BLASTX nr result

ID: Mentha29_contig00020385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00020385
         (768 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09350.1| unnamed protein product [Arabidopsis thaliana]         66   2e-08
ref|XP_002883251.1| hypothetical protein ARALYDRAFT_342203 [Arab...    65   3e-08
ref|XP_002862843.1| predicted protein [Arabidopsis lyrata subsp....    65   3e-08

>dbj|BAB09350.1| unnamed protein product [Arabidopsis thaliana]
          Length = 472

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
 Frame = -3

Query: 664 RTMNPKVPETHEINLSNNEERAAFASLVTRGIEKTQFPSKEVLVSLGLYDNVKELFDNIG 485
           +TM    P++  +     E++ A   +       T+F ++E+L  +GL + + E F  +G
Sbjct: 14  KTMTSTEPQSEPVAHWTKEDKKALKVISPLPSFPTRFANREILEKMGLLETIDEFFTKMG 73

Query: 484 WGDFIDDTIQDRRTYSKVVLEMLSTFDTTHMN----------INRSVKFQLFGSKHVMSY 335
            G F   T  D  T+S+  ++  ST + T  N          IN  VK + F     +S 
Sbjct: 74  LGAF---TSMDHPTFSEPTVDFFSTMEYTFTNPKIPLAKEGIINFKVKTKAFS----ISI 126

Query: 334 EDIDNAFNVPHGGDQLVDRTFDVQSIWRKLAPNSEEGFRAGYSKSNEVRNPVLRMVLKIL 155
            D+  A+   +  +    +   +   W +LA     G  +  +    VR+PV+R  LK+L
Sbjct: 127 PDLCEAYGFENKSEMSFPKFKGIHFFWGELA----SGKFSCNASIKSVRHPVIRYALKLL 182

Query: 154 GHTIIARSENTSVRNDDLFILHAMLTERSISFCD 53
            H +  R E +S    ++  L   + E  +   D
Sbjct: 183 AHALFGRGETSSTTVSEMCFLFQGVKELLVEDAD 216


>ref|XP_002883251.1| hypothetical protein ARALYDRAFT_342203 [Arabidopsis lyrata subsp.
           lyrata] gi|297329091|gb|EFH59510.1| hypothetical protein
           ARALYDRAFT_342203 [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
 Frame = -3

Query: 562 TQFPSKEVLVSLGLYDNVKELFDNIGWGDFIDDTIQDRRTYSKVVLEMLSTF------DT 401
           T++  +  L  L L   V  LF+ +G  DF++   +   TY+++  + L+T       D 
Sbjct: 51  TRYTDEATLERLHLSQTVSTLFEKMGLSDFVN---KRHLTYTELTKDFLATVEVLQEPDC 107

Query: 400 THMNINRSVKFQLFGSKHVMSYEDIDNAFNVPHGGDQLVDRTFDVQSIWRKLAPNSEEGF 221
                N ++ F +    H+++++D+ N F +  G +    +  D Q  W  +       +
Sbjct: 108 RLTGKNGAIHFVVANENHIVTFDDLANIFGLQKGFEMKYSKVQDPQQYWDAIGGTGR--Y 165

Query: 220 RAGYSKSNEVRNPVLRMVLKILGHTIIARSENTSVRNDDLFILHAML 80
            +G  K+ ++R+P +R   ++L +T  AR    +VR +++ +L+  L
Sbjct: 166 NSGKVKAAQLRHPAVRYAHRVLANTFFARQFTNNVRTEEMHLLYTGL 212


>ref|XP_002862843.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308590|gb|EFH39101.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
 Frame = -3

Query: 562 TQFPSKEVLVSLGLYDNVKELFDNIGWGDFIDDTIQDRRTYSKVVLEMLSTF------DT 401
           T++  +  L  L L   V  LF+ +G  DF++   +   TY+++  + L+T       D 
Sbjct: 51  TRYTDEATLERLHLSQTVSTLFEKMGLSDFVN---KRHLTYTELTKDFLATVEVLQEPDC 107

Query: 400 THMNINRSVKFQLFGSKHVMSYEDIDNAFNVPHGGDQLVDRTFDVQSIWRKLAPNSEEGF 221
                N ++ F +    H+++++D+ N F +  G +    +  D Q  W  +       +
Sbjct: 108 RLTGKNGAIHFVVANENHIVTFDDLANIFGLQKGFEMKYSKVQDPQQYWDAIGGTGR--Y 165

Query: 220 RAGYSKSNEVRNPVLRMVLKILGHTIIARSENTSVRNDDLFILHAML 80
            +G  K+ ++R+P +R   ++L +T  AR    +VR +++ +L+  L
Sbjct: 166 NSGKVKAAQLRHPAVRYAHRVLANTFFARQFTNNVRTEEMHLLYTGL 212


Top