BLASTX nr result
ID: Mentha29_contig00020668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00020668
(671 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271118.1| PREDICTED: pumilio homolog 23-like [Vitis vi... 216 4e-54
ref|XP_006342891.1| PREDICTED: pumilio homolog 23-like isoform X... 208 1e-51
ref|XP_004235524.1| PREDICTED: pumilio homolog 23-like isoform 1... 206 5e-51
ref|XP_007214984.1| hypothetical protein PRUPE_ppa001862mg [Prun... 204 2e-50
ref|XP_006342893.1| PREDICTED: pumilio homolog 23-like isoform X... 203 4e-50
ref|XP_006465800.1| PREDICTED: pumilio homolog 23-like isoform X... 201 2e-49
ref|XP_006426802.1| hypothetical protein CICLE_v10024928mg [Citr... 201 2e-49
ref|XP_004235525.1| PREDICTED: pumilio homolog 23-like isoform 2... 201 2e-49
gb|EPS70418.1| hypothetical protein M569_04339 [Genlisea aurea] 200 3e-49
emb|CBI35792.3| unnamed protein product [Vitis vinifera] 198 1e-48
emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera] 198 1e-48
ref|XP_007024773.1| Pumilio 23, putative isoform 1 [Theobroma ca... 196 4e-48
ref|XP_004141735.1| PREDICTED: pumilio homolog 23-like [Cucumis ... 196 4e-48
ref|NP_177376.1| pumilio 23 [Arabidopsis thaliana] gi|75268148|s... 190 3e-46
ref|XP_002888869.1| APUM23 [Arabidopsis lyrata subsp. lyrata] gi... 189 5e-46
ref|XP_006390673.1| hypothetical protein EUTSA_v10018182mg [Eutr... 189 9e-46
ref|XP_004303757.1| PREDICTED: pumilio homolog 23-like [Fragaria... 184 2e-44
ref|NP_849878.2| pumilio 23 [Arabidopsis thaliana] gi|42572079|r... 182 6e-44
gb|EXB64656.1| Pumilio-23-like protein [Morus notabilis] 182 8e-44
ref|XP_006300786.1| hypothetical protein CARUB_v10019867mg [Caps... 182 8e-44
>ref|XP_002271118.1| PREDICTED: pumilio homolog 23-like [Vitis vinifera]
Length = 857
Score = 216 bits (551), Expect = 4e-54
Identities = 117/213 (54%), Positives = 143/213 (67%), Gaps = 3/213 (1%)
Frame = +3
Query: 42 MVSIGLRALPLRKHKSHSSSQAGLMADEXXXXXXXXXXXXXXXXXXFHRNDSNKNQN--S 215
MVS G +ALP R+HK+H+ ++ LMA E + + + Q S
Sbjct: 1 MVSFGSKALPSRRHKTHNLTEDNLMAGEDNSYGRRKKDTRRKAAKGYREFEGDHRQKGLS 60
Query: 216 G-GPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEERAAIC 392
G GP K K S + +RKQVDPE AKYFSEIANVIEG EVDLEER+ IC
Sbjct: 61 GWGPDGTVKPEKPFKHKNTSEPKTYRLRKQVDPEMAKYFSEIANVIEGNEVDLEERSVIC 120
Query: 393 STALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSGSHVA 572
ALEEARGKE+ELATDYIISHT+Q LLEGC +D LC FL+SCA DF I+MDRSGSHVA
Sbjct: 121 GNALEEARGKELELATDYIISHTLQALLEGCDVDHLCRFLQSCAKDFPYIAMDRSGSHVA 180
Query: 573 ETALKSLARHLEDDENHSLIEETLSALCEAIAV 671
ETALKSL+ HL+D E+++L+EETL+ +C+ I V
