BLASTX nr result

ID: Mentha29_contig00019547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00019547
         (810 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...   214   2e-53
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              171   2e-40
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   171   2e-40
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   169   9e-40
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas...   167   6e-39
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   166   7e-39
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   165   2e-38
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   165   2e-38
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   164   3e-38
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   164   3e-38
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   163   8e-38
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218...   161   2e-37
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   161   2e-37
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   160   4e-37
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   159   1e-36
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi...   159   1e-36
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   158   3e-36
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   158   3e-36
gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis th...   157   6e-36
ref|NP_181532.2| nuclear RNA polymerase D1B [Arabidopsis thalian...   157   6e-36

>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score =  214 bits (546), Expect = 2e-53
 Identities = 110/192 (57%), Positives = 132/192 (68%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            E E++MKNIRR+MHQTGY DGD L ADDQ YIVDNV N+HP+K++K GAGLD+I V +HS
Sbjct: 1929 ETETIMKNIRRVMHQTGYNDGDPLSADDQKYIVDNVLNHHPEKSLKIGAGLDHIMVNKHS 1988

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
            EFQ SRC Y V++DG  ADFSYRKCL+NF++ KYP+ AESFI KYFKKPQPR GWN + +
Sbjct: 1989 EFQMSRCLYAVTIDGSKADFSYRKCLDNFIRGKYPDVAESFIAKYFKKPQPRTGWNNNSK 2048

Query: 450  GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTDGVAQTPIQQSEAGTPS 271
               PPR EAGTP  WN +         TP P  ++G P GWN     +TP  Q    TP 
Sbjct: 2049 -DRPPRSEAGTP-NWNRD--------STPAPPEDSGTP-GWN--NTDRTP-GQDNVSTPD 2094

Query: 270  GWDSASTPAADE 235
               S+   A DE
Sbjct: 2095 WNKSSQFSATDE 2106


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  171 bits (434), Expect = 2e-40
 Identities = 81/137 (59%), Positives = 98/137 (71%), Gaps = 10/137 (7%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            ++E +M++IRRIMHQ GY DGD L ADDQ+YI+D VFN HPDKAVK G G+DY+ V RHS
Sbjct: 1749 DVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMVSRHS 1808

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQ---------- 481
             F +SRCFY VS DG   DFSYRKCLENF+KEKYP+ AE+FI KYF++P+          
Sbjct: 1809 SFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRERSVI 1868

Query: 480  PRPGWNRDQQGPPPPRG 430
            P  G NR+Q   P   G
Sbjct: 1869 PEDGGNREQSVVPEETG 1885


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  171 bits (434), Expect = 2e-40
 Identities = 81/137 (59%), Positives = 98/137 (71%), Gaps = 10/137 (7%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            ++E +M++IRRIMHQ GY DGD L ADDQ+YI+D VFN HPDKAVK G G+DY+ V RHS
Sbjct: 1689 DVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMVSRHS 1748

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQ---------- 481
             F +SRCFY VS DG   DFSYRKCLENF+KEKYP+ AE+FI KYF++P+          
Sbjct: 1749 SFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRERSVI 1808

Query: 480  PRPGWNRDQQGPPPPRG 430
            P  G NR+Q   P   G
Sbjct: 1809 PEDGGNREQSVVPEETG 1825


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  169 bits (429), Expect = 9e-40
 Identities = 80/127 (62%), Positives = 96/127 (75%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            +IE LM +IRRIMHQTGY DGD L ADDQ+Y++DNVF+YHPDKAVK GAG+D++TV RHS
Sbjct: 1793 DIEPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNVFHYHPDKAVKMGAGIDHVTVSRHS 1852

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             FQ+SRCFY VS DG   DFSYRKCLENF+K KYP+ A+ FI KYF +         ++Q
Sbjct: 1853 NFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFAR-------RGNRQ 1905

Query: 450  GPPPPRG 430
              P P G
Sbjct: 1906 RTPAPEG 1912


>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
            gi|561006762|gb|ESW05756.1| hypothetical protein
            PHAVU_011G206900g [Phaseolus vulgaris]
          Length = 2052

