS+SK T DYP F I ++A Sbjct: 368 LPITHTGAASIASSSGNLILNDVLVCPQIAKPLLSVSKFTTDYPCGFDFDADNVCIYDKA 427 Query: 1127 TKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGH 948 TK+ + QG +GLY + PA A S+ + AS E+WH RLGH HI+ L + Sbjct: 428 TKKVLLQGRNTKGLYSIKE--PAFHAFFSTRQVAASDEVWHQRLGHPNPHILQRLASIKS 485 Query: 947 LSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYV 768 + + + LC CQ+AKS RL F+ ++ A L+ +HCD+WGP+P+ + + ++YYV Sbjct: 486 VFINK--RSKSLCVSCQMAKSSRLPFSASQFVATRPLERIHCDVWGPSPVVSVQEFKYYV 543 Query: 767 AFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFM 588 +D++SR+ W+YP++ KS+F ++FI F + V NQF ++ FQ DGG EF + + Sbjct: 544 VLIDNYSRYCWMYPMKKKSDFHSIFIAFQSLVQNQFHTTIGTFQCDGGGEFISNQFLLHL 603 Query: 587 ETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRL 408 + GI +SCP+TPQQNG ER+HRHI+E GLS+LF + AP W +AF TA ++ N L Sbjct: 604 QKNGIQQLLSCPHTPQQNGLAERRHRHIVELGLSLLFQSRAPQKYWVEAFMTANFLSNLL 663 Query: 407 P-SPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAY 231 P S + SP+E L + P Y + FGC FP LR +KL PRS C+FLGYS Y Sbjct: 664 PHSANTNTASPYEKLHNKSPSYDALRIFGCACFPMLRPYTQNKLDPRSLQCVFLGYSEKY 723 Query: 230 KGFRCYDPATSRTYITRNAQFDEHCFPFA 144 KG+RC PAT R YI+R+ FDE FPFA Sbjct: 724 KGYRCLLPATGRVYISRHVIFDESKFPFA 752 >gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1149 Score = 443 bits (1139), Expect = e-121 Identities = 269/765 (35%), Positives = 392/765 (51%), Gaps = 19/765 (2%) Frame = -2 Query: 2345 TLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSASG---- 2178 TLP + + V++KL+ NY+LWK QF L+ LLGFVNG+ P T++ Sbjct: 9 TLPSLNISNCVTVKLTDRNYILWKSQFESFLSGQGLLGFVNGAYAAPTGTVSGPQDAGVT 68 Query: 2177 ETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTH 1998 E I NP+Y WF +DQ ++ SE+ ++ VV +S W L F S SR Sbjct: 69 EAIPNPDYQAWFRSDQVVM-------SEDILSVVVGSKTSHEVWMNLAKHFNRISSSRIF 121 Query: 1997 QXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADT 1818 + +++EY K +CDQL++VG PV E K + GL + + Sbjct: 122 ELQRRLHSLSKEGKTMEEYLRYLKTICDQLASVGSPVAEKMKIFAMVHGLTREYEPLITS 181 Query: 1817 ---RMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFN 1647 + P PS+ ++++ FD + TD + +AF Sbjct: 182 LEGTLDAFPGPSYEDVVYRLKNFDDRLQGYTVTDVSPHLAFNTFRSSNRG---------R 232 Query: 1646 GQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRDYSN 1470 G + KP CQIC K HYA +C Y + Sbjct: 233 GGRNNRGKGNFSTRGRGFQQQFSSSSSSVSASEKPMCQICGKRGHYALQCWHRFDDSYQH 292 Query: 1469 PANLAEAFTSSCNVSGPSSD--WFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNAL 1296 A AF S+ +++ S D W DS A+AH+T++ S L +QPY N L Sbjct: 293 SEAAAAAF-SALHITDVSDDSGWVPDSAATAHITNNSSRLQQMQPYLGNDTVMASDGNFL 351 Query: 1295 XXXXXXXXXXXH---DVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRAT 1125 ++ L DVLV P+I K+LLS+SKLT DYP F L++++AT Sbjct: 352 PITHIGSANLPSTSGNLPLKDVLVCPNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKAT 411 Query: 1124 KQTIAQGH-LDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKLGH 948 + + +G GLY L+ P S+ + KA+ E+WH+RLGH ++ LL Sbjct: 412 CKVLTKGSSTSEGLYKLEN--PKFQMFYSTRQVKATDEVWHMRLGHPNPQVLQLLANKKA 469 Query: 947 LSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYV 768 + + T K+C C+L KS RL F ++ A L+ VHCDLWGPAP+++ +G++YYV Sbjct: 470 IQINK--STSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQYYV 527 Query: 767 AFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFM 588 F+D+ SRF W YPL+ KS+F ++F+KF +FV N + FQSDGG EF + + Sbjct: 528 IFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVENLLQTKIGTFQSDGGGEFTSNRFLQHL 587 Query: 587 ETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRL 408 + GI H ISCP+TPQQNG ERKHR + E GL+++F + AP W +AF TA ++ N L Sbjct: 588 QESGIQHYISCPHTPQQNGLAERKHRQLTERGLTLMFQSKAPQRFWVEAFFTANFLSNLL 647 Query: 407 PSPILDNK-SPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAY 231 P+ LD+ +P+++LFG+ P Y + FGC FP LR A +K PRS CIFLGY+ Y Sbjct: 648 PTSALDSSTTPYQVLFGKAPDYSALRTFGCACFPTLRAYARNKFDPRSLKCIFLGYTEKY 707 Query: 230 KGFRCYDPATSRTYITRNAQFDEHCFPFATSGVT----TPSPKLD 108 KG+RC+ P T+R Y++R+ FDE FPF + + +P+P D Sbjct: 708 KGYRCFFPPTNRVYLSRHVLFDESSFPFIDTYTSLQHPSPTPMFD 752 >gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1402 Score = 435 bits (1118), Expect = e-119 Identities = 272/755 (36%), Positives = 371/755 (49%), Gaps = 21/755 (2%) Frame = -2 Query: 2345 TLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLT--ITSASGET 2172 ++P + + V++ L++ NY+LWK QF L LLGFV GS P P T ++ G T Sbjct: 5 SVPSLNISNCVTVTLTAKNYILWKSQFESFLDGQGLLGFVTGSIPAPSQTSVVSDIDGST 64 Query: 2171 IS--NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTH 1998 + NPEY WF TD+ + L + E+ ++ VV+C +S W ++ + F S SR Sbjct: 65 SASPNPEYYTWFKTDRVVKSWLLGSFLEDILSVVVNCNTSHEVWISVANHFNRVSSSRLF 124 Query: 1997 QXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADT 1818 + S+ EY K +CDQL++VG PV E K L GLG + T Sbjct: 125 ELQRRLQNVSKRDKSMDEYLKDLKTICDQLASVGSPVTEKMKIFAALNGLGREYEPIKTT 184 Query: 1817 ---RMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAFTXXXXXXXXXXXXXXXSF 1650 M P PS ++ + +D + + SP +AF Sbjct: 185 IENSMDALPGPSLEDVIPKLTGYDDRLQGYLEETAVSPHVAFNITTSDDSNASGYFNAYN 244 Query: 1649 NGQSP----HTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485 G+ CQIC K H A KC Sbjct: 245 RGKGKSNRGRNSFSTRGRGFHQQISSTNSSSGSQSGGTSVVCQICGKMGHPALKCWHRFN 304 Query: 1484 RDYSNP----ANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXX 1317 Y A A T + G ++W DS A+AH+T+ +L QPY Sbjct: 305 NSYQYEELPRALAAMRITDITDQHG--NEWLPDSAATAHVTNSPRSLQQSQPYHGSDAVM 362 Query: 1316 XXXXNALXXXXXXXXXXXH---DVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTF 1146 N L +V L DVLV P ITK+LLS+SKLT DYP V F Sbjct: 363 VADGNFLPITHTGSTNLASSSGNVPLTDVLVCPSITKSLLSVSKLTQDYPCTVEFDSDGV 422 Query: 1145 LIQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISL 966 I ++ATK+ + G GLY L + A S+ + AS E+WH RLGH ++ Sbjct: 423 RINDKATKKLLIMGSTCDGLYCL-KDDSQFKAFFSTRQQSASDEVWHRRLGHPHPQVLQQ 481 Query: 965 LNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAE 786 L K +S+ + LC CQL KS RL F + ++ L+ VHCDLWGP+PIT+ + Sbjct: 482 LVKTNSISINKT--SKSLCEACQLGKSTRLPFVSSSFTSNRPLERVHCDLWGPSPITSVQ 539 Query: 785 GYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNT 606 G+RYY F+D +SRF+WIYPL+ KS+F+N+F+ FH V NQ + + FQ DGG EF N Sbjct: 540 GFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKLVENQLNHKISVFQCDGGGEFVNH 599 Query: 605 HVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAV 426 ++ GI IS P+TPQQNG ERKHRH++E GLSMLF + P W +AF TA Sbjct: 600 KFLQHLQNHGIQQHISYPHTPQQNGLAERKHRHLVELGLSMLFQSKVPLKFWVEAFFTAN 659 Query: 425 YVINRLP-SPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFL 249 ++IN LP S + D SP+E L P Y + FGC FP +RD A +K PRS C+FL Sbjct: 660 FLINLLPTSAVEDAISPYEKLHQTTPDYTALRSFGCACFPTMRDYAMNKFDPRSLKCVFL 719 Query: 248 GYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPFA 144 GY+ YKG+RC P T R YI+R+ FDE +PF+ Sbjct: 720 GYNDKYKGYRCLYPPTGRVYISRHVIFDETAYPFS 754 >emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana] gi|7267767|emb|CAB81170.1| retrotransposon like protein [Arabidopsis thaliana] Length = 1515 Score = 419 bits (1077), Expect = e-114 Identities = 261/752 (34%), Positives = 378/752 (50%), Gaps = 29/752 (3%) Frame = -2 Query: 2312 SIKLSSSNYLLWK----RQFIPML------TSFQLLGFVNGSEPVPPLTITSASGETIS- 2166 + L S YLL K + P++ TS GFV G+ P P TI + S Sbjct: 4 TFNLVSEEYLLAKIVRPSRVAPLISSQSEETSLYSNGFVTGATPRPASTIIVTKDDIQSE 63 Query: 2165 --NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTHQX 1992 N E++KW DQ + +F +LSEEA+ V+ S++ W L F S +R + Sbjct: 64 EANQEFLKWTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTRKYDL 123 Query: 1991 XXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFA---D 1821 ++ Y S K +CDQL ++G PV E +K L GLG + + A + Sbjct: 124 QKRLGTCSKAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKIFGVLNGLGKEYESIATVIE 183 Query: 1820 TRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSP-MAF----TXXXXXXXXXXXXXXX 1656 + + P P F ++++ FD +P +AF + Sbjct: 184 HSLDVYPGPCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFYTDKSYSSRGNNNSRGGRYG 243 Query: 1655 SFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRD 1479 +F G+ ++ KP CQIC K H A KC + Sbjct: 244 NFRGRGSYSSRGRGFHQQFGSGSNNGSGNGS-----KPTCQICRKYGHSAFKCYTRFEEN 298 Query: 1478 YSNPANLAEAFTS---SCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXX 1308 Y P +L AF + S S +W DS A+AH+T+ L N Q YS Sbjct: 299 YL-PEDLPNAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGN 357 Query: 1307 XNALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQ 1137 + L + L DVLV P ITK+LLS+SKLT+DYP F + +I+ Sbjct: 358 GDFLPITHIGTIPLNISQGTLPLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIK 417 Query: 1136 NRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNK 957 ++ T+Q + QG+ +GLYVL + P S+ + + E+WH RLGH ++ L K Sbjct: 418 DKRTQQLLTQGNKHKGLYVL-KDVP-FQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIK 475 Query: 956 LGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYR 777 + V + +C CQ+ K RL F +E + L+ +HCDLWGPAP+T+A+G++ Sbjct: 476 TKAIVVNKT--SSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQ 533 Query: 776 YYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVR 597 YYV F+D++SRFTW YPL+ KS+FF+VF+ F V NQ+ + FQ DGG EF + Sbjct: 534 YYVIFIDNYSRFTWFYPLKLKSDFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFV 593 Query: 596 TFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVI 417 + + GI ISCP+TPQQNG ER+HR++ E GLS++FH+ P LW +AF T+ ++ Sbjct: 594 AHLASCGIKQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLS 653 Query: 416 NRLPSPIL-DNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYS 240 N LPS L DNKSP+E+L G P Y + FG +PYLR A +K P+S C+FLGY+ Sbjct: 654 NLLPSSTLSDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYAKNKFDPKSLLCVFLGYN 713 Query: 239 SAYKGFRCYDPATSRTYITRNAQFDEHCFPFA 144 + YKG+RC P T + YI R+ FDE FP++ Sbjct: 714 NKYKGYRCLHPPTGKVYICRHVLFDERKFPYS 745 >emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] Length = 1171 Score = 404 bits (1039), Expect = e-110 Identities = 262/772 (33%), Positives = 376/772 (48%), Gaps = 22/772 (2%) Frame = -2 Query: 2372 MAGTSSTA---DTLPIATMIHMVSIKLSSS-NYLLWKRQFIPMLTSFQLLGFVNGSEPVP 2205 MA T+ T+ LP +T I +S+KL S NYL WK QF+ +L L+GF++G+E P Sbjct: 1 MANTNDTSIPVSILPPSTTI--ISVKLDGSHNYLAWKMQFLNLLRGHDLMGFIDGTEACP 58 Query: 2204 PLTITSASGETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAF 2025 P S S NP YV W D LLG + ++LSE+ ++ + +S+ WTAL++ F Sbjct: 59 PKHTASGS----LNPAYVVWQKKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRF 114 Query: 2024 AHSSVSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLG 1845 + S SR S EY K L DQL+A GKPVD+ D + L GL Sbjct: 115 SSQSRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVDDQDLISFLLGGLQ 174 Query: 1844 ASFANFADTRMAMTPIPSFTTLLHQA--IQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXX 1671 +S+ F + + FT QA + ++ + +T F Sbjct: 175 SSYTPFVTSFNFASRETDFTFEDFQAELLGYENLLDVNHSVHNTDGPHFAFAANKSKAPT 234 Query: 1670 XXXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPL 1494 P P +P CQIC K H A C Sbjct: 235 YVQKKG----PPLPPTKMQNAASSNYRSQQTRSTPSQLPNNRPVCQICGKSGHTAIDCFH 290 Query: 1493 YLGRDYSN---PANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPY---SX 1332 Y P +LA A + N + W++DSGA+AH+TSD + L + QP+ Sbjct: 291 RFDYSYQGRFPPQDLA-AMVAETNATFDHQVWYMDSGANAHITSDATNLTHQQPFCESET 