BLASTX nr result
ID: Mentha29_contig00019286
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha29_contig00019286 (3657 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus... 1490 0.0 ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1417 0.0 ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1415 0.0 sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 1395 0.0 sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1389 0.0 gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea] 1365 0.0 ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun... 1319 0.0 ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1304 0.0 ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1296 0.0 ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1290 0.0 ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof... 1289 0.0 ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1287 0.0 ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 1284 0.0 ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu... 1276 0.0 ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1266 0.0 ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr... 1256 0.0 emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea] 1255 0.0 ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof... 1250 0.0 emb|CBI36559.3| unnamed protein product [Vitis vinifera] 1232 0.0 ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps... 1224 0.0 >gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus] Length = 941 Score = 1490 bits (3858), Expect = 0.0 Identities = 739/934 (79%), Positives = 809/934 (86%), Gaps = 1/934 (0%) Frame = +2 Query: 278 FPQTLKXXXXXXXXXXXXXXVSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFI 457 FPQ LK VSD++D N+ GN + ++ LQ ES RVFI Sbjct: 20 FPQNLKLPSLHNPALLLPPPVSDSSDDNFRGNLDKVATLQ------------ESKDRVFI 67 Query: 458 RDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXX 637 +DPPWIS+LFMKNLLFRS+ G+K+EFQEMERRKYY LRRRQVKAETEAW+N V Sbjct: 68 QDPPWISSLFMKNLLFRSRNRGGVKIEFQEMERRKYYLLRRRQVKAETEAWENKVEEYRE 127 Query: 638 XXXXXXXXKLAPNLPYFKKLMLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPADKI 817 KLAPNLPY KKL+LGWF+P REAIEKEQN +RS+KNKAAFAPFIDALPADK+ Sbjct: 128 LEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNTQRSKKNKAAFAPFIDALPADKM 187 Query: 818 AIIVMHKLMSLLMMGGKEAKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEG 997 A+IVMHK+M LLMMGGKE + VRVVEAAVQIGVA+E EVRI +FL+K K ++K+E+ E Sbjct: 188 AVIVMHKMMGLLMMGGKEDRCVRVVEAAVQIGVAVENEVRIHSFLEKMKKNEKREIGDES 247 Query: 998 EEDSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAY 1177 + DSS E I+R+RVK LIKRNRV EV KL+RSEEF+SWGRD QAKLGCCL+ELLTQSAY Sbjct: 248 QVDSSNEAVIMRKRVKSLIKRNRVIEVHKLVRSEEFKSWGRDIQAKLGCCLIELLTQSAY 307 Query: 1178 VQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMII 1357 VQPP++Q+ADSPPDVRPAFRHIFKIA R PGQ+IVK+YG IECDPLVL GLDKTV+HMII Sbjct: 308 VQPPVNQSADSPPDVRPAFRHIFKIATRLPGQTIVKRYGVIECDPLVLAGLDKTVKHMII 367 Query: 1358 PYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGN 1537 PYVPMLVPPK+WKGYD+GGYLFLPSYLMRTHGSR QQDAV+ V KQMQKVYEALDTLGN Sbjct: 368 PYVPMLVPPKKWKGYDRGGYLFLPSYLMRTHGSRHQQDAVKTVTSKQMQKVYEALDTLGN 427 Query: 1538 TKWRVNRRILNVVENLWAAGGDIAGLVNRKNVPIPELL-SDDEKEIXXXXXXXXXXXXIN 1714 TKWRVN+RIL VVEN+WAAGG+IAGLVNR+++PIPELL S+D KE IN Sbjct: 428 TKWRVNKRILTVVENIWAAGGNIAGLVNREDIPIPELLLSEDMKEAKKWKWSVRKVKKIN 487 Query: 1715 QERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA 1894 QERHSQRCD ELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA Sbjct: 488 QERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 547 Query: 1895 DGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLK 2074 +GRPLGKSGLRWLKIH+ANLYGGGVEKLSYD RV+FVENNI+EI DSADNSLNGNRWWLK Sbjct: 548 EGRPLGKSGLRWLKIHVANLYGGGVEKLSYDDRVAFVENNISEIFDSADNSLNGNRWWLK 607 Query: 2075 AEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLV 2254 AEDPFQCLAACINL EALKS SPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLV Sbjct: 608 AEDPFQCLAACINLVEALKSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLV 667 Query: 2255 AGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGV 2434 AGD+PSDVYSEIAERVH IMKRDSEKDPETD +AL+AK+LIGQVDRKLVKQTVMTSVYGV Sbjct: 668 AGDKPSDVYSEIAERVHNIMKRDSEKDPETDRHALIAKVLIGQVDRKLVKQTVMTSVYGV 727 Query: 2435 TYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKI 2614 TYVGAREQIKRRLEEKGLI+DDKLLFSA+CYAA+VT+AAL ELFQAARAIM WLGDCAKI Sbjct: 728 TYVGAREQIKRRLEEKGLITDDKLLFSAACYAAKVTLAALGELFQAARAIMAWLGDCAKI 787 Query: 2615 IGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFV 2794 I EN PVRWTTPLGLPVVQPYFKSQRHVI+TSLQVLALQREGD VEVRKQRTAFPPNFV Sbjct: 788 IASENEPVRWTTPLGLPVVQPYFKSQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFV 847 Query: 2795 HSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLL 2974 HSLDG+HMMMTAIACR+AGLRFAGVHDSFWTHACDVDRMNQILRQKFV+LYSMP+LENLL Sbjct: 848 HSLDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYSMPILENLL 907 Query: 2975 ESFQXXXXXXXXXXXXERGDFDLEKVLESPYFFN 3076 ESF+ RGDF LE+V+ESPYFFN Sbjct: 908 ESFETSYPTLKFPPLPNRGDFLLEQVIESPYFFN 941 >ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum tuberosum] Length = 1015 Score = 1417 bits (3667), Expect = 0.0 Identities = 698/977 (71%), Positives = 805/977 (82%), Gaps = 1/977 (0%) Frame = +2 Query: 149 SSGAQFYQSPPPWKPRKKLSFIXXXXXXXXXXXXXXXXXXXXXFPQTLKXXXXXXXXXXX 328 +S A + SPP + RK FP+TLK Sbjct: 39 ASSASYSPSPPSSQWRKTQKSQKNCFLYGIHSQEFLKLSQTSSFPKTLKLPVIQLPITVH 98 Query: 329 XXXVSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFR 508 V +TD N T N E + NLQ IPNG+P L ES RVFI+DPPW+S+LFM +L R Sbjct: 99 SEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKRVFIQDPPWVSSLFMNSLFVR 158 Query: 509 SKKSSGIKLEFQEMERRKYYS-LRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPY 685 +K+ G++ EF+E+ERR+ Y+ LRRRQ+KAETEAW+ MV KLAPNLPY Sbjct: 159 AKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPY 218 Query: 686 FKKLMLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGG 865 KKL+LGWF+P R+AIEKEQN +QK++ A+AP ID+LPADK+A+IVMHKLM LLMMGG Sbjct: 219 VKKLLLGWFEPLRQAIEKEQNAEMTQKHRTAYAPHIDSLPADKMAVIVMHKLMGLLMMGG 278 Query: 866 KEAKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVK 1045 KE + V+VV+AAVQIG+A+E EVRI NF++K K QK A+G+ED S+E ILR+RVK Sbjct: 279 KEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKKHQKHMSGAQGQEDMSRETMILRKRVK 338 Query: 1046 RLIKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVR 1225 LIKRNRV EV+KL++SEE ESWGRDTQAKLGC LLELLT++AYVQPP+DQ+AD+PPD+R Sbjct: 339 SLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIR 398 Query: 1226 PAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYD 1405 PAFRH+F+IA R+PG++IVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYD Sbjct: 399 PAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKKWRGYD 458 Query: 1406 KGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENL 1585 KGGYLFLPSYLMRTHGSRRQQDAVR+VP KQMQ+VYEALDTLG+TKWRVN+RIL+VVE++ Sbjct: 459 KGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVESI 518 Query: 1586 WAAGGDIAGLVNRKNVPIPELLSDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVA 1765 WA GG+IAGLV+RK+VPIPEL SDD E+ INQE HSQRCD ELKLSVA Sbjct: 519 WAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQELHSQRCDTELKLSVA 578 Query: 1766 RNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHL 1945 R +KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLK+HL Sbjct: 579 RKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHL 638 Query: 1946 ANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEA 2125 A+LY GG+EKL YDAR++FVEN+I +ILDSA N LNGNRWWL AEDP QCLAACINLSEA Sbjct: 639 ASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEA 698 Query: 2126 LKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVH 2305 LKS SPHTVISHLPIHQDGSCNGLQHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV Sbjct: 699 LKSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVD 758 Query: 2306 IIMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG 2485 I++ DS KDP TDPNALLAKLLI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG Sbjct: 759 HIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG 818 Query: 2486 LISDDKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLP 2665 LI DD+LLF+ASCYAA+VT+AAL ELFQAAR M WLGDCAK+I EN PVRWTTPLGLP Sbjct: 819 LIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLP 878 Query: 2666 VVQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRN 2845 VVQPYFK+QRHVI+TSLQVLALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+ Sbjct: 879 VVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRD 938 Query: 2846 AGLRFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXE 3025 AGL FAGVHDSFWTHACDVD+MN+ILR+KFVELYSMP+LE+LLESFQ + Sbjct: 939 AGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQESYPALTFPPLPK 998 Query: 3026 RGDFDLEKVLESPYFFN 3076 RGDFDL++VLESPYFFN Sbjct: 999 RGDFDLQEVLESPYFFN 1015 >ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum lycopersicum] Length = 1007 Score = 1415 bits (3663), Expect = 0.0 Identities = 690/934 (73%), Positives = 793/934 (84%), Gaps = 1/934 (0%) Frame = +2 Query: 278 FPQTLKXXXXXXXXXXXXXXVSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFI 457 FP+TLK V +TD N T N E + NLQ IPNG+P L ES RVFI Sbjct: 74 FPKTLKLPIIQLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKRVFI 133 Query: 458 RDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKYYS-LRRRQVKAETEAWQNMVXXXX 634 +DPPW+S+LFM NL R+K+ G++ EF+E+ERR+ Y+ LRRRQ+KAETEAW+ MV Sbjct: 134 QDPPWVSSLFMNNLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYR 193 Query: 635 XXXXXXXXXKLAPNLPYFKKLMLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPADK 814 KLAPNLPY KKLMLGWF+P R+AIE+EQN +QK++ A+AP ID+LPADK Sbjct: 194 ELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEMTQKHRTAYAPHIDSLPADK 253 Query: 815 IAIIVMHKLMSLLMMGGKEAKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAE 994 +A+IVMHKLM LLMMGGKE + V+VV+AAVQIG+A+E EVRI NF++K K QK A+ Sbjct: 254 MAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKKHQKHMTGAQ 313 Query: 995 GEEDSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSA 1174 G+ED S+E ILR+RVK LIKRNRV EV+KL++SEE ESWGRDTQAKLGC LLELLT++A Sbjct: 314 GQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCRLLELLTETA 373 Query: 1175 YVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMI 1354 YVQPP+DQ+AD+PPD+RPAFRH+F+IA R+PG++IVKKYG IECDPLV+ G+D+TV+ M+ Sbjct: 374 YVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMM 433 Query: 1355 IPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLG 1534 IPYVPMLVPPK+W+GYDKGGYLFLPSYLMRTHGSRRQQDAVR+VP KQMQ+VYEALDTLG Sbjct: 434 IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLG 493 Query: 1535 NTKWRVNRRILNVVENLWAAGGDIAGLVNRKNVPIPELLSDDEKEIXXXXXXXXXXXXIN 1714 +TKWRVN+RIL+VVE +WA GG+IAGLV+RK+VPIPEL SDD E+ IN Sbjct: 494 STKWRVNKRILSVVETIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKIN 553 Query: 1715 QERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA 1894 QE HSQRCD ELKLSVAR ++DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA Sbjct: 554 QELHSQRCDTELKLSVARKLRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA 613 Query: 1895 DGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLK 2074 +GRPLGKSGLRWLK+HLA+LY GG+EKL YDAR++FVEN+I +ILDSA N LNGNRWWL Sbjct: 614 EGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLN 673 Query: 2075 AEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLV 2254 AEDP QCLAACINLSEA+KS SPHTVISHLPIHQDGSCNGLQHYAALGRDS EAAAVNLV Sbjct: 674 AEDPLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLV 733 Query: 2255 AGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGV 2434 AG++P+DVY+EIA RV I++ DS KDP TDPNALLAKLLI QVDRKLVKQTVMTSVYGV Sbjct: 734 AGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGV 793 Query: 2435 TYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKI 2614 TYVGAREQIKRRLEEKGLI DD+LLF+ASCYAA+VT+AAL ELFQAAR M WLGDCAK+ Sbjct: 794 TYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKV 853 Query: 2615 IGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFV 2794 I EN PVRWTTPLGLPVVQPYFK+QRHVI+TSLQVLALQREGD VEVRKQRTAFPPNFV Sbjct: 854 IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPPNFV 913 Query: 2795 HSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLL 2974 HSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD+MN+ILR+KFVELYSMP+LE+LL Sbjct: 914 HSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLL 973 Query: 2975 ESFQXXXXXXXXXXXXERGDFDLEKVLESPYFFN 3076 ESFQ +RGDFDL +VLESPYFFN Sbjct: 974 ESFQESYPALTFPPLPKRGDFDLREVLESPYFFN 1007 >sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName: Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3; Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName: Full=DNA-directed RNA polymerase 3A, chloroplastic; AltName: Full=NictaRpoT3-syl; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3A; Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type RNA polymerase [Nicotiana sylvestris] gi|21425679|emb|CAC95027.2| plastid RNA polymerase [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] Length = 977 Score = 1395 bits (3611), Expect = 0.0 Identities = 684/903 (75%), Positives = 782/903 (86%), Gaps = 1/903 (0%) Frame = +2 Query: 371 NAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEM 550 N E + NLQ I NG +K ES RVFI+DPPW+S+LFM +L R+K+ G++ EF+E+ Sbjct: 78 NLEELVNLQKIANGVLTK---ESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREI 134 Query: 551 ERRKYYS-LRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKLMLGWFQPFRE 727 ERR+ Y+ LRRRQ+KAETEAW+ MV KLAPNLPY KKL+LGWF+P R+ Sbjct: 135 ERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQ 194 Query: 728 AIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAKSVRVVEAAVQ 907 AIEKEQN + K++AAFAP ID+LPADK+A+IVMHKLM LLMMGGKE + V+VV+AAVQ Sbjct: 195 AIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQ 254 Query: 908 IGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKRNRVAEVQKL 1087 IG+A+E EVRI NFL+K K QK A+ +ED S+E ILR+RVK LIKRNRV EV+KL Sbjct: 255 IGMAVENEVRIHNFLEKTKKLQKHMTGAQSQEDMSRETMILRKRVKSLIKRNRVVEVRKL 314 Query: 1088 LRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREP 1267 ++SEE ESWGRDTQAKLGC LLELLT++AYVQPP+DQ+AD+PPD+RPAFRH+F+IA R+P Sbjct: 315 MKSEEPESWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDP 374 Query: 1268 GQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRT 1447 G+SIVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGGYLFLPSYLMRT Sbjct: 375 GKSIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRT 434 Query: 1448 HGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDIAGLVNRK 1627 HGSRRQQDAVR+VP KQMQ+VYEALDTLG+TKWRVN+RIL+VVE++WA GG+IAGLV+RK Sbjct: 435 HGSRRQQDAVRSVPTKQMQQVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRK 494 Query: 1628 NVPIPELLSDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVARNMKDEEGFYYPHN 1807 +VPIPEL SDD E+ INQE HSQRCD ELKLSVAR +KDEEGFYYPHN Sbjct: 495 DVPIPELHSDDIMEVKKWKWRVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHN 554 Query: 1808 LDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYD 1987 LDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GG+EKL YD Sbjct: 555 LDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYD 614 Query: 1988 ARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLP 2167 AR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTV SHLP Sbjct: 615 ARLAFVENHIDDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLP 674 Query: 2168 IHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETD 2347 IHQDGSCNGLQHYAALGRDS EAAAVNLVAGD+P+DVY+EIA RV I++ DS KDP TD Sbjct: 675 IHQDGSCNGLQHYAALGRDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATD 734 Query: 2348 PNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCY 2527 PNALLAKLLI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASCY Sbjct: 735 PNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCY 794 Query: 2528 AARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIK 2707 AA+VT+AAL ELFQAAR M WLGDCAK+I EN PVRWTTPLGLPVVQPYFK+QRHVI+ Sbjct: 795 AAKVTLAALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIR 854 Query: 2708 TSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWT 2887 TSLQVLALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL+FAGVHDSFWT Sbjct: 855 TSLQVLALQREGDTVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWT 914 Query: 2888 HACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXERGDFDLEKVLESPY 3067 HACDVD+MN+ILR+KFVELYSMP+LE+LLESFQ +RGDFDL +VLESPY Sbjct: 915 HACDVDQMNRILREKFVELYSMPILEDLLESFQNSYPALTFPPLPKRGDFDLVEVLESPY 974 Query: 3068 FFN 3076 FFN Sbjct: 975 FFN 977 >sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName: Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3B; Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase [Nicotiana tabacum] Length = 977 Score = 1389 bits (3596), Expect = 0.0 Identities = 683/904 (75%), Positives = 782/904 (86%), Gaps = 2/904 (0%) Frame = +2 Query: 371 NAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEM 550 N E + NLQ IPNGF +K ES RVFI+DPPW+S+LFM +L R+K+ G++ EF+E+ Sbjct: 77 NLEELVNLQKIPNGFLNK---ESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREI 133 Query: 551 ERRKYYS-LRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKLMLGWFQPFRE 727 ERR+ Y+ LRRRQ+KAETEAW+ MV KLAPNLPY KKL+LGWF+P R+ Sbjct: 134 ERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQ 193 Query: 728 AIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAKSVRVVEAAVQ 907 AIEKEQN + K++AAFAP ID+LPADK+A+IVMHKLM LLMMGGKE + V+VV+AAVQ Sbjct: 194 AIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQ 253 Query: 908 IGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKRNRVAEVQKL 1087 IG+A+E EVRI NFL+K K QK A+ +ED SKE ILR+RVK LIKRNRV EV+KL Sbjct: 254 IGMAVENEVRIHNFLEKTKKLQKHMTGAQSQEDMSKETMILRKRVKSLIKRNRVVEVRKL 313 Query: 1088 LRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREP 1267 ++SEE ESWGRDTQAKLGC LLELLT++AYVQ P+DQ+AD+PPD+RPAFRH+FKIA R+P Sbjct: 314 MKSEEPESWGRDTQAKLGCRLLELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRDP 373 Query: 1268 GQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRT 1447 G++IVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGGYLFLPSYLMRT Sbjct: 374 GKNIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRT 433 Query: 1448 HGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDIAGLVNRK 1627 HGSRRQQDAVR VP KQMQ+VYEALDTLG+TKWRVN+RILNVVE++WA GG+IAGLV+RK Sbjct: 434 HGSRRQQDAVRGVPTKQMQQVYEALDTLGSTKWRVNKRILNVVESIWAGGGNIAGLVDRK 493 Query: 1628 NVPIPELL-SDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVARNMKDEEGFYYPH 1804 +VPIPEL SDD E+ INQE HSQRCD ELKLSVAR +KDEEGFYYPH Sbjct: 494 DVPIPELSNSDDIMEVKKWKWKVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPH 553 Query: 1805 NLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSY 1984 NLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GGVEKL Y Sbjct: 554 NLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCY 613 Query: 1985 DARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHL 2164 DAR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTVISHL Sbjct: 614 DARLAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHL 673 Query: 2165 PIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPET 2344 PIHQDGSCNGLQHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV I++ DS KDP Sbjct: 674 PIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAI 733 Query: 2345 DPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASC 2524 DPNALLAKLLI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASC Sbjct: 734 DPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASC 793 Query: 2525 YAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVI 2704 YAA+VT+AAL ELFQAAR M WLGDCAK+I EN PVRWTTPLGLPVVQPYFK+QRHVI Sbjct: 794 YAAKVTLAALGELFQAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVI 853 Query: 2705 KTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFW 2884 +TSLQ+LALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL+FAGVHDSFW Sbjct: 854 RTSLQILALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFW 913 Query: 2885 THACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXERGDFDLEKVLESP 3064 THACDVD+MN+ILR+KFVELYS+P+LE+LLE+FQ +RGDF+L +VLESP Sbjct: 914 THACDVDQMNRILREKFVELYSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLESP 973 Query: 3065 YFFN 3076 YFFN Sbjct: 974 YFFN 977 >gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea] Length = 952 Score = 1365 bits (3534), Expect = 0.0 Identities = 663/935 (70%), Positives = 780/935 (83%), Gaps = 2/935 (0%) Frame = +2 Query: 278 FPQTLKXXXXXXXXXXXXXXVSDATDHNYTGNAENMSNLQVIPNG-FPSKLPSESGGRV- 451 FP+ +K VSD++D N+T N N++ + V PNG S+ E RV Sbjct: 19 FPRNVKLPSLHTPAPFLSHPVSDSSDDNFTENPGNLATMLVTPNGGISSEFSKELRDRVV 78 Query: 452 FIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXX 631 I+DPPWIS+L++K+LLFR++ +K+EF+EMER KYY LRRRQ+KAETEAW+NMV Sbjct: 79 IIQDPPWISSLYIKSLLFRNRNRCDVKIEFKEMERHKYYELRRRQIKAETEAWENMVKEY 138 Query: 632 XXXXXXXXXXKLAPNLPYFKKLMLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPAD 811 K+APNLPYFKKLMLGWF+P EAI EQ++++ +KN+ AFAP+ID+LP + Sbjct: 139 KELEKEMCEKKMAPNLPYFKKLMLGWFEPLTEAIRTEQSLQKPKKNRIAFAPYIDSLPPE 198 Query: 812 KIAIIVMHKLMSLLMMGGKEAKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVA 991 +A+IVMHK+M LLMMGGK+ + +RVVEAA+QIG AIEQEVRI FL+K K+ QK+ V + Sbjct: 199 SMAVIVMHKIMGLLMMGGKQDRCIRVVEAALQIGKAIEQEVRIHAFLEKTKH-QKEAVAS 257 Query: 992 EGEEDSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQS 1171 E +E+S ++ LR+RVK L++R R EVQKL++SE E W R+ QAKLGCCL+ LLTQS Sbjct: 258 ESQENSCEKAANLRKRVKNLVRRGRGVEVQKLVKSENHEPWTREIQAKLGCCLINLLTQS 317 Query: 1172 AYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHM 1351 AYVQPP+ Q+ADSPPDVRPAFRH FKIA REP Q++V++YG IECDPL+L G + V+HM Sbjct: 318 AYVQPPVSQSADSPPDVRPAFRHFFKIATREPRQTVVRRYGVIECDPLILDGFESNVKHM 377 Query: 1352 IIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTL 1531 ++P++PML+PPK+WKGYDKGGYLFLPSY+MRTHGSRRQQDAV+ V ++MQKV+EALDTL Sbjct: 378 MVPHIPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRRQQDAVKTVSPRKMQKVFEALDTL 437 Query: 1532 GNTKWRVNRRILNVVENLWAAGGDIAGLVNRKNVPIPELLSDDEKEIXXXXXXXXXXXXI 1711 GNTKWRVN+ IL+VVE++WAAGG+IAGLVNR++VP+PEL SDD EI Sbjct: 438 GNTKWRVNKSILSVVEDIWAAGGNIAGLVNREDVPLPELHSDDPIEIKKWKFSIRKAKKN 497 Query: 1712 NQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEF 1891 N E HS RCD ELKLSVAR MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGILEF Sbjct: 498 NMEMHSLRCDTELKLSVARAMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGILEF 557 Query: 1892 ADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWL 2071 ++GRPLGKSGL WLK+HLANL+GGGV+KL YD R+SFVENNI E+ DSADN L+GNRWWL Sbjct: 558 SEGRPLGKSGLYWLKLHLANLFGGGVQKLPYDERLSFVENNITEVFDSADNPLSGNRWWL 617 Query: 2072 KAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL 2251 KAEDPFQ LAACIN+SEAL+SSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL Sbjct: 618 KAEDPFQFLAACINISEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL 677 Query: 2252 VAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYG 2431 VAG +P+DVYSEIAERV IMK DSEKDP DPNA+LAKLLIGQVDRKLVKQTVMTSVYG Sbjct: 678 VAGHKPTDVYSEIAERVLDIMKSDSEKDPADDPNAVLAKLLIGQVDRKLVKQTVMTSVYG 737 Query: 2432 VTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAK 2611 VTYVGAREQI++RL EKG I+DDK+LF A+CYAA+VTMAAL +LFQAARAIM WLGDCAK Sbjct: 738 VTYVGAREQIRKRLAEKGFINDDKVLFMAACYAAKVTMAALGQLFQAARAIMSWLGDCAK 797 Query: 2612 IIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNF 2791 II EN PVRWTTPLGLPVVQPYFK++RHVI+TSLQVLALQREGD VEVRKQ+TAFPPNF Sbjct: 798 IIASENQPVRWTTPLGLPVVQPYFKTKRHVIRTSLQVLALQREGDSVEVRKQKTAFPPNF 857 Query: 2792 VHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENL 2971 VHSLDG+HMMMTA+ACR+AGLRFAGVHDSFWTHACDVD+MNQILR+KFV+LYSMP+LE+L Sbjct: 858 VHSLDGSHMMMTAVACRDAGLRFAGVHDSFWTHACDVDKMNQILREKFVDLYSMPILEDL 917 Query: 2972 LESFQXXXXXXXXXXXXERGDFDLEKVLESPYFFN 3076 LESFQ +RGDFDL VL+SPYFFN Sbjct: 918 LESFQSSYPTLRFPPLPKRGDFDLRNVLDSPYFFN 952 >ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica] gi|462398756|gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica] Length = 976 Score = 1319 bits (3414), Expect = 0.0 Identities = 661/986 (67%), Positives = 768/986 (77%), Gaps = 1/986 (0%) Frame = +2 Query: 122 LASTTQFVPSSGAQFYQSPPPWKPRKKLSFIXXXXXXXXXXXXXXXXXXXXXFPQTLKXX 301 +AST F PS AQ Y W KL+ FP LK Sbjct: 1 MASTASFSPSPQAQTYTCSSRWSKAPKLNHKFLFSSTSNSLFFKPSHSSSTHFPLNLKPP 60 Query: 302 XXXXXXXXXXXXVSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISA 481 + D EN N Q+ + F P ES R+FI+DPPWI++ Sbjct: 61 PEPVHIPPLRDSIQDNI-------VENSMNFQIPMSEFHLITPQESAPRIFIQDPPWIAS 113 Query: 482 LFMKNLLFRSKKSSGIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXXXXXXXXXX 661 LF+K + R+ + +KLE +E+ERR Y LRRRQ+KAETEAW+ MV Sbjct: 114 LFLKGIYKRANQE--LKLESKEIERRNYNVLRRRQIKAETEAWERMVDEYKDLEKVMREK 171 Query: 662 KLAPNLPYFKKLMLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKL 841 KLAPNLPY K L LGWF+P REAI +EQ ++++K+KAAFAP ID LPADK+A+IVMHK+ Sbjct: 172 KLAPNLPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKM 231 Query: 842 MSLLMMGGKEAKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEV 1021 M L+M+G ++ V+VV+AAV IG+AIEQEVRI +FL+K KN QKK+ E+ SKE Sbjct: 232 MGLVMVGNQDG-CVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEK 290 Query: 1022 TILRQRVKRLIKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQT 1201 ILR+RV LI+R R+ EVQKLL EE + WGRD QAKLG L+ELLT++AYVQPP+ Q Sbjct: 291 EILRKRVNGLIRRKRLNEVQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQL 350 Query: 1202 ADSPPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVP 1381 ADSPPDVRPAFRH FK A+ PGQ IVK YG IECDPLVL GLDKT +HM+IPYVPMLVP Sbjct: 351 ADSPPDVRPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVP 410 Query: 1382 PKRWKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRR 1561 PKRWKGYDKGG+LFLPSY+MRTHGSR+Q DA+R + QMQKV+EALD LG+TKWRVN++ Sbjct: 411 PKRWKGYDKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKK 470 Query: 1562 ILNVVENLWAAGGDIAGLVNRKNVPIPELL-SDDEKEIXXXXXXXXXXXXINQERHSQRC 1738 +L+VVE++WA GG+IAGLVNR++VP+P+ S+D KEI INQERHSQRC Sbjct: 471 VLSVVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRC 530 Query: 1739 DVELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKS 1918 D ELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKS Sbjct: 531 DTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKS 590 Query: 1919 GLRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCL 2098 GLRWLKIHLANLY GGVEKLSY+ R++FV+N+I +I DSA N +NGNRWWL AEDP QCL Sbjct: 591 GLRWLKIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCL 650 Query: 2099 AACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDV 2278 AACINLSEAL S SPHTVISHLPIHQDGSCNGLQHYAALGRDS EAAAVNLV GD+P+DV Sbjct: 651 AACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADV 710 Query: 2279 YSEIAERVHIIMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQ 2458 YSEIA RVH IMKRDS KDP T PNALLA++L+ Q+DRKLVKQTVMTSVYGVTYVGAREQ Sbjct: 711 YSEIAARVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQ 770 Query: 2459 IKRRLEEKGLISDDKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPV 2638 IKRRLEEKGLI+DD+LLF+A+CYAA+VT+AAL E+FQAAR IM WLGDCAK+I EN PV Sbjct: 771 IKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPV 830 Query: 2639 RWTTPLGLPVVQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHM 2818 RWTTPLGLPVVQPY KS+RH+I+TSLQVLALQRE + V++RKQRTAFPPNFVHSLDG+HM Sbjct: 831 RWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHM 890 Query: 2819 MMTAIACRNAGLRFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXX 2998 MMTA+ACR+AGLRFAGVHDSFWTH CDVD+MN+ILR+KFVELYSMP+LE+LLESFQ Sbjct: 891 MMTALACRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILESLLESFQASYP 950 Query: 2999 XXXXXXXXERGDFDLEKVLESPYFFN 3076 ERGDFDL +VLESPYFFN Sbjct: 951 ALTFPPLPERGDFDLLQVLESPYFFN 976 >ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 973 Score = 1304 bits (3375), Expect = 0.0 Identities = 640/914 (70%), Positives = 753/914 (82%), Gaps = 1/914 (0%) Frame = +2 Query: 338 VSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKK 517 ++D+ N N EN QV P P R+FI+DPPWI++LF+K + + K Sbjct: 73 LNDSVQDNLVENLENSIKFQV-----PISEP-----RIFIQDPPWIASLFLKGMFKKVNK 122 Query: 518 SSGIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKL 697 +K+E +E++RRKY LRRRQ+KAETEAW+ MV KLAP+LPY K L Sbjct: 123 E--LKVESKEIDRRKYNLLRRRQIKAETEAWEKMVEDYKDLERVMREKKLAPSLPYVKAL 180 Query: 698 MLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAK 877 LGWF+P REAI KEQ ++++K+K AFAP ID LPADK+A+IVMHKLM L+MMG ++ Sbjct: 181 FLGWFEPLREAIAKEQKAQQTKKHKQAFAPHIDLLPADKMALIVMHKLMGLVMMGNQDG- 239 Query: 878 SVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIK 1057 V+VV+AAV IG+AIEQEVRI +FL+K K+ Q+K+ E+ SKE ILR+RV LI+ Sbjct: 240 CVQVVQAAVHIGMAIEQEVRIHSFLEKSKSLQRKKTSVADEDGLSKEKEILRKRVNGLIR 299 Query: 1058 RNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFR 1237 R R+ EVQKLL+ E+ + WGRDTQAKLG L+ELLT++A+VQPP+DQ AD PPDVRPAFR Sbjct: 300 RKRLVEVQKLLKKEDMKPWGRDTQAKLGSRLIELLTETAHVQPPLDQLADGPPDVRPAFR 359 Query: 1238 HIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGY 1417 H K AA+ PGQ +VK YG IECDPLVL GLDKT +HM+IPYVPMLVPPKRWKGYDKGG+ Sbjct: 360 HRLKAAAKSPGQKLVKNYGVIECDPLVLAGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGH 419 Query: 1418 LFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAG 1597 LFLPSY+MRTHGSR+Q D +R + +QMQKV+EALD LG+TKWR+N+++LNVVE++WA G Sbjct: 420 LFLPSYVMRTHGSRKQVDTMRNISGRQMQKVFEALDMLGSTKWRINKKVLNVVESIWARG 479 Query: 1598 GDIAGLVNRKNVPIPELL-SDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVARNM 1774 G+IAGLV+R++VP+PE S+D EI +NQERHSQRCD ELKLSVAR M Sbjct: 480 GNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQRCDTELKLSVARRM 539 Query: 1775 KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANL 1954 KDE+GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIHLANL Sbjct: 540 KDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANL 599 Query: 1955 YGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKS 2134 Y GGVEKLSYD R+SFV+N+I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S Sbjct: 600 YSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNS 659 Query: 2135 SSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIM 2314 SPHTVISHLPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IM Sbjct: 660 PSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAVRVHDIM 719 Query: 2315 KRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIS 2494 KRDS KDP T+PNALLAK+L+ Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI+ Sbjct: 720 KRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIT 779 Query: 2495 DDKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQ 2674 DD+LLF+A+CYAA+VT+AAL E+FQAAR IM WLGDCAK+I EN PVRWTTPLGLPVVQ Sbjct: 780 DDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQ 839 Query: 2675 PYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGL 2854 PY KS+RH+I+TSLQVLALQRE +LV+VRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AG+ Sbjct: 840 PYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPPNFVHSLDGSHMMMTALACRDAGI 899 Query: 2855 RFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXERGD 3034 RFAGVHDSFWTHACDVD+MNQILR+ FVELYS P+LENLLESFQ ERGD Sbjct: 900 RFAGVHDSFWTHACDVDQMNQILRENFVELYSKPILENLLESFQAAYPELTFPPLPERGD 959 Query: 3035 FDLEKVLESPYFFN 3076 FDL++VL+SPYFFN Sbjct: 960 FDLQEVLKSPYFFN 973 >ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis vinifera] Length = 979 Score = 1296 bits (3355), Expect = 0.0 Identities = 633/909 (69%), Positives = 753/909 (82%), Gaps = 2/909 (0%) Frame = +2 Query: 356 HNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKKSS-GIK 532 +N ++ SN+QV ES R+F++DPPWIS+ + R++++ +K Sbjct: 83 NNSIETLQDSSNIQV----------KESIPRIFVQDPPWISSFLFHDWCERNRRTGQNVK 132 Query: 533 LEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKLMLGWF 712 LEF+E ERR Y LRRRQVKAETEAW+ MV KLAPNLPY K L LGWF Sbjct: 133 LEFRETERRNYGLLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWF 192 Query: 713 QPFREAIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAKSVRVV 892 +P REAI+KEQ +R++K KAA+AP I+ LPADK+A+IVMHK+M L+MMG +E VRVV Sbjct: 193 EPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMGHEEG-CVRVV 251 Query: 893 EAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKRNRVA 1072 +AAVQIG+AIEQEVRI +FL+K KN ++ + V +E +E ILR+RVK I++ ++ Sbjct: 252 QAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQE-GLREKEILRKRVKSFIRKKKII 310 Query: 1073 EVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKI 1252 EVQKL+++EE WGRDTQAKLG L+ELLT++AYVQ P++Q+AD PPDVRPAFRH FK Sbjct: 311 EVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKT 370 Query: 1253 AAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPS 1432 +E GQ +KYG IECDPLVL GLD+T +HM+IPYVPML+PPK+WKGYDKGGYLFLPS Sbjct: 371 VTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPS 430 Query: 1433 YLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDIAG 1612 Y+MRTHGSR+QQDAV++VP +Q+QKV+EALDTLGNTKWR+NRR+L+VVE++WA GG++ G Sbjct: 431 YVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGG 490 Query: 1613 LVNRKNVPIPELLS-DDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVARNMKDEEG 1789 LV+R+NVP+PE S +D EI INQERHS RCD E+KLSVAR MKDEEG Sbjct: 491 LVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEG 550 Query: 1790 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 1969 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKI LANLY GGV Sbjct: 551 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGV 610 Query: 1970 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHT 2149 EKLSYD R++FV+N++ ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHT Sbjct: 611 EKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHT 670 Query: 2150 VISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSE 2329 VISHLPIHQDGSCNGLQHYAALGR+S EA+AVNLVAG++P+DVYSEIA RVH IMKRDS Sbjct: 671 VISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSN 730 Query: 2330 KDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLL 2509 KDP TDP ALLAK+LIGQVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKGLI+D++LL Sbjct: 731 KDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLL 790 Query: 2510 FSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQPYFKS 2689 F+A+CYAA+VT+AAL E+FQAAR IM WLG+CAK+I EN PV+WTTPLGLPV+QPY KS Sbjct: 791 FTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKS 850 Query: 2690 QRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGV 2869 +RH+I+TSLQVLALQREG +V +RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGV Sbjct: 851 ERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGV 910 Query: 2870 HDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXERGDFDLEK 3049 HDSFWTHACDVD+MNQILR+KFVELYSMP+LENLLESFQ +RG+FDL + Sbjct: 911 HDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLRE 970 Query: 3050 VLESPYFFN 3076 VLESPYFFN Sbjct: 971 VLESPYFFN 979 >ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis sativus] Length = 975 Score = 1290 bits (3338), Expect = 0.0 Identities = 631/913 (69%), Positives = 756/913 (82%) Frame = +2 Query: 338 VSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKK 517 ++D+ N+T +N NLQ+ + ES R+FI+DPPWI++LF+K L +K Sbjct: 67 LADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGLYKCVQK 126 Query: 518 SSGIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKL 697 +KLEF E+E+RKY LRRRQ+KAETEAW+ MV KLAPNLPY KKL Sbjct: 127 E--VKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKL 184 Query: 698 MLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAK 877 LGWF+P + AIE+EQ +RS+K KAAFAP I+ L ADK+A+IVM+K+M LLMM ++ Sbjct: 185 FLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQDG- 243 Query: 878 SVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIK 1057 V+VV+AAVQIG AIEQEVRIQ+ L+K +++Q+ +V A+ E +KE +LR++V LI+ Sbjct: 244 CVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRAD-TECLTKEKEVLRKQVNGLIR 302 Query: 1058 RNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFR 1237 R ++ EVQKLL+ EEF++WGRDTQAKLG L+ELL +SA++QPP+ Q+ADSPPD+RPAF Sbjct: 303 RRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFW 362 Query: 1238 HIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGY 1417 H FK A+ PGQ+ VKKYG +ECDP+VL GLD+T +HM+IPY+PMLVPPK+WKGYDKGG+ Sbjct: 363 HGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGH 422 Query: 1418 LFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAG 1597 FLPSY+MRTHGS RQQDA++ + KQMQKV+EALD LG+TKWRVNR +L+VVE+LWA G Sbjct: 423 FFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQG 482 Query: 1598 GDIAGLVNRKNVPIPELLSDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVARNMK 1777 G+ AGLV+RK+VPIPE D E+ INQE HSQRCDVELKLSVAR MK Sbjct: 483 GNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMK 542 Query: 1778 DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLY 1957 DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY Sbjct: 543 DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLY 602 Query: 1958 GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 2137 GGVEKLSYD R++FV++++ I DSA N +NG+RWWL AEDPFQCLAAC+NLSEALKSS Sbjct: 603 AGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSS 662 Query: 2138 SPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMK 2317 +PHTVIS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IM Sbjct: 663 APHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMI 722 Query: 2318 RDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISD 2497 RD+ KDP T+PNA LAKLLI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEEKGLISD Sbjct: 723 RDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISD 782 Query: 2498 DKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQP 2677 D+L F ASCYAA+VT++AL E+F+AAR IMGWLGDCAK+I ++N PVRWTTPLGLPVVQP Sbjct: 783 DRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQP 842 Query: 2678 YFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLR 2857 Y+KS+RH+I+TSLQVLALQREG+LV+VRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGLR Sbjct: 843 YYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLR 902 Query: 2858 FAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXERGDF 3037 FAGVHDSFWTHACDVDRMN ILR+KFVELYSMPVLE+LLE F+ RGDF Sbjct: 903 FAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDF 962 Query: 3038 DLEKVLESPYFFN 3076 DL++VL+SPYFFN Sbjct: 963 DLQEVLKSPYFFN 975 >ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao] gi|508784240|gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao] Length = 978 Score = 1289 bits (3336), Expect = 0.0 Identities = 635/914 (69%), Positives = 760/914 (83%), Gaps = 3/914 (0%) Frame = +2 Query: 344 DATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKKSS 523 D+ N+ N EN SN + L ES R+FI+DPPWISALF+K L + ++ Sbjct: 69 DSLHDNFVENIENPSNFLLPKAQSHQILSPESTPRLFIQDPPWISALFLKGLYKMTNQT- 127 Query: 524 GIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKLML 703 +K+E +E+E+RKY LRRRQVK ETEAW+ MV KLAPNLPY K L L Sbjct: 128 -VKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFL 186 Query: 704 GWFQPFREAIEKEQNVRR--SQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAK 877 GWF+P REAI +EQ V++ S+K +AA+AP I+ LPADK+A+IVMHK+M L+M G +E Sbjct: 187 GWFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM-GAQENG 245 Query: 878 SVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIK 1057 V+VV+AAV IGVAIEQEVRI NFL+K KN Q+K+ E + SKE IL++RV LI+ Sbjct: 246 FVQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDE-VQGLSKEKEILKKRVNSLIR 304 Query: 1058 RNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFR 1237 R R+ EVQKL+++EE + WGRD QAKLG LLELLT++AYVQPPIDQ+ DSPPDV+PAFR Sbjct: 305 RRRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFR 364 Query: 1238 HIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGY 1417 H FK +++PG+ ++K+YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+WKGYDKGGY Sbjct: 365 HKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGY 424 Query: 1418 LFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAG 1597 LFLPSY+MRTHGSR+QQDA++ V VK+MQKV+EALDTLG+TKWRVN+++L VVE++WA+G Sbjct: 425 LFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASG 484 Query: 1598 GDIAGLVNRKNVPIPEL-LSDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVARNM 1774 G+IAGLV+R ++PIPE S+D E IN+ERHSQRCD ELKLSVAR M Sbjct: 485 GNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKM 544 Query: 1775 KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANL 1954 ++EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLG+SGL WLKIHLANL Sbjct: 545 ENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANL 604 Query: 1955 YGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKS 2134 + GGVEKLS+D R++FV+N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKS Sbjct: 605 FAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKS 664 Query: 2135 SSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIM 2314 SSPH+V+S+LPIHQDGSCNGLQHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IM Sbjct: 665 SSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIM 724 Query: 2315 KRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIS 2494 KRDS+KDP T+PNA LAKLLI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+ Sbjct: 725 KRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHIT 784 Query: 2495 DDKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQ 2674 DD++LF+A+CY A+VT+AAL ELFQAAR IMGWLGDCAK+I EN PV+WTTPLGLPVVQ Sbjct: 785 DDRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQ 844 Query: 2675 PYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGL 2854 PY+KS+RH+I+TSLQVLALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL Sbjct: 845 PYYKSERHLIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGL 904 Query: 2855 RFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXERGD 3034 FAGVHDSFWTHACDV++MNQILR+KFVELYSMPVLENL ES Q ERG+ Sbjct: 905 HFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGN 964 Query: 3035 FDLEKVLESPYFFN 3076 FDL +VL+SPYFFN Sbjct: 965 FDLREVLKSPYFFN 978 >ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis sativus] Length = 975 Score = 1287 bits (3331), Expect = 0.0 Identities = 631/913 (69%), Positives = 755/913 (82%) Frame = +2 Query: 338 VSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKK 517 ++D+ N+T +N NLQ+ + ES R+FI+DPPWI++LF+K L +K Sbjct: 67 LADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGLYKCVQK 126 Query: 518 SSGIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKL 697 +KLEF E+E+RKY LRRRQ+KAETEAW+ MV KLAPNLPY KKL Sbjct: 127 E--VKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKL 184 Query: 698 MLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAK 877 LGWF+P + AIE+EQ +RS+K KAAFAP I+ L ADK+A IVM+K+M LLMM ++ Sbjct: 185 FLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAGIVMYKMMGLLMMAAQDG- 243 Query: 878 SVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIK 1057 V+VV+AAVQIG AIEQEVRIQ+ L+K +++Q+ +V A+ E +KE +LR++V LI+ Sbjct: 244 CVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRAD-TECLTKEKEVLRKQVNGLIR 302 Query: 1058 RNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFR 1237 R ++ EVQKLL+ EEF++WGRDTQAKLG L+ELL +SA++QPP+ Q+ADSPPD+RPAF Sbjct: 303 RRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFW 362 Query: 1238 HIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGY 1417 H FK A+ PGQ+ VKKYG +ECDP+VL GLD+T +HM+IPY+PMLVPPK+WKGYDKGG+ Sbjct: 363 HGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGH 422 Query: 1418 LFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAG 1597 FLPSY+MRTHGS RQQDA++ + KQMQKV+EALD LG+TKWRVNR +L+VVE+LWA G Sbjct: 423 FFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQG 482 Query: 1598 GDIAGLVNRKNVPIPELLSDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVARNMK 1777 G+ AGLV+RK+VPIPE D E+ INQE HSQRCDVELKLSVAR MK Sbjct: 483 GNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMK 542 Query: 1778 DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLY 1957 DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY Sbjct: 543 DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLY 602 Query: 1958 GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 2137 GGVEKLSYD R++FV++++ I DSA N +NG+RWWL AEDPFQCLAAC+NLSEALKSS Sbjct: 603 AGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSS 662 Query: 2138 SPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMK 2317 +PHTVIS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IM Sbjct: 663 APHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMI 722 Query: 2318 RDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISD 2497 RD+ KDP T+PNA LAKLLI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEEKGLISD Sbjct: 723 RDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISD 782 Query: 2498 DKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQP 2677 D+L F ASCYAA+VT++AL E+F+AAR IMGWLGDCAK+I ++N PVRWTTPLGLPVVQP Sbjct: 783 DRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQP 842 Query: 2678 YFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLR 2857 Y+KS+RH+I+TSLQVLALQREG+LV+VRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGLR Sbjct: 843 YYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLR 902 Query: 2858 FAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXERGDF 3037 FAGVHDSFWTHACDVDRMN ILR+KFVELYSMPVLE+LLE F+ RGDF Sbjct: 903 FAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDF 962 Query: 3038 DLEKVLESPYFFN 3076 DL++VL+SPYFFN Sbjct: 963 DLQEVLKSPYFFN 975 >ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 882 Score = 1284 bits (3323), Expect = 0.0 Identities = 627/882 (71%), Positives = 737/882 (83%), Gaps = 1/882 (0%) Frame = +2 Query: 434 ESGGRVFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKYYSLRRRQVKAETEAWQ 613 ES +VFI+DPPWISA F K + + K +K+EF+++E+RKY