BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00017613
         (1257 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi...   354   5e-95
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi...   349   2e-93
gb|EYU27821.1| hypothetical protein MIMGU_mgv1a006926mg [Mimulus...   345   2e-92
ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr...   313   1e-82
ref|XP_007025994.1| Tetratricopeptide repeat-like superfamily pr...   310   8e-82
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   300   1e-78
ref|XP_007212718.1| hypothetical protein PRUPE_ppa018797mg [Prun...   299   2e-78
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   291   4e-76
ref|XP_002305605.1| pentatricopeptide repeat-containing family p...   290   9e-76
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi...   279   2e-72
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps...   224   8e-56
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr...   218   6e-54
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...   210   1e-51
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...   210   1e-51
ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp....   195   3e-47
emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|72689...   184   9e-44
ref|XP_004288209.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-18
ref|XP_006846521.1| hypothetical protein AMTR_s00018p00185360 [A...    97   1e-17
ref|XP_002530223.1| pentatricopeptide repeat-containing protein,...    94   2e-16
ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-16

>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170-like
            isoform X1 [Solanum tuberosum]
            gi|565362693|ref|XP_006348080.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At4g21170-like isoform X2 [Solanum tuberosum]
            gi|565362695|ref|XP_006348081.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At4g21170-like isoform X3 [Solanum tuberosum]
          Length = 584

 Score =  354 bits (908), Expect = 5e-95
 Identities = 176/383 (45%), Positives = 263/383 (68%), Gaps = 2/383 (0%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKF-SSNLTPFTFHQILNRIRTQPKLC 967
            +WR Q  QT+LVSQ S+ILLQR    W SLLK LK  SS  TP  F QIL+  +T P++ 
Sbjct: 29   SWRIQFKQTQLVSQISSILLQRQTNQWPSLLKNLKLCSSQFTPSLFLQILHNTQTNPQVS 88

Query: 966  FDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVA-LFQPR 790
              FF +A+  L F+PD    C L  IL GS L K  KPIL++++  +PPA++V  L Q  
Sbjct: 89   LRFFDYAKNNLGFQPDAKVLCTLVYILLGSGLSKPAKPILDTLIQTYPPAQIVGFLIQSL 148

Query: 789  RNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNEL 610
            +  ++H  S VL+S++ECYC++ ++ ++L+ Y++VR+    +SV+ CN LLNLL+ KNEL
Sbjct: 149  KVGEIHIQSSVLSSVLECYCNKGLFLEALQVYQIVREYGYFVSVNCCNTLLNLLLSKNEL 208

Query: 609  NLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGYS 430
             L WC++ SIIR+GV  N  TWS+IA++L KDGKFE+I  I D GV +  M++ +ID YS
Sbjct: 209  RLGWCYFGSIIRNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYNILIDCYS 268

Query: 429  KRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRTR 250
            +RG+F  AF Y+N++ SK ++P+F+T++SILDGAC+Y + EV E+V+S MV KGH+ +  
Sbjct: 269  ERGNFEAAFGYLNDMYSKCIDPTFNTFSSILDGACKYQNAEVIESVMSSMVEKGHLPKVV 328

Query: 249  ASDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVELY 70
              D+D VI++   +G+ +A +LFF+ A +  ++L++ TY  M  A   +E + EDA+ +Y
Sbjct: 329  LPDYDSVIRRFSDMGKAYAAELFFREAYEKRIKLQDNTYGSMLRA-FSKEGKAEDAIWMY 387

Query: 69   NILQFKKILVSERCYSEFVIALC 1
            NI+  +KI +S++CYS F+  LC
Sbjct: 388  NIIVERKIFISDKCYSAFMSVLC 410


>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170-like
            [Solanum lycopersicum]
          Length = 584

 Score =  349 bits (895), Expect = 2e-93
 Identities = 172/383 (44%), Positives = 261/383 (68%), Gaps = 2/383 (0%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKF-SSNLTPFTFHQILNRIRTQPKLC 967
            +WRTQ  QT+LVSQ S+ILLQR    W  LLK LK  SS  TP  F QIL+  +  P++ 
Sbjct: 29   DWRTQFKQTQLVSQISSILLQRQTNQWPLLLKNLKLCSSQFTPSLFLQILHNTQDNPQVS 88

Query: 966  FDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVA-LFQPR 790
              FF +A+  L F+PD    C L  IL GS L +  KPIL++++  +PPA++V  L Q  
Sbjct: 89   LRFFHYAKNNLGFQPDAKVLCTLVYILLGSGLSRPAKPILDTLIQTYPPAQIVGFLIQSL 148

Query: 789  RNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNEL 610
            +  ++H  S VL+S++ECYC++ ++ ++L+ Y++VR+    +SV+ CN LLNLL+ KN+L
Sbjct: 149  KAGEIHIQSSVLSSVLECYCNKGLFLEALQVYQIVREYGYFVSVNCCNTLLNLLLSKNDL 208

Query: 609  NLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGYS 430
             L WC+Y SIIR+GV  N  TWS+IA++L KDGKFE+I  I D GV +  +++ +ID YS
Sbjct: 209  RLGWCYYGSIIRNGVQENVVTWSLIAQMLCKDGKFEKIVAILDKGVCSPLIYNILIDCYS 268

Query: 429  KRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRTR 250
            +RG F  AF Y+N++ S+ ++P+FST++SILDGAC+Y + +V E+V+S MV KGH+ +  
Sbjct: 269  ERGKFDAAFGYLNDMYSERIDPTFSTFSSILDGACKYQNAQVIESVMSSMVEKGHLPKVV 328

Query: 249  ASDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVELY 70
              D+D VI+K   +G+ +A +LFF+ A + +++L++ TY  M  A   +E + EDA+ +Y
Sbjct: 329  TPDYDSVIQKFSGIGKAYAAELFFREAYEKSIKLQDKTYGSMLRA-FSKEGKAEDAIWMY 387

Query: 69   NILQFKKILVSERCYSEFVIALC 1
            NI+  +KI ++ +CYS F+  LC
Sbjct: 388  NIIVERKIFINGKCYSAFMSVLC 410


>gb|EYU27821.1| hypothetical protein MIMGU_mgv1a006926mg [Mimulus guttatus]
          Length = 426

