BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00016304
         (3732 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR08426.1| phytochrome A [Orobanche minor]                       1860   0.0  
ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuber...  1852   0.0  
gb|EYU19354.1| hypothetical protein MIMGU_mgv1a000485mg [Mimulus...  1847   0.0  
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop...  1843   0.0  
ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|7657416...  1839   0.0  
gb|EYU35379.1| hypothetical protein MIMGU_mgv1a000476mg [Mimulus...  1838   0.0  
sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb...  1836   0.0  
gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]                      1834   0.0  
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...  1833   0.0  
gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]                      1832   0.0  
gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]                      1830   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1824   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                         1823   0.0  
ref|XP_007031301.1| Phytochrome A [Theobroma cacao] gi|508719906...  1803   0.0  
ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citr...  1780   0.0  
gb|EXB57569.1| Phytochrome type A [Morus notabilis]                  1778   0.0  
ref|XP_002512596.1| phytochrome A, putative [Ricinus communis] g...  1771   0.0  
ref|XP_002318913.1| phytochrome A family protein [Populus tricho...  1768   0.0  
gb|AEK26583.1| phytochrome A [Populus tremula]                       1753   0.0  
ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesc...  1752   0.0  

>gb|AAR08426.1| phytochrome A [Orobanche minor]
          Length = 1123

 Score = 1860 bits (4818), Expect = 0.0
 Identities = 915/1118 (81%), Positives = 1030/1118 (92%), Gaps = 5/1118 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHVE---QRPK 391
            S+Q G+SSTNSA+SR SAR+IAQTS+DAKL ADFEESG+SFDYS+SVRVT+       P+
Sbjct: 3    SSQPGRSSTNSAQSRQSARIIAQTSIDAKLDADFEESGSSFDYSTSVRVTNYPAGLSEPR 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SDKVTTAYLHQIQKGK IQ FGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVG++P+
Sbjct: 63   SDKVTTAYLHQIQKGKLIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPL 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIGSDIRTIFT+PSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSL+IDF
Sbjct: 123  LGIGSDIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKPHEVPMTAAGALQSYKLAAKAI  LQ+LP GSIERLCDTM Q+VFELTGYDRVMIY
Sbjct: 183  EPVKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVMIY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFHEDDHGEVFTEI KPGL+PYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV+Q
Sbjct: 243  KFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEGSNSTH-PDKRKR 1288
            D+NLP DLTLCGS+LRAPH CH QYMENMNSIASLVMS+VVNEGDE+G +S+  P KRKR
Sbjct: 303  DDNLPFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEDGPDSSSGPYKRKR 362

Query: 1289 LWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDML 1468
            LWGLVVCH+T PRF+PFPLRYACEFL QVF+IHVNKELELENQMLEKNILRTQTLLCD+L
Sbjct: 363  LWGLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCDLL 422

Query: 1469 LRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDSTG 1648
            LRD PLGIVSQSPNVMDLVKCDGA LL+K  K+RLG+TP+DFQIRDIVSWLDEYH+DSTG
Sbjct: 423  LRDVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDSTG 482

Query: 1649 LSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKDD 1828
            LSTDSLYDAGFPGALALG+A+CGMAAVKITD+DWLFWFRSHTAAEIRWGGAKHE + KDD
Sbjct: 483  LSTDSLYDAGFPGALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAKDD 542

Query: 1829 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTKL 2008
            GRKMHPRSSF+AFLEVVKTRSLPWKDYEMD IHSLQLILRN++KE+E  D  ++ IH +L
Sbjct: 543  GRKMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHARL 602

Query: 2009 NDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGCH 2188
            N+LQI+G++E+EAVTSEMVRLIETA+VPI +V VDG+VNGWNTKI+DLTGL V  AIG H
Sbjct: 603  NELQIDGVKEIEAVTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIGMH 662

Query: 2189 FLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKEN 2368
            FL+LVEDSSAD VS ML LAL+G+EE +VQFEIKTHG+RSESGPI+L+VNACAS+DVKEN
Sbjct: 663  FLALVEDSSADTVSKMLGLALQGKEEHDVQFEIKTHGQRSESGPISLIVNACASKDVKEN 722

Query: 2369 VVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMTK 2548
            VVGVCFIAQD+T QKSMMDKFTRIEGDY++I+QNPNPLIPPIFGTDEFGWCSEWNAAM K
Sbjct: 723  VVGVCFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEFGWCSEWNAAMIK 782

Query: 2549 VSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFSR 2728
            +SGW R+ V++KMLLGEVFG N+A CRLKNQEAYVNLG+VLNN VTGQ++ K+ FGFFSR
Sbjct: 783  LSGWGREAVIDKMLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTVTGQESGKVSFGFFSR 842

Query: 2729 SGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYMR 2908
            SGKYV CLLCVSKK+D+EG+V G+FCF            H+QR+SEQTA KRL+VL+Y+R
Sbjct: 843  SGKYVACLLCVSKKVDSEGSVTGLFCFLQLASPELQQALHIQRISEQTASKRLRVLAYIR 902

Query: 2909 KEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLE 3088
            +E+R+PLSGIIFSRK+MEGTD+++EQKN++RTSLHCQ Q+NKIL+DTDLDHIIEGYLDLE
Sbjct: 903  REIRSPLSGIIFSRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILEDTDLDHIIEGYLDLE 962

Query: 3089 MMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLISV 3268
            M+EFKLH+VLIASISQV+ KSNGKGI IVD+LAPNLS+ETLYGDSLRLQQVLAAFLLI+V
Sbjct: 963  MVEFKLHEVLIASISQVISKSNGKGIKIVDNLAPNLSNETLYGDSLRLQQVLAAFLLIAV 1022

Query: 3269 TYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDD-VDACEEG 3445
              TPS GQLG+AA+L KDS+G+ +QLG LE RITH GGGVPQ++L+QMFGD+  DA E+G
Sbjct: 1023 DSTPSGGQLGVAATLAKDSIGEFVQLGRLECRITH-GGGVPQEILNQMFGDEPTDASEDG 1081

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISS 3559
            ISLFISRKLVKLM GD+QYLREAGRSTFIIS+E+AIS+
Sbjct: 1082 ISLFISRKLVKLMKGDIQYLREAGRSTFIISVEIAISN 1119


>ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1852 bits (4798), Expect = 0.0
 Identities = 902/1120 (80%), Positives = 1022/1120 (91%), Gaps = 5/1120 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV---EQRPK 391
            S++  QSST S+RS+HSAR+IAQTS+DAKLHADFEESG SFDYSSSVRVT+V   EQRPK
Sbjct: 3    SSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPK 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SDKVTTAYLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVGE+PV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIG+DIRTIFT PS AALQKALGFGEVSLLNP+LVHCK SGKPFYAI+HRVTGSL+IDF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFH+DDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV+Q
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDKRK 1285
            DE LP DLTLCGS+LRAPH CHLQYMENMNSIASLVM++VVN+GDEEG  S+S+   KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            L+RDAPLGIVSQSPN+MDL+KCDGAALLYKNK HRLGM PSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I+DKDWLFW+RSHTAAE+RWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRN+FK+A++ +S   +IHTK
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTISIHTK 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            LNDL+I+G+QELEAVT+EMVRLIETASVPI AVDVDG VNGWNTK+A+LTGLPVD AIG 
Sbjct: 603  LNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            H L+LVEDSS D V+ ML+LAL+G+EERNV+FEIKTHG   +S PI+L+VNACAS+DV++
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            +VVGVCFIAQD+T QKS+MDKFTRIEGDY+AI+QNP+PLIPPIFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFS 2725
            K++GW RDDVM+KMLLGEVFGT  A CRLKNQEA+VN G++LNNA+TGQ++EK+PFGFF+
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFA 842

Query: 2726 RSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYM 2905
            R GKYVECLLCVSK+LD EGAV G+FCF            HVQRLSEQTA+KRLKVL+Y+
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 2906 RKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 3085
            R+++RNPLSGIIFSRKM+EGT + EEQKN+L TS  CQRQL+KILDDTDLD IIEGYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDL 962

Query: 3086 EMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLIS 3265
            EM+EFKLH+VL+ASISQVM+KSNGK IMI +D+  +L +ETLYGDS RLQQVLA FLL+S
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 3266 VTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEG 3445
            V  TPS G+L I+  LTKD +G+++QL  LEFRI H+GGGVP+++LSQMFG + DA EEG
Sbjct: 1023 VNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEG 1082

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNS 3565
            ISL +SRKLVKLMNG+VQYLREAGRSTFIIS+ELA+++ S
Sbjct: 1083 ISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATKS 1122


>gb|EYU19354.1| hypothetical protein MIMGU_mgv1a000485mg [Mimulus guttatus]
          Length = 1125

 Score = 1847 bits (4784), Expect = 0.0
 Identities = 909/1122 (81%), Positives = 1020/1122 (90%), Gaps = 6/1122 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHVEQR----- 385
            S Q GQSSTN+ARSRH+AR+IAQTS DAKLHADF++SGTSFDYS+SVR+T    +     
Sbjct: 3    SPQPGQSSTNTARSRHTARIIAQTSTDAKLHADFDQSGTSFDYSTSVRLTKAPTKGALEP 62

Query: 386  PKSDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEY 565
             +S+KVTTAYLHQIQKG  IQPFGCLLALDEKTFRVIAYSENAPEMLTMV+HAVP+V + 
Sbjct: 63   TRSNKVTTAYLHQIQKGTLIQPFGCLLALDEKTFRVIAYSENAPEMLTMVTHAVPNVNDQ 122

Query: 566  PVIGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVI 745
            PV+ IGSDIR+IFT+PS AALQKALGFGEVSLLNPILVHCK+SGKP+YAI+HRVTGSL++
Sbjct: 123  PVLSIGSDIRSIFTAPSGAALQKALGFGEVSLLNPILVHCKSSGKPYYAIVHRVTGSLIV 182

Query: 746  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVM 925
            DFEPVKP EVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERLCDTM QEVFELTGYDRVM
Sbjct: 183  DFEPVKPDEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM 242

Query: 926  IYKFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1105
             YKFH+DDHGEV TEI KPGL+PY GLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV
Sbjct: 243  AYKFHDDDHGEVLTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 302