Sbjct: 181 ETALKSLSLHLQDKESYTLVEETLATICKVIVV 213
>ref|XP_006342891.1| PREDICTED: pumilio homolog 23-like isoform X1 [Solanum tuberosum]
gi|565351909|ref|XP_006342892.1| PREDICTED: pumilio
homolog 23-like isoform X2 [Solanum tuberosum]
Length = 731
Score = 208 bits (530), Expect = 1e-51
Identities = 113/212 (53%), Positives = 136/212 (64%), Gaps = 2/212 (0%)
Frame = +3
Query: 42 MVSIGLRALPLRKHKSHSSSQAGLMADEXXXXXXXXXXXXXXXXXXFHR--NDSNKNQNS 215
MVS+GL AL R HK ++ + H N + ++
Sbjct: 1 MVSVGLHALVSRNHKGCDLTEQPTAWENQTNNQWVRKRTMGRKTSKKHAGVNADHTVESV 60
Query: 216 GGPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEERAAICS 395
G A RS K + SF+RKQ+DPETAKYF+EIAN IEGTE+D EER+ IC
Sbjct: 61 SGGNADDNNRSHKDKKTTHVPQTSFLRKQIDPETAKYFAEIANAIEGTEIDPEERSVICG 120
Query: 396 TALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSGSHVAE 575
ALEE RGKE ELATDYIISHT+QTLLEGCSLD LC+FL+SCA +FS I+ DRSGSHV E
Sbjct: 121 NALEETRGKEAELATDYIISHTLQTLLEGCSLDHLCSFLQSCAKNFSHIAADRSGSHVVE 180
Query: 576 TALKSLARHLEDDENHSLIEETLSALCEAIAV 671
TALKSL+ HL+D+ENHSLIE L +C+AI V
Sbjct: 181 TALKSLSFHLQDNENHSLIEHALKKICKAIVV 212
>ref|XP_004235524.1| PREDICTED: pumilio homolog 23-like isoform 1 [Solanum lycopersicum]
Length = 730
Score = 206 bits (524), Expect = 5e-51
Identities = 112/212 (52%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Frame = +3
Query: 42 MVSIGLRALPLRKHKSHSSSQAGLMADEXXXXXXXXXXXXXXXXXXFHR--NDSNKNQNS 215
MVS+GL AL RKH+ ++ + H N ++
Sbjct: 1 MVSVGLHALVSRKHRGCDLTEQPTAWENQTNNQGVRKRTMGRKTSKKHAGVNTDYTVESV 60
Query: 216 GGPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEERAAICS 395
G A R K + SF+RKQ+DPETAKYF+EIAN IEGTE+D EER+ IC
Sbjct: 61 SGGNADDNDRPHKDKKTTPVPQTSFLRKQIDPETAKYFAEIANAIEGTEIDPEERSVICG 120
Query: 396 TALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSGSHVAE 575
ALEE RGKE ELATDYIISHT+QTLLEGCSLD LC FL+SCA +FS I+ DRSGSHV E
Sbjct: 121 NALEETRGKEAELATDYIISHTLQTLLEGCSLDHLCTFLQSCAKNFSHIAADRSGSHVVE 180
Query: 576 TALKSLARHLEDDENHSLIEETLSALCEAIAV 671
TALKSL+ HL+D+ENHSLIE L +C+AI V
Sbjct: 181 TALKSLSFHLQDNENHSLIEHALKKICKAIVV 212
>ref|XP_007214984.1| hypothetical protein PRUPE_ppa001862mg [Prunus persica]
gi|462411134|gb|EMJ16183.1| hypothetical protein
PRUPE_ppa001862mg [Prunus persica]
Length = 753
Score = 204 bits (520), Expect = 2e-50
Identities = 109/208 (52%), Positives = 140/208 (67%)
Frame = +3
Query: 42 MVSIGLRALPLRKHKSHSSSQAGLMADEXXXXXXXXXXXXXXXXXXFHRNDSNKNQNSGG 221
MVS G +ALPLR+ G+M DE N + N N G
Sbjct: 1 MVSFGSKALPLRR-------LGGIMGDEDNSHKRSRKKMGMSRKPDKQSNSFDANVNKNG 53
Query: 222 PVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEERAAICSTA 401