 Score =  345 bits (885), Expect = 2e-92
 Identities = 159/252 (63%), Positives = 206/252 (81%)
 Frame = -1

Query: 756 LNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNELNLAWCFYASII 577
           +NS++ECYCS++MY QSLE Y M +  R+ LSVD CN LLNLL DKNEL LAWC+YASII
Sbjct: 1   MNSVVECYCSKQMYLQSLEVYHMAKDYRIGLSVDSCNILLNLLGDKNELKLAWCYYASII 60

Query: 576 RDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGYSKRGDFGTAFDY 397
           R+GVS N+ TWS IA+IL+KDGKFERI ++FDVG++T EMFD IIDG+SKRGDF  AFDY
Sbjct: 61  RNGVSGNRFTWSSIARILHKDGKFERISKVFDVGIFTPEMFDLIIDGHSKRGDFEAAFDY 120

Query: 396 VNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRTRASDHDLVIKKL 217
           +N +CSK + PSFSTY+SIL+GAC++ D E+ EN+LS+MV KGHI+ T   D+D ++K+L
Sbjct: 121 LNRMCSKEIGPSFSTYSSILNGACKHQDGEIIENMLSLMVEKGHIAETPVCDYDSIVKEL 180

Query: 216 CAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVELYNILQFKKILVS 37
           C  G+TFAVDLF +RA +  +EL++ TY+CM  ALL EE+R+EDA++LY I++ K IL+S
Sbjct: 181 CDEGKTFAVDLFSERAYEAKIELQHGTYECMLMALLSEEARLEDAIKLYKIVREKNILLS 240

Query: 36  ERCYSEFVIALC 1
           E CYSEFV+ LC
Sbjct: 241 ESCYSEFVVILC 252


>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
            gi|557551699|gb|ESR62328.1| hypothetical protein
            CICLE_v10018367mg [Citrus clementina]
          Length = 578

 Score =  313 bits (802), Expect = 1e-82
 Identities = 161/382 (42%), Positives = 248/382 (64%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFSSNLTPFTFHQILNRIRTQPKLCF 964
            NWRTQI +T+LV Q S+ LLQRH   W SLL+ L  SS LTP  F QIL++ +  P++  
Sbjct: 27   NWRTQIKRTQLVHQISSTLLQRHN--WPSLLQNLHLSSKLTPSLFLQILHKTKHNPQVSL 84

Query: 963  DFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVALFQPRRN 784
            +FF W + +L F+PD+ ++C + R+L GS   +   PIL+S++ +   A V+     +  
Sbjct: 85   NFFYWIKTSLHFEPDLISQCHIIRLLLGSGQTERINPILDSLI-QTHTATVLTHSMIQSC 143

Query: 783  DDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNELNL 604
            +   S S  L+ +++CY  + ++   LE YRM+R      +V  CN LL+ L  +NE+ L
Sbjct: 144  EGRDSQSDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSACNALLDALYRQNEIRL 203

Query: 603  AWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGYSKR 424
            A C Y ++IRDGVS NK TWS++A+IL + GKFE +  + D G+Y+S M++ +ID YSK+
Sbjct: 204  ASCLYGAMIRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 263

Query: 423  GDFGTAFDYVNELCS-KGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRTRA 247
            GDFG AFD +NE+C+ + + P FSTY+SILDG CRY   EV++ ++ +MV K  + +   
Sbjct: 264  GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGGCRYEKTEVSDRIVGLMVEKKLLPKNFL 323

Query: 246  SDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVELYN 67
            S +D VI+KL  +G+T+A ++ FKRA D+ +EL++ TY CM  A L +E RV++ +++Y+
Sbjct: 324  SGNDSVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTYGCMLKA-LSKEGRVKEVIQIYH 382

Query: 66   ILQFKKILVSERCYSEFVIALC 1
            ++  + I V +  Y  FV  LC
Sbjct: 383  LISERGITVKDSDYYAFVNVLC 404


>ref|XP_007025994.1| Tetratricopeptide repeat-like superfamily protein, putative
            [Theobroma cacao] gi|508781360|gb|EOY28616.1|
            Tetratricopeptide repeat-like superfamily protein,
            putative [Theobroma cacao]
          Length = 578

 Score =  310 bits (794), Expect = 8e-82
 Identities = 157/381 (41%), Positives = 249/381 (65%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFSSNLTPFTFHQILNRIRTQPKLCF 964
            +WR QI Q++LVSQ S+ILLQRH   WASLL+ L   S LTP  F QIL++ +  P++  
Sbjct: 28   DWRAQIKQSQLVSQVSSILLQRHN--WASLLRTLNLRSKLTPVLFLQILHKTQHHPQISL 85

Query: 963  DFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVALFQPRRN 784
             FF W +  L FKPD+ ++C + +I+ GS+L +  +P +NS++ +  PA +VA    +  
Sbjct: 86   TFFNWVKTHLGFKPDLKSQCHIIQIVIGSDLCRCVEPAVNSLI-QSHPAPIVADSMIQAC 144

Query: 783  DDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNELNL 604
               +  S  L+S+I+CY    ++ + LE +R +R      SV  CN LL+ L   NE+ L
Sbjct: 145  KGKNFQSSALSSVIKCYSKHGLFMEGLEVFRKMRIHGFTPSVCACNELLDALQRGNEVKL 204

Query: 603  AWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGYSKR 424
            AW F  +++R G+  ++ +WS++A+IL K+GK  ++  + + G+Y SE++D +ID YSK 
Sbjct: 205  AWGFLGAMLRVGIEPDQFSWSLVAQILCKNGKLGKVVGLLEKGIYNSEIYDLVIDFYSKS 264

Query: 423  GDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRTRAS 244
            GDFG AF+ +NE+ ++ ++ SF TY+SILDGAC+Y+D EV   +L +MV K  + R + S
Sbjct: 265  GDFGAAFNRLNEMYNRKVDTSFCTYSSILDGACKYNDGEVIGRILRMMVEKELVPRHQFS 324

Query: 243  DHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVELYNI 64
              DL+I KLC + +T A ++ FK+A D+N+ L N TY  M  A L +E+R+++A+E+  +
Sbjct: 325  KKDLIIPKLCDLRKTHAAEMLFKKACDENIRLRNDTYGSMLKA-LSQEARIDEAIEVCRM 383