LRRRQ++ ETEAW+ Sbjct: 4 ESSKKVFIQDPPWISAHFWKGMYKLANKK--VKVEFKDIEKRKYNLLRRRQIREETEAWE 61 Query: 614 NMVXXXXXXXXXXXXXKLAPNLPYFKKLMLGWFQPFREAIEKEQNVRRSQKNKAAFAPFI 793 M KLAPNLPY K L+LGWF+P +EAIEKEQ + +S+K K+AF+P I Sbjct: 62 RMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNI 121 Query: 794 DALPADKIAIIVMHKLMSLLMMGGKEAKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQ 973 + LPADK+A+IVMHK+M LLM+G ++ VRVV+AAVQIG+AIEQEVRI NFL+K KN Q Sbjct: 122 ELLPADKMAVIVMHKMMGLLMVGHEDG-CVRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQ 180 Query: 974 KKEVVAEGEEDSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLL 1153 +K+ + E +E KE +LR+RV LI+R R+ EVQ L++ +E + W R TQAKLG L+ Sbjct: 181 RKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLI 240 Query: 1154 ELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLD 1333 ELLT++AYVQPP++Q+ D PPDVRPAFRHIFK + PGQ IVKKYG IECDPL+L GLD Sbjct: 241 ELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLD 300 Query: 1334 KTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVY 1513 T +HM+IPY PMLVPPK+WKGYDKGG+LFLPSY+MRTHGSR+QQ AVR+VP KQMQKV+ Sbjct: 301 GTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVF 360 Query: 1514 EALDTLGNTKWRVNRRILNVVENLWAAGGDIAGLVNRKNVPIPEL-LSDDEKEIXXXXXX 1690 EALDTLGNTKWRVNRR+L+VVE +W +GG+IAGLV+R+++PIPE SDD EI Sbjct: 361 EALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWS 420 Query: 1691 XXXXXXINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 1870 INQERHSQRCD ELKLSVAR +KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDL Sbjct: 421 VRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDL 480 Query: 1871 CRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSL 2050 CRG+LEF +GRPLGKSGLRWLKIHLANLY GGVEKLS+D R++FVEN+++EI DSA N + Sbjct: 481 CRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPV 540 Query: 2051 NGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSF 2230 NG RWWLKAEDPFQCLAACINLSEAL S+SPHTVISHLPIHQDGSCNGLQHYAALGRD+ Sbjct: 541 NGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTL 600 Query: 2231 EAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQT 2410 EAAAVNLVA ++PSDVYSEIA RVH I++RDS KDP T+P+ALLAK+L+ QVDRKLVKQT Sbjct: 601 EAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQT 660 Query: 2411 VMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMAALEELFQAARAIMG 2590 VMTSVYGVTYVGAREQIKRRLEEKG I+DD+LLFSA+CY A+VT+ AL ELFQAAR IM Sbjct: 661 VMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMS 720 Query: 2591 WLGDCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQR 2770 WLGDCAKII E+ PV+WTTPLGLPVVQPY+K++RH+IKTSLQ+LALQREG V+VRKQR Sbjct: 721 WLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQR 780 Query: 2771 TAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDRMNQILRQKFVELYS 2950 TAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHA DVD MN+ILR+KFVELY+ Sbjct: 781 TAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYN 840 Query: 2951 MPVLENLLESFQXXXXXXXXXXXXERGDFDLEKVLESPYFFN 3076 MP+LENLLE FQ ERG+FDL+KVL SPYFFN Sbjct: 841 MPILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLRSPYFFN 882 >ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa] gi|222854390|gb|EEE91937.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa] Length = 982 Score = 1276 bits (3303), Expect = 0.0 Identities = 626/889 (70%), Positives = 735/889 (82%), Gaps = 1/889 (0%) Frame = +2 Query: 413 FPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKYYSLRRRQVK 592 F + ES RVFIRD PWISAL+ K + K +KLE +++E+RKY LRRRQ++ Sbjct: 97 FDQIVHGESSKRVFIRDSPWISALYWKGTHKIANKK--VKLELKDIEKRKYNLLRRRQIR 154 Query: 593 AETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKLMLGWFQPFREAIEKEQNVRRSQKNK 772 ETEAW+ M KLAPNLPY K L LGWF+P +EAIE+EQ + +S+K K Sbjct: 155 EETEAWERMAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQK 214 Query: 773 AAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAKSVRVVEAAVQIGVAIEQEVRIQNFL 952 +AF+P I+ LPADK+A+IVMHK+M L+M+G ++ VRVV+AAVQIG+AIEQEVRI NFL Sbjct: 215 SAFSPNIELLPADKMAVIVMHKMMGLVMVGHEDG-CVRVVQAAVQIGIAIEQEVRIHNFL 273 Query: 953 KKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFESWGRDTQA 1132 +K KN Q+K+ + + +E KE +LR+RV LI+R R+ EVQ L+ +E + W RD QA Sbjct: 274 EKTKNHQRKKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVIQDETKPWNRDKQA 333 Query: 1133 KLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDP 1312 KLG L+ELLT++AYVQPP+DQ+ PPDVRPAFRHIFK + PGQ VKKYG IECDP Sbjct: 334 KLGSRLIELLTETAYVQPPVDQSEGIPPDVRPAFRHIFKSVTKNPGQKTVKKYGVIECDP 393 Query: 1313 LVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPV 1492 L+L GLD T +HM+IPY PMLVPPK+W+GYDKGG+LFLPSY+MRTHGSR+QQDAVR+VP Sbjct: 394 LILTGLDGTAKHMLIPYFPMLVPPKKWRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPG 453 Query: 1493 KQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDIAGLVNRKNVPIPELLS-DDEKE 1669 KQMQKV+EALDTLGNTKWRVN ++L+VVE +WA+GG+ AGLVNR ++PIPE LS DD E Sbjct: 454 KQMQKVFEALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTE 513 Query: 1670 IXXXXXXXXXXXXINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHL 1849 I INQERHSQRCD ELKLSVAR +KDEEGFYYPHNLDFRGRAYPMHPHL Sbjct: 514 IQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHL 573 Query: 1850 NHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEIL 2029 HLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+D R++FVEN+++EI Sbjct: 574 THLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIF 633 Query: 2030 DSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYA 2209 DSA+N +NG RWWL AEDPFQCLAACINLSEALKS+SPHTVISHLPIHQDGSCNGLQHYA Sbjct: 634 DSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYA 693 Query: 2210 ALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLIGQVD 2389 ALGRDS EAAAVNLVA ++PSDVYSEIA RVH I++RDS KDP T+P+ALLAK+LI +VD Sbjct: 694 ALGRDSQEAAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVD 753 Query: 2390 RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMAALEELFQ 2569 RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG I+DD++LFSA+CYAA+VT+ AL ELFQ Sbjct: 754 RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRVLFSAACYAAKVTLTALGELFQ 813 Query: 2570 AARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLALQREGDL 2749 AAR IMGWLGDCAK+I E+ PVRWTTPLGLPVVQPY+K+QRH+I+TSLQVLALQREG Sbjct: 814 AARDIMGWLGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLIRTSLQVLALQREGSS 873 Query: 2750 VEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDRMNQILRQ 2929 V+VRKQRTAFPPNFVHSLDG+HMMMTA+ACR+A LRFAGVHDSFWTHA D D MN+ILR+ Sbjct: 874 VQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDADLRFAGVHDSFWTHARDADLMNRILRE 933 Query: 2930 KFVELYSMPVLENLLESFQXXXXXXXXXXXXERGDFDLEKVLESPYFFN 3076 KFVELY+MP+LENLLE FQ ERG+FDL++VL SPYFFN Sbjct: 934 KFVELYNMPILENLLEDFQTSYPTLKFPSLPERGNFDLQEVLRSPYFFN 982 >ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus sinensis] Length = 1009 Score = 1266 bits (3275), Expect = 0.0 Identities = 622/912 (68%), Positives = 747/912 (81%), Gaps = 5/912 (0%) Frame = +2 Query: 356 HNYTGNAENMSNLQVIPNGFPSK----LPSESGGRVFIRDPPWISALFMKNLLFRSKKSS 523 H N E ++L VIP S + E R+F++DPPW S++F+K L R K Sbjct: 105 HQRVENTETCADL-VIPRSENSTNHQLMCLEPRRRIFVQDPPWFSSIFLKGLYKRIKLQ- 162 Query: 524 GIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKLML 703 E++EM++RK+ LRRRQVK ETEAW+ MV +LAPNLP+ K L L Sbjct: 163 ----EYREMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFL 218 Query: 704 GWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAKSV 883 GWF P REAIE+EQ ++R++K KAA+AP I+ LPADK+A+IVMHK+M L+M G E + V Sbjct: 219 GWFGPLREAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVM-AGHEDRCV 277 Query: 884 RVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKRN 1063 +VV+AAV IG+AIEQE+RI +FL+K KN ++K+++A+ EE SKE +LR+RV LIK Sbjct: 278 QVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVNSLIKSK 337 Query: 1064 RVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHI 1243 RV E QKLL++EE + WGRDTQAKLG L+ELL ++AYVQ P++ SPPDVRPAFRH Sbjct: 338 RVMEAQKLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHR 397 Query: 1244 FKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLF 1423 FK + PGQ K+YG +ECDPLVL GLD++ +HM+IPYVPMLVPPK+WKGY+KGGYLF Sbjct: 398 FKTILKHPGQKTTKRYGVVECDPLVLAGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLF 457 Query: 1424 LPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGD 1603 LPSY+MRTHGSR+QQ+A+++V M+KV+EALDTLG+TKWRVN+++L+V+E++W +GG+ Sbjct: 458 LPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGN 517 Query: 1604 IAGLVNRKNVPIPEL-LSDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVARNMKD 1780 IAGLV+R +VPIPE LS+D E+ INQERHSQRCD ELKLSVAR MKD Sbjct: 518 IAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKD 577 Query: 1781 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYG 1960 EEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+LEFA+GRPLGKSGLRWLKIHLANL+ Sbjct: 578 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFS 637 Query: 1961 GGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSS 2140 GGVEKLS+D R++FVEN++ EI DSA+N +NG+RWWL AEDPFQCLAACINLSEALKSSS Sbjct: 638 GGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSS 697 Query: 2141 PHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKR 2320 PH+VISHLPIHQDGSCNGLQHYAALGR++ EAAAVNLVAG++P+DVYSEIA RVH IMKR Sbjct: 698 PHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKR 757 Query: 2321 DSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDD 2500 DS KDP P ALLAK+LI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD Sbjct: 758 DSNKDPSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDD 817 Query: 2501 KLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQPY 2680 + LF+A+CYAA+VT+ AL E+F+AAR+IMGWLGDCAK+I EN PVRWTTPLGLPVVQPY Sbjct: 818 RQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPY 877 Query: 2681 FKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRF 2860 K++RH+I+TSLQVLALQREG VE+RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL F Sbjct: 878 CKNERHLIRTSLQVLALQREGKSVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHF 937 Query: 2861 AGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXERGDFD 3040 AGVHDSFWTHACDVD MNQILR+KFVELY+MP+LENLLESFQ ERG+FD Sbjct: 938 AGVHDSFWTHACDVDEMNQILRKKFVELYNMPILENLLESFQTSYPTLSFPPLPERGNFD 997 Query: 3041 LEKVLESPYFFN 3076 LE+VLESPYFFN Sbjct: 998 LEEVLESPYFFN 1009 >ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina] gi|557556792|gb|ESR66806.1| hypothetical protein CICLE_v10007333mg [Citrus clementina] Length = 1012 Score = 1256 bits (3250), Expect = 0.0 Identities = 610/878 (69%), Positives = 734/878 (83%), Gaps = 1/878 (0%) Frame = +2 Query: 446 RVFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVX 625 R+F++DPPW S++F+K L R K E++EM++RK+ LRRRQVK ETEAW+ MV Sbjct: 141 RIFVQDPPWFSSIFLKGLYKRIKLQ-----EYREMKKRKFNLLRRRQVKQETEAWERMVD 195 Query: 626 XXXXXXXXXXXXKLAPNLPYFKKLMLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALP 805 +LAPNLP+ K L LGWF P EAIE+EQ ++R++K KAA+AP I+ LP Sbjct: 196 EYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLP 255 Query: 806 ADKIAIIVMHKLMSLLMMGGKEAKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEV 985 ADK+A+IVMHK+M L+M G E + V+VV+AAV IG+AIEQE+RI +FL+K KN ++K++ Sbjct: 256 ADKMAVIVMHKMMGLVM-AGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKI 314 Query: 986 VAEGEEDSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLT 1165 +A+ EE SKE +LR+RV LIK RV E QKLL++EE + WGRDTQAKLG L+ELL Sbjct: 315 IADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELLI 374 Query: 1166 QSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVR 1345 ++AYVQ P++ SPPDVRPAFRH FK + PGQ K+YG +ECDPLVL GLD++ + Sbjct: 375 ETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSAK 434 Query: 1346 HMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALD 1525 HM+IPYVPMLVPPK+WKGY+KGGYLFLPSY+MRTHGSR+QQ+A+++V M+KV+EALD Sbjct: 435 HMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALD 494 Query: 1526 TLGNTKWRVNRRILNVVENLWAAGGDIAGLVNRKNVPIPEL-LSDDEKEIXXXXXXXXXX 1702 TLG+TKWRVN+++L+V+E++W +GG+IAGLV+R +V IPE LS+D E+ Sbjct: 495 TLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKA 554 Query: 1703 XXINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGI 1882 INQERHSQRCD ELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+ Sbjct: 555 KKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGV 614 Query: 1883 LEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNR 2062 LEFA+GRPLGKSGLRWLKIHLANL+ GGVEKLS+D R++FVEN++ EI DSA+N +NG+R Sbjct: 615 LEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSR 674 Query: 2063 WWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAA 2242 WWL AEDPFQCLAACINL+EALKSSSPH+VISHLPIHQDGSCNGLQHYAALGR++ EAAA Sbjct: 675 WWLTAEDPFQCLAACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAA 734 Query: 2243 VNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTS 2422 VNLVAG++P+DVYSEIA RVH IMKRDS KD P ALLAK+LI QVDRKLVKQTVMTS Sbjct: 735 VNLVAGEKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTVMTS 794 Query: 2423 VYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMAALEELFQAARAIMGWLGD 2602 VYGVT+VGAREQIKRRLEEKG I+DD+ LF+A+CYAA+VT+ AL E+F+AAR+IMGWLGD Sbjct: 795 VYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGD 854 Query: 2603 CAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFP 2782 CAK+I EN PVRWTTPLGLPVVQPY K++RH+I+TSLQVLALQREG+LVE+RKQRTAFP Sbjct: 855 CAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFP 914 Query: 2783 PNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVL 2962 PNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD MNQILR+KFVELY+MP+L Sbjct: 915 PNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPML 974 Query: 2963 ENLLESFQXXXXXXXXXXXXERGDFDLEKVLESPYFFN 3076 ENLLESFQ ERG+FDLE+VLESPYFFN Sbjct: 975 ENLLESFQTSYPTLSFPSLPERGNFDLEEVLESPYFFN 1012 >emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea] Length = 989 Score = 1255 bits (3248), Expect = 0.0 Identities = 611/882 (69%), Positives = 734/882 (83%), Gaps = 1/882 (0%) Frame = +2 Query: 434 ESGGRVFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKYYSLRRRQVKAETEAWQ 613 + R+F++DPPW++ LFMK L+ ++G++LEF+E+ER KY LRRRQ+KAETEAW+ Sbjct: 114 KGSSRIFMQDPPWVNTLFMKGLV---DSNTGLRLEFKEIEREKYNLLRRRQIKAETEAWE 170 Query: 614 NMVXXXXXXXXXXXXXKLAPNLPYFKKLMLGWFQPFREAIEKEQNVRRSQKNKAAFAPFI 793 +MV KLAPNLP K L LGWF+P ++AIEKEQ +RS+K KA + I Sbjct: 171 SMVEEYREFVREMRDKKLAPNLPQVKALFLGWFEPLKKAIEKEQKSQRSRKQKAIYGYHI 230 Query: 794 DALPADKIAIIVMHKLMSLLMMGGKEAKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQ 973 D LPADK+A+IVMHK+MSLLM+G +A VR+V+AA+QIG AIEQE++I +FL+K KN + Sbjct: 231 DMLPADKMAVIVMHKMMSLLMVGN-DAGCVRLVQAALQIGTAIEQEIKIHSFLEKTKNIR 289 Query: 974 KKEVVAEGEEDSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLL 1153 K ++ ED KE I R RVK LIKR R+ E KL+ SE+ +SW +DTQAKLG L+ Sbjct: 290 KN--ASDLPEDLLKEKEIQRNRVKSLIKRKRLFEAAKLVTSEDSKSWSQDTQAKLGSRLI 347 Query: 1154 ELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLD 1333 ELL +AY+Q P Q+AD+PPDVRPAFRH FKI E GQ +VK+YG IECDPLVL G+D Sbjct: 348 ELLIDTAYIQHPTSQSADTPPDVRPAFRHKFKILNNELGQQVVKRYGVIECDPLVLKGID 407 Query: 1334 KTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVY 1513 ++ R+MIIPYVPML+PPK WKGYDKGGYLFLPSY+MRTHGSR+QQDA+R P +QMQKV+ Sbjct: 408 RSARYMIIPYVPMLIPPKNWKGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVF 467 Query: 1514 EALDTLGNTKWRVNRRILNVVENLWAAGGDIAGLVNRKNVPIPEL-LSDDEKEIXXXXXX 1690 EAL+TLG+TKWR+NR++L VVENLWA+GG+I GLVN +VP+PE L++D EI Sbjct: 468 EALNTLGHTKWRINRKVLGVVENLWASGGNIGGLVNCDDVPLPEKPLTEDPAEIDTWKWS 527 Query: 1691 XXXXXXINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 1870 IN+ERH+ RCDVELK+SVA+ MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL Sbjct: 528 VRKAKKINRERHALRCDVELKISVAQKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 587 Query: 1871 CRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSL 2050 CRG+LEFA GRPLGK+GL WLKIHLAN+Y GGV+KLSY+AR +FVEN++ E+ DSA N + Sbjct: 588 CRGVLEFASGRPLGKTGLHWLKIHLANVYAGGVDKLSYEARAAFVENHLEEVFDSATNPI 647 Query: 2051 NGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSF 2230 NGNRWWL AEDPFQCLAACI+L+ AL SSSPH+ IS+LPIHQDGSCNGLQHYAALGRDS Sbjct: 648 NGNRWWLSAEDPFQCLAACIDLTGALNSSSPHSFISYLPIHQDGSCNGLQHYAALGRDSK 707 Query: 2231 EAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQT 2410 EAAAVNLVAG++P+DVYSEIA RV IM++DS KDP+TDP+A+LAK+L+ QVDRKLVKQT Sbjct: 708 EAAAVNLVAGEEPADVYSEIAVRVREIMEKDSRKDPKTDPHAVLAKVLVDQVDRKLVKQT 767 Query: 2411 VMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMAALEELFQAARAIMG 2590 VMTSVYGVT+VGAREQIKRRLEEKG+I+DD+LLFSA+CY+A+VTM+AL +LFQAAR IM Sbjct: 768 VMTSVYGVTFVGAREQIKRRLEEKGVITDDRLLFSAACYSAKVTMSALGQLFQAARGIMD 827 Query: 2591 WLGDCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQR 2770 WLGDCAK+I EN PVRWTTPLGLPVVQPY KS+RH+IKTSLQVLALQ+EG+ +EV+KQR Sbjct: 828 WLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSKRHLIKTSLQVLALQQEGEGIEVKKQR 887 Query: 2771 TAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDRMNQILRQKFVELYS 2950 TAFPPN+VHSLDGTHMMMTA+ACR+AGL+FAGVHDSFWTHACDV++MNQILR KFVELY+ Sbjct: 888 TAFPPNYVHSLDGTHMMMTAVACRDAGLQFAGVHDSFWTHACDVEKMNQILRVKFVELYN 947 Query: 2951 MPVLENLLESFQXXXXXXXXXXXXERGDFDLEKVLESPYFFN 3076 MP+LENLLESFQ ERGDFDLE+VLESPYFFN Sbjct: 948 MPILENLLESFQTAYPASTFPPLPERGDFDLEEVLESPYFFN 989 >ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao] gi|508784241|gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao] Length = 857 Score = 1250 bits (3235), Expect = 0.0 Identities = 611/854 (71%), Positives = 728/854 (85%), Gaps = 4/854 (0%) Frame = +2 Query: 527 IKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKLMLG 706 +K+E +E+E+RKY LRRRQVK ETEAW+ MV KLAPNLPY K L LG Sbjct: 6 VKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLG 65 Query: 707 WFQPFREAIEKEQNVRR--SQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKEAKS 880 WF+P REAI +EQ V++ S+K +AA+AP I+ LPADK+A+IVMHK+M L+M G +E Sbjct: 66 WFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM-GAQENGF 124 Query: 881 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1060 V+VV+AAV IGVAIEQEVRI NFL+K KN Q+K+ E + SKE IL++RV LI+R Sbjct: 125 VQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDE-VQGLSKEKEILKKRVNSLIRR 183 Query: 1061 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 1240 R+ EVQKL+++EE + WGRD QAKLG