Query: 1106 IQDENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEGSNSTHPDKRK 1285
            +QDE+LP +LTLCGS+LRAPHSCHLQYMENM SIASLVMS+VVNEG EE  + +   KRK
Sbjct: 303  VQDEHLPFNLTLCGSTLRAPHSCHLQYMENMGSIASLVMSVVVNEGAEEEPSPSDSSKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVVCH+TSPRFVPFPLRYACEFL QVFAIHVNKELELENQ+LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            LLRDAPLGIVS+SPNVMDLVKCDGA LLYKNK++R+GMTP+DFQIRDIVSWLDEYHRDST
Sbjct: 423  LLRDAPLGIVSRSPNVMDLVKCDGALLLYKNKRYRMGMTPTDFQIRDIVSWLDEYHRDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAGFPGALALGDAVCG+AAVKIT++DWLFWFRSHTA+E+RWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGVAAVKITERDWLFWFRSHTASEVRWGGAKHEPGEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            DGRKMHPRSSF AFLEVVKTRSLPWK+YEMDAIHSLQLILRN+FKEA+  DS  + IHTK
Sbjct: 543  DGRKMHPRSSFNAFLEVVKTRSLPWKEYEMDAIHSLQLILRNAFKEADEKDSNTQEIHTK 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            LND++IEGIQELEAVTSEMVRLIETASVPILAVD +G+VNGWN KIADLTGL V++AI  
Sbjct: 603  LNDMRIEGIQELEAVTSEMVRLIETASVPILAVDSNGLVNGWNQKIADLTGLRVEDAIER 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            HFL+LVE+S AD V+  L LAL+G+EERN++FEIKTHG RSE GPI+LVVNACASRDVKE
Sbjct: 663  HFLTLVEESCADTVNKTLALALQGKEERNIEFEIKTHGSRSECGPISLVVNACASRDVKE 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            NVVGVCFIAQDVTAQKSMMDKFTRIEG+YKAIVQNPNPLIPPIFGTDEFGWCSEWN +M 
Sbjct: 723  NVVGVCFIAQDVTAQKSMMDKFTRIEGEYKAIVQNPNPLIPPIFGTDEFGWCSEWNPSMI 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGT-NRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFF 2722
            K+SGW R D+++KML+GEVFG  N+A C LKNQEA VNLGI LN+AVTGQD+EK+PFGFF
Sbjct: 783  KLSGWDRQDMIDKMLIGEVFGVHNKACCCLKNQEALVNLGIALNSAVTGQDSEKIPFGFF 842

Query: 2723 SRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSY 2902
            SR+GKY+ECLL VSKKLD EGAV G+FCF            H+QRLSEQTA+K+ +VL+Y
Sbjct: 843  SRNGKYIECLLSVSKKLDGEGAVTGLFCFLHLASQELQQAIHIQRLSEQTALKKSRVLAY 902

Query: 2903 MRKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLD 3082
            ++KE+ NP++GI F+RKMMEGT++DEEQK LL+ SLHCQ QLNKIL+DTDLDHIIEGYLD
Sbjct: 903  IKKEISNPVAGIKFTRKMMEGTELDEEQKKLLQISLHCQHQLNKILEDTDLDHIIEGYLD 962

Query: 3083 LEMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLI 3262
            LEM EFKLHDVLIASISQVM+KSN KGIMIVD LAPNLS+E  +GDS RLQQVLA FLL+
Sbjct: 963  LEMTEFKLHDVLIASISQVMMKSNEKGIMIVDKLAPNLSTELFFGDSARLQQVLATFLLV 1022

Query: 3263 SVTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEE 3442
            SVTYTPS GQL IAA+L K+S+G++++LGHLEFRITHSGGGV Q++LS+MFGD+ +A EE
Sbjct: 1023 SVTYTPSGGQLTIAATLAKNSIGQSVKLGHLEFRITHSGGGVAQELLSEMFGDEEEASEE 1082

Query: 3443 GISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNSQ 3568
            GI+LFISRKLVKLMNGDVQYLREAGRSTFI+++E+AISS  Q
Sbjct: 1083 GINLFISRKLVKLMNGDVQYLREAGRSTFIVTVEVAISSKPQ 1124


>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score = 1843 bits (4773), Expect = 0.0
 Identities = 898/1120 (80%), Positives = 1018/1120 (90%), Gaps = 5/1120 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV---EQRPK 391
            S++  QSST S+RS+HSAR++AQTS+DAKLHADFEESG SFDYSSSVRVT V   E++PK
Sbjct: 3    SSRPSQSSTTSSRSKHSARIVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPK 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SDKVTTAYLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVGE+PV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIG+DIRTIFT PS AALQKALGFGEVSLLNP+LVHCK SGKPFYAI+HRVTGSL++DF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFHEDDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV+Q
Sbjct: 243  KFHEDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDKRK 1285
            DE LP DLTLCGS+LRAPH CHLQYMENMNSIASLVM++VVN+GDEEG  S+S+   KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            L+RDAPLGIVSQSPN+MDLVKCDGAALLYKNK HRLGM PSDFQ++DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I+DKDWLFWFRSHTAAE+RWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRN+FK+AE  +S   +I+ K
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKK 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            LNDL+I+G+QELE+VT+EMVRLIETA VPILAVDVDG VNGWNTKIA+LTGLPVD AIG 
Sbjct: 603  LNDLKIDGMQELESVTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGK 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            H L+LVEDSS D V+ ML+LAL+G+EE+NV+FEIKTHG   +S PI+L+VNACAS+DV++
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            NVVGVCF+A D+T QKS+MDKFTRIEGDY+AI+QNP+PLIPPIFGTD+FGWCSEWN AMT
Sbjct: 723  NVVGVCFMAHDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMT 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFS 2725
            K++GW RDDVM+KMLLGEVFGT  A CRLKNQEA+VN G+VLNNA+TGQ++EK+PFGFF+
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFA 842

Query: 2726 RSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYM 2905
            R GKYVECLLCVSK+LD EGAV G+FCF            +VQRLSEQTA+KRLKVL+Y+
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYI 902

Query: 2906 RKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 3085
            R+++RNPLSGIIFSRKM+EGT + EEQKN+L TS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 3086 EMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLIS 3265
            EM+EFKLH+VL+ASISQVM+KSNGK IMI +D+  +L +ETLYGDS RLQQVLA FLL+S
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 3266 VTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEG 3445
            V  TPS GQL I+  LTKD +G+++QL  LEFRI H+GGGVP+++L QMFG + DA EEG
Sbjct: 1023 VNATPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLGQMFGSEADASEEG 1082

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNS 3565
            ISL +SRKLVKLMNG+VQYLREAG+STFIIS+ELA+++NS
Sbjct: 1083 ISLLVSRKLVKLMNGEVQYLREAGQSTFIISVELAVATNS 1122


>ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|76574169|gb|ABA46868.1|
            phytochrome A [Solanum tuberosum]
          Length = 1123

 Score = 1839 bits (4763), Expect = 0.0
 Identities = 896/1120 (80%), Positives = 1015/1120 (90%), Gaps = 5/1120 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV---EQRPK 391
            S++  QSS  S+RS+HSAR+IAQTS+DAKLHADFEESG SFDYSSSVRVT V   E+RPK
Sbjct: 3    SSRPSQSSATSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEERPK 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SDKVTTAYLHQIQKGK IQPFG LLALDEKT +VIA+SENAPEMLTMVSHAVPSVGE+PV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIG+DIRTIFT PS AALQKALGFGEVSLLNP+LVHCK SGKPFYAI+HRVTGSL+IDF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFH+DDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV+Q
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDKRK 1285
            DE LP DLTLCGS+LRAPH CHLQYMENMNS+ASLVM++VVN+GDEEG  S+S+   KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            L+RDAPLGIVSQSPN+MDLVKCDGAALLYKNK HRLGM PSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I+DKDWLFW+RSHTAAE+RWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRN+FK+A++ +S   +IHTK
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTK 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            LNDL+I+G+QELEAVT+EM+RLIETASVPI AVDVDG VNGWNTK+A+LTGLPVD AIG 
Sbjct: 603  LNDLRIDGMQELEAVTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            H L+LVEDSS D V+ ML+LAL+G+EERNV+FEIK HG   +S PI+L+VNACAS+DV++
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDVRD 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            +VVGVCFIAQD+T QKS+MDKFTRIEGDY+AI+QNP+PLIPPIFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFS 2725
            K++GW RDDVM+KMLLGEVFGT  A CRLKNQEA+VN G++LNNA+TGQ++EK+PFGFF 
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFG 842

Query: 2726 RSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYM 2905
            R GKYVECLLCVSK+LD EGAV G+FCF            HVQRLSEQTA+KRLKVL+Y+
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 2906 RKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 3085
            R++++NPLSGIIFS KM+EGT + EEQKN+L TS  CQRQLNKILDDTDLD IIEGYLDL
Sbjct: 903  RRQIKNPLSGIIFSWKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYLDL 962

Query: 3086 EMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLIS 3265
            EM+EFKLH+VL+ASISQVM+KSNGK IMI +D+  +L +ETLYGDS RLQQVLA FLL+S
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 3266 VTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEG 3445
            V  TPS GQL I+  LTKD +G+++QL  LEFRI H+GGGVP+++LSQM G +VDA EEG
Sbjct: 1023 VNSTPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMLGSEVDASEEG 1082

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNS 3565
            I L +SRKLVKLMNG+VQYLREAGRSTFIIS+ELA+++ S
Sbjct: 1083 IFLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATKS 1122


>gb|EYU35379.1| hypothetical protein MIMGU_mgv1a000476mg [Mimulus guttatus]
          Length = 1129

 Score = 1838 bits (4761), Expect = 0.0
 Identities = 917/1131 (81%), Positives = 1029/1131 (90%), Gaps = 16/1131 (1%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESG-TSFDYSSSVRVTHVEQR---- 385
            S Q GQSST SARSRHSAR+IAQTS+DAKLHADFEESG TSFDYS+SVRVT+   R    
Sbjct: 3    SAQPGQSSTTSARSRHSARMIAQTSIDAKLHADFEESGGTSFDYSASVRVTNDPIRGGDH 62

Query: 386  -PKSDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGE 562
             P S KVTTAYLHQIQKGK IQPFGCLLALDEKTF+VIAYSENAPEMLT V+HAVP VG+
Sbjct: 63   PPSSSKVTTAYLHQIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTTVTHAVPIVGD 122

Query: 563  YPVIGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLV 742
            +P + IGSDIR+IFT+PS++ALQKALGFGEVSLLNP+LVHCKTSGKPFYAIIHRVTG L+
Sbjct: 123  HPFLDIGSDIRSIFTAPSSSALQKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGGLI 182

Query: 743  IDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRV 922
            IDFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERLCD MAQEVFELTGYDRV
Sbjct: 183  IDFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSVERLCDAMAQEVFELTGYDRV 242

Query: 923  MIYKFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVK 1102
            M+YKFHEDDHGEV  EI K GLDPY+GLHYPATDIPQAARFLFMKNKVRMICDCRANHVK
Sbjct: 243  MVYKFHEDDHGEVLAEITKTGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRANHVK 302