Query: 63   LQFKKILVSERCYSEFVIALC 1
            +  ++I+V+E CYS F+ ALC
Sbjct: 384  ILKRRIIVNESCYSAFINALC 404


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  300 bits (767), Expect = 1e-78
 Identities = 157/378 (41%), Positives = 241/378 (63%), Gaps = 1/378 (0%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFSSNLTPFTFHQILNRIRTQPKLCF 964
            +WRT+I Q +LVS+ STILLQR+   W  LL+ L  SS LTPF F QIL++ +T  ++  
Sbjct: 42   SWRTRIQQNQLVSEISTILLQRNN--WIPLLQNLNLSSKLTPFLFFQILHKTQTHAQISL 99

Query: 963  DFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVV-ALFQPRR 787
            +FF WA+  L+F PD+ ++C + ++  GS+LP+  K IL+S++  +P    +  + Q  R
Sbjct: 100  NFFNWAKTNLNFNPDLKSQCHVIQLSLGSDLPRAAKKILDSLIKTYPSNLFLETMVQACR 159

Query: 786  NDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNELN 607
                 S+   LN ++E Y  +  + + LE Y+ +R I    SV  CN LL+ L  ++E+ 
Sbjct: 160  GKS--SLLCTLNFVLEFYSHKGSFLEGLEVYKKMRVIGCTPSVHACNVLLDALQRESEIR 217

Query: 606  LAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGYSK 427
            LAWCFY ++IR GV  +K TWS++A IL KDG FERI ++ D+G+  S M++ ++D YSK
Sbjct: 218  LAWCFYCAMIRVGVLPDKFTWSLVAHILCKDGNFERIVKLLDMGICNSVMYNAVVDYYSK 277

Query: 426  RGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRTRA 247
             GDF  AF  +NE+  + +EP FSTY+SILDGAC+  + +V E V++IMV K  +S+  +
Sbjct: 278  NGDFKAAFCRLNEMYDRKVEPGFSTYSSILDGACKCRNLQVIERVVAIMVGKQLLSKCPS 337

Query: 246  SDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVELYN 67
            SD+D +I+KLC +G+  A  LFFKRA D+ + L++ATY  M  A    E  +E+A+ LY 
Sbjct: 338  SDYDSIIQKLCDLGKVSAATLFFKRACDERIGLQDATYGRMLRAFSI-EGILEEAIGLYQ 396

Query: 66   ILQFKKILVSERCYSEFV 13
            ++  + + + +     FV
Sbjct: 397  VILERGLTIKDNASDAFV 414


>ref|XP_007212718.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
            gi|462408583|gb|EMJ13917.1| hypothetical protein
            PRUPE_ppa018797mg [Prunus persica]
          Length = 584

 Score =  299 bits (765), Expect = 2e-78
 Identities = 152/382 (39%), Positives = 239/382 (62%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFSSNLTPFTFHQILNRIRTQPKLCF 964
            +WRT I Q +L SQ S  LLQR  + W  LL+ L     LTP  F QIL++ +  P++  
Sbjct: 18   SWRTNIKQAQLASQISYALLQR--RNWVPLLRNLSLFPKLTPALFLQILHKTQNNPQVSL 75

Query: 963  DFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVV-ALFQPRR 787
            +FF WA+  L F+PD+ + C++ R+  GS L +  KPIL+S++   P +++V  +    +
Sbjct: 76   EFFNWAKVNLRFEPDLKSNCQIIRVSLGSGLVRPVKPILDSLIQTHPVSELVQCITLACK 135

Query: 786  NDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNELN 607
              D  S S  L+ ++ CY  + ++ + LE +R +  +    SV  CN LLN +  +NE+ 
Sbjct: 136  GTD--SQSTTLSFVLGCYSRKGLFREGLEVFRKMNVLGCVPSVVACNALLNAIQRENEIR 193

Query: 606  LAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGYSK 427
            LAWCFY  +IR+GV  ++ TWS++A+IL KDGKFERI R+ D+ +Y S M++ ++DG SK
Sbjct: 194  LAWCFYGLMIRNGVLPDRFTWSLVAQILCKDGKFERILRLLDLNIYNSMMYNLLVDGCSK 253

Query: 426  RGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRTRA 247
             G+F  AF ++NE+C + ++P FSTY+SILDGAC+  + EV E V S+MV K  +     
Sbjct: 254  SGNFDAAFSHLNEMCDRKVDPDFSTYSSILDGACKLGNVEVVERVTSVMVEKKLLPNCPL 313

Query: 246  SDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVELYN 67
            S++D +++KLC +G+T A ++FFK+A D+ + L++ TY  M  A L  E R ++A+ +Y 
Sbjct: 314  SEYDSIVEKLCDLGKTHAAEMFFKKACDEKIGLQDGTYGLMLKA-LTNEVRTKEAISVYR 372

Query: 66   ILQFKKILVSERCYSEFVIALC 1
            ++  + I+V    Y  F   LC
Sbjct: 373  LISERGIVVDGSSYHAFADVLC 394


>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170-like
            [Vitis vinifera]
          Length = 569

 Score =  291 bits (745), Expect = 4e-76
 Identities = 157/393 (39%), Positives = 241/393 (61%), Gaps = 2/393 (0%)
 Frame = -1

Query: 1173 SKFLREDPTPNWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFSSNLTPFTFHQILN 994
            ++F +     NWR QI Q +L+SQ S+ILLQRH   W +LL+    SS LTP  FHQIL 
Sbjct: 11   NQFSKSTTPLNWRAQIKQNQLISQISSILLQRHN--WVTLLRNFNLSSKLTPSLFHQILL 68

Query: 993  RIRTQPKLCFDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAK 814
            + +  P+    FF W R  L F+PD+ A  ++ RI   S L +  K IL+S++     + 
Sbjct: 69   KTQKNPQSSLSFFNWVRTNLGFQPDLAAHSQIIRISIQSGLFQPAKGILDSLIETQKVSV 128

Query: 813  VV-ALFQPRRNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLL 637
            +V ++ Q  R  D  S SPVL  ++ECY S+ ++ ++LE +R +       SV  CN LL
Sbjct: 129  LVDSVIQACRGKD--SESPVLGFVLECYSSKGLFIEALEVFRRITIHGYVPSVRSCNALL 186