 Score =  167 bits (422), Expect = 6e-39
 Identities = 82/151 (54%), Positives = 103/151 (68%), Gaps = 3/151 (1%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            EIE +M++IRRIM Q GY DGD L ADDQ ++++NVF +HPDK  K GAG+DY+ V +HS
Sbjct: 1904 EIEPIMQSIRRIMQQQGYNDGDPLAADDQLFVLENVFEHHPDKDTKMGAGIDYVMVNKHS 1963

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPR---PGWNR 460
             FQDSRCFY V  DG   DFSYRKCL+N++++KYPE AESF  KYF+KP+ R       R
Sbjct: 1964 SFQDSRCFYVVLKDGRREDFSYRKCLDNWIRKKYPELAESFFGKYFRKPRNRAEQTATPR 2023

Query: 459  DQQGPPPPRGEAGTPRGWNGEEGGTPWGAQT 367
              Q   PPR EA TP     ++  TP   +T
Sbjct: 2024 GDQTAMPPRDEAATP----ADQTSTPGPVET 2050


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  166 bits (421), Expect = 7e-39
 Identities = 75/125 (60%), Positives = 96/125 (76%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            ++E +M++IRRIMHQ+GY DGDRL ADD+++I DNVFNYHPDKA+K GAG+D+  V +H 
Sbjct: 1737 DVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGAGIDHFKVDKHG 1796

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             FQDSRC + VS DG   DFSYRKCLE+F++ KYPE  + FI KYF++  PR G NR+  
Sbjct: 1797 SFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPEFVDEFIGKYFRR--PRSGGNREPS 1854

Query: 450  GPPPP 436
             PP P
Sbjct: 1855 LPPVP 1859


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  165 bits (418), Expect = 2e-38
 Identities = 74/141 (52%), Positives = 95/141 (67%), Gaps = 10/141 (7%)
 Frame = -1

Query: 807  IESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHSE 628
            IE  MK+IRRIMH++GY DGD +  +DQ++I+DNVFNYHPDKA K G+G+D++ + RHS 
Sbjct: 1904 IEPTMKSIRRIMHKSGYNDGDPIRPEDQSFIIDNVFNYHPDKAAKMGSGIDHLMISRHSS 1963

Query: 627  FQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQ----------P 478
            FQDSRC Y VS DG   DFSYRKCL N +K ++P+ A+ F+ KYF+KP+          P
Sbjct: 1964 FQDSRCLYVVSTDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYFRKPKPGGNQDRISTP 2023

Query: 477  RPGWNRDQQGPPPPRGEAGTP 415
             P WN  Q   P P G    P
Sbjct: 2024 EPAWNNTQAPTPEPSGNTMAP 2044


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  165 bits (417), Expect = 2e-38
 Identities = 74/124 (59%), Positives = 95/124 (76%)
 Frame = -1

Query: 807  IESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHSE 628
            +E +M++IRRIMHQ+GY DGDRL ADD+++I DNVFNYHPDKA+K GAG+D+  V +H  
Sbjct: 1736 VEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGAGIDHFKVDKHGS 1795

Query: 627  FQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQG 448
            FQDSRC + VS DG   DFSYRKCLE+F++ KYP+  + FI KYF++  PR G NR+   
Sbjct: 1796 FQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPDLVDEFIGKYFRR--PRSGGNREPSL 1853

Query: 447  PPPP 436
            PP P
Sbjct: 1854 PPVP 1857


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  164 bits (416), Expect = 3e-38
 Identities = 79/152 (51%), Positives = 104/152 (68%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            +IE +M++IR++MHQ+GY DGD L A+DQ++++ +VFN+HPDKA K GAG+D+  V RHS
Sbjct: 1814 DIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHS 1873

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             FQ+SRCFY V+ DG   DFSYRKCL+NF+K KYP+ AE F+ KYF+K  PRP  NRD+ 
Sbjct: 1874 SFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRK--PRPNRNRDRN 1931

