BLASTX nr result
ID: Mentha29_contig00017830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00017830
(243 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlise... 87 2e-15
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 80 2e-13
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 80 2e-13
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 69 9e-10
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 67 3e-09
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 66 6e-09
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc... 64 2e-08
ref|XP_006452719.1| hypothetical protein CICLE_v10007802mg [Citr... 64 3e-08
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr... 64 3e-08
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr... 64 3e-08
ref|XP_006452716.1| hypothetical protein CICLE_v10007802mg [Citr... 64 3e-08
ref|XP_006452715.1| hypothetical protein CICLE_v10007802mg [Citr... 64 3e-08
ref|XP_004972833.1| PREDICTED: probable RNA polymerase II transc... 61 2e-07
ref|XP_004972830.1| PREDICTED: probable RNA polymerase II transc... 60 2e-07
ref|XP_004972829.1| PREDICTED: probable RNA polymerase II transc... 60 2e-07
gb|EMT16379.1| hypothetical protein F775_52194 [Aegilops tauschii] 59 5e-07
gb|EMS48309.1| hypothetical protein TRIUR3_27691 [Triticum urartu] 58 2e-06
gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays] 58 2e-06
gb|AFW61224.1| BSD domain containing protein [Zea mays] 58 2e-06
ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 58 2e-06
>gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlisea aurea]
Length = 281
Score = 87.0 bits (214), Expect = 2e-15
Identities = 53/84 (63%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
Frame = -3
Query: 238 HKFTKEGS-KQALLNLIQHQGGNYIFE---FADHEECREFVARAIACCTEGGGAVPE-IN 74
HKFTKEGS KQA+LNL QGGNYIFE F D + CREFVA AIA E G +V E ++
Sbjct: 55 HKFTKEGSSKQAMLNLTMEQGGNYIFEFECFPDRDACREFVANAIALHAEPGKSVAERVD 114
Query: 73 APPQVNKQQLSEAETERRIKLLQE 2
AP +QLS AE ERRIKLLQE
Sbjct: 115 AP--ATGEQLSRAELERRIKLLQE 136
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum tuberosum]
Length = 599
Score = 80.5 bits (197), Expect = 2e-13
Identities = 49/83 (59%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
Frame = -3
Query: 238 HKFTKE-GSKQALLNLIQHQGGNYIFE---FADHEECREFVARAIACCTEGGGAVPEINA 71
HK +KE SKQALLNL Q QGGNY+FE F D ++CR+FVA AIA C E G A E A
Sbjct: 55 HKSSKECSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPA 114
Query: 70 PPQVNKQQLSEAETERRIKLLQE 2
P + +QLS E RRIKLLQE
Sbjct: 115 VP--HDEQLSATEMGRRIKLLQE 135
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum lycopersicum]
Length = 599
Score = 80.5 bits (197), Expect = 2e-13
Identities = 49/83 (59%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
Frame = -3
Query: 238 HKFTKE-GSKQALLNLIQHQGGNYIFE---FADHEECREFVARAIACCTEGGGAVPEINA 71
HK +KE SKQALLNL Q QGGNY+FE F D ++CR+FVA AIA C E G A E A
Sbjct: 55 HKSSKECSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPA 114
Query: 70 PPQVNKQQLSEAETERRIKLLQE 2
P + +QLS E RRIKLLQE
Sbjct: 115 VP--HDEQLSATEMGRRIKLLQE 135
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 68.6 bits (166), Expect = 9e-10
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Frame = -3
Query: 238 HKFTKEGSKQALLNLIQHQGGNYIFEFA---DHEECREFVARAIA---CCTEGGGAVPEI 77
HKF+KEGSKQALLNL Q +GG Y+FEFA D + CR+ V R + C + +
Sbjct: 56 HKFSKEGSKQALLNLTQDKGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQSAQVV 115
Query: 76 NAPPQV-NKQQLSEAETERRIKLLQE 2
A P + QLS AE E+R+ LL+E
Sbjct: 116 PAQPTTQHDNQLSMAEMEQRMNLLRE 141
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Vitis vinifera]
gi|296090002|emb|CBI39821.3| unnamed protein product
[Vitis vinifera]
Length = 602
Score = 67.0 bits (162), Expect = 3e-09
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Frame = -3
Query: 238 HKFTKEGS-KQALLNLIQ--HQGGNYIFEFA---DHEECREFVARAIACCTEGGGAVPEI 77
HKF+K GS K ALLNL Q +GG YIFEF D E CREFV RA+A +E A E
Sbjct: 54 HKFSKGGSNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQ 113