349 Query: 1331 XXXXXXXXXNALXXXXXXXXXXXHDVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDH 1152 L + L +L P NL+SI++ D + + + Sbjct: 350 VTVGNGSGLQVLNTGSTTFNFGQSNFHLNKILHCPQAATNLISINQFCLDNNCYFILTAN 409 Query: 1151 TFLIQNRATKQTIAQGHLDRGLYVL---DRGTPALLAAVSSSRSKASFELWHLRLGHVPF 981 F+++ T + + QG ++ GLY L +L ++ +A+ + WH RLGH Sbjct: 410 GFVVKENLTGRILLQGVVENGLYPLAGCKTFHKSLTCLSTTIGVRANADTWHSRLGHPSS 469 Query: 980 HIISLLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAP 801 I + L LSV + CS CQL K+K+L F + +++ L L+H D+W +P Sbjct: 470 VIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSVPLALIHSDVW-VSP 528 Query: 800 ITTAEGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGS 621 + + G YYV F+DD+SR++W+YPL KS+ F F+KF FS S+KQ Q+D G Sbjct: 529 VQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFATFVKFKTIAEKLFSTSIKQIQTDNGG 588 Query: 620 EFRNTHVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDA 441 EF + + F+ +GI HR++CP+T QQNG VERKHRHI E GL++L + W DA Sbjct: 589 EFTSNQFKQFLTAQGIFHRLTCPHTSQQNGIVERKHRHIQEMGLTLLAQSSLSPQYWVDA 648 Query: 440 FATAVYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSP 261 F T+V++INRLP+ +LDN +P+ LL P Y + + FGC +P LR HKL RS Sbjct: 649 FLTSVFLINRLPTKVLDNLTPYFLLHKTEPTYMDLRVFGCACYPLLRPYNDHKLTFRSKK 708 Query: 260 CIFLGYSSAYKGFRCYDPATSRTYITRNAQFDEHCFP------FATSGVTTP 123 CIFLGYS+ KG+RC D AT R YI+R+ FDEH FP + TS T P Sbjct: 709 CIFLGYSNCQKGYRCLDLATKRVYISRHVIFDEHSFPAKELAEYTTSRRTNP 760 >pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retrotransposon Hopscotch polyprotein [Zea mays] Length = 1439 Score = 399 bits (1025), Expect = e-108 Identities = 255/756 (33%), Positives = 369/756 (48%), Gaps = 12/756 (1%) Frame = -2 Query: 2372 MAGTSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTI 2193 MA SS + + + VS KL+ NYLLWK Q +P + + QL + G E PP TI Sbjct: 1 MAMQSSLSTSAIPTSFAIPVSEKLTKGNYLLWKAQVLPAIRAAQLDDILTGVEICPPKTI 60 Query: 2192 TSASGETIS--NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAH 2019 + AS T++ NP Y +W + DQ +LG L S+LS E ++ VV+C++S + WT L ++ Sbjct: 61 SDASDRTVTVANPAYGRWIARDQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSS 120 Query: 2018 SSVSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGAS 1839 S +R SV EY ++ + D+L A GKP+D+ + + L GL Sbjct: 121 HSRARKVNTRIALATTKKGASSVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDED 180 Query: 1838 FANFADTRMA----MTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXX 1671 F +A +TP +T LL + L T + S+ A Sbjct: 181 FNPLVTAVVARSDPITPGDLYTQLLSYENRMHLQTGSSSLMQSS---ANARSPGRGMSWG 237 Query: 1670 XXXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPL 1494 F+ +PRCQ+C + H A C Sbjct: 238 RSGGRGFSRGRGRGRGPSRGGFQSFGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWY 297 Query: 1493 YLGRDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXX 1314 +Y A S+ + +G + W+ D+GA+ H+T DL L Y+ Sbjct: 298 RFDENYVPDQRSAN---SAAHQNGSNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIA 354 Query: 1313 XXXNALXXXXXXXXXXXHD---VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFL 1143 + + L VL VP KNL+S+ +LTND V + F FL Sbjct: 355 ANGTGMTISNIGNAIVPTSSRSLHLRSVLHVPSTHKNLISVHRLTNDNDVFIEFHSSHFL 414 Query: 1142 IQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLL 963 I++R TK + G GLY L P L + S ++ E WH RLGH I+ + Sbjct: 415 IKDRQTKAVLLHGKCRDGLYPLPPH-PDLRLKHNFSSTRVPLEHWHKRLGHPSRDIVHRV 473 Query: 962 NKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEG 783 +L S T +C C AK+ +L +T++ ++ + L L+ D++GPA I + Sbjct: 474 ISNNNLPCLSNNSTTSVCDACLQAKAHQLPYTISMSQSSAPLMLIFSDVFGPA-IDSFGR 532 Query: 782 YRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFR--N 609 Y+YYV+F+DD+S+FTWIY LR KS+ + F +F V F + FQSD G E+ N Sbjct: 533 YKYYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLN 592 Query: 608 THVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATA 429 H +T GIHH++SCP+T QQNG ERKHRHI+E GL++L + P W AF A Sbjct: 593 AHFKTI----GIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAA 648 Query: 428 VYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFL 249 VY+INR PS + + +P L G P Y + + FGC +P LR HKL RS+ C+FL Sbjct: 649 VYLINRTPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFL 708 Query: 248 GYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPFAT 141 GYS+ +KGF+C D +T R YI+R+ FDEH FPFA+ Sbjct: 709 GYSNMHKGFKCLDISTGRIYISRDVVFDEHVFPFAS 744 >emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] Length = 1334 Score = 398 bits (1022), Expect = e-108 Identities = 256/773 (33%), Positives = 384/773 (49%), Gaps = 22/773 (2%) Frame = -2 Query: 2363 TSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSA 2184 +SS +++ + ++ H + IKL SNY+LWK Q ++ + ++ G++ PP + + Sbjct: 14 SSSNHNSVSLLSLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPTG 73 Query: 2183 SGETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSR 2004 NP++V+W D+ +L ++STL+ + M ++V +S AW AL F+ SS +R Sbjct: 74 D----LNPDFVQWRRFDRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKAR 129 Query: 2003 THQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFA 1824 Q ++ +Y + K + D L+AVG+PV E D L GLG + + Sbjct: 130 IMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIV 189 Query: 1823 DTRMAMTPIPSFTTLLHQAIQFD--LMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSF 1650 + A S ++ + + L + PTD + A + Sbjct: 190 ASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDPSFASAHMASXPSRQPNRPHQPRHY 249 Query: 1649 N----------GQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADK 1503 + S P +P+CQ+C K H A K Sbjct: 250 HHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGHTAIK 309 Query: 1502 CPLYLGRDY--SNPANLAEA-FTSSCNVSGPS--SDWFVDSGASAHMTSDLSTLDNVQPY 1338 C +Y +N LA+A F+ + + P WF D+GA+ H++ TL VQPY Sbjct: 310 CYHRFDINYQGNNGVPLAQAPFSHAMXAAAPDHQDSWFFDTGATHHLSHSAQTLSCVQPY 369 Query: 1337 SXXXXXXXXXXNALXXXXXXXXXXXHDVQ---LLDVLVVPHITKNLLSISKLTNDYPVDV 1167 S N+L + L VL VPH++ NL+S+SK D V Sbjct: 370 SGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLISVSKFCTDNAVFF 429 Query: 1166 LFSDHTFLIQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHV 987 F F ++++ TK+ + +G L GLY +P + S S + +WH RLGH Sbjct: 430 EFHSSCFFVKDQVTKKILLKGWLRDGLYEFSSSSPPRAFVTTGSFSDGA--IWHSRLGHP 487 Query: 986 PFHIISLLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGP 807 I+S + SVT + C C LAKS L ++L+ A L L+H DLWGP Sbjct: 488 AVPILSKALASCNPSVTLQINKIAPCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGP 547 Query: 806 APITTAEGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDG 627 AP T+ G RY++ F+DD+SR TWIY L K + FI F V NQ ++K QSD Sbjct: 548 APSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDN 607 Query: 626 GSEFRNTHVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWF 447 G EF + ++E GI H+ SCP+TPQQNGR ERK RH++ETGL+++ + P+ W Sbjct: 608 GGEF--LAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWT 665 Query: 446 DAFATAVYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRS 267 AF TAVY+IN LP+ +L +SP + LF ++P Y + + FGC FP LR HKL RS Sbjct: 666 YAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRS 725 Query: 266 SPCIFLGYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPF-ATSGVTTPSPKL 111 + C+FLGY+ A+KG+ C D +T+R YI+RN F E FPF ++S ++PSP L Sbjct: 726 TACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQSSSPPSSPSPHL 778 >emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] Length = 1432 Score = 396 bits (1018), Expect = e-107 Identities = 257/788 (32%), Positives = 380/788 (48%), Gaps = 38/788 (4%) Frame = -2 Query: 2369 