Query: 636  NLLVDKNELNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEM 457
            + L  +NE+ LAWC   ++IR+GV  +   +  IA IL K+GK ER+ R+ D+ +  + +
Sbjct: 187  DSLQRENEIKLAWCVCGALIRNGVLPD---YVRIALILCKNGKLERVVRLLDMSIVCNAL 243

Query: 456  -FDFIIDGYSKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIM 280
             +  +ID Y +RG+F  AF Y+NE+C++  +P F  Y SILDGAC+Y + EV + V+  M
Sbjct: 244  IYKLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAYNSILDGACKYENDEVIQIVMGSM 303

Query: 279  VAKGHISRTRASDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEE 100
            V KG + +   S++D +I+K+C +G+T A  +FFKRAR++ +EL+NATY CM  A L ++
Sbjct: 304  VEKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELDNATYGCMLRA-LAKD 362

Query: 99   SRVEDAVELYNILQFKKILVSERCYSEFVIALC 1
             RV++A+ +Y ++    + V + CY  FV  LC
Sbjct: 363  GRVKEAIGVYLVILESGVTVKDGCYHAFVNVLC 395


>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222848569|gb|EEE86116.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 564

 Score =  290 bits (742), Expect = 9e-76
 Identities = 156/386 (40%), Positives = 240/386 (62%), Gaps = 3/386 (0%)
 Frame = -1

Query: 1161 REDPTPN--WRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFSSNLTPFTFHQILNRI 988
            R +PT +  WR QI Q +LV Q S+ILLQRH   W SLL+    S+ LTP  F+QIL++ 
Sbjct: 5    RANPTTSMKWRIQIRQNQLVFQISSILLQRHN--WVSLLQNFNLSTKLTPPLFNQILHKT 62

Query: 987  RTQPKLCFDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKV- 811
            +T P++   FF W +  L  KPD+ ++C +  I   S L    +PI++S+V     + + 
Sbjct: 63   QTNPQISLRFFNWVQTNLKLKPDLKSQCHIINICVNSGLTLPVRPIMDSLVKTHHVSVLG 122

Query: 810  VALFQPRRNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNL 631
             A+    R   L S     + ++ECY  + ++ +SLE +R +R      S   CN +L++
Sbjct: 123  EAMVDSCRGKSLKS--DAFSFVLECYSHKGLFMESLEMFRKMRGNGFIASGTACNSVLDV 180

Query: 630  LVDKNELNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFD 451
            L  +NE+ LAWCFY ++I+DGV  +K TWS+IA+IL KDG FERI +  D+GVY S +++
Sbjct: 181  LQRENEIKLAWCFYCAMIKDGVLPDKLTWSLIAQILCKDGNFERIVKFLDMGVYNSVLYN 240

Query: 450  FIIDGYSKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAK 271
             +ID  SKRGDF  AF+ +N++C + ++P FSTY++ILDGAC++ + EV E V+ IM  K
Sbjct: 241  GVIDCCSKRGDFEAAFERLNQMCERKLDPGFSTYSAILDGACKHGNEEVIERVMDIMAEK 300

Query: 270  GHISRTRASDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRV 91
            G + +   S  D VI+K   + +     +FF+RA D+ + L++ATY CM  A L +E+RV
Sbjct: 301  GLLPKCPLSQCDSVIQKFSDLCKMNVATMFFRRACDEKIGLQDATYGCMLKA-LSKEARV 359

Query: 90   EDAVELYNILQFKKILVSERCYSEFV 13
            ++A+ LY+++  K I V +  Y  F+
Sbjct: 360  KEAIGLYSLISEKGIRVKDSTYHAFL 385


>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170-like
            [Citrus sinensis]
          Length = 538

 Score =  279 bits (714), Expect = 2e-72
 Identities = 154/382 (40%), Positives = 234/382 (61%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFSSNLTPFTFHQILNRIRTQPKLCF 964
            NWRTQI +T+LV Q S+ LLQRH   W SLL+ L  SS LTP  F QIL++ +  P++  
Sbjct: 27   NWRTQIKRTQLVHQISSTLLQRHN--WPSLLQNLHLSSKLTPSLFLQILHKTKHNPQVSL 84

Query: 963  DFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVALFQPRRN 784
            +FF W + +L F+PD+ ++C + R+L GS   +  KP L+S++                 
Sbjct: 85   NFFYWIKTSLHFEPDLISQCHIIRLLLGSGQTERIKPSLDSLI----------------- 127

Query: 783  DDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNELNL 604
               H+ + + +S+I          QS E             V  CN LL+ L  +NE+ L
Sbjct: 128  -QTHTATVLTHSMI----------QSCE-------------VSACNALLDALYRQNEIRL 163

Query: 603  AWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGYSKR 424
            A C Y +++RDGVS NK TWS++A+IL + GKFE +  + D G+Y+S M++ +ID YSK+
Sbjct: 164  ASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYNLVIDFYSKK 223

Query: 423  GDFGTAFDYVNELCS-KGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRTRA 247
            GDFG AFD +NE+C+ + + P FSTY+SILDGA RY   EV++ ++ +MV K  + +   
Sbjct: 224  GDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDRIVGLMVEKKLLPKHFL 283

Query: 246  SDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVELYN 67
            S +D VI+KL  +G+T+A ++ FKRA D+ +EL++ TY CM  A L +E RV++A+++Y+
Sbjct: 284  SGNDYVIQKLSDMGKTYAAEMIFKRACDEKIELQDDTYGCMLKA-LSKEGRVKEAIQIYH 342

Query: 66   ILQFKKILVSERCYSEFVIALC 1
            ++  + I V +  Y  FV  LC
Sbjct: 343  LISERGITVRDSDYYAFVNVLC 364


>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
            gi|482553811|gb|EOA18004.1| hypothetical protein
            CARUB_v10006439mg [Capsella rubella]
          Length = 585

 Score =  224 bits (570), Expect = 8e-56
 Identities = 125/386 (32%), Positives = 229/386 (59%), Gaps = 5/386 (1%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFS---SNLTPFTFHQILNRIRTQPK 973
            +W+TQ++ +R+ ++ S+ILLQR  + W + L+ +K     S LTP  F QIL   R  PK
Sbjct: 27   DWKTQLNLSRVATEISSILLQR--RNWITHLQYVKSKLPKSTLTPPVFLQILRETRKCPK 84