Query: 450  GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQ 355
                P  E    +   GE    P  AQ    Q
Sbjct: 1932 ----PASEENENKSIGGELTPIPEEAQNGSQQ 1959


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  164 bits (416), Expect = 3e-38
 Identities = 79/152 (51%), Positives = 104/152 (68%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            +IE +M++IR++MHQ+GY DGD L A+DQ++++ +VFN+HPDKA K GAG+D+  V RHS
Sbjct: 1874 DIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHS 1933

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             FQ+SRCFY V+ DG   DFSYRKCL+NF+K KYP+ AE F+ KYF+K  PRP  NRD+ 
Sbjct: 1934 SFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRK--PRPNRNRDRN 1991

Query: 450  GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQ 355
                P  E    +   GE    P  AQ    Q
Sbjct: 1992 ----PASEENENKSIGGELTPIPEEAQNGSQQ 2019


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  163 bits (412), Expect = 8e-38
 Identities = 79/164 (48%), Positives = 104/164 (63%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            +IE +M++IRRIM Q GY DGD L A+DQ ++++NVF +HPDK  K G G+DY+ V +HS
Sbjct: 1927 DIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHS 1986

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             FQ+SRCFY V  DG   DFSYRKCL N++ +KYP+ AESF+ KYF+KP+      R  Q
Sbjct: 1987 SFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRA-----RGDQ 2041

Query: 450  GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTD 319
               P R EA TP    GE+  TP   +   P  +   P    T+
Sbjct: 2042 TATPGRDEAATP----GEQTATPGRDEAATPAEQISTPTPMETN 2081


>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1|
           Protein DCL [Medicago truncatula]
          Length = 481

 Score =  161 bits (408), Expect = 2e-37
 Identities = 92/196 (46%), Positives = 114/196 (58%)
 Frame = -1

Query: 810 EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
           +IE ++++IRRIM   GY DGD L  +DQ Y+++NVF +HPDK  K G G+D++ V +HS
Sbjct: 299 DIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHS 358

Query: 630 EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
            FQDSRC Y V  DG   DFSYRKCLEN +++KYPE AESF  KYF+KPQPR    RDQ 
Sbjct: 359 NFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRV--KRDQ- 415

Query: 450 GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTDGVAQTPIQQSEAGTPS 271
             P P GE        GE+   P      G Q+    P G  T     TP   +E  TP 
Sbjct: 416 -TPNPAGEQTAAPNPAGEQTAAP---NPAGEQTATQNPPGEQT----STP-NPAEEQTP- 465

Query: 270 GWDSASTPAADEGGTP 223
                 TPA D+  TP
Sbjct: 466 ------TPAGDQTSTP 475


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  161 bits (408), Expect = 2e-37
 Identities = 92/196 (46%), Positives = 114/196 (58%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            +IE ++++IRRIM   GY DGD L  +DQ Y+++NVF +HPDK  K G G+D++ V +HS
Sbjct: 1850 DIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHS 1909

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             FQDSRC Y V  DG   DFSYRKCLEN +++KYPE AESF  KYF+KPQPR    RDQ 
Sbjct: 1910 NFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRV--KRDQ- 1966

Query: 450  GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTDGVAQTPIQQSEAGTPS 271
              P P GE        GE+   P      G Q+    P G  T     TP   +E  TP 
Sbjct: 1967 -TPNPAGEQTAAPNPAGEQTAAP---NPAGEQTATQNPPGEQT----STP-NPAEEQTP- 2016

Query: 270  GWDSASTPAADEGGTP 223
                  TPA D+  TP
Sbjct: 2017 ------TPAGDQTSTP 2026


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  160 bits (406), Expect = 4e-37
 Identities = 76/131 (58%), Positives = 94/131 (71%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            E+ESLM++IRRIMHQ+G  DG+ L  DDQTY++DN+ NYHPDKA K GAG+D+ITV++HS
Sbjct: 1760 EVESLMQSIRRIMHQSGCVDGEPLLPDDQTYLIDNILNYHPDKAAKIGAGVDFITVKKHS 1819