AGTSSTADTLPIATMI-HMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTI 2193 +G SST ++P M+ H + +KL +NY+LW+ Q ++ + F++G+ P + Sbjct: 17 SGQSSTMASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDL 76 Query: 2192 TSASGETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSS 2013 + + NP +V W D+ +L ++S+L+ M +++ +S +AW ALES F+ SS Sbjct: 77 SPG----VMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSS 132 Query: 2012 VSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASF- 1836 +R Q S+ +Y + K D L+A+G+PV E D+ L GLG+ + Sbjct: 133 RARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYN 192 Query: 1835 -----ANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXX 1671 N D ++++ I S ++ + M ++S Sbjct: 193 AVVTAINIRDDKISLEAIHSMLLAFEHRLEQQSSIEQMSANYASSS-------NNRGGGR 245 Query: 1670 XXXXXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKC-- 1500 G SP+ KP+CQ+C K H A C Sbjct: 246 KFNGGRGQGYSPNN-NNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYH 304 Query: 1499 ---------------PLYLGRDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDL 1365 L G + PA +A A + + S W++DSGAS H+T +L Sbjct: 305 RFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADES-----WYLDSGASHHLTQNL 359 Query: 1364 STLDNVQPYSXXXXXXXXXXNALXXXXXXXXXXXHDV---QLLDVLVVPHITKNLLSISK 1194 L + PY+ L +L V VP I+ NL+S++K Sbjct: 360 GNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVAK 419 Query: 1193 LTNDYPVDVLFSDHTFLIQNRATKQTIAQGHLDRGLY---VLDRGTP-------ALLAAV 1044 ++ + F + F +++ TK +AQG L+ GLY V P + + Sbjct: 420 FCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVFSNLKPYSSINNASAFHSQ 479 Query: 1043 SSSRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTL 864 SS + ELWH RLGH F I+S + + +V S +CS CQLAKS RL L Sbjct: 480 FSSTVENKAELWHNRLGHASFDIVSKV--MNTCNVASGKYKSFVCSDCQLAKSHRLPTQL 537 Query: 863 NEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKF 684 + A L+LV+ D+WGPA I + G RY++ FVDD+SR+TW Y L+ K + +F F Sbjct: 538 SNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKXF 597 Query: 683 HAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHHRISCPYTPQQNGRVERKHRHI 504 + NQF +K QSD G EFR+ +F++ GI HR SCPY QNGRVERKHRH+ Sbjct: 598 KLQMENQFDTKIKCLQSDNGGEFRS--FTSFLQAVGIAHRFSCPYNSXQNGRVERKHRHV 655 Query: 503 IETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFG 324 +ETGL++L HA P W AF T ++INR+PS +L+ SP+ LF R P Y +F+ FG Sbjct: 656 VETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYKSFRVFG 715 Query: 323 CRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPFA 144 C +P++R HKL RS C+FLGYS +KGF C D AT R YIT + FDE FP A Sbjct: 716 CLCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFPLA 775 Query: 143 TSGVTTPS 120 S ++ S Sbjct: 776 QSKSSSSS 783 >emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] Length = 1434 Score = 395 bits (1014), Expect = e-107 Identities = 255/773 (32%), Positives = 383/773 (49%), Gaps = 22/773 (2%) Frame = -2 Query: 2363 TSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSA 2184 +SS +++ + ++ H + IKL SNY+LWK Q ++ + ++ G++ PP + + Sbjct: 14 SSSNHNSVSLLSLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPTG 73 Query: 2183 SGETISNPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSR 2004 NP++V+W D+ +L ++STL+ + M ++V +S AW AL F+ SS +R Sbjct: 74 D----LNPDFVQWRRFDRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKAR 129 Query: 2003 THQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFA 1824 Q ++ +Y + K + D L+AVG+PV E D L GLG + + Sbjct: 130 IMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIV 189 Query: 1823 DTRMAMTPIPSFTT-----LLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXX 1659 + A S + L H+ + DP+ +++ MA Sbjct: 190 ASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDPSFASAHMASVPSRQPNRPHQPRHY 249 Query: 