Query: 972  LCFDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVALFQP 793
            +  DFF +A+  L F PD+ ++C +  +   S L +  + +L  +V     + VV   Q 
Sbjct: 85   ITLDFFDFAQTHLHFDPDVKSQCRVIEVATESGLLERAETLLRPLVETNSVSLVVGSLQK 144

Query: 792  RRNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNE 613
                ++ S+S  L+ ++ECY  +  Y   LE +  +R++R+  S+   N LL+ L+ + +
Sbjct: 145  CCEGEV-SLSISLSLVLECYALKGCYQNGLEVFGFMRRLRLSPSLRAYNSLLDSLIKEGQ 203

Query: 612  LNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGY 433
              +A C Y++++R+ V  +  TW ++A+IL + G+ + + ++ + GV + +++  +++ Y
Sbjct: 204  FRVALCLYSAMVRNQVVSDGFTWDLVAQILCEQGRSKSVVKLMETGVESCKIYTNLVECY 263

Query: 432  SKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRT 253
            S+ G+F   F+ ++E+ +K +E SFS+Y+ +LD  CR  D E+   VL +MV K  ++  
Sbjct: 264  SRNGEFDAVFNVIHEMDNKKLELSFSSYSCVLDDVCRLGDAELMGKVLGLMVEKKFLAVD 323

Query: 252  RASDHDLVIKKLCAVGRTFAVDLFFKRA-RDDNVELENATYDCMFAALLCEESRVEDAVE 76
             ++ +D +I++LC +G+TFA ++ F++A   + V L + TY CM  A L  + R ++AV+
Sbjct: 324  ASAVNDEIIERLCDMGKTFASEMLFRKACNGETVRLRDGTYGCMLKA-LSRKGRTKEAVD 382

Query: 75   LYNILQFKKILV-SERCYSEFVIALC 1
            +Y ++  K I V  E CY+EF  ALC
Sbjct: 383  VYRLICRKGITVLDESCYTEFANALC 408


>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
            gi|557114982|gb|ESQ55265.1| hypothetical protein
            EUTSA_v10024760mg [Eutrema salsugineum]
          Length = 584

 Score =  218 bits (554), Expect = 6e-54
 Identities = 125/385 (32%), Positives = 219/385 (56%), Gaps = 4/385 (1%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFS---SNLTPFTFHQILNRIRTQPK 973
            +W+TQ+   RL ++ S+ILLQR    W + LK +K     S LTP  F +IL   R  PK
Sbjct: 27   DWKTQVSLFRLATEISSILLQRRD--WITHLKHVKSKLPRSTLTPPIFLRILRETRKSPK 84

Query: 972  LCFDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVALFQP 793
               DFF WA+  L F+PD+ + C + ++   + L +  +  +  ++ E     V+     
Sbjct: 85   TTLDFFDWAKTHLRFEPDLKSCCRVIQVATETGLLERAEAFVRPLI-ETHSVCVIVGSMH 143

Query: 792  RRNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNE 613
            R  +   S+S  L+ ++ECY  +  Y   LE +  +R++R+  S+   N LL+ LV + +
Sbjct: 144  RWFEGEVSLSTSLSLVLECYALKGSYQNGLEVFGSMRRLRLSPSLRAYNSLLDSLVKEKQ 203

Query: 612  LNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGY 433
              LA C Y++++R+ V  +  TW ++A++L + GKF+ + ++ + GV + +++  +++ Y
Sbjct: 204  FRLALCLYSAMVRNRVVSDGLTWDLVAQVLCEQGKFKSVVKLMETGVESCKIYTNLVECY 263

Query: 432  SKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRT 253
            S+ G+F   F  + E+ +K +E SF +Y  +LD ACR  D E+ + VL +MV K  ++  
Sbjct: 264  SRNGEFDAVFSVIQEMDAKKLELSFCSYGYVLDDACRLGDSELIDKVLGLMVEKEFLTLD 323

Query: 252  RASDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVEL 73
             ++ +D +I++LC +G+TFA ++ F RA +    + + TY CM  + L    R ++AV++
Sbjct: 324  DSTVNDQIIERLCDMGKTFASEMLFHRACNGGT-VRDRTYGCMLKS-LSVIGRTKEAVDV 381

Query: 72   YNILQFKKILV-SERCYSEFVIALC 1
            Y ++  K I V  E CY EF  ALC
Sbjct: 382  YRLICRKGITVLDESCYKEFANALC 406


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|332659015|gb|AEE84415.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score =  210 bits (534), Expect = 1e-51
 Identities = 125/386 (32%), Positives = 220/386 (56%), Gaps = 5/386 (1%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFS---SNLTPFTFHQILNRIRTQPK 973
            +W+TQ    R+ ++ S+ILLQR  + W + L+ +K     S LT   F QIL   R  PK
Sbjct: 27   DWKTQQTLFRVATEISSILLQR--RNWITHLQYVKSKLPRSTLTSPVFLQILRETRKCPK 84

Query: 972  LCFDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVALFQP 793
               DFF +A+  L F+PD+ + C +  +   S L +  + +L  +V E     +V     
Sbjct: 85   TTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLV-ETNSVSLVVGEMH 143

Query: 792  RRNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNE 613
            R  +   S+S  L+ ++E Y  +  +   LE +  +R++R+  S    N LL  LV +N+
Sbjct: 144  RWFEGEVSLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQ 203

Query: 612  LNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGY 433
              +A C Y++++R+G+  ++ TW +IA+IL + G+ + + ++ + GV + +++  +++ Y
Sbjct: 204  FRVALCLYSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECY 263

Query: 432  SKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRT 253
            S+ G+F   F  ++E+  K +E SF +Y  +LD ACR  D E  + VL +MV K  ++  
Sbjct: 264  SRNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDACRLGDAEFIDKVLCLMVEKKFVTLG 323

Query: 252  RASDHDLVIKKLCAVGRTFAVDLFFKRA-RDDNVELENATYDCMFAALLCEESRVEDAVE 76
             ++ +D +I++LC +G+TFA ++ F++A   + V L ++TY CM  A L  + R ++AV+
Sbjct: 324  DSAVNDKIIERLCDMGKTFASEMLFRKACNGETVRLWDSTYGCMLKA-LSRKKRTKEAVD 382

