BLASTX nr result
ID: Mentha29_contig00018756
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00018756
(928 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Mor... 264 4e-68
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s... 260 6e-67
gb|EYU46504.1| hypothetical protein MIMGU_mgv1a014157mg [Mimulus... 258 2e-66
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s... 258 3e-66
ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III s... 250 5e-64
ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III s... 248 2e-63
ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III s... 238 2e-60
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype... 238 2e-60
ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-contai... 237 6e-60
ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prun... 236 7e-60
ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III s... 226 8e-57
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp.... 226 1e-56
ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containin... 224 5e-56
ref|XP_006396961.1| hypothetical protein EUTSA_v10028967mg [Eutr... 222 1e-55
ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III s... 222 1e-55
ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Caps... 222 2e-55
ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III s... 221 2e-55
ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phas... 213 9e-53
ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III s... 212 2e-52
ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, part... 212 2e-52
>gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
Length = 200
Score = 264 bits (674), Expect = 4e-68
Identities = 123/194 (63%), Positives = 152/194 (78%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS IEHT +AIK +L+ +FLDKVI LGLC+SVYD++SI+GGFIF
Sbjct: 1 MFYLSRIEHTLRVPPDILSRPLTEAIKVELEKLFLDKVIANLGLCISVYDIISIEGGFIF 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGA+TYT F ++MFRPFVGEII+A++KES + LRL+LGFFEDIYIP FL P+R
Sbjct: 61 PGDGAATYTAVFTMIMFRPFVGEIISAKVKESDANGLRLTLGFFEDIYIPANFLPDPSRP 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMVVT 239
EPDP DRVTWIW + ++ Y +DGEDEIRF+VHSV+YPP+P+EQP+E KPFAPMV+T
Sbjct: 121 EPDPRKRDRVTWIWEFGEQKYVIDGEDEIRFQVHSVNYPPIPVEQPKES--KPFAPMVIT 178
Query: 238 GTLDMDGLGPTSWW 197
G+LD DGLGP SWW
Sbjct: 179 GSLDCDGLGPVSWW 192
>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 260 bits (664), Expect = 6e-67
Identities = 124/194 (63%), Positives = 152/194 (78%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MFFLS IEHT +AIKG+L+S+FLDKV+ LGLC+SVYD+ SIDGGF+F
Sbjct: 1 MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGASTYTV+FRLVMFRPFVGEIITA+LKES + L+LSLGFF+DIYIPV + +P
Sbjct: 61 PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMVVT 239
EPDP N +V WIW+Y ++ + +DG DEIRF+V SVSYPP+P+EQP+E KPFAPM++
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVEQPKES--KPFAPMMIM 178
Query: 238 GTLDMDGLGPTSWW 197
G+LD DGLGP SWW
Sbjct: 179 GSLDYDGLGPVSWW 192
>gb|EYU46504.1| hypothetical protein MIMGU_mgv1a014157mg [Mimulus guttatus]
Length = 199
Score = 258 bits (660), Expect = 2e-66