LLELLT++AYVQPPIDQ+ DSPPDV+PAFRH Sbjct: 184 RRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRH 243 Query: 1241 IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 1420 FK +++PG+ ++K+YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+WKGYDKGGYL Sbjct: 244 KFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYL 303 Query: 1421 FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGG 1600 FLPSY+MRTHGSR+QQDA++ V VK+MQKV+EALDTLG+TKWRVN+++L VVE++WA+GG Sbjct: 304 FLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGG 363 Query: 1601 DIAGLVNRKNVPIPEL-LSDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVARNMK 1777 +IAGLV+R ++PIPE S+D E IN+ERHSQRCD ELKLSVAR M+ Sbjct: 364 NIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKME 423 Query: 1778 DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLY 1957 +EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLG+SGL WLKIHLANL+ Sbjct: 424 NEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLF 483 Query: 1958 GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 2137 GGVEKLS+D R++FV+N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSS Sbjct: 484 AGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSS 543 Query: 2138 SPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMK 2317 SPH+V+S+LPIHQDGSCNGLQHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IMK Sbjct: 544 SPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMK 603 Query: 2318 RDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISD 2497 RDS+KDP T+PNA LAKLLI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+D Sbjct: 604 RDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITD 663 Query: 2498 DKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPVVQP 2677 D++LF+A+CY A+VT+AAL ELFQAAR IMGWLGDCAK+I EN PV+WTTPLGLPVVQP Sbjct: 664 DRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQP 723 Query: 2678 YFKSQRHVIKTSLQVLALQREGD-LVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGL 2854 Y+KS+RH+I+TSLQVLALQREGD +VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL Sbjct: 724 YYKSERHLIRTSLQVLALQREGDSVVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGL 783 Query: 2855 RFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXERGD 3034 FAGVHDSFWTHACDV++MNQILR+KFVELYSMPVLENL ES Q ERG+ Sbjct: 784 HFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGN 843 Query: 3035 FDLEKVLESPYFFN 3076 FDL +VL+SPYFFN Sbjct: 844 FDLREVLKSPYFFN 857 >emb|CBI36559.3| unnamed protein product [Vitis vinifera] Length = 808 Score = 1232 bits (3188), Expect = 0.0 Identities = 593/806 (73%), Positives = 697/806 (86%), Gaps = 1/806 (0%) Frame = +2 Query: 662 KLAPNLPYFKKLMLGWFQPFREAIEKEQNVRRSQKNKAAFAPFIDALPADKIAIIVMHKL 841 KLAPNLPY K L LGWF+P REAI+KEQ +R++K KAA+AP I+ LPADK+A+IVMHK+ Sbjct: 5 KLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKM 64 Query: 842 MSLLMMGGKEAKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEV 1021 M L+MMG +E VRVV+AAVQIG+AIEQEVRI +FL+K KN ++ + V +E +E Sbjct: 65 MGLVMMGHEEG-CVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQE-GLREK 122 Query: 1022 TILRQRVKRLIKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQT 1201 ILR+RVK I++ ++ EVQKL+++EE WGRDTQAKLG L+ELLT++AYVQ P++Q+ Sbjct: 123 EILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQS 182 Query: 1202 ADSPPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVP 1381 AD PPDVRPAFRH FK +E GQ +KYG IECDPLVL GLD+T +HM+IPYVPML+P Sbjct: 183 ADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIP 242 Query: 1382 PKRWKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRR 1561 PK+WKGYDKGGYLFLPSY+MRTHGSR+QQDAV++VP +Q+QKV+EALDTLGNTKWR+NRR Sbjct: 243 PKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRR 302 Query: 1562 ILNVVENLWAAGGDIAGLVNRKNVPIPELLS-DDEKEIXXXXXXXXXXXXINQERHSQRC 1738 +L+VVE++WA GG++ GLV+R+NVP+PE S +D EI INQERHS RC Sbjct: 303 VLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRC 362 Query: 1739 DVELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKS 1918 D E+KLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKS Sbjct: 363 DTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKS 422 Query: 1919 GLRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCL 2098 GLRWLKI LANLY GGVEKLSYD R++FV+N++ ++ DSADN LNGNRWWL AEDPFQCL Sbjct: 423 GLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCL 482 Query: 2099 AACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDV 2278 AACINLSEAL+SSSPHTVISHLPIHQDGSCNGLQHYAALGR+S EA+AVNLVAG++P+DV Sbjct: 483 AACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADV 542 Query: 2279 YSEIAERVHIIMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQ 2458 YSEIA RVH IMKRDS KDP TDP ALLAK+LIGQVDRKLVKQTVMTSVYGVTY+GAREQ Sbjct: 543 YSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQ 602 Query: 2459 IKRRLEEKGLISDDKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPV 2638 IKRRL EKGLI+D++LLF+A+CYAA+VT+AAL E+FQAAR IM WLG+CAK+I EN PV Sbjct: 603 IKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPV 662 Query: 2639 RWTTPLGLPVVQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHM 2818 +WTTPLGLPV+QPY KS+RH+I+TSLQVLALQREG +V +RKQRTAFPPNFVHSLDG+HM Sbjct: 663 QWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHM 722 Query: 2819 MMTAIACRNAGLRFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXX 2998 MMTA+ACR+AGL FAGVHDSFWTHACDVD+MNQILR+KFVELYSMP+LENLLESFQ Sbjct: 723 MMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHP 782 Query: 2999 XXXXXXXXERGDFDLEKVLESPYFFN 3076 +RG+FDL +VLESPYFFN Sbjct: 783 TLTFPPLPDRGNFDLREVLESPYFFN 808 >ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella] gi|482564829|gb|EOA29019.1| hypothetical protein CARUB_v10025273mg [Capsella rubella] Length = 991 Score = 1224 bits (3167), Expect = 0.0 Identities = 601/916 (65%), Positives = 737/916 (80%), Gaps = 8/916 (0%) Frame = +2 Query: 353 DHNYTGNAENMSNLQVIPNGFPSKLPSESGG-----RVFIRDPPWISALFMKNLLFRSKK 517 D +Y G + S ++ + N P E G R+F++DPPWISALF+K L Sbjct: 90 DSSYAGTIKGASLIEELEN------PVERNGLSGRRRLFMQDPPWISALFLKGL--SKMV 141 Query: 518 SSGIKLEFQEMERRKYYSLRRRQVKAETEAWQNMVXXXXXXXXXXXXXKLAPNLPYFKKL 697 +K+E + +++RK+ SLRRRQVK ETEAW+ MV LAPNLPY K + Sbjct: 142 DQTVKIEHKYIDKRKFDSLRRRQVKEETEAWEKMVDEYRDLEKEMCEKNLAPNLPYVKHM 201 Query: 698 MLGWFQPFREAIEKEQNVRR--SQKNKAAFAPFIDALPADKIAIIVMHKLMSLLMMGGKE 871 LGWFQP ++ IE+EQ +++ S+K +AA+AP I+ LPADK+A+IVMHK+M L+M G ++ Sbjct: 202 FLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED 261 Query: 872 AKSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRL 1051 ++VV+AAV IG+AIEQEVRI NFLK+ + + A ++ KE +LR+RV L Sbjct: 262 G-CIQVVQAAVSIGIAIEQEVRIHNFLKRTRKNN-----AGDSQEELKEKQLLRKRVNSL 315 Query: 1052 IKRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPA 1231 I+R R+ + K+++SE + WGR TQAKLG LLELL ++AYVQPP+ Q+ DS P+ RPA Sbjct: 316 IRRKRIIDALKVVKSEGIKPWGRATQAKLGSRLLELLIETAYVQPPLTQSGDSIPEFRPA 375 Query: 1232 FRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKG 1411 FRH FK + PG +V++YG IECD L+L GLDK+ +HMIIPYVPMLVPPKRWKGYDKG Sbjct: 376 FRHKFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMIIPYVPMLVPPKRWKGYDKG 435 Query: 1412 GYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWA 1591 GYLFLPSY+MRTHGS++QQDA+R + K +V+EALDTLGNTKWRVNR+IL+VVE LWA Sbjct: 436 GYLFLPSYIMRTHGSKKQQDALRDISSKTAHRVFEALDTLGNTKWRVNRKILDVVERLWA 495 Query: 1592 AGGDIAGLVNRKNVPIPEL-LSDDEKEIXXXXXXXXXXXXINQERHSQRCDVELKLSVAR 1768 GG+IAGLVNR++VPIPE S+D +E+ IN+ERHS RCDVELKLSVAR Sbjct: 496 DGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSVRKANKINRERHSLRCDVELKLSVAR 555 Query: 1769 NMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLA 1948 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLA Sbjct: 556 KMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLA 615 Query: 1949 NLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEAL 2128 NLY GGVEKLS+DAR++FVE ++ +++DSA+N ++G RWWLKAEDPFQCLAAC+ L++AL Sbjct: 616 NLYAGGVEKLSHDARLAFVETHLDDVMDSAENPIHGKRWWLKAEDPFQCLAACVILTQAL 675 Query: 2129 KSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHI 2308 KS SP++VISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH Sbjct: 676 KSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHE 735 Query: 2309 IMKRDSEKDPETDPNALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGL 2488 IMK+DS KDPE++P A LAK+LI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+ Sbjct: 736 IMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGV 795 Query: 2489 ISDDKLLFSASCYAARVTMAALEELFQAARAIMGWLGDCAKIIGQENHPVRWTTPLGLPV 2668 I+D+++LF+A+CY+A+VT+AAL E+F+AARAIM WLGDCAKII +NHPVRW TPLGLPV Sbjct: 796 ITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPV 855 Query: 2669 VQPYFKSQRHVIKTSLQVLALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNA 2848 VQPY +S+RH+I+TSLQVLALQREG+ V+VRKQRTAFPPNFVHSLDGTHMMMTA+ACR A Sbjct: 856 VQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREA 915 Query: 2849 GLRFAGVHDSFWTHACDVDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXXER 3028 GL FAGVHDS+WTHACDVD MN+ILR+KFVELY+ P+LE+LL+SFQ +R Sbjct: 916 GLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKR 975 Query: 3029 GDFDLEKVLESPYFFN 3076 GDFDL++VL+S YFFN Sbjct: 976 GDFDLKEVLKSQYFFN 991