Query: 75   LYNILQFKKILV-SERCYSEFVIALC 1
            +Y ++  K I V  E CY EF  ALC
Sbjct: 383  VYRMICRKGITVLDESCYIEFANALC 408


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score =  210 bits (534), Expect = 1e-51
 Identities = 125/386 (32%), Positives = 220/386 (56%), Gaps = 5/386 (1%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFS---SNLTPFTFHQILNRIRTQPK 973
            +W+TQ    R+ ++ S+ILLQR  + W + L+ +K     S LT   F QIL   R  PK
Sbjct: 27   DWKTQQTLFRVATEISSILLQR--RNWITHLQYVKSKLPRSTLTSPVFLQILRETRKCPK 84

Query: 972  LCFDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVALFQP 793
               DFF +A+  L F+PD+ + C +  +   S L +  + +L  +V E     +V     
Sbjct: 85   TTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLV-ETNSVSLVVGEMH 143

Query: 792  RRNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNE 613
            R  +   S+S  L+ ++E Y  +  +   LE +  +R++R+  S    N LL  LV +N+
Sbjct: 144  RWFEGEVSLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQ 203

Query: 612  LNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGY 433
              +A C Y++++R+G+  ++ TW +IA+IL + G+ + + ++ + GV + +++  +++ Y
Sbjct: 204  FRVALCLYSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECY 263

Query: 432  SKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRT 253
            S+ G+F   F  ++E+  K +E SF +Y  +LD ACR  D E  + VL +MV K  ++  
Sbjct: 264  SRNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDACRLGDAEFIDKVLCLMVEKKFVTLG 323

Query: 252  RASDHDLVIKKLCAVGRTFAVDLFFKRA-RDDNVELENATYDCMFAALLCEESRVEDAVE 76
             ++ +D +I++LC +G+TFA ++ F++A   + V L ++TY CM  A L  + R ++AV+
Sbjct: 324  DSAVNDKIIERLCDMGKTFASEMLFRKACNGETVRLWDSTYGCMLKA-LSRKKRTKEAVD 382

Query: 75   LYNILQFKKILV-SERCYSEFVIALC 1
            +Y ++  K I V  E CY EF  ALC
Sbjct: 383  VYRMICRKGITVLDESCYIEFANALC 408


>ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297313697|gb|EFH44120.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score =  195 bits (496), Expect = 3e-47
 Identities = 125/386 (32%), Positives = 210/386 (54%), Gaps = 5/386 (1%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFS---SNLTPFTFHQILNRIRTQPK 973
            +W+TQ    RL ++ S+ILLQR  + W S L+ +K     S LT   F QI+   R  PK
Sbjct: 27   DWKTQQTLFRLATEISSILLQR--RNWISHLQYVKSKLPRSTLTSPIFLQIIRETRKCPK 84

Query: 972  LCFDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVALFQP 793
               DFF +A+  L F+PD+ + C +  +   S L +  + +L  +V     + VV     
Sbjct: 85   TTLDFFDFAKTHLRFEPDLKSHCRVIEVATESGLLERAETLLRPLVETHSVSLVVGSMHR 144

Query: 792  RRNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNE 613
                D+ S+S  L+ +IECY  +  Y   LE +  +R++R+  S    N LL  LV +N+
Sbjct: 145  WFEGDV-SLSISLSLVIECYALKGCYQNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQ 203

Query: 612  LNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGY 433
              +A C Y+                 A IL + G+ + + ++ + GV + +++  +++ Y
Sbjct: 204  FRVALCLYS-----------------AMILCEHGRSKSVVKLMETGVESCKIYTNLVECY 246

Query: 432  SKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRT 253
            S+ G+F   F  ++E+  K +E SFS+Y  +LD ACR  D E+ + VL  MV K  ++  
Sbjct: 247  SRNGEFDATFSLIHEMDGKKLELSFSSYGCVLDNACRLGDAELIDKVLGSMVEKKFLTLG 306

Query: 252  RASDHDLVIKKLCAVGRTFAVDLFFKRA-RDDNVELENATYDCMFAALLCEESRVEDAVE 76
             ++ +D +I++LC +G+TFA ++ F++A   + V L  +TY CM  AL  +E R ++AV+
Sbjct: 307  DSALNDQMIERLCDMGKTFASEMLFRKACNGETVRLRESTYGCMLKALSRKE-RTKEAVD 365

Query: 75   LYNILQFKKI-LVSERCYSEFVIALC 1
            +Y ++  K I ++ E CY+EF  ALC
Sbjct: 366  VYRMICRKGINVLDESCYNEFANALC 391


>emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|7268914|emb|CAB79117.1|
            putative protein [Arabidopsis thaliana]
          Length = 534

 Score =  184 bits (466), Expect = 9e-44
 Identities = 120/386 (31%), Positives = 206/386 (53%), Gaps = 5/386 (1%)
 Frame = -1

Query: 1143 NWRTQIHQTRLVSQASTILLQRHPKFWASLLKPLKFS---SNLTPFTFHQILNRIRTQPK 973
            +W+TQ    R+ ++ S+ILLQR  + W + L+ +K     S LT   F QIL   R  PK
Sbjct: 27   DWKTQQTLFRVATEISSILLQR--RNWITHLQYVKSKLPRSTLTSPVFLQILRETRKCPK 84

Query: 972  LCFDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKVVALFQP 793
               DFF +A+  L F+PD+ + C +  +   S L +  + +L  +V E     +V     
Sbjct: 85   TTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLV-ETNSVSLVVGEMH 143

Query: 792  RRNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNE 613
            R  +   S+S  L+ ++E Y  +  +   LE +  +R++R+  S    N LL  LV +N+
Sbjct: 144  RWFEGEVSLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQ 203

Query: 612  LNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFDVGVYTSEMFDFIIDGY 433
              +A C Y+                 A IL + G+ + + ++ + GV + +++  +++ Y
Sbjct: 204  FRVALCLYS-----------------AMILCEQGRSKSVFKLMETGVESCKIYTNLVECY 246

