BLASTX nr result
ID: Mentha29_contig00015728
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00015728
(788 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365562.1| PREDICTED: DNA-directed RNA polymerase V sub... 269 1e-69
ref|XP_006341489.1| PREDICTED: DNA-directed RNA polymerase V sub... 267 4e-69
ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II su... 261 2e-67
ref|XP_006358119.1| PREDICTED: DNA-directed RNA polymerase V sub... 261 3e-67
gb|EYU32997.1| hypothetical protein MIMGU_mgv1a014843mg [Mimulus... 250 4e-64
ref|XP_006357319.1| PREDICTED: DNA-directed RNA polymerase V sub... 247 3e-63
gb|EPS63140.1| hypothetical protein M569_11648, partial [Genlise... 245 2e-62
ref|XP_007010864.1| RNA polymerase Rpb7-like, N-terminal domain ... 242 1e-61
emb|CBI26363.3| unnamed protein product [Vitis vinifera] 241 2e-61
ref|XP_004288438.1| PREDICTED: DNA-directed RNA polymerase II su... 241 3e-61
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su... 240 5e-61
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su... 239 6e-61
ref|XP_007010861.1| RNA polymerase Rpb7-like, N-terminal domain ... 239 1e-60
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep... 239 1e-60
ref|XP_007010866.1| RNA polymerase Rpb7-like, N-terminal domain ... 238 2e-60
gb|AFK40333.1| unknown [Lotus japonicus] 236 5e-60
gb|ABK95475.1| unknown [Populus trichocarpa] 234 2e-59
ref|XP_004296687.1| PREDICTED: DNA-directed RNA polymerase II su... 234 3e-59
ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-contai... 234 3e-59
ref|XP_007144077.1| hypothetical protein PHAVU_007G126700g [Phas... 231 2e-58
>ref|XP_006365562.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
tuberosum]
Length = 180
Score = 269 bits (687), Expect = 1e-69
Identities = 129/176 (73%), Positives = 152/176 (86%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
MYLKS+LSWNV+IPAE+LD LMLQKAI+ RLM D+AAKKASK LGYF+ALTT+E+IGE
Sbjct: 1 MYLKSQLSWNVIIPAENLDVEGLMLQKAIVIRLMDDFAAKKASKNLGYFMALTTLERIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV FSC+TFKI GEILEGVVDKILK GVFL+CGP + V+LSHQKM D
Sbjct: 61 GKVREHTGDVLFPVEFSCVTFKIFRGEILEGVVDKILKHGVFLRCGPTDKVYLSHQKMAD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
YKYVPGENP FMNEK S+IEK VVRF+V+G +++E EK F+ V SLEG YLGP+S
Sbjct: 121 YKYVPGENPIFMNEKMSRIEKDTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 176
>ref|XP_006341489.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
tuberosum]
Length = 180
Score = 267 bits (682), Expect = 4e-69
Identities = 128/176 (72%), Positives = 152/176 (86%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
MYLKS+LSWNV+IPAE+LD LMLQKAI+ RL+ D+A+KKASK LGYF+ALTT+E+IGE
Sbjct: 1 MYLKSQLSWNVIIPAENLDVEGLMLQKAIVIRLLDDFASKKASKNLGYFMALTTLERIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV FSCITFKI GEILEGVVDKILK GVFL+CGP + V+LSHQKM D
Sbjct: 61 GKVREHTGDVLFPVEFSCITFKIFRGEILEGVVDKILKHGVFLRCGPTDKVYLSHQKMAD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
YKYVPGENP FMNEK S+IEK VVRF+V+G +++E EK F+ V SLEG YLGP+S
Sbjct: 121 YKYVPGENPIFMNEKMSRIEKDTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 176
>ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Solanum lycopersicum]
Length = 180
Score = 261 bits (668), Expect = 2e-67
Identities = 124/176 (70%), Positives = 152/176 (86%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LKS+LSWNV+IPAE+LD LMLQKAI+ RL+ D+A+KKASK LGYF+A+TT+E+IGE
