BLASTX nr result
ID: Mentha29_contig00019547
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00019547
(810 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus... 214 2e-53
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 171 2e-40
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 171 2e-40
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 169 9e-40
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 167 6e-39
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 166 7e-39
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 165 2e-38
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 165 2e-38
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 164 3e-38
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 164 3e-38
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 163 8e-38
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218... 161 2e-37
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 161 2e-37
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 160 4e-37
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 159 1e-36
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi... 159 1e-36
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 158 3e-36
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 158 3e-36
gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis th... 157 6e-36
ref|NP_181532.2| nuclear RNA polymerase D1B [Arabidopsis thalian... 157 6e-36
>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
Length = 2113
Score = 214 bits (546), Expect = 2e-53
Identities = 110/192 (57%), Positives = 132/192 (68%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
E E++MKNIRR+MHQTGY DGD L ADDQ YIVDNV N+HP+K++K GAGLD+I V +HS
Sbjct: 1929 ETETIMKNIRRVMHQTGYNDGDPLSADDQKYIVDNVLNHHPEKSLKIGAGLDHIMVNKHS 1988
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
EFQ SRC Y V++DG ADFSYRKCL+NF++ KYP+ AESFI KYFKKPQPR GWN + +
Sbjct: 1989 EFQMSRCLYAVTIDGSKADFSYRKCLDNFIRGKYPDVAESFIAKYFKKPQPRTGWNNNSK 2048
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTDGVAQTPIQQSEAGTPS 271
PPR EAGTP WN + TP P ++G P GWN +TP Q TP
Sbjct: 2049 -DRPPRSEAGTP-NWNRD--------STPAPPEDSGTP-GWN--NTDRTP-GQDNVSTPD 2094
Query: 270 GWDSASTPAADE 235
S+ A DE
Sbjct: 2095 WNKSSQFSATDE 2106
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 171 bits (434), Expect = 2e-40
Identities = 81/137 (59%), Positives = 98/137 (71%), Gaps = 10/137 (7%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
++E +M++IRRIMHQ GY DGD L ADDQ+YI+D VFN HPDKAVK G G+DY+ V RHS
Sbjct: 1749 DVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMVSRHS 1808
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQ---------- 481
F +SRCFY VS DG DFSYRKCLENF+KEKYP+ AE+FI KYF++P+
Sbjct: 1809 SFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRERSVI 1868
Query: 480 PRPGWNRDQQGPPPPRG 430
P G NR+Q P G
Sbjct: 1869 PEDGGNREQSVVPEETG 1885
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 171 bits (434), Expect = 2e-40
Identities = 81/137 (59%), Positives = 98/137 (71%), Gaps = 10/137 (7%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
++E +M++IRRIMHQ GY DGD L ADDQ+YI+D VFN HPDKAVK G G+DY+ V RHS
Sbjct: 1689 DVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMVSRHS 1748
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQ---------- 481
F +SRCFY VS DG DFSYRKCLENF+KEKYP+ AE+FI KYF++P+
Sbjct: 1749 SFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRERSVI 1808
Query: 480 PRPGWNRDQQGPPPPRG 430
P G NR+Q P G
Sbjct: 1809 PEDGGNREQSVVPEETG 1825
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 169 bits (429), Expect = 9e-40
Identities = 80/127 (62%), Positives = 96/127 (75%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
+IE LM +IRRIMHQTGY DGD L ADDQ+Y++DNVF+YHPDKAVK GAG+D++TV RHS
Sbjct: 1793 DIEPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNVFHYHPDKAVKMGAGIDHVTVSRHS 1852
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
FQ+SRCFY VS DG DFSYRKCLENF+K KYP+ A+ FI KYF + ++Q
Sbjct: 1853 NFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFAR-------RGNRQ 1905
