BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00021025
         (551 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle...    67   3e-09
ref|NP_861409.1| putative capsid protein [Cestrum yellow leaf cu...    61   2e-07

>ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle virus]
           gi|18266819|sp|P15627.2|CAPSD_SOCMV RecName: Full=Capsid
           protein; Short=CP; AltName: Full=Coat protein
           gi|11322952|emb|CAC16944.1| putative coat protein
           [Soybean chlorotic mottle virus]
          Length = 441

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
 Frame = +2

Query: 128 ERPSKRKYGENWNYPYSQGKIPTDSGYRNVPSQYIPKYQTNMEI--LDIDCNGDMMKSIL 301
           E  +KRK+ +N  +        T   Y+ +P +Y+P +QT   I  LDIDC  +  K I 
Sbjct: 73  ETSNKRKFDKNPEF--------TRFKYQKIPKEYVPAHQTTSTIGVLDIDCVANTEKIIK 124

Query: 302 EWGNRTALVVTTNKEDFEKLSPKEIFNFIAFRTKGIAYQFLVGLDKEV 445
           EW N  ++++T N E+ + LS  + F ++ ++T+GIA+ +L  L  EV
Sbjct: 125 EWFNHHSILITIN-EELKNLSSLDTFYYLVYKTRGIAHAYLSNLPSEV 171


>ref|NP_861409.1| putative capsid protein [Cestrum yellow leaf curling virus]
           gi|81991105|sp|Q7TD09.1|CAPSD_CYLCV RecName: Full=Capsid
           protein; Short=CP; AltName: Full=coat protein
           gi|32305281|gb|AAP78923.1| putative capsid protein
           [Cestrum yellow leaf curling virus]
          Length = 501

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
 Frame = +2

Query: 107 IPETSYQERPSKRKYGENWN------YPYSQGKIPTDSG-YRNVPSQYIPKYQT-NMEIL 262
           IP TS Q+R  +    + WN      Y   +G I  D G Y  +P +Y P +Q  N  IL
Sbjct: 93  IPSTSGQKRTYEFMKDDFWNSGEFDKYAEKRGFIKKDGGGYSKIPKEYKPIHQDENSSIL 152

Query: 263 DIDCNGDMMKSILEWGNRTALVVTTNKEDFEKLSPKEIFNFIAFRTKGIAYQFLVGLDKE 442
           ++DC  +     + W ++  L +  NK  FE  S  EI+N+  + T+G   +FL   D +
Sbjct: 153 NLDCIDNAPALFVSWTSKHGLELQLNKH-FENFSDNEIWNYTQYYTRGSVQKFLSEQDYQ 211

Query: 443 VAPLSTLFLREKDP---FKFLIKGTY 511
                 L L +  P   FK++++  Y
Sbjct: 212 TDVAPNLALVQGGPYAKFKYIVQTIY 237