Sbjct: 1 MFLKSQLSWNVIIPAENLDVEGLMLQKAIVIRLLDDFASKKASKSLGYFMAVTTLERIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV FSCITFKI GEIL+GVV+KILK GVFL+CGP + V+LSHQKM D
Sbjct: 61 GKVREHTGDVLFPVEFSCITFKIFRGEILDGVVEKILKHGVFLRCGPTDKVYLSHQKMAD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
YKYVPGENP FMNEK S+IEK VVRF+V+G +++E EK F+ V SLEG YLGP+S
Sbjct: 121 YKYVPGENPIFMNEKMSRIEKDTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 176
>ref|XP_006358119.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
tuberosum]
Length = 180
Score = 261 bits (666), Expect = 3e-67
Identities = 125/176 (71%), Positives = 149/176 (84%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
MY+KS+LSWNV+IPAE+LD LMLQKAI+ RLM D+A+KKASK LGYF+ALT++E+IGE
Sbjct: 1 MYVKSQLSWNVIIPAENLDVEGLMLQKAIVIRLMDDFASKKASKNLGYFMALTSLERIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR +GDV+FPV FSC+TFK+ GEILEGVVDKILK GVFL+CGP V+LSHQKM D
Sbjct: 61 GKVRDHTGDVLFPVEFSCLTFKLFRGEILEGVVDKILKHGVFLRCGPTNKVYLSHQKMAD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
YKYVPGENP FMNEK S+IEK VVRF+V G +++E EK F+ V SLEG YLGP+S
Sbjct: 121 YKYVPGENPIFMNEKMSRIEKHTVVRFIVFGARYVEAEKEFQAVVSLEGDYLGPIS 176
>gb|EYU32997.1| hypothetical protein MIMGU_mgv1a014843mg [Mimulus guttatus]
Length = 176
Score = 250 bits (639), Expect = 4e-64
Identities = 119/176 (67%), Positives = 148/176 (84%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
MY+KSK++WNVV+PAE+LD LMLQKAIITRLM+++AAKKASK+LGYFL +TTV IGE
Sbjct: 1 MYVKSKMTWNVVLPAENLDIKGLMLQKAIITRLMSEFAAKKASKDLGYFLTVTTVGSIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR++SG V+FPV FSC+TFK+L GE+LEGVV I+ GVFL+CGP VFLSH M D
Sbjct: 61 GKVRQESGGVLFPVDFSCLTFKMLVGEVLEGVVYTIINKGVFLRCGPARNVFLSHTMMKD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y++VPGENPYF + KSSKIEKGV VRF+V+G+KF+E EK F+ + S+ G YLGP+S
Sbjct: 121 YRFVPGENPYFTSPKSSKIEKGVTVRFVVLGQKFVEAEKDFQALVSINGDYLGPIS 176
>ref|XP_006357319.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
tuberosum]
Length = 213
Score = 247 bits (631), Expect = 3e-63
Identities = 126/208 (60%), Positives = 158/208 (75%), Gaps = 1/208 (0%)
Frame = -1
Query: 761 YSIENFFLKVLERRRRIHSGFQDYQVVVSRNMYLKSKLSWNVVIPAESLDGGTLMLQKAI 582
Y I+N FL R + + F + +YLKS+LSWNV+I A LD +ML KAI
Sbjct: 11 YEIQNIFL-TFHTRIAVTAWFFE--------IYLKSQLSWNVIIHAGILDVEGVMLPKAI 61
Query: 581 ITRLMTDYAAKKASKELGYFLALTTVEKIGEGKVRKQSGDVIFPVSFSCITFKILPGEIL 402
++RLM D+AAKKASK LGYF++LTT+E+IGEGKV++ + DV+FPV FSC+TFK+ GEIL
Sbjct: 62 VSRLMDDFAAKKASKNLGYFMSLTTLERIGEGKVQEHTDDVLFPVEFSCVTFKMFRGEIL 121
Query: 401 EG-VVDKILKPGVFLKCGPVETVFLSHQKMDDYKYVPGENPYFMNEKSSKIEKGVVVRFL 225
EG VVD I K GVFL+CGP + V+LSHQKM DYKYVPGENP FMNEK S+IEK VVRF+
Sbjct: 122 EGRVVDNIFKHGVFLRCGPTDKVYLSHQKMADYKYVPGENPIFMNEKMSRIEKDTVVRFI 181
Query: 224 VIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
V+G +++E EK F+ VGSLEG YLGP+S
Sbjct: 182 VVGARYVEAEKEFQAVGSLEGDYLGPIS 209
>gb|EPS63140.1| hypothetical protein M569_11648, partial [Genlisea aurea]
Length = 179
Score = 245 bits (625), Expect = 2e-62
Identities = 117/178 (65%), Positives = 149/178 (83%)
Frame = -1
Query: 674 RNMYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKI 495
+ M+L+SKLSWNVV+ +E L+ L LQKAIIT L++ +AAKKASK+ GY LA+TTV++I
Sbjct: 2 KKMFLQSKLSWNVVLSSEKLETEGLKLQKAIITHLLSVFAAKKASKDHGYLLAVTTVDRI 61
Query: 494 GEGKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKM 315