+G+ SH + S ++ S VRKQVDPET KYFSEIAN+IE VD+EER+ +C A
Sbjct: 54 ---SGRG---SHRQSDSETQRSVVRKQVDPETTKYFSEIANLIESNGVDMEERSVVCGNA 107
Query: 402 LEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSGSHVAETA 581
LEEARGKE ELATDY +SHTMQTLLEGC ++ LC+FLRSCA DF I+MDRSGSHVAETA
Sbjct: 108 LEEARGKEFELATDYYLSHTMQTLLEGCDVNSLCSFLRSCAKDFPSIAMDRSGSHVAETA 167
Query: 582 LKSLARHLEDDENHSLIEETLSALCEAI 665
+KSL++HL+D++ +S++E+TL+A+C+ I
Sbjct: 168 IKSLSQHLQDNDVYSVVEDTLNAICKVI 195
>ref|XP_006342893.1| PREDICTED: pumilio homolog 23-like isoform X3 [Solanum tuberosum]
Length = 692
Score = 203 bits (517), Expect = 4e-50
Identities = 102/161 (63%), Positives = 121/161 (75%)
Frame = +3
Query: 189 NDSNKNQNSGGPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVD 368
N + ++ G A RS K + SF+RKQ+DPETAKYF+EIAN IEGTE+D
Sbjct: 13 NADHTVESVSGGNADDNNRSHKDKKTTHVPQTSFLRKQIDPETAKYFAEIANAIEGTEID 72
Query: 369 LEERAAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISM 548
EER+ IC ALEE RGKE ELATDYIISHT+QTLLEGCSLD LC+FL+SCA +FS I+
Sbjct: 73 PEERSVICGNALEETRGKEAELATDYIISHTLQTLLEGCSLDHLCSFLQSCAKNFSHIAA 132
Query: 549 DRSGSHVAETALKSLARHLEDDENHSLIEETLSALCEAIAV 671
DRSGSHV ETALKSL+ HL+D+ENHSLIE L +C+AI V
Sbjct: 133 DRSGSHVVETALKSLSFHLQDNENHSLIEHALKKICKAIVV 173
>ref|XP_006465800.1| PREDICTED: pumilio homolog 23-like isoform X1 [Citrus sinensis]
gi|568822774|ref|XP_006465801.1| PREDICTED: pumilio
homolog 23-like isoform X2 [Citrus sinensis]
Length = 786
Score = 201 bits (511), Expect = 2e-49
Identities = 106/213 (49%), Positives = 136/213 (63%), Gaps = 5/213 (2%)
Frame = +3
Query: 42 MVSIGLRALPLRKHKSHSSSQAGLMADEXXXXXXXXXXXXXXXXXX-----FHRNDSNKN 206
MV++GL+ LP + + + LM + F ++SNKN
Sbjct: 1 MVAVGLKGLPSSRQRLCDLVEDSLMGGDDKSYKPGRKKKGLNRKAKKESFGFDADNSNKN 60
Query: 207 QNSGGPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEERAA 386
+ G + AR + S + S VRKQVDP+ AKYF+EI+N+ E EVDLEER+
Sbjct: 61 SSGRGADGSASARKSWKHQNASDPKTSVVRKQVDPDLAKYFAEISNLFESNEVDLEERSV 120
Query: 387 ICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSGSH 566
+C ALEE RGKE+ELATDYIISHT+QTLLEGC +D LC+FLR CA F I+MDRSGSH
Sbjct: 121 LCRNALEETRGKELELATDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSH 180
Query: 567 VAETALKSLARHLEDDENHSLIEETLSALCEAI 665
VAETALKSLA HL+D+ HS+IEETL ++C+ I
Sbjct: 181 VAETALKSLAMHLQDEHAHSIIEETLKSICKVI 213
>ref|XP_006426802.1| hypothetical protein CICLE_v10024928mg [Citrus clementina]
gi|557528792|gb|ESR40042.1| hypothetical protein
CICLE_v10024928mg [Citrus clementina]
Length = 786
Score = 201 bits (511), Expect = 2e-49
