BLASTX nr result
ID: Mentha29_contig00019800
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00019800
(667 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise... 176 5e-42
gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh... 169 6e-40
gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus... 167 3e-39
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub... 163 4e-38
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 163 4e-38
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 163 5e-38
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub... 163 5e-38
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 162 9e-38
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 160 3e-37
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 160 3e-37
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub... 160 4e-37
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a... 159 6e-37
gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptid... 159 6e-37
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 158 1e-36
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 158 1e-36
ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob... 158 2e-36
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob... 158 2e-36
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub... 158 2e-36
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a... 156 6e-36
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun... 154 2e-35
>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
Length = 1205
Score = 176 bits (447), Expect = 5e-42
Identities = 85/94 (90%), Positives = 88/94 (93%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDSSQMHICRKCK MANVIQRPV GG+K+RGPYCRF
Sbjct: 1110 EMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPVFGGRKVRGPYCRFC 1169
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E VEDVVRVNVPYGAKLLCQELFSMGISL F+TE
Sbjct: 1170 ESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTE 1203
Score = 70.5 bits (171), Expect(2) = 2e-24
Identities = 35/52 (67%), Positives = 37/52 (71%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ LKYATPFS+PSVEDITAQLHRLG+SRW
Sbjct: 994 AFPSRQTPGQLLEAALGKGIALGGGLKYATPFSSPSVEDITAQLHRLGFSRW 1045
Score = 68.9 bits (167), Expect(2) = 2e-24
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF + GIVPDIV
Sbjct: 955 GDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIV 989
>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
Length = 821
Score = 169 bits (429), Expect = 6e-40
Identities = 81/94 (86%), Positives = 87/94 (92%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDSSQMH+CRKC+ MANVIQR V GG+KIRGPYCRF
Sbjct: 726 EMERDCLIAHGAAANLHERLFTLSDSSQMHVCRKCQNMANVIQRSVFGGRKIRGPYCRFC 785
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
+ VEDVVR+NVPYGAKLLCQELFSMGISL F+TE
Sbjct: 786 DSVEDVVRLNVPYGAKLLCQELFSMGISLKFDTE 819
Score = 71.6 bits (174), Expect(2) = 2e-25
Identities = 35/54 (64%), Positives = 38/54 (70%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWNE 402
AFPSRQTPGQ LKYATPFSTPSV+DITAQLHRLG+SRW +
Sbjct: 610 AFPSRQTPGQLLEAALGKGIALGGALKYATPFSTPSVDDITAQLHRLGFSRWGD 663
Score = 70.9 bits (172), Expect(2) = 2e-25
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF K+GIVPDIV
Sbjct: 571 GDKFSSMHGQKGVLGFLESQENFPFTKEGIVPDIV 605
>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
Length = 1211
Score = 167 bits (423), Expect = 3e-39
Identities = 84/96 (87%), Positives = 87/96 (90%), Gaps = 2/96 (2%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVS--GGKKIRGPYCR 241
EMERDCLIA GAAANLHERLFTLSDSSQMHICRKCK MANVIQRP S GG+KIRGP+CR
Sbjct: 1114 EMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPGSGGGGRKIRGPFCR 1173
Query: 240 FRELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E VEDVVRVNVPYGAKLLCQELFSMGISL F+TE
Sbjct: 1174 VCESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTE 1209
Score = 70.5 bits (171), Expect(2) = 2e-24
Identities = 35/52 (67%), Positives = 37/52 (71%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ LKYATPFS+PSVEDITAQLHRLG+SRW
Sbjct: 998 AFPSRQTPGQLLEAALGKGIALGGGLKYATPFSSPSVEDITAQLHRLGFSRW 1049
Score = 68.9 bits (167), Expect(2) = 2e-24
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF++ GIVPDIV
Sbjct: 959 GDKFSSMHGQKGVLGFLESQENFPFSQQGIVPDIV 993
>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
lycopersicum]
Length = 1219
Score = 163 bits (413), Expect = 4e-38
Identities = 80/94 (85%), Positives = 85/94 (90%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDSSQMHIC KCK MANVIQRPV GG K+RGP+CRF
Sbjct: 1125 EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRPVPGG-KVRGPFCRFC 1183
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E VED+V+V VPYGAKLLCQELFSMGISL F+TE
Sbjct: 1184 ESVEDIVKVGVPYGAKLLCQELFSMGISLKFDTE 1217
Score = 66.2 bits (160), Expect(2) = 2e-18
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LG+LESQENFPF GIVPDIV
Sbjct: 970 GDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIV 1004