GEG+VR+ SG+V+FPV FSC+ F++ GEILEG V KILK GVF++CGPVE V+L+HQKM
Sbjct: 62 GEGRVRQHSGEVLFPVEFSCVAFRMATGEILEGTVHKILKHGVFMRCGPVENVYLTHQKM 121
Query: 314 DDYKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
DY+YVPGENPYFMN KSS+IE+G VVRFLV+G KF+E EK F+ V SL+G YLGP+S
Sbjct: 122 KDYEYVPGENPYFMNAKSSRIERGGVVRFLVMGVKFVENEKEFQAVASLDGDYLGPLS 179
>ref|XP_007010864.1| RNA polymerase Rpb7-like, N-terminal domain [Theobroma cacao]
gi|508727777|gb|EOY19674.1| RNA polymerase Rpb7-like,
N-terminal domain [Theobroma cacao]
Length = 176
Score = 242 bits (617), Expect = 1e-61
Identities = 118/176 (67%), Positives = 145/176 (82%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK +L WNV+IPA+SL LMLQKAI+ RL+ D+A KKA+K+LGYF+A+TT+E IG+
Sbjct: 1 MFLKVQLPWNVIIPADSLGAKGLMLQKAIVVRLLDDFACKKATKDLGYFIAVTTLESIGD 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV FS ITFK+ GEILEGVV KILK GVFL+CGPV+ ++LSH KM D
Sbjct: 61 GKVRQNTGDVLFPVVFSGITFKMFRGEILEGVVHKILKHGVFLRCGPVQNIYLSHLKMPD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y YVPGEN FMNEK SKIEK VVVRF+VIG K++E E+ F+ + SLEG YLGPVS
Sbjct: 121 YHYVPGENAIFMNEKHSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 176
>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 241 bits (616), Expect = 2e-61
Identities = 119/193 (61%), Positives = 151/193 (78%)
Frame = -1
Query: 719 RRIHSGFQDYQVVVSRNMYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKAS 540
RRI + V M+LK +L WNV+IPAE LD LMLQ++II RL+ ++ KKA+
Sbjct: 49 RRISPDSEPLLVRWKTEMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKAT 108
Query: 539 KELGYFLALTTVEKIGEGKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFL 360
+ELGYFLA+TT+E IGEGKVR+ SGDV+FPV FSC+TFK+ GEIL+GVV K+LK GV L
Sbjct: 109 QELGYFLAVTTLENIGEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVIL 168
Query: 359 KCGPVETVFLSHQKMDDYKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRV 180
+CGPVE ++LS QKM DY+YVPGENP F+NEK SKIEK VVVRF+V+G K++E E+ F+
Sbjct: 169 RCGPVENIYLSCQKMPDYRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQA 228
Query: 179 VGSLEGHYLGPVS 141
+ SLEG YLGP+S
Sbjct: 229 LVSLEGDYLGPLS 241
>ref|XP_004288438.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform
1 [Fragaria vesca subsp. vesca]
gi|470104073|ref|XP_004288439.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like isoform 2 [Fragaria
vesca subsp. vesca]
Length = 187
Score = 241 bits (614), Expect = 3e-61
Identities = 116/176 (65%), Positives = 143/176 (81%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK++L WNVVIPAESLD LMLQKAII RL+ D+A +KA+K+LGY LALTTVEKIGE
Sbjct: 1 MFLKTELQWNVVIPAESLDAKGLMLQKAIIVRLLDDFAERKATKDLGYLLALTTVEKIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV+FS I+FK+ GEIL+GVV K+LK GV L+CGP+E V+LS KM D
Sbjct: 61 GKVRQHTGDVLFPVTFSAISFKLFRGEILKGVVHKVLKQGVILRCGPIENVYLSSSKMPD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y YVPGENP F+N KSSKIEKG +RF+VIG K++E E+ F+ + L YLGPVS
Sbjct: 121 YNYVPGENPIFLNAKSSKIEKGTTLRFIVIGAKWLEAEREFQALVGLHADYLGPVS 176
>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
vinifera] gi|147822056|emb|CAN61549.1| hypothetical
protein VITISV_043525 [Vitis vinifera]
Length = 177
Score = 240 bits (612), Expect = 5e-61
Identities = 115/176 (65%), Positives = 146/176 (82%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK +L WNV+IPAE LD LMLQ++II RL+ ++ KKA++ELGYFLA+TT+E IGE