Query: 432  SKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRT 253
            S+ G+F   F  ++E+  K +E SF +Y  +LD ACR  D E  + VL +MV K  ++  
Sbjct: 247  SRNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDACRLGDAEFIDKVLCLMVEKKFVTLG 306

Query: 252  RASDHDLVIKKLCAVGRTFAVDLFFKRA-RDDNVELENATYDCMFAALLCEESRVEDAVE 76
             ++ +D +I++LC +G+TFA ++ F++A   + V L ++TY CM  A L  + R ++AV+
Sbjct: 307  DSAVNDKIIERLCDMGKTFASEMLFRKACNGETVRLWDSTYGCMLKA-LSRKKRTKEAVD 365

Query: 75   LYNILQFKKILV-SERCYSEFVIALC 1
            +Y ++  K I V  E CY EF  ALC
Sbjct: 366  VYRMICRKGITVLDESCYIEFANALC 391


>ref|XP_004288209.1| PREDICTED: pentatricopeptide repeat-containing protein At5g38730-like
            [Fragaria vesca subsp. vesca]
          Length = 589

 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 99/418 (23%), Positives = 170/418 (40%), Gaps = 44/418 (10%)
 Frame = -1

Query: 1122 QTRLVSQASTILLQRHPKFWASLLKPLKFSSNLTPFTFHQILNRIRTQ---PKLCFDFFT 952
            +T+L+     I+L+ H   W+ LL P K  S LT    HQ+L ++      P L   FF 
Sbjct: 10   ETQLIQSLFAIVLKGH---WSHLLNP-KLGSCLTSSAIHQVLLQLSLYGYTPSLSLSFFK 65

Query: 951  WARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLE---FPPAKVVALFQPRRND 781
            WA    ++K  +     +  IL      K     L  I        P+ + AL   + + 
Sbjct: 66   WAESLPNYKHSLQCSWTMVHILTKHRHFKTAHQFLEKIAFRDFLSSPSVLNALIPTQDDP 125

Query: 780  DLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNELNLA 601
            D++S   VL+ ++  Y + +M   +++    +R    +  +  C  LLN LV    +++ 
Sbjct: 126  DVNSH--VLSWLVITYANSKMTQDAIQVLEHMRVHGFKPHLHACTVLLNSLVKDRLISMV 183

Query: 600  WCFYASIIRDGVSMNKSTWSVIAKILYKDG---KFERICRIFDVGVYTSEMFDF--IIDG 436
            W  Y  +I+ GV  N  T++V+     K G   K E +    ++     ++F F  +I  
Sbjct: 184  WKVYKKMIKGGVVPNIHTYNVLIHACCKSGDIEKAEGLVSEMELRCVFPDLFTFNTLISL 243

Query: 435  YSKRG-------------------DFGTAFDYVNELCS--------------KGMEPSFS 355
            YSK G                   D  T    +   C               KG  P+  
Sbjct: 244  YSKTGMHYEALCVQSRMELAGVSPDMVTYNSLMYGFCREGRMTEAVKLFRDIKGCVPNHI 303

Query: 354  TYTSILDGACRYHDREVAENVLSIMVAKGHISRTRASDHDLVIKKLCAVGRTFAVDLFFK 175
            TYT+++DG CR +D E A  +  +M +KG         ++ +++KLC  GR    +    
Sbjct: 304  TYTTLIDGYCRVNDLEEALRLCEVMKSKG--LYPGVVTYNSILRKLCQEGRMRDANKLLN 361

Query: 174  RARDDNVELENATYDCMFAALLCEESRVEDAVELYNILQFKKILVSERCYSEFVIALC 1
               + NVE +N T + +  A  C+   +  AV++ N +    + +    Y   +   C
Sbjct: 362  EMSEKNVEPDNVTCNTLINA-YCKIGDMMSAVKVKNRMLASGLKLDAFTYKALIHGFC 418


>ref|XP_006846521.1| hypothetical protein AMTR_s00018p00185360 [Amborella trichopoda]
            gi|548849331|gb|ERN08196.1| hypothetical protein
            AMTR_s00018p00185360 [Amborella trichopoda]
          Length = 735

 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 105/400 (26%), Positives = 175/400 (43%), Gaps = 12/400 (3%)
 Frame = -1

Query: 1164 LREDPTPNWRTQ-IHQTRLVSQASTILLQRHPKFWASLLKPLKFSSNLT-PFTFHQILNR 991
            L   PT   R     +T+LV      L            K LK+ S +  P  F  +LN 
Sbjct: 38   LNPQPTETQRVSGTSETQLVQFIFRTLNNNTSDLKLGFRKLLKYKSLIVKPSIFLGVLNT 97

Query: 990  IRTQPKLCFDFFTWARKTLDFKPDIGARCELTRILFGSELPKLGKPILNSIVLEFPPAKV 811
            IR QPKL   FF W  +   F+      C +  IL  S   K    ++ +++        
Sbjct: 98   IRDQPKLALHFFYWTERLPGFECSAIVLCSILNILAQSGRMKSAYRVIENVIQH--NGDK 155

Query: 810  VALFQPRRNDDLHSMSPVLNSIIECYCSEEMYFQSL-EFYRMVRKIRVRLSVDECNRLLN 634
            +  F         S   +LN ++  Y  + M  QS+  FY MV        V  CNR+L 
Sbjct: 156  LPEFLMNGFVCSESSIKLLNVLLLIYAQKGMVEQSVTTFYSMVGN-GFLPDVRNCNRILR 214

Query: 633  LLVDKNELNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFER----ICRIFDVGVYT 466
            +L D N ++ A   Y  +IR G+S    T++ +     K+GK +     +  + + G   
Sbjct: 215  MLRDGNLVDKAREIYREMIRVGISPTVVTFNTLLDSFCKEGKVQEALDLLSEMQEKGCMP 274

Query: 465  SEM-FDFIIDGYSKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENVL 289
            S++ ++ +I+G SK G    A + V E+   G+  S  TY  ++ G C   +   A    
Sbjct: 275  SDVTYNVLINGLSKVGKMDKAVELVTEMQIHGLAVSNYTYNPLIYGYCIGGNLRNAFKFF 334

Query: 288  SIMVAKGHISRTRASDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCM-FAAL 112
            + M++ G +S T  + ++ +I  LC  GR     L   R++ D +   N T D + F +L
Sbjct: 335  NEMISNG-VSPT-ITTYNTLINGLCKKGR-----LEEARSQFDGILSNNLTPDIISFNSL 387