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             FQ+SRCFY VS DG   DFSY KC+E F+K KYP  AESF  KYF++ Q      R Q 
Sbjct: 1820 NFQESRCFYVVSTDGKDTDFSYIKCIETFVKGKYPSVAESFTSKYFRRSQ------RPQP 1873

Query: 450  GPPPPRGEAGT 418
              P P   + T
Sbjct: 1874 ASPSPASPSPT 1884


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  159 bits (402), Expect = 1e-36
 Identities = 67/107 (62%), Positives = 88/107 (82%)
 Frame = -1

Query: 807  IESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHSE 628
            IE +M+++RRIMHQ+GY DGD L  DDQ++++DNVFNYHPDKA K G G+D++TV RH  
Sbjct: 1718 IEPVMRSLRRIMHQSGYNDGDPLSGDDQSFVLDNVFNYHPDKAAKMGCGIDHLTVNRHGS 1777

Query: 627  FQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKK 487
            FQDSRCF+ VS DG   DFSYRKCL+N+++EK+P+ AE+FI KYF +
Sbjct: 1778 FQDSRCFFVVSTDGRTEDFSYRKCLDNYIREKFPDLAETFIGKYFSR 1824


>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
            NRPD1b [Arabidopsis lyrata subsp. lyrata]
          Length = 1947

 Score =  159 bits (402), Expect = 1e-36
 Identities = 84/208 (40%), Positives = 124/208 (59%), Gaps = 2/208 (0%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            ++E +M+ +R+IMH + Y DGD +  DD+T++++ + N+HP K  K G+G+D+ITV +H+
Sbjct: 1742 DVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHT 1801

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             F DSRCF+ VS DG   DFSYRK L N+L  KYP++AE FI KYF KP+P    +R+ Q
Sbjct: 1802 IFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMMKYPDRAEEFIDKYFTKPRPSGNRDRNNQ 1861

Query: 450  GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGP-QSEAGAPRGWNTDGVAQTPIQ-QSEAGT 277
               PP  E   P   +   GG  +  QT  P Q++A A         AQ+P Q Q+++ +
Sbjct: 1862 DATPPGEEQSQPPTQSIGNGGDDFNTQTQSPSQTQAQA----QAQAQAQSPSQTQTQSPS 1917

Query: 276  PSGWDSASTPAADEGGTPWGSQADSGPQ 193
            PS   + S P+  +      SQ+ S  Q
Sbjct: 1918 PSQTQTQS-PSQTQAQAQSPSQSPSQTQ 1944


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  158 bits (399), Expect = 3e-36
 Identities = 69/110 (62%), Positives = 90/110 (81%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            ++E LM++IR+IMHQ+GY DGD L A DQ++I++NVF +HPDKA+K GAG+DY+ V +HS
Sbjct: 1659 DVEPLMQSIRKIMHQSGYNDGDPLSALDQSFILENVFTHHPDKAIKMGAGVDYVMVSKHS 1718

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQ 481
             F DSRCFY VS DG   DFSYRKCL+NF+K KYP+ A+ FI KYF+KP+
Sbjct: 1719 NFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGKYPDMADVFIAKYFRKPR 1768


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  158 bits (399), Expect = 3e-36
 Identities = 85/171 (49%), Positives = 108/171 (63%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            +IE ++++IRRIM Q GY DGD L A+DQ Y+++NVF +HPDK  K G G+D++ V RHS
Sbjct: 2085 DIEPIVQSIRRIMQQQGYNDGDPLAAEDQQYVLENVFEHHPDKETKMGVGIDHVMVSRHS 2144

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             FQ+SRCFY V  DG   DFSYRKCLE+F+++KY + AESF  KYF+KP+P+    RDQ 
Sbjct: 2145 NFQESRCFYVVLKDGKKEDFSYRKCLESFVRKKYADTAESFCGKYFRKPRPK----RDQI 2200