Query: 76 NAPPQVNKQQLSEAETERRIKLLQE 2
+A ++ +QLS E ERRIKLL+E
Sbjct: 114 SA-VKLFDEQLSTIEMERRIKLLRE 137
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 65.9 bits (159), Expect = 6e-09
Identities = 45/85 (52%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Frame = -3
Query: 238 HKFTKEGS-KQALLNLIQ--HQGGNYIFEFA---DHEECREFVARAIACCTEGGGAVPEI 77
HKF+K GS K ALLNL Q +GG YIFEF D E CREFV +A+A +E A E
Sbjct: 54 HKFSKGGSNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGKALAKFSEASKAGSEQ 113
Query: 76 NAPPQVNKQQLSEAETERRIKLLQE 2
+A ++ +QLS E ERRIKLL+E
Sbjct: 114 SA-VKLFDEQLSTIEMERRIKLLRE 137
>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Citrus sinensis]
Length = 597
Score = 64.3 bits (155), Expect = 2e-08
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = -3
Query: 238 HKFTKEGS-KQALLNLIQHQGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEINA 71
HK+TKEGS K L+NL QGG+YIFEF AD CR+FV++ + E A E +A
Sbjct: 56 HKYTKEGSNKPPLINLANAQGGSYIFEFDSYADLHVCRDFVSKVLEKSKETPNAALEKSA 115
Query: 70 PPQVNKQQLSEAETERRIKLLQE 2
++ +QLSE E + RIKLLQE
Sbjct: 116 -IKLPDEQLSEEEMQLRIKLLQE 137
>ref|XP_006452719.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555945|gb|ESR65959.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 557
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = -3
Query: 238 HKFTKEGS-KQALLNLIQHQGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEINA 71
HK+TKEGS K L+NL QGG+YIFEF +D CR+FV++ + E A E +A
Sbjct: 56 HKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALEKSA 115
Query: 70 PPQVNKQQLSEAETERRIKLLQE 2
++ +QLSE E + RIKLLQE
Sbjct: 116 -VKLPDEQLSEEEMQLRIKLLQE 137
>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555944|gb|ESR65958.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 564
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = -3
Query: 238 HKFTKEGS-KQALLNLIQHQGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEINA 71
HK+TKEGS K L+NL QGG+YIFEF +D CR+FV++ + E A E +A
Sbjct: 23 HKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALEKSA 82
Query: 70 PPQVNKQQLSEAETERRIKLLQE 2
++ +QLSE E + RIKLLQE
Sbjct: 83 -VKLPDEQLSEEEMQLRIKLLQE 104
>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555943|gb|ESR65957.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 597
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = -3
Query: 238 HKFTKEGS-KQALLNLIQHQGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEINA 71
HK+TKEGS K L+NL QGG+YIFEF +D CR+FV++ + E A E +A
Sbjct: 56 HKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALEKSA 115
Query: 70 PPQVNKQQLSEAETERRIKLLQE 2
++ +QLSE E + RIKLLQE
Sbjct: 116 -VKLPDEQLSEEEMQLRIKLLQE 137
>ref|XP_006452716.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555942|gb|ESR65956.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 533
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = -3
Query: 238 HKFTKEGS-KQALLNLIQHQGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEINA 71
HK+TKEGS K L+NL QGG+YIFEF +D CR+FV++ + E A E +A
Sbjct: 56 HKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALEKSA 115
Query: 70 PPQVNKQQLSEAETERRIKLLQE 2
++ +QLSE E + RIKLLQE
Sbjct: 116 -VKLPDEQLSEEEMQLRIKLLQE 137
>ref|XP_006452715.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555941|gb|ESR65955.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 536
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = -3
Query: 238 HKFTKEGS-KQALLNLIQHQGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEINA 71
HK+TKEGS K L+NL QGG+YIFEF +D CR+FV++ + E A E +A
Sbjct: 56 HKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALEKSA 115
Query: 70 PPQVNKQQLSEAETERRIKLLQE 2
++ +QLSE E + RIKLLQE
Sbjct: 116 -VKLPDEQLSEEEMQLRIKLLQE 137
>ref|XP_004972833.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Setaria italica]
Length = 604
Score = 60.8 bits (146), Expect = 2e-07
Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Frame = -3
Query: 238 HKFTKEGSKQA--LLNLIQH--QGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPE 80