Query: 111  L---CEESRVEDAVELYNILQFKKILVSERCYSEFVIALC 1
            +   C E ++E+A  L++ L+ K ++ +   Y+  +  LC
Sbjct: 388  IYGYCHEKKLEEAFWLFDELRRKHLMPTIITYNTLIYGLC 427


>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score = 93.6 bits (231), Expect = 2e-16
 Identities = 77/359 (21%), Positives = 159/359 (44%), Gaps = 9/359 (2%)
 Frame = -1

Query: 1050 KPLKFSSNLTPFTFHQILNRIRTQPKLCFDFFTWARKTLDFKPDIGARCELTRILFGSEL 871
            K    S++LTPF    IL +I+    L  +FF W +        +     +  IL  +  
Sbjct: 49   KLTSLSTHLTPFRVKHILLKIQKDHVLSLEFFNWVQTENPSSHTLETHSMILHILTKNRK 108

Query: 870  PKLGKPILNSIV----LEFPPAKVVALFQPRRNDDLHSMSPVLNSIIECYCSEEMYFQSL 703
             K  + IL S++    ++ P     A+    R  D  S   V +S+ +     + +  + 
Sbjct: 109  FKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCD--SSPRVFDSLFKTLAHMKKFRNAT 166

Query: 702  EFYRMVRKIRVRLSVDECNRLLNLLVDKNELNLAWCFYASIIRDGVSMNKSTWSVIAKIL 523
            + +  ++      +V+ CN  L+ L+D + +++A  FY  + R  +S N  T +++ +  
Sbjct: 167  DTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAF 226

Query: 522  YKDGKFERICRIFD----VGVYTSE-MFDFIIDGYSKRGDFGTAFDYVNELCSKGMEPSF 358
             K GK E+  ++F+    VG+  ++  ++ +I GY ++G   +A    N + +KG+E + 
Sbjct: 227  CKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANV 286

Query: 357  STYTSILDGACRYHDREVAENVLSIMVAKGHISRTRASDHDLVIKKLCAVGRTFAVDLFF 178
             T+ S++DG C+      A  V S M        T    ++ +I     +G +      +
Sbjct: 287  VTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNT--ITYNTLINGHSQMGNSEMGRRLY 344

Query: 177  KRARDDNVELENATYDCMFAALLCEESRVEDAVELYNILQFKKILVSERCYSEFVIALC 1
            +    + V+ +  TY+ +    LC+E + + A  +   L  + ++ +   +S  +   C
Sbjct: 345  EEMSRNGVKADILTYNALILG-LCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQC 402


>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820-like
            [Cucumis sativus] gi|449524964|ref|XP_004169491.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g09820-like [Cucumis sativus]
          Length = 611

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 82/345 (23%), Positives = 151/345 (43%), Gaps = 12/345 (3%)
 Frame = -1

Query: 1065 WASLLKPLKFSSNLTPFTF-HQILNRIRTQPKLCFDFFTWARKTLDFKPDIGARCELTRI 889
            W+ L   +KF S   P  F HQ++      P L   +F W+R+ L+    I   C L  +
Sbjct: 60   WSILKSHVKFKS---PIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNL 116

Query: 888  LFGSE-LPKLGKPILNSIVLEFPPAKVVALFQPRR--NDDLHSMSPVLNSIIECYCSEEM 718
            L  ++  PK+ + IL+S V       +  +F      +    + S + + ++  Y     
Sbjct: 117  LANAKHYPKI-RSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSK 175

Query: 717  YFQSLEFYRMVRKIRVRLSVDECNRLLNLLVDKNELNLAWCFYASIIRDGVSMNKSTWSV 538
                LE ++     R +LSV  CN LL+ LV +NE       Y  +IR  +S N  T++ 
Sbjct: 176  TVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNT 235

Query: 537  IAKILYKDGKFERICRIFD----VGVYTSEM-FDFIIDGYSKRGDFGTAFD---YVNELC 382
            +   L K GK  +   + D     G + + + ++ +IDGY K G  G  +     + E+ 
Sbjct: 236  VINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV 295

Query: 381  SKGMEPSFSTYTSILDGACRYHDREVAENVLSIMVAKGHISRTRASDHDLVIKKLCAVGR 202
               + P+  T+  ++DG C+  +   A  V   M ++G   +     ++ ++  LC  G+
Sbjct: 296  ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQG--LKPTVVTYNSLVNGLCNEGK 353

Query: 201  TFAVDLFFKRARDDNVELENATYDCMFAALLCEESRVEDAVELYN 67
                 +        N++    TY+ +     C++  +E+A EL++
Sbjct: 354  LNEAKVLLDEMLSSNLKPNVITYNALING-YCKKKLLEEARELFD 397



 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 53/253 (20%), Positives = 106/253 (41%), Gaps = 5/253 (1%)
 Frame = -1

Query: 816  KVVALFQPRRNDDLHSMSPVLNSIIECYCSEEMYFQSLEFYRMVRKIRVRLSVDECNRLL 637
            K  A+ +    + +   S   N +I+ +C +E    +L+ +  ++   ++ +V   N L+
Sbjct: 286  KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345

Query: 636  NLLVDKNELNLAWCFYASIIRDGVSMNKSTWSVIAKILYKDGKFERICRIFD----VGVY 469
            N L ++ +LN A      ++   +  N  T++ +     K    E    +FD     G+ 
Sbjct: 346  NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405

Query: 468  TSEM-FDFIIDGYSKRGDFGTAFDYVNELCSKGMEPSFSTYTSILDGACRYHDREVAENV 292
             + + F+ ++ GY K G    AF     +  KG  P+ STY  ++ G CR    E  +N+
Sbjct: 406  PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465

Query: 291  LSIMVAKGHISRTRASDHDLVIKKLCAVGRTFAVDLFFKRARDDNVELENATYDCMFAAL 112
            L+ M  +G   +     ++++I   C                D  ++  + TY+ +    
Sbjct: 466  LNEMQCRG--VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNG- 522

Query: 111  LCEESRVEDAVEL 73
             C E  +  A+ L
Sbjct: 523  YCMEGNLRAALNL 535