Identities = 127/199 (63%), Positives = 148/199 (74%), Gaps = 5/199 (2%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MFFLSE+EH+ AIKG+L+S+FLD VIDKLGLC+SVYD+ SIDGGFIF
Sbjct: 1 MFFLSELEHSLRLPPHLLNQPLDKAIKGELESLFLDTVIDKLGLCISVYDIRSIDGGFIF 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P GASTYTVKFRLVMFRPF+GE+I+ARLKEST LRLSLGFF+DIY+ V L +PN
Sbjct: 61 PGHGASTYTVKFRLVMFRPFLGEVISARLKESTTSGLRLSLGFFDDIYVYVPLLPAPNDY 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQ-----PEEKDVKPFA 254
PDP D V W WNY + +D DEIRFKVHSV+Y P+P+EQ PE+KD KPFA
Sbjct: 121 APDPSRKDGVIWSWNYHADPLTIDWTDEIRFKVHSVNYHPIPVEQGDDDDPEKKDSKPFA 180
Query: 253 PMVVTGTLDMDGLGPTSWW 197
PMVV G++D DGLGP SWW
Sbjct: 181 PMVVIGSIDDDGLGPVSWW 199
>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 258 bits (658), Expect = 3e-66
Identities = 124/194 (63%), Positives = 151/194 (77%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS IEHT +AIKG+L+S+FLDKVI LGLC+SVYD+ SIDGGF+F
Sbjct: 1 MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGASTYTV+FRLVMFRPFVGEIITA+LKES + LRLSLGFF+DIYIPV + +P
Sbjct: 61 PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMVVT 239
EP+P +V WIW+Y ++ + +DG DEIRF+V SVSYPP+P+EQP+E KPFAPMV+
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKES--KPFAPMVIM 178
Query: 238 GTLDMDGLGPTSWW 197
G+LD DGLGP SWW
Sbjct: 179 GSLDYDGLGPVSWW 192
>ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Solanum tuberosum]
Length = 193
Score = 250 bits (639), Expect = 5e-64
Identities = 119/194 (61%), Positives = 148/194 (76%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LSEIEH +AIKG+L+ +F+DKVI LGL +S+YD+ SID GFI+
Sbjct: 1 MFYLSEIEHKLRLPPHLLNLPLNEAIKGELEGLFVDKVIANLGLIISIYDIRSIDDGFIY 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
PS+GASTYTVKFRLV+FRPFVGE+ITA+LKES + LRLSLGFF+DIY+P L P+R
Sbjct: 61 PSEGASTYTVKFRLVVFRPFVGEVITAKLKESKAEGLRLSLGFFDDIYVPAPLLPDPSRS 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMVVT 239
PDP N ++V WIW + + DY +DG DEIRF+VH+VSYP +PLEQ +KD PFAPMV+
Sbjct: 121 APDPENKNQVRWIWKFDELDYPIDGVDEIRFQVHNVSYPSMPLEQ--DKDSNPFAPMVIK 178
Query: 238 GTLDMDGLGPTSWW 197
G+LD DGLGP SWW
Sbjct: 179 GSLDADGLGPISWW 192
>ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Solanum lycopersicum]
Length = 193
Score = 248 bits (634), Expect = 2e-63
Identities = 117/194 (60%), Positives = 149/194 (76%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS +EHT +AIKG+L+ +F+DKVI LGL +S+YD+ S+D GFI+
Sbjct: 1 MFYLSVLEHTLRLPPHLLNLPLNEAIKGELEGLFVDKVIANLGLGISIYDIRSVDDGFIY 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
PS+GASTY VKFRLV+FRPFVGE+I+A+LKES + LRLSLGFF+DIY+P L P+R
Sbjct: 61 PSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRLSLGFFDDIYVPAPLLPDPSRS 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMVVT 239
EPDP N ++V WIW + + DY +DG DEIRF+VH+VSYP +PLEQ +KD KPFAPMV+
Sbjct: 121 EPDPENKNQVRWIWKFDELDYPIDGIDEIRFQVHNVSYPSMPLEQ--DKDSKPFAPMVIK 178
Query: 238 GTLDMDGLGPTSWW 197
G+LD DGLGP SWW
Sbjct: 179 GSLDADGLGPISWW 192
>ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Citrus sinensis]
gi|568851835|ref|XP_006479591.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like isoform X2 [Citrus
sinensis]
Length = 192
Score = 238 bits (608), Expect = 2e-60