Identities = 106/213 (49%), Positives = 136/213 (63%), Gaps = 5/213 (2%)
Frame = +3
Query: 42 MVSIGLRALPLRKHKSHSSSQAGLMADEXXXXXXXXXXXXXXXXXX-----FHRNDSNKN 206
MV++GL+ LP + + + LM + F ++SNKN
Sbjct: 1 MVAVGLKGLPSSRQRLCDLVEDSLMGGDDKSYKPGRKKKGLNRKAKKESFGFDADNSNKN 60
Query: 207 QNSGGPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEERAA 386
+ G + AR + S + S VRKQVDP+ AKYF+EI+N+ E EVDLEER+
Sbjct: 61 SSGHGADGSASARKSWKHQNASDPKTSVVRKQVDPDLAKYFAEISNLFESNEVDLEERSV 120
Query: 387 ICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSGSH 566
+C ALEE RGKE+ELATDYIISHT+QTLLEGC +D LC+FLR CA F I+MDRSGSH
Sbjct: 121 LCRNALEETRGKELELATDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSH 180
Query: 567 VAETALKSLARHLEDDENHSLIEETLSALCEAI 665
VAETALKSLA HL+D+ HS+IEETL ++C+ I
Sbjct: 181 VAETALKSLAMHLQDEHAHSIIEETLKSICKVI 213
>ref|XP_004235525.1| PREDICTED: pumilio homolog 23-like isoform 2 [Solanum lycopersicum]
Length = 691
Score = 201 bits (510), Expect = 2e-49
Identities = 102/153 (66%), Positives = 117/153 (76%)
Frame = +3
Query: 213 SGGPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEERAAIC 392
SGG A R K + SF+RKQ+DPETAKYF+EIAN IEGTE+D EER+ IC
Sbjct: 22 SGGN-ADDNDRPHKDKKTTPVPQTSFLRKQIDPETAKYFAEIANAIEGTEIDPEERSVIC 80
Query: 393 STALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSGSHVA 572
ALEE RGKE ELATDYIISHT+QTLLEGCSLD LC FL+SCA +FS I+ DRSGSHV
Sbjct: 81 GNALEETRGKEAELATDYIISHTLQTLLEGCSLDHLCTFLQSCAKNFSHIAADRSGSHVV 140
Query: 573 ETALKSLARHLEDDENHSLIEETLSALCEAIAV 671
ETALKSL+ HL+D+ENHSLIE L +C+AI V
Sbjct: 141 ETALKSLSFHLQDNENHSLIEHALKKICKAIVV 173
>gb|EPS70418.1| hypothetical protein M569_04339 [Genlisea aurea]
Length = 839
Score = 200 bits (509), Expect = 3e-49
Identities = 104/148 (70%), Positives = 122/148 (82%)
Frame = +3
Query: 228 AAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEERAAICSTALE 407
A KAR S G+ S AS++RK VDPETAKYFSEI+ I+G E+DLEER+ + ALE
Sbjct: 28 ATEKARKLSK---GNISRASYIRKAVDPETAKYFSEISIAIDGREMDLEERSVLSGNALE 84
Query: 408 EARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSGSHVAETALK 587
EARGKEVELATDYIISHTMQTLLEGCS++ LC+FL+S A F ISMD+SGSHVAETALK
Sbjct: 85 EARGKEVELATDYIISHTMQTLLEGCSVEALCSFLKSSAKTFPHISMDKSGSHVAETALK 144
Query: 588 SLARHLEDDENHSLIEETLSALCEAIAV 671
SLA HLE+DEN+SLI+ETLSALC+ I+V
Sbjct: 145 SLATHLENDENYSLIKETLSALCQEISV 172
>emb|CBI35792.3| unnamed protein product [Vitis vinifera]
Length = 755
Score = 198 bits (504), Expect = 1e-48
Identities = 101/164 (61%), Positives = 120/164 (73%)
Frame = +3
Query: 180 FHRNDSNKNQNSGGPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGT 359
F + K + GP K K S + +RKQVDPE AKYFSEIANVIEG