1658 XS-------FNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADK 1503 + S P +P+CQ+C K H A K Sbjct: 250 HHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGHTAIK 309 Query: 1502 CPLYLGRDY--SNPANLAEA-FTSSCNVSGPS--SDWFVDSGASAHMTSDLSTLDNVQPY 1338 C +Y +N LA+A F+ + + P WF D+GA+ H++ TL VQPY Sbjct: 310 CYHRFDINYQGNNGVPLAQAPFSHAMLAAAPDHQDSWFFDTGATHHLSHSAQTLSCVQPY 369 Query: 1337 SXXXXXXXXXXNALXXXXXXXXXXXHDVQ---LLDVLVVPHITKNLLSISKLTNDYPVDV 1167 S N+L + L VL VPH++ NL+S+SK D V Sbjct: 370 SGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLISVSKFXTDNAVFF 429 Query: 1166 LFSDHTFLIQNRATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHV 987 F ++++ TK+ + +G L GLY +P + S S + +WH RLGH Sbjct: 430 EXHSSCFFVKDQVTKKILLKGWLRDGLYEFSSSSPPRAFVTTGSFSDGA--IWHSRLGHP 487 Query: 986 PFHIISLLNKLGHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGP 807 I+S + SVT + C C LAKS L ++L+ A L L+H DLWGP Sbjct: 488 AVPILSKALASCNPSVTLQINKIAPCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGP 547 Query: 806 APITTAEGYRYYVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDG 627 AP T+ G RY++ F+DD+SR TWIY L K + FI F V NQ ++K QSD Sbjct: 548 APSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDN 607 Query: 626 GSEFRNTHVRTFMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWF 447 G EF + ++E GI H+ SCP+TPQQNGR ERK RH++ETGL+++ + P+ W Sbjct: 608 GGEF--LAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWT 665 Query: 446 DAFATAVYVINRLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRS 267 AF TAVY+IN LP+ +L +SP + LF ++P Y + + FGC FP LR HKL RS Sbjct: 666 YAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRS 725 Query: 266 SPCIFLGYSSAYKGFRCYDPATSRTYITRNAQFDEHCFPF-ATSGVTTPSPKL 111 + C+FLGY+ A+KG+ C D +T+R YI+RN F E FPF ++S ++PSP L Sbjct: 726 TACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQSSSPPSSPSPHL 778 >gb|ACY72569.1| unknown [Oryza sativa Japonica Group] Length = 1436 Score = 389 bits (1000), Expect = e-105 Identities = 234/751 (31%), Positives = 363/751 (48%), Gaps = 7/751 (0%) Frame = -2 Query: 2372 MAGTSSTADTLPIATMIHMVSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTI 2193 MA +SS+ + H VS KL N+ LWK Q + +L G + G+ P + Sbjct: 1 MASSSSSGTAAVNLSQGHSVSEKLGKGNHALWKAQVSAAVRGARLQGHLTGAVKAPDAEL 60 Query: 2192 T-SASGETIS--NPEYVKWFSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFA 2022 + + G+T + NP + W + DQ +LG L S+LS + + +V C ++ AW A+E ++ Sbjct: 61 SVTIDGKTTTKPNPAFEDWDANDQLVLGYLLSSLSRDVLIQVATCKTAAEAWRAIEGLYS 120 Query: 2021 HSSVSRTHQXXXXXXXXXXXXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGA 1842 + +R + EY ++ +AL D+++A G+P+DE D + + GL Sbjct: 121 TGTRARAVNTRLALTNTKKGTMKIAEYVAKMRALGDEMAAGGRPLDEEDLVQYIIAGLNE 180 Query: 1841 SFANFADTRMAMTPIPSFTTLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXX 1662 F+ + + L Q + F+ + T S AF Sbjct: 181 DFSPIVSNLCNKSDPITVGELYSQLVNFETLLDLYRST-SQGGAAFVANRGRGGGGGGRG 239 Query: 1661 XXSFNGQSPHTPXXXXXXXXXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLG 1485 + G S + R+P CQ+C K H A C Sbjct: 240 GNNNGGHSSNGSGGRGAPRGRSGGQARGRGRGLGGQDRRPTCQVCFKRGHTAADCWYRFD 299 Query: 1484 RDYSNPANLAEAFTSSCNVSGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXX 1305 DY LA A T+S + ++W++D+GA+ H+T +L L + Y+ Sbjct: 300 EDYVADEKLAAAATNSYGID---TNWYIDTGATDHITGELEKLTTKEKYNGNEQIHTASG 356 Query: 1304 NALXXXXXXXXXXXH---DVQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQN 1134 + ++ L +VL VP K+L+S S+L D + F I++ Sbjct: 357 AGMDISHIGHTTVHTPSRNIHLNNVLYVPQAKKSLISASQLATDNSAFLELHSKFFSIKD 416 Query: 1133 RATKQTIAQGHLDRGLYVLDRGTPALLAAVSSSRSKASFELWHLRLGHVPFHIISLLNKL 954 + TK + +G GLY + + + + +K S WH RLGH I+ + Sbjct: 417 QVTKDILLEGRCRHGLYPIPKSFGRTTSKQALGTTKLSLSRWHSRLGHPSLPIVKQVISK 476 Query: 953 GHLSVTSVLPTPKLCSPCQLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRY 774 +L + +C+ CQ AKS++L + + + L+LV D+WGPAP + +Y Sbjct: 477 NNLPCSVESVNQSVCNACQEAKSRQLPYVRSTSVSQFPLELVFSDVWGPAPESVGRN-KY 535 Query: 773 YVAFVDDFSRFTWIYPLRAKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRT 594 YV+F+DDFS+FTWIY L+ KSE F F +F A V F + Q+D G E++ + + Sbjct: 536 YVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQK--LNS 593 Query: 593 FMETKGIHHRISCPYTPQQNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVIN 414 F GI H +SCP+T QQNG ERKHRHIIE GLS+L +A P W +AF A Y+IN Sbjct: 594 FFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLIN 653 Query: 413 RLPSPILDNKSPFELLFGRVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSA 234 R+PS + N +P E LF + P Y + + FGC +P+LR HKL RS C+FLG+S+ Sbjct: 654 RVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTH 713 Query: 233 YKGFRCYDPATSRTYITRNAQFDEHCFPFAT 141 +KGF+C D ++ R YI+R+ FDE+ FPF+T Sbjct: 714 HKGFKCLDVSSGRVYISRDVVFDENIFPFST 744 >gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group] gi|108708884|gb|ABF96679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1437 Score = 382 bits (980), Expect = e-103 Identities = 233/731 (31%), Positives = 352/731 (48%), Gaps = 8/731 (1%) Frame = -2 Query: 2315 VSIKLSSSNYLLWKRQFIPMLTSFQLLGFVNGSEPVPPLTITSASGE---TISNPEYVKW 2145 VS KL SN+ +WK Q + + +L G + G + P + GE +SNPEY +W Sbjct: 18 VSEKLGKSNHAVWKAQILATIRGARLEGHLTGDDQPPAPILRRKEGEKEVVVSNPEYEEW 77 Query: 2144 FSTDQRLLGVLFSTLSEEAMTEVVDCTSSRAAWTALESAFAHSSVSRTHQXXXXXXXXXX 1965 +TDQ++L L S+++++ + +V C ++ +AW+ ++ F + +RT Sbjct: 78 VATDQQVLAYLLSSMTKDLLVQVATCRTAASAWSMIQGMFGSMTRARTINTRLSLSTLQK 137 Query: 1964 XXXSVKEYGSRFKALCDQLSAVGKPVDESDKSHWFLRGLGASFANFADTRMAMTPIPSFT 1785 ++ Y + +AL D L AVGKPVD+ + + GL F T + + Sbjct: 138 GDMNITTYVGKMRALADDLMAVGKPVDDDELIGYIFAGLDDEFEPVISTIVGRPDPVTIG 197 Query: 1784 TLLHQAIQFDLMTKAMDPTDSTSPMAFTXXXXXXXXXXXXXXXSFNGQSPHTPXXXXXXX 1605 Q I F+ D +S + + N + P Sbjct: 198 ETYAQLISFEQRLAHRRSGDQSSVNSASRSRGQPQRGGSRSGGDSN-RGRGAPSNGANRG 256 Query: 1604 XXXXXXXXXXXXXXXXXXRKPRCQIC-KGEHYADKCPLYLGRDYSNPANLAEAFTSSCNV 1428 +P+CQ+C K H C ++ E F + Sbjct: 257 RGRGNPSGGRANVGGGTDNRPKCQLCYKRGHTVCDCWYRYDENFVPD----ERFAGTAVS 312 Query: 1427 SGPSSDWFVDSGASAHMTSDLSTLDNVQPYSXXXXXXXXXXNALXXXXXXXXXXXH---D 1257 G ++W++D+GA+ H+T +L L Y + + Sbjct: 313 YGVDTNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTASGAGMEISHIGNSVVKTPSRN 372 Query: 1256 VQLLDVLVVPHITKNLLSISKLTNDYPVDVLFSDHTFLIQNRATKQTIAQGHLDRGLYVL 1077 + L DVL VP KNL+S KLT+D + F I++ A ++T+ +G +GLY L Sbjct: 373 LHLKDVLYVPKANKNLVSAYKLTSDNLAFIELYRKFFFIKDLAMRRTLLRGRCHKGLYAL 432 Query: 1076 DRGTPALLAAVSS-SRSKASFELWHLRLGHVPFHIISLLNKLGHLSVTSVLPTPKLCSPC 900 + +K SFE WH RLGH + ++ + K +L V +C C Sbjct: 433 PSPSSHHHQVKQVYGVTKPSFERWHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVSVCDAC 492 Query: 899 QLAKSKRLSFTLNEKRADSILDLVHCDLWGPAPITTAEGYRYYVAFVDDFSRFTWIYPLR 720 Q AKS +LSF + + L+LV D+WGPAP + +YYV+F+DD+S+FTWIY L+ Sbjct: 493 QKAKSHQLSFPKSTSESKYPLELVFSDVWGPAPQSVGNN-KYYVSFIDDYSKFTWIYLLK 551 Query: 719 AKSEFFNVFIKFHAFVCNQFSVSLKQFQSDGGSEFRNTHVRTFMETKGIHHRISCPYTPQ 540 KSE F+ F +F + V F+ + Q+D G E++ H +F GI H +SCP+T Q Sbjct: 552 YKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLH--SFFNKVGITHHVSCPHTHQ 609 Query: 539 QNGRVERKHRHIIETGLSMLFHAHAPASLWFDAFATAVYVINRLPSPILDNKSPFELLFG 360 QNG ERKHRHI+E GL++L ++ P W +AF +AVY+INR PS +L + SP E L G Sbjct: 610 QNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLG 669 Query: 359 RVPYYPNFKPFGCRVFPYLRDSAPHKLAPRSSPCIFLGYSSAYKGFRCYDPATSRTYITR 180 P Y + FGC +P LR HKL RS+ C FLGYS+ +KGF+C DP+T R YI+R Sbjct: 670 HKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISR 729 Query: 179 NAQFDEHCFPF 147 + FDE FPF Sbjct: 730 DVVFDETQFPF 740