Identities = 114/194 (58%), Positives = 144/194 (74%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS+IEHT +AIK +L+++FLDKVI LGLC+S+YD+ I+GGF++
Sbjct: 1 MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P +GAST+TVKFRLV+FRPFVGEII A+LKES + LRLSLGFFEDIY+P L SP+R
Sbjct: 61 PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMVVT 239
EPDP V WIW + D Y +DG DEI+F+V SV+YP +P+EQ E KPFAPMV+
Sbjct: 121 EPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSIPIEQAEGS--KPFAPMVIN 178
Query: 238 GTLDMDGLGPTSWW 197
G++D DGLGP SWW
Sbjct: 179 GSIDYDGLGPVSWW 192
>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
[Ricinus communis] gi|223539824|gb|EEF41404.1|
DNA-directed RNA polymerase III 25 kD polypeptide,
putative [Ricinus communis]
Length = 194
Score = 238 bits (608), Expect = 2e-60
Identities = 120/198 (60%), Positives = 144/198 (72%), Gaps = 4/198 (2%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LSEIEHT DA+K +L+ IFLDKVI LGLC+SVYDV IDGGFIF
Sbjct: 1 MFYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIF 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGASTYTV+FR+V+FRPFVGEII A+LKES D LRLSLGFF+DIYIP L P+
Sbjct: 61 PGDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYS 120
Query: 418 EPDPGNSDRVTWIWNYMDED----YAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAP 251
+ DP N + WIW ++ ED + +DG DEI+F+V SV YPP+PLEQ E KPFAP
Sbjct: 121 QQDPENRYQAIWIWEFVSEDNKMEFNIDGLDEIKFRVDSVKYPPVPLEQQE----KPFAP 176
Query: 250 MVVTGTLDMDGLGPTSWW 197
MV+TG++D +GLGP SWW
Sbjct: 177 MVITGSIDDEGLGPVSWW 194
>ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
cacao] gi|508702675|gb|EOX94571.1| RNA polymerase Rpb7
N-terminal domain-containing protein [Theobroma cacao]
Length = 210
Score = 237 bits (604), Expect = 6e-60
Identities = 117/202 (57%), Positives = 148/202 (73%), Gaps = 8/202 (3%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS IEHT +AIK +L+++FLDKVI LGLC+SVYD+ SI GGFI+
Sbjct: 1 MFYLSLIEHTLRLPPHLLNLPLDEAIKIELEALFLDKVIANLGLCISVYDIRSIKGGFIY 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGASTYTV+FRL++FRPFVGEII A+LKES + LRLSLGFF+DIYIPV L P+R
Sbjct: 61 PGDGASTYTVEFRLIVFRPFVGEIIVAKLKESDANGLRLSLGFFDDIYIPVHLLPIPSRF 120
Query: 418 EPDPGNSDRVTWIWNYMDED--------YAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVK 263
E DP N ++ WIW++ + + + +DG D+I+F+VHSV YP +PLEQPE K
Sbjct: 121 ESDPNNRNQGRWIWDFGEAEEAQSEEPRFVIDGMDQIKFRVHSVIYPSIPLEQPENS--K 178
Query: 262 PFAPMVVTGTLDMDGLGPTSWW 197
PFAPMV+TG++D DGLGP SWW
Sbjct: 179 PFAPMVITGSIDYDGLGPVSWW 200
>ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prunus persica]
gi|462414878|gb|EMJ19615.1| hypothetical protein
PRUPE_ppa011518mg [Prunus persica]
Length = 207
Score = 236 bits (603), Expect = 7e-60
Identities = 114/196 (58%), Positives = 144/196 (73%), Gaps = 2/196 (1%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS IEHT DA++G+L+ +FLDKVI LGLC+SV+ + SI GFI
Sbjct: 1 MFYLSRIEHTLRLPPHLLSLRLEDAVRGELEKLFLDKVIANLGLCISVHSIQSIKDGFIL 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P+DG T+ V+F L+MFRPFVGEII A+LKEST + LRLSL FF+DIY+PV L P+
Sbjct: 61 PNDGHPTFRVEFTLIMFRPFVGEIIVAKLKESTANGLRLSLEFFDDIYVPVHLLPVPSHS 120