Sbjct: 26 FEGDHRQKGLSGWGPDGTVKPEKPFKHKNTSEPKTYRLRKQVDPEMAKYFSEIANVIEGN 85
Query: 360 EVDLEERAAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQ 539
EVDLEER+ IC ALEEARGKE+ELATDYIISHT+Q LLEGC +D LC FL+SCA DF
Sbjct: 86 EVDLEERSVICGNALEEARGKELELATDYIISHTLQALLEGCDVDHLCRFLQSCAKDFPY 145
Query: 540 ISMDRSGSHVAETALKSLARHLEDDENHSLIEETLSALCEAIAV 671
I+MDRSGSHVAETALKSL+ HL+D E+++L+EETL+ +C+ I V
Sbjct: 146 IAMDRSGSHVAETALKSLSLHLQDKESYTLVEETLATICKVIVV 189
>emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera]
Length = 1694
Score = 198 bits (504), Expect = 1e-48
Identities = 101/164 (61%), Positives = 120/164 (73%)
Frame = +3
Query: 180 FHRNDSNKNQNSGGPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGT 359
F + K + GP K K S + +RKQVDPE AKYFSEIANVIEG
Sbjct: 26 FEGDHRQKGLSGWGPDGTVKPEKPFKHKNTSEPKTYRLRKQVDPEMAKYFSEIANVIEGN 85
Query: 360 EVDLEERAAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQ 539
EVDLEER+ IC ALEEARGKE+ELATDYIISHT+Q LLEGC +D LC FL+SCA DF
Sbjct: 86 EVDLEERSVICGNALEEARGKELELATDYIISHTLQALLEGCDVDHLCRFLQSCAKDFPY 145
Query: 540 ISMDRSGSHVAETALKSLARHLEDDENHSLIEETLSALCEAIAV 671
I+MDRSGSHVAETALKSL+ HL+D E+++L+EETL+ +C+ I V
Sbjct: 146 IAMDRSGSHVAETALKSLSLHLQDKESYTLVEETLATICKVIVV 189
>ref|XP_007024773.1| Pumilio 23, putative isoform 1 [Theobroma cacao]
gi|590621381|ref|XP_007024774.1| Pumilio 23, putative
isoform 1 [Theobroma cacao] gi|508780139|gb|EOY27395.1|
Pumilio 23, putative isoform 1 [Theobroma cacao]
gi|508780140|gb|EOY27396.1| Pumilio 23, putative isoform
1 [Theobroma cacao]
Length = 723
Score = 196 bits (499), Expect = 4e-48
Identities = 98/158 (62%), Positives = 121/158 (76%), Gaps = 2/158 (1%)
Frame = +3
Query: 204 NQNSGGPVA--AGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEE 377
N+ G V GK + S + S S+ S +RKQV+PETAKYFSEIAN+ E VD+EE
Sbjct: 18 NKKVAGQVTNGTGKFKKSSKHQSNSDSQTSLIRKQVEPETAKYFSEIANLFESQGVDVEE 77
Query: 378 RAAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRS 557
R+ IC ALEEARGKE+ELATDYIISHT+QTLLEGC +D LC+FL+ CA F I+MDRS
Sbjct: 78 RSVICGNALEEARGKELELATDYIISHTLQTLLEGCDVDHLCSFLKGCANVFPAIAMDRS 137
Query: 558 GSHVAETALKSLARHLEDDENHSLIEETLSALCEAIAV 671
GSHVAETALKSLARH++D E++++IEETL +C+ I V
Sbjct: 138 GSHVAETALKSLARHVQDTEDYAIIEETLKMICKVIVV 175
>ref|XP_004141735.1| PREDICTED: pumilio homolog 23-like [Cucumis sativus]
gi|449491830|ref|XP_004159015.1| PREDICTED: LOW QUALITY
PROTEIN: pumilio homolog 23-like [Cucumis sativus]
Length = 756
Score = 196 bits (499), Expect = 4e-48
Identities = 106/212 (50%), Positives = 138/212 (65%), Gaps = 4/212 (1%)
Frame = +3