Query: 1103 VIQDENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEE-----GSNST 1267
            V+QD+NL  DLTLCGS+LRAPHSCHLQYMENMNSIASLVMS+VVNEG+EE      S+S+
Sbjct: 303  VVQDKNLDFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGEEEEAGPANSSSS 362

Query: 1268 HPDKRKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQ 1447
            + +KRKRLWGLVVCH+TSPRFVPFPLRYACEFL QVFAIHV+KELELENQ LEKNILRTQ
Sbjct: 363  NLEKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVSKELELENQNLEKNILRTQ 422

Query: 1448 TLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDE 1627
            TLLCD+LLRDAPLGIVSQSPNV DLVKCDGA LLYKNK ++LG+TP+DFQIRDIVSWLDE
Sbjct: 423  TLLCDLLLRDAPLGIVSQSPNVTDLVKCDGAVLLYKNKTYKLGLTPNDFQIRDIVSWLDE 482

Query: 1628 YHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKH 1807
            YHRDSTGLSTDSLYDAGFPGAL+LGDA+CG AAV+IT++DWLFWFR+HTAAEIRWGGAKH
Sbjct: 483  YHRDSTGLSTDSLYDAGFPGALSLGDAICGTAAVRITERDWLFWFRAHTAAEIRWGGAKH 542

Query: 1808 EPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSF-KEAESTDSY 1984
            E  EKDDGRKMHPRSSF AFLEVVK+RSLPWKD+EMDAIHSLQLILRNSF KE    D  
Sbjct: 543  EAGEKDDGRKMHPRSSFNAFLEVVKSRSLPWKDFEMDAIHSLQLILRNSFLKEGGEGD-- 600

Query: 1985 AKAIHTKLNDLQ-IEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGL 2161
               + T+L+++Q IEG+QELEAVTSEMVRLIETA+VPILAVDVDG+VNGWN+KIA+LTGL
Sbjct: 601  --LVRTRLSEMQMIEGVQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNSKIAELTGL 658

Query: 2162 PVDNAIGCHFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESG-PITLVVN 2338
             V++AIG HFL LVEDSSA  VS ML+LA++G+EE+NVQFEIKTH + +ES  PITLVVN
Sbjct: 659  GVESAIGRHFLELVEDSSAGVVSRMLELAIQGKEEQNVQFEIKTHDQTTESAPPITLVVN 718

Query: 2339 ACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGW 2518
            ACAS+DVKEN+VGVCFIAQD+TAQK++MDKFTRI+GDYK+I+QNPNPLIPPIFG+DEFGW
Sbjct: 719  ACASKDVKENIVGVCFIAQDITAQKTIMDKFTRIQGDYKSIIQNPNPLIPPIFGSDEFGW 778

Query: 2519 CSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRAS-CRLKNQEAYVNLGIVLNNAVTGQD 2695
            CSEWN AMTK+SGW +DDV+NKML+GE+FGTN+++ CR+KNQEAYVNLGI LNNAVTGQ 
Sbjct: 779  CSEWNPAMTKISGWRKDDVINKMLVGEIFGTNKSNYCRIKNQEAYVNLGIALNNAVTGQH 838

Query: 2696 NEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTA 2875
            +EK+PFGF SR GKYVECLLCVSKK+D EG+V GVFCF            HVQRLSE+ A
Sbjct: 839  SEKMPFGFLSRGGKYVECLLCVSKKMDPEGSVTGVFCFLQLASPELQRALHVQRLSEENA 898

Query: 2876 MKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDL 3055
            +KR +VL+Y+R+E+RNPLSGIIFSRKMMEGTD+D+EQKNLLRTS HCQRQLNKILDDTDL
Sbjct: 899  LKRSRVLAYIRREIRNPLSGIIFSRKMMEGTDLDDEQKNLLRTSGHCQRQLNKILDDTDL 958

Query: 3056 DHIIEGYLDLEMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQ 3235
            DHIIEGYLDLEM+EF LH+VLIASISQVM+KSNGKGI+I D+LAPNLS+ETLYGDSLRLQ
Sbjct: 959  DHIIEGYLDLEMVEFNLHEVLIASISQVMMKSNGKGIVIADNLAPNLSNETLYGDSLRLQ 1018

Query: 3236 QVLAAFLLISVTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMF 3415
            QVLAAFLLISVT TPS G +G+AA LTKDS+G+++QLGHLE RITHSGGGV QQVL QMF
Sbjct: 1019 QVLAAFLLISVTSTPSGGSVGVAAKLTKDSIGQSVQLGHLELRITHSGGGVAQQVLDQMF 1078

Query: 3416 -GDDVDACEEGISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNS 3565
             GD+ +A +EGISLFISRKLVKLMNGDVQYLREAG+STFIIS+ELAIS+N+
Sbjct: 1079 GGDEAEASDEGISLFISRKLVKLMNGDVQYLREAGKSTFIISVELAISNNN 1129


>sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb|AAB21533.2| type A
            phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1836 bits (4756), Expect = 0.0
 Identities = 896/1120 (80%), Positives = 1015/1120 (90%), Gaps = 5/1120 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV---EQRPK 391
            S++  QSST S+RS+HSAR+IAQTS+DAKLHADFEESG SFDYSSSVRVT+V   EQRPK
Sbjct: 3    SSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPK 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SDKVTTAYLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVGE+PV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIG DIRTIFT PS AALQKALGFGEVSLLNP+LVHCK SGKPFYAI+HRVTGSL+IDF
Sbjct: 123  LGIGIDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFH+DDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV+Q
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDKRK 1285
            DE LP DLTLCGS+LRAPH CHLQYMENMNSIASLVM++VVN+GDEEG  S+S+   KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVV H+T+PRF PFPLRYACEFL QVFAI VNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVSHNTTPRFAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            L+RDAPLGIVSQSPN+MDL+KCDGAALLYKNK HRLGM PSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I+DKDWLFW+RSHTAAE+RWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            DGRKMHPRSSFK FLEVVKTRS+PWKDYEMD IHSLQLILRN+FK+A++ +S   +IHTK
Sbjct: 543  DGRKMHPRSSFKGFLEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTK 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            LNDL+I+G+QELEAVT+EMVRLIETASVPI AVDVDG VNGWNTK+A+LTGLPVD AIG 
Sbjct: 603  LNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            H L+LVEDSS D V+ ML+LAL+G+EERNV+FEIKTHG   +S PI+L+VNACAS+DV++
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            +VVGVCFIAQD+T QKS+MDKFTRIEGDY+AI+QNP+PLIPPIFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFS 2725
             ++GW RDDVM+KMLLGEVFGT  A CRLKNQEA+VN G++LNNA+TGQ++EK+PFGFF+
Sbjct: 783  MLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFA 842

Query: 2726 RSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYM 2905
            R GKYVECLLCVSK+LD EGAV G+FCF            HVQRLSEQTA+KRLKVL+Y+
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 2906 RKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 3085
            R+++RNPLSGIIFSRKM+EGT + EEQKN+L TS  CQRQL+KILDDTDLD IIEGYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDL 962

Query: 3086 EMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLIS 3265
            EM+EFKLH+VL+ASISQVM+KSNGK IMI +D+  +L +ETLYGDS RLQQVLA FLL+S
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 3266 VTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEG 3445
            V  TPS G+L I+  LTKD +G+++QL  LEFRI H+GGGVP+++LSQMFG + DA EEG
Sbjct: 1023 VNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEG 1082

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNS 3565
            ISL +SRKLVKLMNG+VQYLREAGRSTFIIS+ELA+++ S
Sbjct: 1083 ISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATKS 1122


>gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]
          Length = 1127

 Score = 1834 bits (4751), Expect = 0.0
 Identities = 898/1123 (79%), Positives = 1029/1123 (91%), Gaps = 9/1123 (0%)
 Frame = +2

Query: 218  MSTQR-GQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHVE---QR 385
            MST R  QSS+NSARS+HSAR+IAQTS+DAKLHA+FEESG SFDYSSSVRVT V+   Q+
Sbjct: 1    MSTSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQK 60

Query: 386  PKSDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEY 565
            P+SDKVTTAYLHQIQK K IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVG++
Sbjct: 61   PRSDKVTTAYLHQIQKAKYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDH 120

Query: 566  PVIGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVI 745
            PV+GIG+DIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSL++
Sbjct: 121  PVLGIGTDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIV 180

Query: 746  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVM 925
            DFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERLCDTM QEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 926  IYKFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1105
            IYKFH+DDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HV+V
Sbjct: 241  IYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRV 300

Query: 1106 IQDENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDK 1279
            +QDE L IDLTLCGS+LRAPHSCHLQYMENMNSIASLVM++VVN+GD+EG  S S    K
Sbjct: 301  VQDEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQK 360

Query: 1280 RKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLC 1459
            RKRLWGL+VCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELENQ++EKNILRTQTLLC
Sbjct: 361  RKRLWGLIVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1460 DMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRD 1639
            DML+RDAPLGIVSQSPN+MDL+KCDGAALL+K+K HRLG+TP+DFQ+ DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLIKCDGAALLFKSKVHRLGITPTDFQLHDIVSWLSEYHMD 480

Query: 1640 STGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDE 1819
            STGLSTDSLYDAGF GALALGDA+CGMA+V+I+DKDWLFWFRSHTAAE+RWGGAKHEPDE
Sbjct: 481  STGLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGAKHEPDE 540

Query: 1820 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSF-KEAESTDSYAKA- 1993
            KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+F KEA++ D+ A A 
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFGKEADTMDTKANAN 600

Query: 1994 -IHTKLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVD 2170
             IH+KLNDL+I+G+QELEAVTSEMVRLIETA+VPILAVDVDG+VNGWNTKIA+LTGL VD
Sbjct: 601  AIHSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVD 660

Query: 2171 NAIGCHFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACAS 2350
             AIG HFL+LVEDSS   V  ML LAL+G+EE+NVQFEIKTHG+RSESGPI+L+VNACAS
Sbjct: 661  EAIGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACAS 720

Query: 2351 RDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 2530
            RDV+E+VVGVCFIAQD+T QK++MDKFTRIEGDY+AI+QNPNPLIPPIFGTDEFGWCSEW
Sbjct: 721  RDVQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEW 780

Query: 2531 NAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLP 2710
            N+AMT +SGW RD+VM+KMLLGEVFGT +A CRLKNQEA+VNLG+VLNNA+TGQ +EK  
Sbjct: 781  NSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAITGQVSEKTR 840

Query: 2711 FGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLK 2890
            FGFF+R+GKYVECLL VSK+LD EGAV G+FCF            H Q+LSEQTAMKRLK
Sbjct: 841  FGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALHFQKLSEQTAMKRLK 900

Query: 2891 VLSYMRKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIE 3070
            VL+Y+R++V+NPLSGI+FSRKM+EGT++ ++QK++L TS  CQ+QL+K+LDDTDLD IIE
Sbjct: 901  VLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLDDTDLDCIIE 960

Query: 3071 GYLDLEMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAA 3250
            GYLDLEM+EFKL +VL ASISQVM KSNGK + I++D+A N+  ETLYGDSLRLQQ+L+ 
Sbjct: 961  GYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNILCETLYGDSLRLQQILSE 1020

Query: 3251 FLLISVTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVD 3430
            FL ++V +TPS GQL +++ LTKD+ G++IQL HLEFR+TH+GGGVP+++L+QMFG + D
Sbjct: 1021 FLSVAVNFTPSGGQLALSSKLTKDNFGESIQLAHLEFRLTHTGGGVPEELLTQMFGSEAD 1080

Query: 3431 ACEEGISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISS 3559
            A E+GISL ISRKLVKLMNGDVQYLREAGRSTFIIS+ELA++S
Sbjct: 1081 ASEDGISLLISRKLVKLMNGDVQYLREAGRSTFIISVELAVAS 1123


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score = 1833 bits (4748), Expect = 0.0
 Identities = 895/1120 (79%), Positives = 1018/1120 (90%), Gaps = 5/1120 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV---EQRPK 391
            S++  QSST SARS+HSAR+IAQT++DAKLHADFEESG SFDYSSSVRVT V   E++PK
Sbjct: 3    SSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPK 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SD+VTTAYL+QIQKGK IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVGE P 
Sbjct: 63   SDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPA 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIG+DIRTIFT PSAAALQKALGFGEVSLLNP+LVHCKTSGKP+YAI+HRVTGSL+IDF
Sbjct: 123  LGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFH+DDHGEV  EI KPGLDPY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV+Q
Sbjct: 243  KFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDKRK 1285
            DE LP DLTLCGS+LRAPH CHLQYMENM+SIASLVM++VVN+GDEEG  S+ST   KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELE+Q+LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            L+R APLGIVSQSPN+MDLVKCDGAALLYKNK HRLGMTPSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAGFPGALALGD VCGMAAV+I+DK WLFW+RSHTAAE+RWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRN+ K+A++ DS    IHTK
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTK 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            LNDL+I+G+QELEAVT+EMVRLIETASVPI AVDVDG +NGWNTKIA+LTGLPVD AIG 
Sbjct: 603  LNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGN 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            H L+LVEDSS D VS ML+LAL+G+EERNV+FEIKTHG   +S PI+L+VNACASRDV +
Sbjct: 663  HLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGD 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            +VVGVCFIAQD+T QK++MDKFTRIEGDY+AI+QNP+PLIPPIFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFS 2725
            K++GW RDDV++KMLLGEVFGT  A CRLKNQEA+VN G+VLNNA+TGQ+  K+ FGFF+
Sbjct: 783  KLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFA 842

Query: 2726 RSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYM 2905
            R+GKYVECLLCVSK+LD EGAV G+FCF            H+QRLSEQTA+KRLKVL+Y+
Sbjct: 843  RNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYI 902

Query: 2906 RKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 3085
            R+++RNPLSGIIFSRKM+EGT++ EEQKN+LRTS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 3086 EMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLIS 3265
            EM+EFKLH+VL+ASISQ+M+KSNGK IMIV+D+  +L +ETLYGDS RLQQVLA FLL+ 
Sbjct: 963  EMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVC 1022

Query: 3266 VTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEG 3445
            V  TPS GQL I+ +LTKD +G+++QL  LE RI+H+GGGVP+++LSQMFG + +A EEG
Sbjct: 1023 VNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASEEG 1082

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNS 3565
            ISL ISRKLVKLMNG+VQYLREAGRSTFIIS+ELA+++ S
Sbjct: 1083 ISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATKS 1122


>gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]
          Length = 1127

 Score = 1832 bits (4746), Expect = 0.0
 Identities = 897/1123 (79%), Positives = 1030/1123 (91%), Gaps = 9/1123 (0%)
 Frame = +2

Query: 218  MSTQR-GQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHVE---QR 385
            MST R  QSS+NSARS+HSAR+IAQTS+DAKLHA+FEESG SFDYSSSVRVT V+   Q+
Sbjct: 1    MSTSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQK 60

Query: 386  PKSDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEY 565
            P+SDKVTTAYLHQIQK K IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVG++
Sbjct: 61   PRSDKVTTAYLHQIQKAKYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDH 120

Query: 566  PVIGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVI 745
            PV+GIG+DIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSL++
Sbjct: 121  PVLGIGTDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIV 180

Query: 746  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVM 925
            DFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERLCDTM QEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 926  IYKFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1105
            IYKFH+DDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HV+V
Sbjct: 241  IYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRV 300

Query: 1106 IQDENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDK 1279
            +QDE L IDLTLCGS+LRAPHSCHLQYMENMNSIASLVM++VVN+GD+EG  S S    K
Sbjct: 301  VQDEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQK 360

Query: 1280 RKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLC 1459
            RKRLWGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELENQ++EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1460 DMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRD 1639
            DML+RDAPLGI+SQSPN+MDL+KCDGAALL+K+K HRLG+TP+DFQ++DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGILSQSPNIMDLIKCDGAALLFKSKVHRLGITPTDFQLQDIVSWLSEYHMD 480

Query: 1640 STGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDE 1819
            STGLSTDSLYDAGF GALALGDA+CGMA+V+I+DKDWLFWFRSHTAAE+RWGGAKHEPDE
Sbjct: 481  STGLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGAKHEPDE 540

Query: 1820 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSF-KEAESTDSYAKA- 1993
            KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+F KEA++ D+ A A 
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFGKEADTMDTKANAN 600

Query: 1994 -IHTKLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVD 2170
             IH+KLNDL+I+G+QELEAVTSEMVRLIETA+VPILAVDVDG+VNGWNTKIA+LTGL VD
Sbjct: 601  AIHSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVD 660

Query: 2171 NAIGCHFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACAS 2350
             AIG HFL+LVEDSS   V  ML LAL+G+EE+NVQFEIKTHG+RSESGPI+L+VNACAS
Sbjct: 661  EAIGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACAS 720

Query: 2351 RDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 2530
            RDV+E+VVGVC IAQD+T QK++MDKFTRIEGDY+AI+QNPNPLIPPIFGTDEFGWCSEW
Sbjct: 721  RDVQESVVGVCLIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEW 780

Query: 2531 NAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLP 2710
            N+AMT +SGW RD+VM+KMLLGEVFGT +A CRLKNQEA+VNLG+VLNNA+TGQ +EK  
Sbjct: 781  NSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAITGQVSEKTR 840

Query: 2711 FGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLK 2890
            FGFF+R+GKYVECLL VSK+LD EGAV G+FCF            H Q+LSEQTAMKRLK
Sbjct: 841  FGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALHFQKLSEQTAMKRLK 900

Query: 2891 VLSYMRKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIE 3070
            VL+Y+R++V+NPLSGI+FSRKM+EGT++ ++QK++L TS  CQ+QL+K+LDDTDLD IIE
Sbjct: 901  VLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLDDTDLDCIIE 960

Query: 3071 GYLDLEMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAA 3250
            GYLDLEM+EFKL +VL ASISQVM KSNGK + I++D+A N+  ETLYGDSLRLQQ+L+ 
Sbjct: 961  GYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNILCETLYGDSLRLQQILSE 1020

Query: 3251 FLLISVTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVD 3430
            FL ++V +TPS GQL +++ LTKD++G++IQL HLEFR+TH+GGGVP+++L+QMFG + D
Sbjct: 1021 FLSVAVNFTPSGGQLALSSKLTKDNLGESIQLAHLEFRLTHTGGGVPEELLTQMFGSEAD 1080

Query: 3431 ACEEGISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISS 3559
            A E+GISL ISRKLVKLMNGDVQYLREAGRSTFIIS+ELA++S
Sbjct: 1081 ASEDGISLLISRKLVKLMNGDVQYLREAGRSTFIISVELAVAS 1123


>gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]
          Length = 1127

 Score = 1830 bits (4739), Expect = 0.0
 Identities = 895/1123 (79%), Positives = 1028/1123 (91%), Gaps = 9/1123 (0%)
 Frame = +2

Query: 218  MSTQR-GQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHVE---QR 385
            MST R  QSS+NSARS+HSAR+IAQTS+DAKLHA+FEESG SFDYSSSVRVT V+   Q+
Sbjct: 1    MSTSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQK 60

Query: 386  PKSDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEY 565
            P+SDKVTTAYLHQIQK K IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVG++
Sbjct: 61   PRSDKVTTAYLHQIQKAKYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDH 120

Query: 566  PVIGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVI 745
            PV+GIG+DIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSL++
Sbjct: 121  PVLGIGTDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIV 180

Query: 746  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVM 925
            DFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERLCDTM QEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 926  IYKFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1105
            IYKFH+DDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HV+V
Sbjct: 241  IYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRV 300

Query: 1106 IQDENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDK 1279
            +QDE L IDLTLCGS+LRAPHSCHLQYMENMNSIASLVM++VVN+GD+EG  S S    K
Sbjct: 301  VQDEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQK 360

Query: 1280 RKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLC 1459
            RKRLWGL+VCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELENQ++EKNILRTQTLLC
Sbjct: 361  RKRLWGLIVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1460 DMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRD 1639
            DML+RDAPLGIVSQSPN+MDL+KCDGAALL+K+K HRLG+TP+DFQ+ DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLIKCDGAALLFKSKVHRLGITPTDFQLHDIVSWLSEYHMD 480

Query: 1640 STGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDE 1819
            STGLSTDSLYDAGF GALALGDA+CGMA+V+I+DKDWLFWFRSHTAAE+RWGG KHEPDE
Sbjct: 481  STGLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGEKHEPDE 540

Query: 1820 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSF-KEAESTDSYAKA- 1993
            KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+F KEA++ D+ A A 
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFGKEADTMDTKANAN 600

Query: 1994 -IHTKLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVD 2170
             IH+KLNDL+I+G+QELEAVTSEMVRLIETA+VPILAVDVDG+VNGWNTKIA+LTGL VD
Sbjct: 601  AIHSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVD 660

Query: 2171 NAIGCHFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACAS 2350
             AIG HFL+LVEDSS   V  ML LAL+G+EE+NVQFEIKTHG+RSESGPI+L+VNACAS
Sbjct: 661  EAIGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACAS 720