Query: 450 GPPPPRG 430
P P G
Sbjct: 1906 RTPAPEG 1912
>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
gi|561006762|gb|ESW05756.1| hypothetical protein
PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 167 bits (422), Expect = 6e-39
Identities = 82/151 (54%), Positives = 103/151 (68%), Gaps = 3/151 (1%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
EIE +M++IRRIM Q GY DGD L ADDQ ++++NVF +HPDK K GAG+DY+ V +HS
Sbjct: 1904 EIEPIMQSIRRIMQQQGYNDGDPLAADDQLFVLENVFEHHPDKDTKMGAGIDYVMVNKHS 1963
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPR---PGWNR 460
FQDSRCFY V DG DFSYRKCL+N++++KYPE AESF KYF+KP+ R R
Sbjct: 1964 SFQDSRCFYVVLKDGRREDFSYRKCLDNWIRKKYPELAESFFGKYFRKPRNRAEQTATPR 2023
Query: 459 DQQGPPPPRGEAGTPRGWNGEEGGTPWGAQT 367
Q PPR EA TP ++ TP +T
Sbjct: 2024 GDQTAMPPRDEAATP----ADQTSTPGPVET 2050
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 166 bits (421), Expect = 7e-39
Identities = 75/125 (60%), Positives = 96/125 (76%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
++E +M++IRRIMHQ+GY DGDRL ADD+++I DNVFNYHPDKA+K GAG+D+ V +H
Sbjct: 1737 DVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGAGIDHFKVDKHG 1796
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
FQDSRC + VS DG DFSYRKCLE+F++ KYPE + FI KYF++ PR G NR+
Sbjct: 1797 SFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPEFVDEFIGKYFRR--PRSGGNREPS 1854
Query: 450 GPPPP 436
PP P
Sbjct: 1855 LPPVP 1859
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 165 bits (418), Expect = 2e-38
Identities = 74/141 (52%), Positives = 95/141 (67%), Gaps = 10/141 (7%)
Frame = -1
Query: 807 IESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHSE 628
IE MK+IRRIMH++GY DGD + +DQ++I+DNVFNYHPDKA K G+G+D++ + RHS
Sbjct: 1904 IEPTMKSIRRIMHKSGYNDGDPIRPEDQSFIIDNVFNYHPDKAAKMGSGIDHLMISRHSS 1963
Query: 627 FQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQ----------P 478
FQDSRC Y VS DG DFSYRKCL N +K ++P+ A+ F+ KYF+KP+ P
Sbjct: 1964 FQDSRCLYVVSTDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYFRKPKPGGNQDRISTP 2023
Query: 477 RPGWNRDQQGPPPPRGEAGTP 415
P WN Q P P G P
Sbjct: 2024 EPAWNNTQAPTPEPSGNTMAP 2044
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 165 bits (417), Expect = 2e-38
Identities = 74/124 (59%), Positives = 95/124 (76%)
Frame = -1
Query: 807 IESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHSE 628
+E +M++IRRIMHQ+GY DGDRL ADD+++I DNVFNYHPDKA+K GAG+D+ V +H
Sbjct: 1736 VEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGAGIDHFKVDKHGS 1795
Query: 627 FQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQG 448
FQDSRC + VS DG DFSYRKCLE+F++ KYP+ + FI KYF++ PR G NR+
Sbjct: 1796 FQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPDLVDEFIGKYFRR--PRSGGNREPSL 1853
Query: 447 PPPP 436
PP P
Sbjct: 1854 PPVP 1857
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 164 bits (416), Expect = 3e-38
Identities = 79/152 (51%), Positives = 104/152 (68%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
+IE +M++IR++MHQ+GY DGD L A+DQ++++ +VFN+HPDKA K GAG+D+ V RHS
Sbjct: 1814 DIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHS 1873
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
FQ+SRCFY V+ DG DFSYRKCL+NF+K KYP+ AE F+ KYF+K PRP NRD+
Sbjct: 1874 SFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRK--PRPNRNRDRN 1931
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQ 355
P E + GE P AQ Q
Sbjct: 1932 ----PASEENENKSIGGELTPIPEEAQNGSQQ 1959
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 164 bits (416), Expect = 3e-38
Identities = 79/152 (51%), Positives = 104/152 (68%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
+IE +M++IR++MHQ+GY DGD L A+DQ++++ +VFN+HPDKA K GAG+D+ V RHS
Sbjct: 1874 DIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHS 1933
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
FQ+SRCFY V+ DG DFSYRKCL+NF+K KYP+ AE F+ KYF+K PRP NRD+
Sbjct: 1934 SFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRK--PRPNRNRDRN 1991
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQ 355
P E + GE P AQ Q