Query: 42 MVSIGLRALPLRKHKSHSSSQAGLMADEXXXXXXXXXXXXXXXXXXF--HRNDSNKNQNS 215
MVS+G RAL ++HK+ S+ LM ++ H D NK +
Sbjct: 1 MVSVGSRALTSKRHKTCIVSEDHLMGEDKLAHKSGRKKNAMNRKAERGGHGFDENKTHRN 60
Query: 216 GGPVAAGKA--RSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEERAAI 389
+G + F+ K SA ++SF+RKQVDPET KYF EI+N+ VD EER+ I
Sbjct: 61 ASGTDSGMRSNKKFTDSKSTSAPQSSFIRKQVDPETTKYFMEISNLFGSDNVDFEERSVI 120
Query: 390 CSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSGSHV 569
C ALEEA GKE ELATDYIISHTMQ+LLEGC+++ LC FL SCA F I+MDRSGSHV
Sbjct: 121 CGNALEEAVGKEFELATDYIISHTMQSLLEGCNVEDLCNFLHSCANQFPFIAMDRSGSHV 180
Query: 570 AETALKSLARHLEDDENHSLIEETLSALCEAI 665
AETA+KSLA HL+D++ +SL+E+TL+A+C+ I
Sbjct: 181 AETAIKSLAMHLQDEDVYSLVEDTLTAICKEI 212
>ref|NP_177376.1| pumilio 23 [Arabidopsis thaliana]
gi|75268148|sp|Q9C552.1|PUM23_ARATH RecName:
Full=Pumilio homolog 23; Short=APUM-23; Short=AtPUM23
gi|12323652|gb|AAG51785.1|AC067754_1 unknown protein;
96525-92929 [Arabidopsis thaliana]
gi|12325275|gb|AAG52582.1|AC016529_13 putative
RNA-binding domain; 80649-84245 [Arabidopsis thaliana]
gi|14334736|gb|AAK59546.1| putative RNA-binding domain
protein [Arabidopsis thaliana]
gi|15293279|gb|AAK93750.1| putative RNA-binding domain
protein [Arabidopsis thaliana]
gi|332197182|gb|AEE35303.1| pumilio 23 [Arabidopsis
thaliana]
Length = 753
Score = 190 bits (483), Expect = 3e-46
Identities = 102/215 (47%), Positives = 137/215 (63%), Gaps = 7/215 (3%)
Frame = +3
Query: 42 MVSIGLRALPLRKHKSHSSS----QAGLMADEXXXXXXXXXXXXXXXXXXFHRNDSNKNQ 209
MVS+G ++LP R+H++ + G ++ F + S KNQ
Sbjct: 1 MVSVGSKSLPSRRHRTIEEDSLMGERGKSSNNHSERNKGMRRKDHKGNRGFDVDSSKKNQ 60
Query: 210 NSGGP---VAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEER 380
+ G P A+ K F H FVRK++DPET+KYFSEIAN+ + EV+LEER
Sbjct: 61 SGGAPNVKPASKKHSEFEHQN-------QFVRKEIDPETSKYFSEIANLFDSNEVELEER 113
Query: 381 AAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSG 560
+ IC ALEE RG+E E+ATDYIISH +QTLLEGC LD+LC+F+R+ A F I+MDRSG
Sbjct: 114 SVICGNALEETRGREYEIATDYIISHVLQTLLEGCELDQLCSFIRNSASVFPAIAMDRSG 173
Query: 561 SHVAETALKSLARHLEDDENHSLIEETLSALCEAI 665
SHVAE+ALKSLA HLE+ + +S+IEE L ++C+ I
Sbjct: 174 SHVAESALKSLATHLENPDAYSVIEEALHSICKVI 208
>ref|XP_002888869.1| APUM23 [Arabidopsis lyrata subsp. lyrata]
gi|297334710|gb|EFH65128.1| APUM23 [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 189 bits (481), Expect = 5e-46
Identities = 100/215 (46%), Positives = 138/215 (64%), Gaps = 7/215 (3%)
Frame = +3
Query: 42 MVSIGLRALPLRKHKSHSSS----QAGLMADEXXXXXXXXXXXXXXXXXXFHRNDSNKNQ 209
MVS+G ++LP R+H++ + G ++ F + + +NQ
Sbjct: 1 MVSVGSKSLPSRRHRTIEEDCLMGERGKSSNNHGERKKGMRRKDHKGGRGFDGDSNKRNQ 60