Query: 2351 RDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 2530
            RDV+E+VVGVCFIAQD+T QK++MDKFTRIEGDY+AI+QNPNPLIPPIFGTDEFGWCSEW
Sbjct: 721  RDVQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEW 780

Query: 2531 NAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLP 2710
            N+AMT +SGW RD+VM+KMLLGEVFGT +A CRLKNQEA+VNLG+VLNNA+TGQ +EK  
Sbjct: 781  NSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAITGQVSEKTR 840

Query: 2711 FGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLK 2890
            FGFF+R+GKYVECLL VSK+LD EGAV G+FCF              Q+LSEQTAMKRLK
Sbjct: 841  FGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALRFQKLSEQTAMKRLK 900

Query: 2891 VLSYMRKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIE 3070
            VL+Y+R++V+NPLSGI+FSRKM+EGT++ ++QK++L TS  CQ+QL+K+LDDTDLD IIE
Sbjct: 901  VLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLDDTDLDCIIE 960

Query: 3071 GYLDLEMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAA 3250
            GYLDLEM+EFKL +VL ASISQVM KSNGK + I++D+A N+  ETLYGDSLRLQQ+L+ 
Sbjct: 961  GYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNILCETLYGDSLRLQQILSE 1020

Query: 3251 FLLISVTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVD 3430
            FL ++V +TPS GQL +++ LTKD++G++IQL HLEFR+TH+GGGVP+++L+QMFG + D
Sbjct: 1021 FLSVAVNFTPSGGQLALSSKLTKDNLGESIQLAHLEFRLTHTGGGVPEELLTQMFGSEAD 1080

Query: 3431 ACEEGISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISS 3559
            A E+GISL ISRKLVKLMNGD+QYLREAGRSTFIIS+ELA++S
Sbjct: 1081 ASEDGISLLISRKLVKLMNGDIQYLREAGRSTFIISVELAVAS 1123


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1824 bits (4725), Expect = 0.0
 Identities = 898/1114 (80%), Positives = 1007/1114 (90%), Gaps = 4/1114 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV--EQRPKS 394
            S++  QSS+ S RS+HSAR+IAQT+VDAKLHADFEESG+SFDYSSSVR T    +Q+P+S
Sbjct: 3    SSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRS 62

Query: 395  DKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPVI 574
            DKVTTAYLH IQKGK IQPFG LLALDEKTF+VIAYSENAPEMLTMVSHAVPSVGE+PV+
Sbjct: 63   DKVTTAYLHHIQKGKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVL 122

Query: 575  GIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDFE 754
            GIG+D+RTIF+ PSA+AL KALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSL+IDFE
Sbjct: 123  GIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFE 182

Query: 755  PVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIYK 934
            PVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDRVM YK
Sbjct: 183  PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYK 242

Query: 935  FHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQD 1114
            FH+DDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA H++V+QD
Sbjct: 243  FHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQD 302

Query: 1115 ENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDKRKR 1288
            E LP DLTLCGS+LRAPHSCH+QYMENMNSIASLVM++VVN+GDEEG  SNS  P KRKR
Sbjct: 303  EKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKR 362

Query: 1289 LWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDML 1468
            LWGLVVCHHT+PRFVPFPLRYACEFL QVFAIHVNKELELE+Q+LEKNILRTQTLLCDML
Sbjct: 363  LWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDML 422

Query: 1469 LRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDSTG 1648
            +RDAPLGIVSQSPNVMDLVKCDGAALLYKNK  RLG+TPSDFQ+ DI SWL EYH DSTG
Sbjct: 423  MRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTG 482

Query: 1649 LSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKDD 1828
            LSTDSLYDAG+PGALALGDAVCGMAAVKIT KD LFWFRSHTAAE+RWGGAKHEP EKDD
Sbjct: 483  LSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDD 542

Query: 1829 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTKL 2008
            GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+FK++E+ D    AIHTKL
Sbjct: 543  GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKL 602

Query: 2009 NDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGCH 2188
            NDL+IEG+QELEAVTSEMVRLIETASVPILAVDVDG+VNGWNTKI++LT LPVD AIG H
Sbjct: 603  NDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMH 662

Query: 2189 FLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKEN 2368
             L+LVEDSSAD V  ML LAL+G+EE+NVQFEIKTHG + +SGPI+LVVNACASRD+ EN
Sbjct: 663  LLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHEN 722

Query: 2369 VVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMTK 2548
            VVGVCF+AQD+T+QK++MDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN AM K
Sbjct: 723  VVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVK 782

Query: 2549 VSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFSR 2728
            +SGW R++VM+KMLLGEVFGT+ A CRLKN+EA+V LGIVLN+ +TG+++EK+ FGFFS+
Sbjct: 783  LSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSK 842

Query: 2729 SGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYMR 2908
            SGKYVECLL VSKKLD EGAV GVFCF            H+QRLSEQTA+KRLK L+Y++
Sbjct: 843  SGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIK 902

Query: 2909 KEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLE 3088
            ++++NPLSGIIFSRKMME TD+ EEQ+ +L TS  CQRQL+KILDD DLD IIEGYLDLE
Sbjct: 903  RQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLE 962

Query: 3089 MMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLISV 3268
            M+EF L +VL+ASISQVMIKSNGKGI IV+D    + +ETLYGD LRLQQVLA FLLISV
Sbjct: 963  MVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISV 1022

Query: 3269 TYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEGI 3448
             +TP  GQL +AASL KD +G+++ L HLE RITH+G GVP+Q+L+QMFG++ DA EEGI
Sbjct: 1023 NFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGI 1082

Query: 3449 SLFISRKLVKLMNGDVQYLREAGRSTFIISLELA 3550
            SL ISRKLVKLMNGDVQYLREAG+STFIIS+ELA
Sbjct: 1083 SLLISRKLVKLMNGDVQYLREAGKSTFIISIELA 1116


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1823 bits (4722), Expect = 0.0
 Identities = 897/1114 (80%), Positives = 1007/1114 (90%), Gaps = 4/1114 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV--EQRPKS 394
            S++  QSS+ S RS+HSAR+IAQT+VDAKLHADFEESG+SFDYSSSVR T    +Q+P+S
Sbjct: 3    SSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRS 62

Query: 395  DKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPVI 574
            DKVTTAYLH IQKGK IQPFG LLALD+KTF+VIAYSENAPEMLTMVSHAVPSVGE+PV+
Sbjct: 63   DKVTTAYLHHIQKGKLIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVL 122

Query: 575  GIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDFE 754
            GIG+D+RTIF+ PSA+AL KALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSL+IDFE
Sbjct: 123  GIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFE 182

Query: 755  PVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIYK 934
            PVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDRVM YK
Sbjct: 183  PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYK 242

Query: 935  FHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQD 1114
            FH+DDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA H++V+QD
Sbjct: 243  FHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQD 302

Query: 1115 ENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEG--SNSTHPDKRKR 1288
            E LP DLTLCGS+LRAPHSCH+QYMENMNSIASLVM++VVN+GDEEG  SNS  P KRKR
Sbjct: 303  EKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKR 362

Query: 1289 LWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDML 1468
            LWGLVVCHHT+PRFVPFPLRYACEFL QVFAIHVNKELELE+Q+LEKNILRTQTLLCDML
Sbjct: 363  LWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDML 422

Query: 1469 LRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDSTG 1648
            +RDAPLGIVSQSPNVMDLVKCDGAALLYKNK  RLG+TPSDFQ+ DI SWL EYH DSTG
Sbjct: 423  MRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTG 482

Query: 1649 LSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKDD 1828
            LSTDSLYDAG+PGALALGDAVCGMAAVKIT KD LFWFRSHTAAE+RWGGAKHEP EKDD
Sbjct: 483  LSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDD 542

Query: 1829 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTKL 2008
            GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+FK++E+ D    AIHTKL
Sbjct: 543  GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKL 602

Query: 2009 NDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGCH 2188
            NDL+IEG+QELEAVTSEMVRLIETASVPILAVDVDG+VNGWNTKI++LT LPVD AIG H
Sbjct: 603  NDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMH 662

Query: 2189 FLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKEN 2368
             L+LVEDSSAD V  ML LAL+G+EE+NVQFEIKTHG + +SGPI+LVVNACASRD+ EN
Sbjct: 663  LLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDEN 722

Query: 2369 VVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMTK 2548
            VVGVCF+AQD+T+QK++MDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN AM K
Sbjct: 723  VVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVK 782

Query: 2549 VSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFSR 2728
            +SGW R++VM+KMLLGEVFGT+ A CRLKN+EA+V LGIVLN+ +TG+++EK+ FGFFS+
Sbjct: 783  LSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSK 842

Query: 2729 SGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYMR 2908
            SGKYVECLL VSKKLD EGAV GVFCF            H+QRLSEQTA+KRLK L+Y++
Sbjct: 843  SGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIK 902

Query: 2909 KEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLE 3088
            ++++NPLSGIIFSRKMME TD+ EEQ+ +L TS  CQRQL+KILDD DLD IIEGYLDLE
Sbjct: 903  RQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLE 962

Query: 3089 MMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLISV 3268
            M+EF L +VL+ASISQVMIKSNGKGI IV+D    + +ETLYGD LRLQQVLA FLLISV
Sbjct: 963  MVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISV 1022

Query: 3269 TYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEGI 3448
             +TP  GQL +AASL KD +G+++ L HLE RITH+G GVP+Q+L+QMFG++ DA EEGI
Sbjct: 1023 NFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGI 1082

Query: 3449 SLFISRKLVKLMNGDVQYLREAGRSTFIISLELA 3550
            SL ISRKLVKLMNGDVQYLREAG+STFIIS+ELA
Sbjct: 1083 SLLISRKLVKLMNGDVQYLREAGKSTFIISIELA 1116


>ref|XP_007031301.1| Phytochrome A [Theobroma cacao] gi|508719906|gb|EOY11803.1|
            Phytochrome A [Theobroma cacao]
          Length = 1121

 Score = 1803 bits (4671), Expect = 0.0
 Identities = 882/1119 (78%), Positives = 1012/1119 (90%), Gaps = 3/1119 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHVEQRPKSDK 400
            S++   SS+NS RSRHSAR+IAQT+VDAKLHA+FEESG+SFDYSSSVRV+  +Q+P+SD+
Sbjct: 3    SSRPSHSSSNSGRSRHSARIIAQTTVDAKLHANFEESGSSFDYSSSVRVSG-DQQPRSDR 61

Query: 401  VTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPVIGI 580
            VTTAYLHQIQKGK IQPFGCLLALDEKT++VIAYSENAPEMLTMVSHAVPSVG++PV+GI
Sbjct: 62   VTTAYLHQIQKGKFIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGI 121