HKF GSKQA LL L + +GG+Y+FEF AD ++CR+F+AR + G P
Sbjct: 64 HKF---GSKQARSLLKLCRDPGEGGDYMFEFDNVADRDQCRDFIARVLG--QHQGTIPPR 118
Query: 79 INAPPQ----VNKQQLSEAETERRIKLLQE 2
N PP+ +QLS AE ERR+KLLQE
Sbjct: 119 PNVPPESVASTGLEQLSAAEVERRMKLLQE 148
>ref|XP_004972830.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like isoform X2 [Setaria italica]
Length = 476
Score = 60.5 bits (145), Expect = 2e-07
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Frame = -3
Query: 238 HKFTK-EGSKQALLNLIQH--QGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEI 77
HKF K +G+K ALLNL + +GG Y+FEF + + CR+FVAR + + G P
Sbjct: 53 HKFNKVDGNKPALLNLSKDSDKGGGYMFEFDNVGNRDLCRDFVARVLG---KHQGMPPRP 109
Query: 76 NAPPQVN-----KQQLSEAETERRIKLLQE 2
PP+++ +QLS AE ERR+KLL+E
Sbjct: 110 TMPPEISVPSAGMEQLSAAEVERRVKLLRE 139
>ref|XP_004972829.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like isoform X1 [Setaria italica]
Length = 600
Score = 60.5 bits (145), Expect = 2e-07
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Frame = -3
Query: 238 HKFTK-EGSKQALLNLIQH--QGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEI 77
HKF K +G+K ALLNL + +GG Y+FEF + + CR+FVAR + + G P
Sbjct: 53 HKFNKVDGNKPALLNLSKDSDKGGGYMFEFDNVGNRDLCRDFVARVLG---KHQGMPPRP 109
Query: 76 NAPPQVN-----KQQLSEAETERRIKLLQE 2
PP+++ +QLS AE ERR+KLL+E
Sbjct: 110 TMPPEISVPSAGMEQLSAAEVERRVKLLRE 139
>gb|EMT16379.1| hypothetical protein F775_52194 [Aegilops tauschii]
Length = 772
Score = 59.3 bits (142), Expect = 5e-07
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 14/93 (15%)
Frame = -3
Query: 238 HKFTK-EGSKQ--ALLNLIQH--QGGNYIFEF---ADHEECREFVARAIACCTEGGGAVP 83
HKF K +GSK ALLNL + +GG YIFEF A+ + CR+FVAR + + G VP
Sbjct: 104 HKFNKVDGSKPSPALLNLSKDSDKGGGYIFEFENVANRDLCRDFVARVLG---KHQGTVP 160
Query: 82 -EINAPPQVNK-----QQLSEAETERRIKLLQE 2
N PP+++ +QLS AE ERR+KLL+E
Sbjct: 161 ARPNVPPEISAVSTGPEQLSSAEMERRMKLLRE 193
>gb|EMS48309.1| hypothetical protein TRIUR3_27691 [Triticum urartu]
Length = 592
Score = 57.8 bits (138), Expect = 2e-06
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 14/93 (15%)
Frame = -3
Query: 238 HKFTK-EGSKQ--ALLNLIQH--QGGNYIFEF---ADHEECREFVARAIACCTEGGGAVP 83
HKF K +GSK ALLNL + +GG YIFEF + + CR+FVAR + + G VP
Sbjct: 53 HKFNKVDGSKPTPALLNLSKDSDKGGGYIFEFENVGNRDLCRDFVARVLG---KHQGTVP 109
Query: 82 -EINAPPQVNK-----QQLSEAETERRIKLLQE 2
N PP+++ +QLS AE ERR+KLL+E
Sbjct: 110 ARPNVPPEISAVSTGPEQLSSAEMERRMKLLRE 142
>gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]
Length = 476
Score = 57.8 bits (138), Expect = 2e-06
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Frame = -3
Query: 238 HKFTK-EGSKQALLNLIQH-QGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEI- 77
HKF K EG+K ALLNL + + G YIFEF + ++CR+FVAR + + G VP
Sbjct: 53 HKFNKVEGNKAALLNLSKEDKAGGYIFEFDNVGNRDQCRDFVARVLG---KHQGIVPPRP 109
Query: 76 -----NAPPQVNKQQLSEAETERRIKLLQE 2
N+ +QLS AE ERR+KLL+E
Sbjct: 110 TVAPENSVASAALEQLSAAEVERRVKLLRE 139
>gb|AFW61224.1| BSD domain containing protein [Zea mays]
Length = 600
Score = 57.8 bits (138), Expect = 2e-06
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Frame = -3
Query: 238 HKFTK-EGSKQALLNLIQH-QGGNYIFEF---ADHEECREFVARAIACCTEGGGAVPEI- 77
HKF K EG+K ALLNL + + G YIFEF + ++CR+FVAR + + G VP
Sbjct: 53 HKFNKVEGNKAALLNLSKEDKAGGYIFEFDNVGNRDQCRDFVARVLG---KHQGIVPPRP 109
Query: 76 -----NAPPQVNKQQLSEAETERRIKLLQE 2
N+ +QLS AE ERR+KLL+E
Sbjct: 110 TVAPENSVASAALEQLSAAEVERRVKLLRE 139
>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
communis] gi|223529828|gb|EEF31761.1| TFIIH basal
transcription factor complex subunit, putative [Ricinus
communis]
Length = 597
Score = 57.8 bits (138), Expect = 2e-06
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Frame = -3
Query: 238 HKFTKEGSKQALLNLIQHQGGNYIFEFADHEE---CREFVARAIACCTEGGGAVPEINAP 68
HK TKEGS +A+LNL +QG +YIFEF +H++ C+E V +A++ G P+
Sbjct: 55 HKNTKEGSAKAMLNLTSNQGVSYIFEFENHDDLRICKEIVGKALSKL----GDTPKPPDA 110
Query: 67 PQVNKQQLSEAETERRIKLLQE 2
P+V Q S E R+ LL+E
Sbjct: 111 PEVPSDQPSTEELLLRMNLLRE 132