Sbjct: 1992 ----PASEENENKSIGGELTPIPEEAQNGSQQ 2019
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 163 bits (412), Expect = 8e-38
Identities = 79/164 (48%), Positives = 104/164 (63%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
+IE +M++IRRIM Q GY DGD L A+DQ ++++NVF +HPDK K G G+DY+ V +HS
Sbjct: 1927 DIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHS 1986
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
FQ+SRCFY V DG DFSYRKCL N++ +KYP+ AESF+ KYF+KP+ R Q
Sbjct: 1987 SFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRA-----RGDQ 2041
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTD 319
P R EA TP GE+ TP + P + P T+
Sbjct: 2042 TATPGRDEAATP----GEQTATPGRDEAATPAEQISTPTPMETN 2081
>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1|
Protein DCL [Medicago truncatula]
Length = 481
Score = 161 bits (408), Expect = 2e-37
Identities = 92/196 (46%), Positives = 114/196 (58%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
+IE ++++IRRIM GY DGD L +DQ Y+++NVF +HPDK K G G+D++ V +HS
Sbjct: 299 DIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHS 358
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
FQDSRC Y V DG DFSYRKCLEN +++KYPE AESF KYF+KPQPR RDQ
Sbjct: 359 NFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRV--KRDQ- 415
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTDGVAQTPIQQSEAGTPS 271
P P GE GE+ P G Q+ P G T TP +E TP
Sbjct: 416 -TPNPAGEQTAAPNPAGEQTAAP---NPAGEQTATQNPPGEQT----STP-NPAEEQTP- 465
Query: 270 GWDSASTPAADEGGTP 223
TPA D+ TP
Sbjct: 466 ------TPAGDQTSTP 475
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 161 bits (408), Expect = 2e-37
Identities = 92/196 (46%), Positives = 114/196 (58%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
+IE ++++IRRIM GY DGD L +DQ Y+++NVF +HPDK K G G+D++ V +HS
Sbjct: 1850 DIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHS 1909
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
FQDSRC Y V DG DFSYRKCLEN +++KYPE AESF KYF+KPQPR RDQ
Sbjct: 1910 NFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRV--KRDQ- 1966
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTDGVAQTPIQQSEAGTPS 271
P P GE GE+ P G Q+ P G T TP +E TP
Sbjct: 1967 -TPNPAGEQTAAPNPAGEQTAAP---NPAGEQTATQNPPGEQT----STP-NPAEEQTP- 2016
Query: 270 GWDSASTPAADEGGTP 223
TPA D+ TP
Sbjct: 2017 ------TPAGDQTSTP 2026
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 160 bits (406), Expect = 4e-37
Identities = 76/131 (58%), Positives = 94/131 (71%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
E+ESLM++IRRIMHQ+G DG+ L DDQTY++DN+ NYHPDKA K GAG+D+ITV++HS
Sbjct: 1760 EVESLMQSIRRIMHQSGCVDGEPLLPDDQTYLIDNILNYHPDKAAKIGAGVDFITVKKHS 1819
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
FQ+SRCFY VS DG DFSY KC+E F+K KYP AESF KYF++ Q R Q
Sbjct: 1820 NFQESRCFYVVSTDGKDTDFSYIKCIETFVKGKYPSVAESFTSKYFRRSQ------RPQP 1873
Query: 450 GPPPPRGEAGT 418
P P + T
Sbjct: 1874 ASPSPASPSPT 1884
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 159 bits (402), Expect = 1e-36
Identities = 67/107 (62%), Positives = 88/107 (82%)
Frame = -1
Query: 807 IESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHSE 628
IE +M+++RRIMHQ+GY DGD L DDQ++++DNVFNYHPDKA K G G+D++TV RH
Sbjct: 1718 IEPVMRSLRRIMHQSGYNDGDPLSGDDQSFVLDNVFNYHPDKAAKMGCGIDHLTVNRHGS 1777
Query: 627 FQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKK 487
FQDSRCF+ VS DG DFSYRKCL+N+++EK+P+ AE+FI KYF +
Sbjct: 1778 FQDSRCFFVVSTDGRTEDFSYRKCLDNYIREKFPDLAETFIGKYFSR 1824
>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
NRPD1b [Arabidopsis lyrata subsp. lyrata]
Length = 1947
Score = 159 bits (402), Expect = 1e-36
Identities = 84/208 (40%), Positives = 124/208 (59%), Gaps = 2/208 (0%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
++E +M+ +R+IMH + Y DGD + DD+T++++ + N+HP K K G+G+D+ITV +H+
Sbjct: 1742 DVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHT 1801
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
F DSRCF+ VS DG DFSYRK L N+L KYP++AE FI KYF KP+P +R+ Q
Sbjct: 1802 IFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMMKYPDRAEEFIDKYFTKPRPSGNRDRNNQ 1861