Query: 581  GSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDFEPV 760
            G+DI+TIFT+PS++AL KALG GEVSLLNPILVHCKTSGKPFYAIIHRVTGSL+IDFEPV
Sbjct: 122  GTDIKTIFTAPSSSALLKALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPV 181

Query: 761  KPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIYKFH 940
            KP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDRVM YKFH
Sbjct: 182  KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFH 241

Query: 941  EDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQDEN 1120
            +DDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMI DC A HVKV QD+ 
Sbjct: 242  DDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVFQDDK 301

Query: 1121 LPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEGS--NSTHPD-KRKRL 1291
            LP DLTLCGS+LRAPHSCHLQYMENMNSIASLVM+++VN+GDEEG   +S  P  KRKRL
Sbjct: 302  LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNDGDEEGDGPDSAQPQQKRKRL 361

Query: 1292 WGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDMLL 1471
            WGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKE+ELENQ++EKNILRTQTLLCDMLL
Sbjct: 362  WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELENQIIEKNILRTQTLLCDMLL 421

Query: 1472 RDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDSTGL 1651
            RDAP+GI+SQSPN+MDLVKCDGAALLYKNK  +LG+TPSDFQ+ +I SWL EYH DSTGL
Sbjct: 422  RDAPMGIISQSPNIMDLVKCDGAALLYKNKIWKLGVTPSDFQLHEIASWLSEYHMDSTGL 481

Query: 1652 STDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKDDG 1831
            STDSLYDAGFPGALALGD VCGMAAV+IT KD LFWFRSHTAAEIRWGGAKHEP EKD+G
Sbjct: 482  STDSLYDAGFPGALALGDVVCGMAAVRITLKDMLFWFRSHTAAEIRWGGAKHEPGEKDNG 541

Query: 1832 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTKLN 2011
            RKMHPRSSFKAFL+VVKTRS+PWKDYEMDAIHSLQLILRN+FK+ E+TD+   AIH+KL+
Sbjct: 542  RKMHPRSSFKAFLQVVKTRSMPWKDYEMDAIHSLQLILRNAFKDVETTDTNTSAIHSKLS 601

Query: 2012 DLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGCHF 2191
            DL+IEG+QELEAVTSEMVRLIETA+VPILAVDVDG+VNGWN KIA+LTGLPVD AIG H 
Sbjct: 602  DLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNMKIAELTGLPVDKAIGKHL 661

Query: 2192 LSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKENV 2371
            L+LVEDSS + V  ML LAL+G+EE+N+QFEIKTHG R E+GPI+LVVNACA+RD+ ENV
Sbjct: 662  LTLVEDSSVETVKQMLVLALQGKEEKNIQFEIKTHGSRIEAGPISLVVNACANRDLHENV 721

Query: 2372 VGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMTKV 2551
            VGVCF+AQD+T QK +MDKFTRIEGDYKAIVQNPNPLIPPIFG DEFGWCSEWN AMTK+
Sbjct: 722  VGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGMDEFGWCSEWNPAMTKL 781

Query: 2552 SGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFSRS 2731
            +GW RD+V++KMLLGEVFGT+ A CRLK+Q+++VNLG+VLNNA+TG + EK+PFGFF+RS
Sbjct: 782  TGWKRDEVVDKMLLGEVFGTHIACCRLKSQDSFVNLGVVLNNAMTGHEPEKVPFGFFARS 841

Query: 2732 GKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYMRK 2911
            GKYVECLLCV+KKLD E AV GVFCF            HVQRLSEQTAMKRLK L+Y+++
Sbjct: 842  GKYVECLLCVNKKLDREDAVTGVFCFLQLASHELQQALHVQRLSEQTAMKRLKALAYLKR 901

Query: 2912 EVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLEM 3091
            ++RNPLSGIIFSRKMMEGT++  EQK LL+TS  CQRQL+KILDD+DLD II+GYLDLEM
Sbjct: 902  QIRNPLSGIIFSRKMMEGTELGPEQKRLLQTSTLCQRQLSKILDDSDLDSIIDGYLDLEM 961

Query: 3092 MEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLISVT 3271
            ++F LH+VL+ASISQVM+KSNGKGI IV+D    + +ETLYGDS+RLQQVLA FLLISV 
Sbjct: 962  IDFTLHEVLVASISQVMMKSNGKGIRIVNDTEEEVMTETLYGDSVRLQQVLADFLLISVN 1021

Query: 3272 YTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEGIS 3451
            +TP+ GQL + ASLTKD +G+++ L HLE RITH+GGGVP+ +LSQMFG D DA EEGIS
Sbjct: 1022 FTPNGGQLVVVASLTKDQLGQSVHLAHLELRITHAGGGVPEALLSQMFGSDGDASEEGIS 1081

Query: 3452 LFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNSQ 3568
            L ISRKLVKLMNGD+QYLREAGRSTFI+++ELA ++ S+
Sbjct: 1082 LLISRKLVKLMNGDIQYLREAGRSTFIVTVELAAANRSR 1120


>ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citrus clementina]
            gi|568853345|ref|XP_006480323.1| PREDICTED: phytochrome
            A-like [Citrus sinensis] gi|557525879|gb|ESR37185.1|
            hypothetical protein CICLE_v10027712mg [Citrus
            clementina]
          Length = 1117

 Score = 1780 bits (4610), Expect = 0.0
 Identities = 869/1113 (78%), Positives = 997/1113 (89%), Gaps = 3/1113 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV---EQRPK 391
            S++  QSS+N+ +SRHSARVIAQT++DAKLHADFE SGTSFDYS+SVRV+     +Q+P+
Sbjct: 3    SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPR 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SD+VTTAYLH IQKGK IQPFGCLLALDEKTF+VIAYSENAPE+LTMV+HAVPSVG++PV
Sbjct: 63   SDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPV 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIGSDI+TIFT+PSA+ALQKALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSL+IDF
Sbjct: 123  LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFHEDDHGEV +EI K GL+PY+GLHYPATDIPQAARFLFMKNKVRMI DCRA HVKV+Q
Sbjct: 243  KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEGSNSTHPDKRKRL 1291
            DE LP DLTLCGS+LRAPHSCHLQYMENMNSIASLVM++VVN+ +EEG N T P KRKRL
Sbjct: 303  DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN-TLPQKRKRL 361

Query: 1292 WGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDMLL 1471
            WGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELE Q+LEKNILRTQTLLCDML+
Sbjct: 362  WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421

Query: 1472 RDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDSTGL 1651
            RDAPLGIV+QSPN+MDLVKCDGAALLYKNK  RLG+TP+DFQ+ DIVSWL EYH DSTGL
Sbjct: 422  RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481

Query: 1652 STDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKDDG 1831
            S DSLYDAG+PGALALGD VCGMAAV+I+ KD +FWFRS TA+E+RWGGAKHEPDEKDDG
Sbjct: 482  SADSLYDAGYPGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541

Query: 1832 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTKLN 2011
            RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+FK+  + D   K+IH+KL 
Sbjct: 542  RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLC 601

Query: 2012 DLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGCHF 2191
            DL+IEG++ELEAVTSEMVRLIETA+VPILAVDVDG+VNGWNTKIA+LTGL VD AIG HF
Sbjct: 602  DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661

Query: 2192 LSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKENV 2371
            L+LVEDSS D V  ML LAL+G+EE+N+QFEIKTHG +    PITL+VNACASRD+ +NV
Sbjct: 662  LTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721

Query: 2372 VGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMTKV 2551
            VGVCF+AQD+T QK++MDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN AM K+
Sbjct: 722  VGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKL 781

Query: 2552 SGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFSRS 2731
            +GW R++V++K+LL EVFGTN A CRLKNQEA+VNLGIVLN A++GQD EK+PFGFF+R+
Sbjct: 782  TGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARN 841

Query: 2732 GKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYMRK 2911
            GKY ECLLCV+KKLD EGAV GVFCF            HVQRLSEQTA+KRLK L+Y ++
Sbjct: 842  GKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKR 901

Query: 2912 EVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLEM 3091
            ++RNPLSGIIFSRKMMEGT++  EQK LL TS  CQRQL+KILDD+DLD II+GYLDLEM
Sbjct: 902  QIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEM 961

Query: 3092 MEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLISVT 3271
            +EF L++VL+ASISQVM+KSN KGI IV++ A  + SETLYGDS+RLQQVLA FL IS+ 
Sbjct: 962  VEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISIN 1021

Query: 3272 YTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEGIS 3451
            + P+ GQL +++SLTKD +G+++ L +LE RITH+GGG+P+ +L QMFG + D  EEGIS
Sbjct: 1022 FVPNGGQLMVSSSLTKDQLGRSVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTSEEGIS 1081

Query: 3452 LFISRKLVKLMNGDVQYLREAGRSTFIISLELA 3550
            L ISRKLVKLMNGDVQYLREAG+STFI+S+ELA
Sbjct: 1082 LLISRKLVKLMNGDVQYLREAGKSTFIVSVELA 1114


>gb|EXB57569.1| Phytochrome type A [Morus notabilis]
          Length = 1130

 Score = 1778 bits (4606), Expect = 0.0
 Identities = 867/1123 (77%), Positives = 998/1123 (88%), Gaps = 6/1123 (0%)
 Frame = +2

Query: 218  MSTQR-GQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRV---THVEQR 385
            MST R   SS+NS RSRHSAR++AQT+VDAKLHA+FEE+G+SFDYSSS+RV   T  +Q+
Sbjct: 1    MSTSRPSHSSSNSGRSRHSARIVAQTTVDAKLHAEFEETGSSFDYSSSIRVSNSTSADQQ 60

Query: 386  PKSDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEY 565
            P+SDKVTTAYLH IQKGK IQPFGCLLALDEKT +VIAYSENAPEMLTMVSHAVPSVG++
Sbjct: 61   PRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTLKVIAYSENAPEMLTMVSHAVPSVGDH 120

Query: 566  PVIGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVI 745
            PV+GIG+D+RTIFT+PSA+ALQKALGFG+VSLLNPILVHCKTSGKPFYAI+HRVTGSL+I
Sbjct: 121  PVLGIGTDVRTIFTAPSASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180

Query: 746  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVM 925
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 926  IYKFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1105
             YKFHEDDHGEV +EI KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMI DC A HVKV
Sbjct: 241  AYKFHEDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 300

Query: 1106 IQDENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEGS--NSTHPDK 1279
             QDE LP DLTLCGS+LRAPHSCHLQYM+NMNSIASLVM++VVNEGD++    NS+ P K
Sbjct: 301  FQDEKLPFDLTLCGSTLRAPHSCHLQYMDNMNSIASLVMAVVVNEGDDDDDSPNSSQPQK 360