Query: 210 NSGGP---VAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEER 380
+ G P A+ K F H FVRK++DPET+KYFSEIAN+ + EV+LEER
Sbjct: 61 SGGAPNVKPASKKQSEFEHQN-------QFVRKEIDPETSKYFSEIANLFDSNEVELEER 113
Query: 381 AAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSG 560
+ IC ALEE RG+E E+ATDYIISH +QTLLEGC LD+LC+F+R+ A F I+MDRSG
Sbjct: 114 SVICGNALEETRGREYEIATDYIISHVLQTLLEGCELDQLCSFIRNSATVFPAIAMDRSG 173
Query: 561 SHVAETALKSLARHLEDDENHSLIEETLSALCEAI 665
SHVAE+ALKSLA HLE+ + +S+IEE L+++C+ I
Sbjct: 174 SHVAESALKSLATHLENPDAYSVIEEALNSICKVI 208
>ref|XP_006390673.1| hypothetical protein EUTSA_v10018182mg [Eutrema salsugineum]
gi|557087107|gb|ESQ27959.1| hypothetical protein
EUTSA_v10018182mg [Eutrema salsugineum]
Length = 749
Score = 189 bits (479), Expect = 9e-46
Identities = 101/215 (46%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Frame = +3
Query: 42 MVSIGLRALPLRKHK----SHSSSQAGLMADEXXXXXXXXXXXXXXXXXXFHRNDSNKNQ 209
MVS+G ++LP R+H+ + G ++ F + + +NQ
Sbjct: 1 MVSVGSKSLPSRRHRIIEEDSLMGERGKSSNNHSSRKKGMGRKAQKGSRGFDGDSNKRNQ 60
Query: 210 NSGGP---VAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEER 380
+SG A K F H FVRK++DPET+KYFSEIAN+ + EVD+EER
Sbjct: 61 SSGAANVKAAPKKQSEFEHQN-------QFVRKEIDPETSKYFSEIANLFDSNEVDIEER 113
Query: 381 AAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSG 560
+ IC ALEE RG+E E+ATDYIISH +QTLLEGC LD+LC+FLR+ A F I+MDRSG
Sbjct: 114 SVICGNALEETRGREYEIATDYIISHVLQTLLEGCQLDQLCSFLRNSATVFPAIAMDRSG 173
Query: 561 SHVAETALKSLARHLEDDENHSLIEETLSALCEAI 665
SHVAE+ALKSLA HLE+ + +S+IEE L+++C+ I
Sbjct: 174 SHVAESALKSLASHLENPDAYSVIEEALTSICKVI 208
>ref|XP_004303757.1| PREDICTED: pumilio homolog 23-like [Fragaria vesca subsp. vesca]
Length = 704
Score = 184 bits (467), Expect = 2e-44
Identities = 89/155 (57%), Positives = 120/155 (77%), Gaps = 7/155 (4%)
Frame = +3
Query: 222 PVAAGKARSFSHDKG-------GSASEASFVRKQVDPETAKYFSEIANVIEGTEVDLEER 380
P G+ RSF G +A+ + VRKQVDPETAKYFSEIAN+ E +D+EER
Sbjct: 7 PEKQGQGRSFDAGAGKTVSGRCSNAATQTVVRKQVDPETAKYFSEIANLFESEGIDIEER 66
Query: 381 AAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMDRSG 560
+++CS ALEE RGKE+ELATDYIISHT+QTL+EGC +D LCAFLR CA +F I+MD+SG
Sbjct: 67 SSLCSNALEETRGKEMELATDYIISHTLQTLVEGCDVDCLCAFLRGCAKNFPLIAMDKSG 126
Query: 561 SHVAETALKSLARHLEDDENHSLIEETLSALCEAI 665
SHVAE+A+K+L+RHL++ + +++IE+TL+ +C+ I
Sbjct: 127 SHVAESAIKALSRHLQESDAYAVIEDTLNTICKVI 161
>ref|NP_849878.2| pumilio 23 [Arabidopsis thaliana] gi|42572079|ref|NP_974130.1|
pumilio 23 [Arabidopsis thaliana]
gi|332197181|gb|AEE35302.1| pumilio 23 [Arabidopsis