Query: 450  GPPPPRGEAGTPRGWNGEEGGTPWGAQTPGPQSEAGAPRGWNTDGVAQTPI 298
                  GE     G  GE+  TP G QT  P    G      T G  QT I
Sbjct: 2201 A--NSGGEQTANPG--GEQTATPGGEQTTTP--NGGEQTATPTPGGEQTTI 2245


>gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis thaliana]
          Length = 1976

 Score =  157 bits (396), Expect = 6e-36
 Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            ++E +M+ +R+IMH + Y DGD +  DD+T++++ + N+HP K  K G+G+D+ITV +H+
Sbjct: 1742 DVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHT 1801

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             F DSRCF+ VS DG   DFSYRK L N+L +KYP++AE FI KYF KP+P    +R+ Q
Sbjct: 1802 IFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPRPSGNRDRNNQ 1861

Query: 450  GPPPPRGEAGTPRGWNGEEGGTPWGAQTPG---PQSEAGAPRGWNTDGVAQTPIQQSEAG 280
               PP  E   P   +   GG  +  QT      Q+ A +P        +QT  Q     
Sbjct: 1862 DATPPGEEQSQPPNQSIGNGGDDFQTQTQSQSPSQTRAQSPSQAQAQSPSQTQSQSQSQS 1921

Query: 279  TPSGWDSASTPAADEGGTPWGSQADSGPQ 193
                   + + +  +  +   SQ+ S  Q
Sbjct: 1922 QSQSQSQSQSQSQSQSQSQSQSQSQSPSQ 1950


>ref|NP_181532.2| nuclear RNA polymerase D1B [Arabidopsis thaliana]
            gi|75320513|sp|Q5D869.1|NRPE1_ARATH RecName:
            Full=DNA-directed RNA polymerase V subunit 1; AltName:
            Full=DNA-directed RNA polymerase D subunit 1b;
            Short=AtNRPD1b; Short=Nuclear RNA polymerase D 1b;
            AltName: Full=DNA-directed RNA polymerase E subunit 1;
            Short=Nuclear RNA polymerase E 1; AltName: Full=Protein
            DEFECTIVE IN MERISTEM SILENCING 5; AltName: Full=Protein
            DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3; AltName:
            Full=Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1;
            AltName: Full=RNA polymerase IV subunit 1; Short=POL IV 1
            gi|59939210|gb|AAX12373.1| DNA-directed RNA polymerase
            alpha subunit [Arabidopsis thaliana]
            gi|62822917|gb|AAY15198.1| DNA-dependent RNA polymerase
            large subunit [Arabidopsis thaliana]
            gi|330254673|gb|AEC09767.1| nuclear RNA polymerase D1B
            [Arabidopsis thaliana]
          Length = 1976

 Score =  157 bits (396), Expect = 6e-36
 Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
 Frame = -1

Query: 810  EIESLMKNIRRIMHQTGYTDGDRLPADDQTYIVDNVFNYHPDKAVKAGAGLDYITVRRHS 631
            ++E +M+ +R+IMH + Y DGD +  DD+T++++ + N+HP K  K G+G+D+ITV +H+
Sbjct: 1742 DVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHT 1801

Query: 630  EFQDSRCFYTVSVDGVLADFSYRKCLENFLKEKYPEKAESFIPKYFKKPQPRPGWNRDQQ 451
             F DSRCF+ VS DG   DFSYRK L N+L +KYP++AE FI KYF KP+P    +R+ Q
Sbjct: 1802 IFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPRPSGNRDRNNQ 1861

Query: 450  GPPPPRGEAGTPRGWNGEEGGTPWGAQTPG---PQSEAGAPRGWNTDGVAQTPIQQSEAG 280
               PP  E   P   +   GG  +  QT      Q+ A +P        +QT  Q     
Sbjct: 1862 DATPPGEEQSQPPNQSIGNGGDDFQTQTQSQSPSQTRAQSPSQAQAQSPSQTQSQSQSQS 1921

Query: 279  TPSGWDSASTPAADEGGTPWGSQADSGPQ 193
                   + + +  +  +   SQ+ S  Q
Sbjct: 1922 QSQSQSQSQSQSQSQSQSQSQSQSQSPSQ 1950


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