Query: 418 EPDPGNSDRVTWIWNY--MDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMV 245
PDPG DRV WIW + DE+ +DG D+I+F+VHSV++PP+P+EQPE D KPFAPMV
Sbjct: 121 VPDPGKRDRVMWIWKFPDSDEELVIDGIDQIKFQVHSVNFPPIPIEQPE--DSKPFAPMV 178
Query: 244 VTGTLDMDGLGPTSWW 197
VTG++D DGLGP SWW
Sbjct: 179 VTGSIDFDGLGPVSWW 194
>ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Cicer
arietinum]
Length = 196
Score = 226 bits (577), Expect = 8e-57
Identities = 113/198 (57%), Positives = 140/198 (70%), Gaps = 4/198 (2%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS IEH DAI +L+ +FLDKVI LGLC VYD++SI+GGFIF
Sbjct: 1 MFYLSRIEHKLRLPPSLLSLPIRDAIHTELEKLFLDKVIANLGLCTCVYDIISIEGGFIF 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGA TYTV F L+MFRP +GEIITA+L S D LRLSLGFF+DIYIP + +P+
Sbjct: 61 PGDGAPTYTVVFNLIMFRPIMGEIITAKLHSSDADGLRLSLGFFDDIYIPTHHMPNPSHF 120
Query: 418 EPDPGNSDR-VTWIWNYMDED---YAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAP 251
+P PG S++ V W W+Y E+ Y +D DEI+F+V SVSYPP+P+EQP+E KPFAP
Sbjct: 121 DPIPGKSNKSVVWFWDYKKEEGLSYPIDSSDEIKFQVQSVSYPPIPVEQPKES--KPFAP 178
Query: 250 MVVTGTLDMDGLGPTSWW 197
M+V G+LD DGLGP SWW
Sbjct: 179 MLVYGSLDQDGLGPVSWW 196
>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335460|gb|EFH65877.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 226 bits (576), Expect = 1e-56
Identities = 108/196 (55%), Positives = 140/196 (71%), Gaps = 2/196 (1%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LSE+EH+ DAIK L ++FLDKV+ LGLCVSVYD+ SI+GGF+
Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVL 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGA+TY V FR+V+FRPFVGE+I A+ KES + LRL+LGFF+DIY+P + PNR
Sbjct: 61 PGDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRC 120
Query: 418 EPDPGNSDRVTWIWNYMD--EDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMV 245
EPDP N ++ W+W Y + ED+ +D +I+F+V S+SYP +P E+ E D KPFAPMV
Sbjct: 121 EPDPYNRKQMIWVWEYGEPLEDFIIDDSCQIKFRVESISYPSVPTERAE--DAKPFAPMV 178
Query: 244 VTGTLDMDGLGPTSWW 197
VTG +D DGLGP SWW
Sbjct: 179 VTGNMDEDGLGPVSWW 194
>ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containing protein
[Arabidopsis thaliana]
gi|7523702|gb|AAF63141.1|AC011001_11 hypothetical
protein [Arabidopsis thaliana]
gi|17529108|gb|AAL38764.1| putative RNA polymerase
[Arabidopsis thaliana] gi|23296904|gb|AAN13199.1|
putative RNA polymerase [Arabidopsis thaliana]
gi|332189917|gb|AEE28038.1| RNA polymerase Rpb7
N-terminal domain-containing protein [Arabidopsis
thaliana]
Length = 204
Score = 224 bits (570), Expect = 5e-56
Identities = 107/196 (54%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LSE+EH+ DAIK L ++FLDKV+ LGLCVS+YD+ S++GGF+
Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVL 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGA+TY V R+V+FRPFVGE+I A+ KES + LRL+LGFF+DIY+P + PNR
Sbjct: 61 PGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRC 120
Query: 418 EPDPGNSDRVTWIWNYMD--EDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMV 245
EPDP N ++ W+W Y + EDY VD +I+F+V S+SYP +P E+ E D KPFAPMV
Sbjct: 121 EPDPYNRKQMIWVWEYGEPKEDYIVDDACQIKFRVESISYPSVPTERAE--DAKPFAPMV 178
Query: 244 VTGTLDMDGLGPTSWW 197
VTG +D DGLGP SWW