thaliana] gi|332197183|gb|AEE35304.1| pumilio 23
[Arabidopsis thaliana]
Length = 731
Score = 182 bits (463), Expect = 6e-44
Identities = 93/165 (56%), Positives = 119/165 (72%), Gaps = 3/165 (1%)
Frame = +3
Query: 180 FHRNDSNKNQNSGGP---VAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVI 350
F + S KNQ+ G P A+ K F H FVRK++DPET+KYFSEIAN+
Sbjct: 29 FDVDSSKKNQSGGAPNVKPASKKHSEFEHQN-------QFVRKEIDPETSKYFSEIANLF 81
Query: 351 EGTEVDLEERAAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYD 530
+ EV+LEER+ IC ALEE RG+E E+ATDYIISH +QTLLEGC LD+LC+F+R+ A
Sbjct: 82 DSNEVELEERSVICGNALEETRGREYEIATDYIISHVLQTLLEGCELDQLCSFIRNSASV 141
Query: 531 FSQISMDRSGSHVAETALKSLARHLEDDENHSLIEETLSALCEAI 665
F I+MDRSGSHVAE+ALKSLA HLE+ + +S+IEE L ++C+ I
Sbjct: 142 FPAIAMDRSGSHVAESALKSLATHLENPDAYSVIEEALHSICKVI 186
>gb|EXB64656.1| Pumilio-23-like protein [Morus notabilis]
Length = 796
Score = 182 bits (462), Expect = 8e-44
Identities = 91/160 (56%), Positives = 113/160 (70%), Gaps = 2/160 (1%)
Frame = +3
Query: 192 DSNKNQNSGGPVAAG--KARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEV 365
D + G A G K +F+ + A S VRKQVDPET KYFSEIAN+ E V
Sbjct: 19 DDTSKKKVSGKAADGSFKTENFAKHRMNYAPHQSVVRKQVDPETTKYFSEIANLFESNGV 78
Query: 366 DLEERAAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQIS 545
DLEERA IC ALEE RG E +LATDYIISHT+Q LLEGC +D LC FLRSCA DF I+
Sbjct: 79 DLEERAVICGNALEETRGNEFQLATDYIISHTLQMLLEGCDIDHLCDFLRSCAKDFPFIA 138
Query: 546 MDRSGSHVAETALKSLARHLEDDENHSLIEETLSALCEAI 665
D+SGSHVAETA++SLA HL+D + +S++E+TL+ +C+ +
Sbjct: 139 TDQSGSHVAETAIRSLAMHLQDSDVYSVVEDTLTMICKVV 178
>ref|XP_006300786.1| hypothetical protein CARUB_v10019867mg [Capsella rubella]
gi|565486295|ref|XP_006300787.1| hypothetical protein
CARUB_v10019867mg [Capsella rubella]
gi|482569496|gb|EOA33684.1| hypothetical protein
CARUB_v10019867mg [Capsella rubella]
gi|482569497|gb|EOA33685.1| hypothetical protein
CARUB_v10019867mg [Capsella rubella]
Length = 729
Score = 182 bits (462), Expect = 8e-44
Identities = 90/158 (56%), Positives = 118/158 (74%)
Frame = +3
Query: 192 DSNKNQNSGGPVAAGKARSFSHDKGGSASEASFVRKQVDPETAKYFSEIANVIEGTEVDL 371
DSNK SGG A + S + + FVRK++DPET+KYFSEIAN+ + EV+L
Sbjct: 32 DSNKRNQSGG---APSVKPVSKKQSEFEHQNQFVRKEIDPETSKYFSEIANLFDSNEVEL 88
Query: 372 EERAAICSTALEEARGKEVELATDYIISHTMQTLLEGCSLDRLCAFLRSCAYDFSQISMD 551
EER+ IC ALEE RG+E E+ATDYIISH +QTLLEGC LD+LC+F+R+ A F I+MD
Sbjct: 89 EERSVICGNALEETRGREYEIATDYIISHVLQTLLEGCELDQLCSFIRNSATVFPAIAMD 148
Query: 552 RSGSHVAETALKSLARHLEDDENHSLIEETLSALCEAI 665
RSGSHVAE+ALK+LA HLE+ + +S+IEE L+++C+ I
Sbjct: 149 RSGSHVAESALKALATHLENPDAYSVIEEALNSICKVI 186