Query: 1280 RKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLC 1459
            RKRLWGLVVCH+TSPRFVPFPLRYACEFL QVFAIHVNKELELENQ++EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1460 DMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRD 1639
            DML+RDAPLGIVSQSPN+MDLVKCDGAALLY+NK  RLG+ PSD Q+ DIV WL E+H D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKVWRLGIAPSDSQLHDIVLWLSEHHMD 480

Query: 1640 STGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDE 1819
            STGLSTDSLYDAG+PGA AL D +CGMAAV+IT KD +FWFRSHTAAEI+WGGAKHEP E
Sbjct: 481  STGLSTDSLYDAGYPGAHALDDVICGMAAVRITSKDMIFWFRSHTAAEIQWGGAKHEPGE 540

Query: 1820 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIH 1999
            KDDGRKMHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRN+FK+ E+ DS    I+
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSFPWKDYEMDAIHSLQLILRNAFKDTEALDSNTMTIN 600

Query: 2000 TKLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAI 2179
            T+L DL+ EG+QELEAVTSEMVRLIETA+VPILAVD+DG+VNGWNTKI+DLTGLPV+ AI
Sbjct: 601  TRLTDLKFEGMQELEAVTSEMVRLIETATVPILAVDIDGVVNGWNTKISDLTGLPVEQAI 660

Query: 2180 GCHFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDV 2359
            G H L+LVEDSS + V  ML+LAL+G+EERN+QFEIKTHG RS+SGPI+LVVNACASRD+
Sbjct: 661  GAHLLTLVEDSSTEVVRVMLELALQGKEERNIQFEIKTHGSRSDSGPISLVVNACASRDL 720

Query: 2360 KENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2539
              NVVGVCF+AQD+TAQK+MMDKFTRIEGDYKAIVQN NPLIPPIFG DEFGWCSEWN A
Sbjct: 721  NGNVVGVCFVAQDLTAQKTMMDKFTRIEGDYKAIVQNRNPLIPPIFGADEFGWCSEWNPA 780

Query: 2540 MTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGF 2719
            MTK++GW R++V++KMLLGEVFG +   CRLKNQEA+VNLG+VLNNA+TGQ++EK+PFGF
Sbjct: 781  MTKITGWKREEVIDKMLLGEVFGVSMTCCRLKNQEAFVNLGVVLNNAMTGQESEKVPFGF 840

Query: 2720 FSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLS 2899
            F+R+GKY+ECLLCVSKKLD +GAV GVFCF            HVQRL EQ A KRLK L+
Sbjct: 841  FARNGKYIECLLCVSKKLDRDGAVTGVFCFLQLASLELQQALHVQRLMEQIATKRLKALA 900

Query: 2900 YMRKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYL 3079
            Y+++++RNPLSGIIFSRKMMEGT++  EQK LL TS  CQRQL+KILDD+DLD+IIEGY 
Sbjct: 901  YIKRQIRNPLSGIIFSRKMMEGTELGLEQKQLLHTSAQCQRQLSKILDDSDLDNIIEGYS 960

Query: 3080 DLEMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLL 3259
            DLEM+EF LH++L+A+ SQVM+K   KGI +V+D +   +++TLYGDSLRLQQVLA FLL
Sbjct: 961  DLEMVEFTLHEILVAATSQVMMKIKAKGIRLVEDASEETTNDTLYGDSLRLQQVLADFLL 1020

Query: 3260 ISVTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACE 3439
            ISV +TP+ GQ+ IAA+LTKD +G+++ L  LE R+TH+G G+P+ +L+QMFG D D  E
Sbjct: 1021 ISVNFTPNGGQIVIAANLTKDHLGESVHLVRLELRLTHTGSGIPESLLNQMFGTDGDVSE 1080

Query: 3440 EGISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNSQ 3568
            EGISL ISRKLVKLMNGDVQYL+EAG+STFIIS+ELA +  S+
Sbjct: 1081 EGISLLISRKLVKLMNGDVQYLKEAGKSTFIISVELAAAHKSR 1123


>ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
            gi|223548557|gb|EEF50048.1| phytochrome A, putative
            [Ricinus communis]
          Length = 1124

 Score = 1771 bits (4588), Expect = 0.0
 Identities = 866/1121 (77%), Positives = 996/1121 (88%), Gaps = 5/1121 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTH---VEQRPK 391
            S++   SS+NS RSRHSAR+I+QT+VDAKLHADFEESG+SFDYS+SV VT    ++  P+
Sbjct: 3    SSRPSHSSSNSVRSRHSARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPR 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SDKVTTAYLH IQKGK IQPFGCLLALDEKT++VIAYSENAPEMLTMVSHAVPSVG++PV
Sbjct: 63   SDKVTTAYLHHIQKGKLIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPV 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIG+DIRTIFT+PSA+ALQKALGFG+VSLLNPILVHCKTSGKPFYAI+HRVTGS +IDF
Sbjct: 123  LGIGTDIRTIFTAPSASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAI+RLQSLPSGS+ERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFH+DDHGEV +E+ KPGL+PY+GLHYPATDIPQAARFLFMKNKVRMI DCRA HVKV+Q
Sbjct: 243  KFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEGSNST--HPDKRK 1285
            DE LP++LTLCGS+LRAPHSCHLQYMENM+S+ASLVM++VVNEGDE+  + T   P KRK
Sbjct: 303  DEKLPLELTLCGSTLRAPHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELENQ++EKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            LLRDAPLGI++QSPN+ DLVKCDGAALLYKNK  RLG+TPSD QIRDI  WL EYH DST
Sbjct: 423  LLRDAPLGILTQSPNITDLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAG+  AL+L D VCGMAAV+IT KD LFWFR+ TAAEIRWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGYSAALSLEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+FK+AE+ D+ AKAIH++
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSR 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            L+DL+IEG+QELEAVTSEMVRLIETA+VPILAVDVDG+VNGWNTKIA+LTGLPVD AIG 
Sbjct: 603  LSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGK 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            H L+LVED S D V  ML  AL+G+EE+N+QFEIKTHG + ESGPI+LVVNACASRD+ E
Sbjct: 663  HLLTLVEDGSIDLVKNMLFSALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDISE 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            NVVGVCF+AQD+T QK++MDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN AM 
Sbjct: 723  NVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMA 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFS 2725
            K++GW R++VM+KMLLGEVFG NRA C LKNQEA+VNLG+++NNA+T Q  EK+ F FF+
Sbjct: 783  KLTGWKREEVMDKMLLGEVFGINRACCCLKNQEAFVNLGVLINNAMTSQVPEKVSFSFFA 842

Query: 2726 RSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYM 2905
            R+ KYVECLLCVSKKLD EGAV GVFCF            H+QRLSEQTA+KRLK L+Y+
Sbjct: 843  RNKKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTLAYI 902

Query: 2906 RKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 3085
            +++++NPLSGI+FSRK+ME T++D EQK LL TS  CQRQL+KILDD+D+D I+EGYLDL
Sbjct: 903  KRQIQNPLSGIMFSRKLMEITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVEGYLDL 962

Query: 3086 EMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLIS 3265
            EM+EF LH+VLIA+ISQV IKS GKGI IV+D A  + +ETLYGDS+RLQQVLA FL  S
Sbjct: 963  EMVEFTLHEVLIAAISQVTIKSKGKGIRIVNDAAEVIMTETLYGDSIRLQQVLADFLAAS 1022

Query: 3266 VTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEG 3445
            V +TP  GQL IAA  TKD +G+++ L HLE RITH+GGG+P+ +L+QMFG D D  +EG
Sbjct: 1023 VDFTPPGGQLTIAAKFTKDQLGQSVHLVHLELRITHAGGGIPEPLLNQMFGSDGDVSDEG 1082

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNSQ 3568
            +SLFISRKLVKLMNGDVQYLREAG+S+FI+++ELA    SQ
Sbjct: 1083 VSLFISRKLVKLMNGDVQYLREAGKSSFIVTVELAAGRKSQ 1123


>ref|XP_002318913.1| phytochrome A family protein [Populus trichocarpa]
            gi|222857289|gb|EEE94836.1| phytochrome A family protein
            [Populus trichocarpa]
          Length = 1126

 Score = 1768 bits (4578), Expect = 0.0
 Identities = 867/1121 (77%), Positives = 989/1121 (88%), Gaps = 5/1121 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV---EQRPK 391
            S++   SS+NSARSRHSAR+IAQT+VDAKLHADFEESG+SFDYSSSVRVT     +Q P+
Sbjct: 3    SSRPSHSSSNSARSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPR 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SDKVTT YLH IQKGK IQPFGCLLALDEKTF+V+AYSENAPE+LTMVSHAVPSVGE+PV
Sbjct: 63   SDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPV 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIG+DIRTIFT+PSA+ALQKA+GFG+VSLLNPILVHCKTSGKPFYAI+HRVTGSL+IDF
Sbjct: 123  LGIGTDIRTIFTAPSASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDR M Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFH+DDHGEV +E+ KPG++PY+GLHYPATDIPQA+RFLFMKNKVRMI DC A HVKV+Q
Sbjct: 243  KFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEGS--NSTHPDKRK 1285
            DE LP DLTLCGS+LRAPHSCHLQYMENMNSIASLVM++VVN+GDE+G   +S +P KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVVCH+TSPRFVPFPLRYACEFL QVFAIHVNKELELENQ++EKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            L+RDAPLGIV+QSPN+MDLVKCDGA L Y+NK  RLG+TPSD Q++DI  WL EYH DST
Sbjct: 423  LMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAG+PGALALGD VCGMAAV+IT KD LFWFRS TAAEIRWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            DGR+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+FK+ E+ D   K IH +
Sbjct: 543  DGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHAR 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            L+DL+IEG+QELEAVTSEMVRLIETA+VPILAVDVDG+VNGWNTKI++LTGL VD AIG 
Sbjct: 603  LSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGK 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            H L+LVEDSS D V  ML LAL+G+EE+N+QFEIKTHG +SE GPI LVVNACASRD+ E
Sbjct: 663  HLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHE 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            NVVGVCF+ QD+T QK +MDKFTRIEGDYKAIVQN NPLIPPIFGTDEFGWCSEWN AMT
Sbjct: 723  NVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMT 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFS 2725
             ++GW R++V++KMLLGEVFG N A CRLKNQEA+VNLG+VLN A+TGQ++EK+ FGFF+
Sbjct: 783  NLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFA 842

Query: 2726 RSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYM 2905
            R+GKYVECLLCVSKKLD EGAV GVFCF            HVQRLSEQTA+KRLK L+Y+
Sbjct: 843  RTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYL 902