Sbjct: 179 VTGNMDDDGLGPVSWW 194
>ref|XP_006396961.1| hypothetical protein EUTSA_v10028967mg [Eutrema salsugineum]
gi|557097978|gb|ESQ38414.1| hypothetical protein
EUTSA_v10028967mg [Eutrema salsugineum]
Length = 204
Score = 222 bits (566), Expect = 1e-55
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 2/196 (1%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF LSE+EHT DAIK L ++FLDKV+ LGLCVS+YD+ S++GGF+
Sbjct: 1 MFTLSELEHTLRVPPHLLNHPLEDAIKSVLQNLFLDKVLADLGLCVSIYDIRSVEGGFVL 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGA+TY V+FR+V+FRPFV E+I A+ KES + LRL+LGFFEDIY+P + +PNR
Sbjct: 61 PGDGAATYKVRFRMVVFRPFVTEVIAAKFKESDANGLRLTLGFFEDIYVPAPLIPTPNRC 120
Query: 418 EPDPGNSDRVTWIWNYMD--EDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMV 245
EPDP N +++ W+W + + EDY +D +I+F+V S+SYP +P+E+ E KPFAPMV
Sbjct: 121 EPDPYNRNQMRWVWEFGEPKEDYIIDDSCQIKFRVESISYPTVPIERTEGS--KPFAPMV 178
Query: 244 VTGTLDMDGLGPTSWW 197
+TG +D DGLGP SWW
Sbjct: 179 ITGNIDDDGLGPVSWW 194
>ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Cucumis sativus] gi|449523449|ref|XP_004168736.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC8-like [Cucumis sativus]
Length = 226
Score = 222 bits (566), Expect = 1e-55
Identities = 106/208 (50%), Positives = 140/208 (67%), Gaps = 14/208 (6%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS IEHT DAIKG+L+ +F+DKV+ LGLC+SVYD+ S+DGGFIF
Sbjct: 1 MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIF 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
PSDGA+TY V F L++FRPF GE+I +++ES ++ LR+SLGFFEDIY+PV + S +
Sbjct: 61 PSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRISLGFFEDIYVPVELMPSGSEF 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEK----------- 272
PD N R W+W Y + + + DEI+FKVHS+ YP + +EQP+E
Sbjct: 121 TPDENNGGRCRWVWIYNEVPFDIYESDEIKFKVHSIEYPAILVEQPKESNSKFPMEEKPK 180
Query: 271 ---DVKPFAPMVVTGTLDMDGLGPTSWW 197
+VKPFAPMV+T +LD DGLGP SWW
Sbjct: 181 ESINVKPFAPMVITASLDQDGLGPVSWW 208
>ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Capsella rubella]
gi|482574626|gb|EOA38813.1| hypothetical protein
CARUB_v10011131mg [Capsella rubella]
Length = 199
Score = 222 bits (565), Expect = 2e-55
Identities = 105/197 (53%), Positives = 140/197 (71%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LSE+EH+ DAIK L ++FLDKV+ LGLCVSVYD+ SI+GG +
Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLVDLGLCVSVYDIKSIEGGIVL 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P DGA+TY V FR+V+FRPFVGE+I A+ KES + LRL+LGFFEDIY+PV + +PNR
Sbjct: 61 PGDGAATYKVVFRIVVFRPFVGEVIAAKFKESDTNGLRLTLGFFEDIYVPVPLIPTPNRC 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMVVT 239
EPDP N ++ W+W + ++Y +D +I+F+V +SYP +P+E+ E D KPFAPMV+T
Sbjct: 121 EPDPYNRKQMRWVWVFEGQEYIIDDSCQIKFRVEGISYPSVPIERAE--DAKPFAPMVIT 178
Query: 238 GTLDMDGLGPTSWWG*F 188
G +D DGLG SWW F
Sbjct: 179 GNIDDDGLGLVSWWDSF 195
>ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Cicer arietinum]
gi|502172669|ref|XP_004515172.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like isoform X2 [Cicer
arietinum]
Length = 196
Score = 221 bits (564), Expect = 2e-55