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGP-QSEAGAPRGWNTDGVAQTPIQ-QSEAGT 277
PP E P + GG + QT P Q++A A AQ+P Q Q+++ +
Sbjct: 1862 DATPPGEEQSQPPTQSIGNGGDDFNTQTQSPSQTQAQA----QAQAQAQSPSQTQTQSPS 1917
Query: 276 PSGWDSASTPAADEGGTPWGSQADSGPQ 193
PS + S P+ + SQ+ S Q
Sbjct: 1918 PSQTQTQS-PSQTQAQAQSPSQSPSQTQ 1944
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 158 bits (399), Expect = 3e-36
Identities = 69/110 (62%), Positives = 90/110 (81%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
++E LM++IR+IMHQ+GY DGD L A DQ++I++NVF +HPDKA+K GAG+DY+ V +HS
Sbjct: 1659 DVEPLMQSIRKIMHQSGYNDGDPLSALDQSFILENVFTHHPDKAIKMGAGVDYVMVSKHS 1718
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQ 481
F DSRCFY VS DG DFSYRKCL+NF+K KYP+ A+ FI KYF+KP+
Sbjct: 1719 NFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGKYPDMADVFIAKYFRKPR 1768
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 158 bits (399), Expect = 3e-36
Identities = 85/171 (49%), Positives = 108/171 (63%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
+IE ++++IRRIM Q GY DGD L A+DQ Y+++NVF +HPDK K G G+D++ V RHS
Sbjct: 2085 DIEPIVQSIRRIMQQQGYNDGDPLAAEDQQYVLENVFEHHPDKETKMGVGIDHVMVSRHS 2144
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
FQ+SRCFY V DG DFSYRKCLE+F+++KY + AESF KYF+KP+P+ RDQ
Sbjct: 2145 NFQESRCFYVVLKDGKKEDFSYRKCLESFVRKKYADTAESFCGKYFRKPRPK----RDQI 2200
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTDGVAQTPI 298
GE G GE+ TP G QT P G T G QT I
Sbjct: 2201 A--NSGGEQTANPG--GEQTATPGGEQTTTP--NGGEQTATPTPGGEQTTI 2245
>gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis thaliana]
Length = 1976
Score = 157 bits (396), Expect = 6e-36
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
++E +M+ +R+IMH + Y DGD + DD+T++++ + N+HP K K G+G+D+ITV +H+
Sbjct: 1742 DVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHT 1801
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
F DSRCF+ VS DG DFSYRK L N+L +KYP++AE FI KYF KP+P +R+ Q
Sbjct: 1802 IFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPRPSGNRDRNNQ 1861
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPG---PQSEAGAPRGWNTDGVAQTPIQQSEAG 280
PP E P + GG + QT Q+ A +P +QT Q
Sbjct: 1862 DATPPGEEQSQPPNQSIGNGGDDFQTQTQSQSPSQTRAQSPSQAQAQSPSQTQSQSQSQS 1921
Query: 279 TPSGWDSASTPAADEGGTPWGSQADSGPQ 193
+ + + + + SQ+ S Q
Sbjct: 1922 QSQSQSQSQSQSQSQSQSQSQSQSQSPSQ 1950
>ref|NP_181532.2| nuclear RNA polymerase D1B [Arabidopsis thaliana]
gi|75320513|sp|Q5D869.1|NRPE1_ARATH RecName:
Full=DNA-directed RNA polymerase V subunit 1; AltName:
Full=DNA-directed RNA polymerase D subunit 1b;
Short=AtNRPD1b; Short=Nuclear RNA polymerase D 1b;
AltName: Full=DNA-directed RNA polymerase E subunit 1;
Short=Nuclear RNA polymerase E 1; AltName: Full=Protein
DEFECTIVE IN MERISTEM SILENCING 5; AltName: Full=Protein
DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3; AltName:
Full=Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1;
AltName: Full=RNA polymerase IV subunit 1; Short=POL IV 1
gi|59939210|gb|AAX12373.1| DNA-directed RNA polymerase
alpha subunit [Arabidopsis thaliana]
gi|62822917|gb|AAY15198.1| DNA-dependent RNA polymerase
large subunit [Arabidopsis thaliana]
gi|330254673|gb|AEC09767.1| nuclear RNA polymerase D1B
[Arabidopsis thaliana]
Length = 1976
Score = 157 bits (396), Expect = 6e-36
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Frame = -1
Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
++E +M+ +R+IMH + Y DGD + DD+T++++ + N+HP K K G+G+D+ITV +H+
Sbjct: 1742 DVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHT 1801
Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
F DSRCF+ VS DG DFSYRK L N+L +KYP++AE FI KYF KP+P +R+ Q
Sbjct: 1802 IFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPRPSGNRDRNNQ 1861
Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPG---PQSEAGAPRGWNTDGVAQTPIQQSEAG 280
PP E P + GG + QT Q+ A +P +QT Q
Sbjct: 1862 DATPPGEEQSQPPNQSIGNGGDDFQTQTQSQSPSQTRAQSPSQAQAQSPSQTQSQSQSQS 1921
Query: 279 TPSGWDSASTPAADEGGTPWGSQADSGPQ 193
+ + + + + SQ+ S Q
Sbjct: 1922 QSQSQSQSQSQSQSQSQSQSQSQSQSPSQ 1950