Query: 2906 RKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 3085
            ++++ NPLSGIIFS KMMEGT++  EQK LL TS  CQ QL+KILDD+DLD IIEGYLDL
Sbjct: 903  KRQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDL 962

Query: 3086 EMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLIS 3265
            EM+EF L +VL+A+ SQVM+KSN KGI I++D A    +ETLYGDS+RLQQVLA FL +S
Sbjct: 963  EMVEFTLREVLVAATSQVMMKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQMS 1022

Query: 3266 VTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEG 3445
            V +TPS G L ++ASLTKD +G+++ L HLE RI H G G+P+ +L QMFG+D DA  EG
Sbjct: 1023 VNFTPSGGLLSVSASLTKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMFGEDTDASVEG 1082

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRSTFIISLELAISSNSQ 3568
            ISL ISRKLVKLMNGDV+Y+REAG+S+FIIS+ELA    SQ
Sbjct: 1083 ISLVISRKLVKLMNGDVRYMREAGKSSFIISVELAGGHKSQ 1123


>gb|AEK26583.1| phytochrome A [Populus tremula]
          Length = 1109

 Score = 1753 bits (4541), Expect = 0.0
 Identities = 858/1107 (77%), Positives = 980/1107 (88%), Gaps = 5/1107 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV---EQRPK 391
            S++   SS+NSARSRHSAR+IAQT+VDAKLHADFEESG+SFDYSSSVRVT     +Q P+
Sbjct: 3    SSRPSHSSSNSARSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPR 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SDKVTTAYLH IQKGK IQPFGCLLALDEKTFRV+AYSENAPE+LTMVSHAVPSVGE+PV
Sbjct: 63   SDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPV 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIG+DIRTIFT+PSA+ALQKA+GFG+VSLLNPILVHCKTSGKPFYAI+HRVTGSL+IDF
Sbjct: 123  LGIGTDIRTIFTAPSASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM QEVFELTGYDR M Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFH+DDHGEV +E+ KPG++PY+GLHYPATDIPQA+RFLFMKNKVRMI DC A HVKV+Q
Sbjct: 243  KFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEEGS--NSTHPDKRK 1285
            DE LP DLTLCGS+LRAPHSCHLQYMENMNSIASLVM++VVN+GDE+G   +S +P KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVVCH+TSPRFVPFPLRYACEFL QVFAIHVNKELELENQ++EKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            L+RDAPLGIV+QSPN+MDLVKCDGA L Y+NK  RLG+TPSD Q++DI  WL EYH DST
Sbjct: 423  LMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAG+PGALALGD VCGMAAV+IT KD LFWFRS TAAEIRWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            DGR+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+FK+ E+ D   K IH +
Sbjct: 543  DGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHAR 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            L+DL+IEG+QELEAVTSEMVRLIETA+VPILAVDVDG+VNGWNTKI++LTGL VD AIG 
Sbjct: 603  LSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGK 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            H L+LVEDSS D V  ML LAL+G+EE+N+QFEIKTHG +SE GPI LVVNACASRD+ E
Sbjct: 663  HLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHE 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            NVVGVCF+ QD+T QK +MDKFTRIEGDYKAIVQN NPLIPPIFGTDEFGWCSEWN AMT
Sbjct: 723  NVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMT 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFS 2725
             ++GW R++V++KMLLGEVFG N A CRLKNQEA+VNLG+VLN A+TGQ++EK+ FGFF+
Sbjct: 783  NLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFA 842

Query: 2726 RSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYM 2905
            R+GKYVECLLCVSKKLD EGAV GVFCF            HVQRLSEQTA+KRLK L+Y+
Sbjct: 843  RTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYL 902

Query: 2906 RKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 3085
            +K++ NPLSGIIFS KMMEGT++  EQK LL TS  CQ QL+KILDD+DLD IIEGYLDL
Sbjct: 903  KKQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDL 962

Query: 3086 EMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLIS 3265
            EM+EF L +VL+A+ SQVM+KSN KGI I++D A  + +ETLYGDS+RLQQVLA FLL+S
Sbjct: 963  EMVEFTLREVLVAATSQVMMKSNEKGIRIINDAAEEMMAETLYGDSIRLQQVLADFLLMS 1022

Query: 3266 VTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEG 3445
            V +TPS G L ++AS +KD +G+++ L HLE RI H G G+P+ +L QM+G+D  A  EG
Sbjct: 1023 VNFTPSGGLLTVSASFSKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMYGEDTGASVEG 1082

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRST 3526
            ISL ISRKLVKLMNGDV+Y+REAG+S+
Sbjct: 1083 ISLVISRKLVKLMNGDVRYMREAGKSS 1109


>ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesca subsp. vesca]
          Length = 1124

 Score = 1752 bits (4537), Expect = 0.0
 Identities = 860/1115 (77%), Positives = 987/1115 (88%), Gaps = 5/1115 (0%)
 Frame = +2

Query: 221  STQRGQSSTNSARSRHSARVIAQTSVDAKLHADFEESGTSFDYSSSVRVTHV---EQRPK 391
            S++   SS+NS RSRHSARVIAQT+VDAKLHA+FEESG+SFDYS+SVRV+     +Q+P+
Sbjct: 3    SSRPSHSSSNSGRSRHSARVIAQTTVDAKLHANFEESGSSFDYSNSVRVSSEVTGDQQPR 62

Query: 392  SDKVTTAYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEYPV 571
            SDKVTTAYLH IQKGK IQPFGCLLALD+KTFRVIAYSENAPEMLTMVSHAVPSVG++PV
Sbjct: 63   SDKVTTAYLHHIQKGKLIQPFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 122

Query: 572  IGIGSDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDF 751
            +GIG+D+RTIFT PSA+AL KALGFGEVSLLNPILVHCK+SGKPFYAI+HRVTGSLVIDF
Sbjct: 123  LGIGTDVRTIFTGPSASALHKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVIDF 182

Query: 752  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMAQEVFELTGYDRVMIY 931
            EPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVMAY 242

Query: 932  KFHEDDHGEVFTEIRKPGLDPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVIQ 1111
            KFH+DDHGEV  E+ KPGL+PY+GLHYP+TDIPQA+RFLFMKNKVRMI DC A +VKV+Q
Sbjct: 243  KFHDDDHGEVVAELTKPGLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKVLQ 302

Query: 1112 DENLPIDLTLCGSSLRAPHSCHLQYMENMNSIASLVMSIVVNEGDEE--GSNSTHPDKRK 1285
            DE LP+DLTLCGS+LRAPHSCHLQYMENMNSIASLVM++V+NEGD+E  G +S    KRK
Sbjct: 303  DEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINEGDDEVAGPDSAQTQKRK 362

Query: 1286 RLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1465
            RLWGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELE+QM+EKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLCDM 422

Query: 1466 LLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKHRLGMTPSDFQIRDIVSWLDEYHRDST 1645
            LLRDAPLGIVSQ+PN+MDLVKCDGAALLYKNK  RLG+TPSDFQI+DI  WL E H DST
Sbjct: 423  LLRDAPLGIVSQTPNIMDLVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMDST 482

Query: 1646 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPDEKD 1825
            GLSTDSLYDAGFPGALALGD VCGMAAVKIT KD +FWFRSHTAAEIRWGGAKH+PDEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDVVCGMAAVKITSKDIIFWFRSHTAAEIRWGGAKHDPDEKD 542

Query: 1826 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSFKEAESTDSYAKAIHTK 2005
            +G KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN+FK+    D     I  +
Sbjct: 543  NGWKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGDMDVNNNGIQMQ 602

Query: 2006 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWNTKIADLTGLPVDNAIGC 2185
            L+DL+I+G+QELEAVT EMVRLIETASVPILAVD++G VNGWNTKI++LTGLPVD AIG 
Sbjct: 603  LSDLKIDGVQELEAVTGEMVRLIETASVPILAVDIEGSVNGWNTKISELTGLPVDKAIGK 662

Query: 2186 HFLSLVEDSSADAVSTMLKLALKGEEERNVQFEIKTHGERSESGPITLVVNACASRDVKE 2365
            + L+LVE+SS   V  ML+LAL+G+EE+N+QFEIKTHG R++ GPI+LVVNACASRD+ E
Sbjct: 663  NLLTLVEESSTIMVGRMLELALQGKEEQNIQFEIKTHGARADFGPISLVVNACASRDIHE 722

Query: 2366 NVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2545
            NVVGVCF+AQD+T QK++MDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN AMT
Sbjct: 723  NVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMT 782

Query: 2546 KVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAVTGQDNEKLPFGFFS 2725
            K +GW R++VM+KMLLGEVFG + A C LKNQEA+VNLG+V+N A+TG+ +EK+PFGF++
Sbjct: 783  KSTGWKREEVMDKMLLGEVFGIHMACCPLKNQEAFVNLGVVINRAMTGEVSEKVPFGFWN 842

Query: 2726 RSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLSEQTAMKRLKVLSYM 2905
            R GKY ECLLCVSKKLD+EGAV GVFCF            HVQRLSEQTA+KR K L+Y+
Sbjct: 843  RGGKYTECLLCVSKKLDSEGAVTGVFCFLQLASLELQQALHVQRLSEQTAVKRFKALAYI 902

Query: 2906 RKEVRNPLSGIIFSRKMMEGTDMDEEQKNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 3085
            ++++RNPLSGI+FSRKM+EGT++  EQK L+ TS  CQ+QL+KILDD+DLD II+GYLDL
Sbjct: 903  KRQIRNPLSGILFSRKMIEGTELGAEQKQLIHTSAQCQQQLSKILDDSDLDSIIDGYLDL 962

Query: 3086 EMMEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDSLRLQQVLAAFLLIS 3265
            EM+EF L +VL+ASISQVMIKS+ K I IV D    + +ETLYGDSLRLQQVLA FL +S
Sbjct: 963  EMVEFTLQEVLVASISQVMIKSSAKSIRIVQDANEEIMTETLYGDSLRLQQVLADFLSVS 1022

Query: 3266 VTYTPSRGQLGIAASLTKDSMGKTIQLGHLEFRITHSGGGVPQQVLSQMFGDDVDACEEG 3445
            V Y PS GQL +A +LTKD +G+++ L HLEFRI+H+GGG+P+ +L+QMFG D D  EEG
Sbjct: 1023 VNYMPSGGQLTLATNLTKDQLGQSVHLAHLEFRISHAGGGIPEGLLNQMFGTDGDISEEG 1082

Query: 3446 ISLFISRKLVKLMNGDVQYLREAGRSTFIISLELA 3550
            ISL ISRKLVKLMNGDVQYLREAG+S+FIIS ELA
Sbjct: 1083 ISLLISRKLVKLMNGDVQYLREAGKSSFIISAELA 1117