Identities = 111/198 (56%), Positives = 139/198 (70%), Gaps = 4/198 (2%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS IEH DAI +L+ +FLDKVI LGLC VYD++SI+GGFIF
Sbjct: 1 MFYLSRIEHKLRLPPSLLSLPIRDAIHMELEKLFLDKVIANLGLCTCVYDIISIEGGFIF 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
DGA TYTV F L+MFRP +GEIITA+L S D LRLSLGFF+DIYIP + +P+
Sbjct: 61 AGDGAPTYTVVFNLIMFRPIMGEIITAKLHSSDADGLRLSLGFFDDIYIPTHHMPNPSHF 120
Query: 418 EPDPGNSDR-VTWIWNYMDED---YAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAP 251
+P PG S++ V W W++ E+ Y +D DEI+F+V SVSYPP+P+EQP+E KPFAP
Sbjct: 121 DPMPGKSNKSVVWFWDFKKEEGLSYPIDSSDEIKFQVQSVSYPPIPVEQPKES--KPFAP 178
Query: 250 MVVTGTLDMDGLGPTSWW 197
M+V G+LD DGLGP SWW
Sbjct: 179 MLVYGSLDQDGLGPVSWW 196
>ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phaseolus vulgaris]
gi|561007160|gb|ESW06109.1| hypothetical protein
PHAVU_010G020200g [Phaseolus vulgaris]
Length = 215
Score = 213 bits (542), Expect = 9e-53
Identities = 107/207 (51%), Positives = 137/207 (66%), Gaps = 13/207 (6%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS+IEH +AI +L+ +FLDKVI +GLC+SVYD+ SIDGGFIF
Sbjct: 1 MFYLSKIEHKLPLPPSRLVLPIREAIHMELEKLFLDKVIANVGLCISVYDIRSIDGGFIF 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNR- 422
P DGA TYTV F L+MFRPFVGEIITARL S D LRL+LGFFEDIY+P + PN
Sbjct: 61 PGDGAPTYTVVFNLIMFRPFVGEIITARLISSDSDGLRLTLGFFEDIYVPAHHMPYPNHF 120
Query: 421 ------------QEPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPE 278
+E + + W W++ +++Y + D I+F+V +VSYP +P+EQP+
Sbjct: 121 VEDEQGKRVSSSEESTTNSVRKGVWYWDFNEQEYPIQETDVIKFRVQNVSYPQIPVEQPK 180
Query: 277 EKDVKPFAPMVVTGTLDMDGLGPTSWW 197
E KPFAPM+VTG+LD DGLGP SWW
Sbjct: 181 ES--KPFAPMLVTGSLDHDGLGPVSWW 205
>ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X3 [Citrus sinensis]
Length = 187
Score = 212 bits (539), Expect = 2e-52
Identities = 104/179 (58%), Positives = 132/179 (73%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS+IEHT +AIK +L+++FLDKVI LGLC+S+YD+ I+GGF++
Sbjct: 1 MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P +GAST+TVKFRLV+FRPFVGEII A+LKES + LRLSLGFFEDIY+P L SP+R
Sbjct: 61 PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMVV 242
EPDP V WIW + D Y +DG DEI+F+V SV+YP +P+EQ E KPFAPMV+
Sbjct: 121 EPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSIPIEQAEGS--KPFAPMVI 177
>ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, partial [Citrus clementina]
gi|557546175|gb|ESR57153.1| hypothetical protein
CICLE_v10023915mg, partial [Citrus clementina]
Length = 178
Score = 212 bits (539), Expect = 2e-52
Identities = 104/179 (58%), Positives = 132/179 (73%)
Frame = -1
Query: 778 MFFLSEIEHTXXXXXXXXXXXXXDAIKGQLDSIFLDKVIDKLGLCVSVYDVLSIDGGFIF 599
MF+LS+IEHT +AIK +L+++FLDKVI LGLC+S+YD+ I+GGF++
Sbjct: 1 MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60
Query: 598 PSDGASTYTVKFRLVMFRPFVGEIITARLKESTKDVLRLSLGFFEDIYIPVLFLFSPNRQ 419
P +GAST+TVKFRLV+FRPFVGEII A+LKES + LRLSLGFFEDIY+P L SP+R
Sbjct: 61 PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120
Query: 418 EPDPGNSDRVTWIWNYMDEDYAVDGEDEIRFKVHSVSYPPLPLEQPEEKDVKPFAPMVV 242
EPDP V WIW + D Y +DG DEI+F+V SV+YP +P+EQ E KPFAPMV+
Sbjct: 121 EPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSIPIEQAEGS--KPFAPMVI 177