Score = 52.8 bits (125), Expect(2) = 2e-18
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ KYATPFS SV+ I QLH G+SRW
Sbjct: 1009 AFPSRQTPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRW 1060
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
Length = 1019
Score = 163 bits (413), Expect = 4e-38
Identities = 78/94 (82%), Positives = 85/94 (90%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDSSQMHICRKC +ANVIQR V GG+KIRGPYCRF
Sbjct: 924 EMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGGRKIRGPYCRFC 983
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E VE++VRVNVPYGAKLL QELFSMGI++ F+TE
Sbjct: 984 ESVEEIVRVNVPYGAKLLAQELFSMGITMKFDTE 1017
Score = 67.0 bits (162), Expect(2) = 1e-20
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF GIVPDIV
Sbjct: 769 GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIV 803
Score = 59.3 bits (142), Expect(2) = 1e-20
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ KYATPFST SV+ +T QLHR G+SRW
Sbjct: 808 AFPSRQTPGQLLEAALGKGIACGGLQKYATPFSTLSVDAVTDQLHRAGFSRW 859
>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1217
Score = 163 bits (412), Expect = 5e-38
Identities = 80/94 (85%), Positives = 85/94 (90%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDSSQMHIC KCK MANVIQR V GG K+RGP+CRF
Sbjct: 1123 EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFC 1181
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E VED+V+VNVPYGAKLLCQELFSMGISL F+TE
Sbjct: 1182 ESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTE 1215
Score = 67.0 bits (162), Expect(2) = 5e-18
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF GIVPDIV
Sbjct: 968 GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIV 1002
Score = 50.4 bits (119), Expect(2) = 5e-18
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ KYATPFST SV+ I QL G++RW
Sbjct: 1007 AFPSRQTPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRW 1058
>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
lycopersicum]
Length = 1217
Score = 163 bits (412), Expect = 5e-38
Identities = 80/94 (85%), Positives = 85/94 (90%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDSSQMHIC KCK MANVIQR V GG K+RGP+CRF
Sbjct: 1123 EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFC 1181
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E VED+V+VNVPYGAKLLCQELFSMGISL F+TE
Sbjct: 1182 ESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTE 1215
Score = 67.0 bits (162), Expect(2) = 5e-18
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF GIVPDIV
Sbjct: 968 GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIV 1002
Score = 50.4 bits (119), Expect(2) = 5e-18
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ KYATPFST SV+ I QL G++RW
Sbjct: 1007 AFPSRQTPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRW 1058
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 162 bits (410), Expect = 9e-38
Identities = 77/93 (82%), Positives = 85/93 (91%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GA+ANLHERLFTLSDSSQMHIC+KCK +ANVIQR V GG+KIRGPYCR
Sbjct: 1108 EMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVC 1167
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFET 136
E V+++V+VNVPYGAKLLCQELFSMGISL FET
Sbjct: 1168 ESVDEIVKVNVPYGAKLLCQELFSMGISLKFET 1200
Score = 68.9 bits (167), Expect(2) = 2e-21
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF + GIVPDIV
Sbjct: 953 GDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIV 987
Score = 59.7 bits (143), Expect(2) = 2e-21
Identities = 30/52 (57%), Positives = 33/52 (63%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
+FPSRQTPGQ +KYATPFST SVE IT QLHR G+SRW
Sbjct: 992 SFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRW 1043
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 160 bits (406), Expect = 3e-37
Identities = 74/94 (78%), Positives = 86/94 (91%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDS+ MHICR+CK ++NVIQR V+GG+K+RGPYCR+
Sbjct: 1125 EMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYC 1184
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E E++V+VNVPYGAKLLCQELFSMGISL FET+
Sbjct: 1185 ESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQ 1218
Score = 67.0 bits (162), Expect(2) = 3e-19
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF GIVPDIV
Sbjct: 970 GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIV 1004
Score = 54.7 bits (130), Expect(2) = 3e-19
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ L++ATPFST SV+ I QLHR G+SRW
Sbjct: 1009 AFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRW 1060
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 160 bits (406), Expect = 3e-37
Identities = 74/94 (78%), Positives = 86/94 (91%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDS+ MHICR+CK ++NVIQR V+GG+K+RGPYCR+
Sbjct: 1103 EMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYC 1162
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E E++V+VNVPYGAKLLCQELFSMGISL FET+
Sbjct: 1163 ESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQ 1196
Score = 67.0 bits (162), Expect(2) = 3e-19
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF GIVPDIV
Sbjct: 948 GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIV 982
Score = 54.7 bits (130), Expect(2) = 3e-19
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ L++ATPFST SV+ I QLHR G+SRW
Sbjct: 987 AFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRW 1038
>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
sativus]
Length = 1197
Score = 160 bits (404), Expect = 4e-37
Identities = 74/94 (78%), Positives = 86/94 (91%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GA+ANLHERLFTLSDSSQMH+C+KCK +A+VIQR V+GG+K+RGPYCR
Sbjct: 1102 EMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKMRGPYCRVC 1161
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E +D+VRVNVPYGAKLLCQELFSMGI+L FET+
Sbjct: 1162 ESFDDIVRVNVPYGAKLLCQELFSMGINLKFETQ 1195
Score = 67.0 bits (162), Expect(2) = 7e-22
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF GIVPDIV
Sbjct: 947 GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIV 981
Score = 63.5 bits (153), Expect(2) = 7e-22
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ LKYATPFSTPSV+ IT QLHR G+SRW
Sbjct: 986 AFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRW 1037
>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1219
Score = 159 bits (403), Expect = 6e-37
Identities = 79/94 (84%), Positives = 84/94 (89%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDSSQMHIC KCK MANVIQR GG KIRGP+CRF
Sbjct: 1125 EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFC 1183
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E VED+V+V+VPYGAKLLCQELFSMGISL F+TE
Sbjct: 1184 ESVEDIVKVDVPYGAKLLCQELFSMGISLKFDTE 1217
Score = 66.2 bits (160), Expect(2) = 2e-18
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LG+LESQENFPF GIVPDIV
Sbjct: 970 GDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIV 1004
Score = 52.8 bits (125), Expect(2) = 2e-18
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ KYATPFS SV+ I QLH G+SRW
Sbjct: 1009 AFPSRQTPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRW 1060
>gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative
[Solanum bulbocastanum]
Length = 304
Score = 159 bits (403), Expect = 6e-37
Identities = 79/94 (84%), Positives = 84/94 (89%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDSSQMHIC KCK MANVIQR GG KIRGP+CRF
Sbjct: 210 EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFC 268
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E VED+V+V+VPYGAKLLCQELFSMGISL F+TE
Sbjct: 269 ESVEDIVKVDVPYGAKLLCQELFSMGISLKFDTE 302
Score = 66.2 bits (160), Expect(2) = 5e-19
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LG+LESQENFPF GIVPDIV
Sbjct: 55 GDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIV 89
Score = 54.7 bits (130), Expect(2) = 5e-19
Identities = 28/52 (53%), Positives = 30/52 (57%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ KYATPFST SV+ I QLH G+SRW
Sbjct: 94 AFPSRQTPGQLLEASLGKGIALGGGEKYATPFSTLSVDAILKQLHGRGFSRW 145
>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Citrus sinensis]
gi|557545145|gb|ESR56123.1| hypothetical protein
CICLE_v10018562mg [Citrus clementina]
Length = 1198
Score = 158 bits (400), Expect = 1e-36
Identities = 74/94 (78%), Positives = 83/94 (88%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GAAANLHERLFTLSDS QMHICRKCK +ANVIQR V GG+K+RGPYCR
Sbjct: 1103 EMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGGRKVRGPYCRIC 1162
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
+ +D+V+ NVPYGAKLLCQELFSMGI+L F+TE
Sbjct: 1163 DSGDDIVKANVPYGAKLLCQELFSMGITLKFDTE 1196
Score = 67.0 bits (162), Expect(2) = 5e-19
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF GIVPDIV
Sbjct: 942 GDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIV 976
Score = 53.9 bits (128), Expect(2) = 5e-19
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXL------KYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ +YATPF+TPSV+ IT QLHR G+S+W
Sbjct: 981 AFPSRQTPGQLLEAALGKGIAALGKGICSGLKRYATPFATPSVDAITEQLHRAGFSKW 1038
>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1181
Score = 158 bits (400), Expect = 1e-36
Identities = 75/93 (80%), Positives = 85/93 (91%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GA+ANLHERLFTLSDSS+MHIC+KCK +ANVIQR V GG+KIRGPYCR
Sbjct: 1086 EMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYCRVC 1145
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFET 136
E V+D+V+V+VPYGAKLLCQELFSMGISL F+T
Sbjct: 1146 ESVDDLVKVSVPYGAKLLCQELFSMGISLKFDT 1178
Score = 66.6 bits (161), Expect(2) = 1e-19
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF G+VPDIV
Sbjct: 931 GDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIV 965
Score = 56.2 bits (134), Expect(2) = 1e-19
Identities = 28/52 (53%), Positives = 31/52 (59%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ +YATPFST SV+DI QLHR +SRW
Sbjct: 970 AFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRW 1021
>ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase
isoform 2 [Theobroma cacao]
Length = 961
Score = 158 bits (399), Expect = 2e-36
Identities = 74/94 (78%), Positives = 84/94 (89%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GA+ANLHERL TLSDSSQMH+CR CK +ANVI+R V GG+KIRGPYCR
Sbjct: 866 EMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGGRKIRGPYCRGC 925
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
+ V+D+VRVNVPYGAKLLCQELFSMGI+L FET+
Sbjct: 926 QSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQ 959
Score = 67.8 bits (164), Expect(2) = 2e-19
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF GIVPDIV
Sbjct: 707 GDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIV 741
Score = 54.3 bits (129), Expect(2) = 2e-19
Identities = 30/56 (53%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQL----HRLGYSRW 408
AFPSRQTPGQ +KYATPFST SV+ IT QL HR G+SRW
Sbjct: 746 AFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTISVDAITEQLHSICHRAGFSRW 801
>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 1184
Score = 158 bits (399), Expect = 2e-36
Identities = 74/94 (78%), Positives = 84/94 (89%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GA+ANLHERL TLSDSSQMH+CR CK +ANVI+R V GG+KIRGPYCR
Sbjct: 1089 EMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGGRKIRGPYCRGC 1148
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
+ V+D+VRVNVPYGAKLLCQELFSMGI+L FET+
Sbjct: 1149 QSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQ 1182
Score = 67.8 bits (164), Expect(2) = 4e-21
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF GIVPDIV
Sbjct: 934 GDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIV 968
Score = 60.1 bits (144), Expect(2) = 4e-21
Identities = 30/52 (57%), Positives = 33/52 (63%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ +KYATPFST SV+ IT QLHR G+SRW
Sbjct: 973 AFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTISVDAITEQLHRAGFSRW 1024
>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
arietinum]
Length = 1199
Score = 158 bits (399), Expect = 2e-36
Identities = 75/94 (79%), Positives = 84/94 (89%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GA+ANL+ERLFTLSDSSQ+HIC KCK +ANVI RPVSGG+KIRGPYCRF
Sbjct: 1104 EMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRFC 1163
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E +D+V +VPYGAKLLCQELFSMGI+L FETE
Sbjct: 1164 ESADDIVVAHVPYGAKLLCQELFSMGINLKFETE 1197
Score = 70.1 bits (170), Expect(2) = 7e-21
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF K GIVPDIV
Sbjct: 949 GDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIV 983
Score = 57.0 bits (136), Expect(2) = 7e-21
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ L+ ATPFST SVE IT QLHR G+SRW
Sbjct: 988 AFPSRQTPGQLLEAALGKGIACVGSLRNATPFSTSSVEAITDQLHRAGFSRW 1039
>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Glycine max]
Length = 1205
Score = 156 bits (394), Expect = 6e-36
Identities = 74/94 (78%), Positives = 84/94 (89%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GA+ANL+ERLFTLSDSSQ+HIC KCKK+ANVI RPVSGG+KIRGPYCR
Sbjct: 1110 EMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKKVANVILRPVSGGRKIRGPYCRHC 1169
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFETE 133
E +D+V +VPYGAKLLCQELFSMGI+L FET+
Sbjct: 1170 ESADDIVVAHVPYGAKLLCQELFSMGINLKFETQ 1203
Score = 68.9 bits (167), Expect(2) = 1e-21
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF + GIVPDIV
Sbjct: 955 GDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIV 989
Score = 60.8 bits (146), Expect(2) = 1e-21
Identities = 31/52 (59%), Positives = 33/52 (63%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ LK ATPFSTPSV+ IT QLHR G+SRW
Sbjct: 994 AFPSRQTPGQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHRAGFSRW 1045
>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
gi|462422378|gb|EMJ26641.1| hypothetical protein
PRUPE_ppa000410mg [Prunus persica]
Length = 1200
Score = 154 bits (390), Expect = 2e-35
Identities = 73/93 (78%), Positives = 83/93 (89%)
Frame = -2
Query: 414 EMERDCLIAQGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFR 235
EMERDCLIA GA+ANLHERLFTLSDSSQMH+C+KCK +A VI R V+GG+KIRGP+CR
Sbjct: 1105 EMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVAYVILRTVAGGRKIRGPHCRIC 1164
Query: 234 ELVEDVVRVNVPYGAKLLCQELFSMGISLSFET 136
+ +D+VRVNVPYGAKLLCQELFSMGISL FET
Sbjct: 1165 DSADDLVRVNVPYGAKLLCQELFSMGISLKFET 1197
Score = 66.6 bits (161), Expect(2) = 2e-20
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = -1
Query: 667 GDKFSSMHGQKGALGFLESQENFPFNKDGIVPDIV 563
GDKFSSMHGQKG LGFLESQENFPF G+VPDIV
Sbjct: 950 GDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIV 984
Score = 59.3 bits (142), Expect(2) = 2e-20
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -3
Query: 563 AFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRW 408
AFPSRQTPGQ +YATPFST SV+DIT QLH G+SRW
Sbjct: 989 AFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHSAGFSRW 1040