Sbjct: 1 MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ SGDV+FPV FSC+TFK+ GEIL+GVV K+LK GV L+CGPVE ++LS QKM D
Sbjct: 61 GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y+YVPGENP F+NEK SKIEK VVVRF+V+G K++E E+ F+ + SLEG YLGP+S
Sbjct: 121 YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQALVSLEGDYLGPLS 176
>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Cucumis sativus] gi|449522228|ref|XP_004168129.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Cucumis sativus]
Length = 175
Score = 239 bits (611), Expect = 6e-61
Identities = 118/176 (67%), Positives = 148/176 (84%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK +L WNV+IPAE+LD LMLQ++II RL+ ++A KKA+K+LGYFLA+TT+E IGE
Sbjct: 1 MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR Q+GDV+FPV FS ITFK+ GEILEGVV K+LK GVFL+CGPVE ++LS+ KM D
Sbjct: 61 GKVR-QTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y+YVPGENP F+N+K SKIEK VVVRF+VIG K++E E+ F+ + SLEG YLGPVS
Sbjct: 120 YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 175
>ref|XP_007010861.1| RNA polymerase Rpb7-like, N-terminal domain isoform 1 [Theobroma
cacao] gi|590568672|ref|XP_007010862.1| RNA polymerase
Rpb7-like, N-terminal domain isoform 2, partial
[Theobroma cacao] gi|508727774|gb|EOY19671.1| RNA
polymerase Rpb7-like, N-terminal domain isoform 1
[Theobroma cacao] gi|508727775|gb|EOY19672.1| RNA
polymerase Rpb7-like, N-terminal domain isoform 2,
partial [Theobroma cacao]
Length = 176
Score = 239 bits (609), Expect = 1e-60
Identities = 116/176 (65%), Positives = 144/176 (81%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK +L WNV+IPA+SL LMLQKAI+ L+ D+A KKA+K+LGYF+A+TT+E IG+
Sbjct: 1 MFLKVQLPWNVIIPADSLGAKGLMLQKAIVVHLLDDFACKKATKDLGYFIAVTTLESIGD 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV FS ITFK+ GEILEGVV KILK GVFL+CGPV+ ++LSH KM D
Sbjct: 61 GKVRQNTGDVLFPVVFSGITFKMFRGEILEGVVHKILKHGVFLRCGPVQNIYLSHLKMPD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y YVPGEN FMN+K SKIEK VVVRF+VIG K++E E+ F+ + SLEG YLGPVS
Sbjct: 121 YHYVPGENAIFMNDKHSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 176
>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
[Ricinus communis] gi|223538083|gb|EEF39694.1|
DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
putative [Ricinus communis]
Length = 176
Score = 239 bits (609), Expect = 1e-60
Identities = 115/176 (65%), Positives = 146/176 (82%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
MYLK +L WNV+I AE LD LMLQ++II RL+ D+A+KKA+K+LGY+LA+TT+E IGE
Sbjct: 1 MYLKVQLPWNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV F+ ITFKI GEILEGVV K+LK GVF++CGP+E ++LS KM D
Sbjct: 61 GKVREHTGDVLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y YVPGENP F+N+K+SKIEK VVVRF+VIG K++E E+ F+ + SLEG YLGPVS
Sbjct: 121 YHYVPGENPVFLNDKTSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 176
>ref|XP_007010866.1| RNA polymerase Rpb7-like, N-terminal domain [Theobroma cacao]
gi|508727779|gb|EOY19676.1| RNA polymerase Rpb7-like,
N-terminal domain [Theobroma cacao]
Length = 176
Score = 238 bits (606), Expect = 2e-60
Identities = 117/176 (66%), Positives = 143/176 (81%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK +L WNV+IPA+SL LMLQKAI+ RL D+A KKA+K+LGYF+A+TT+E IG+
Sbjct: 1 MFLKVQLPWNVIIPADSLGAEGLMLQKAIVVRLWDDFACKKATKDLGYFIAVTTLESIGD 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV FPV FS ITFK+ GEILEGVV KILK GVFL+CGPV+ ++LSH KM D
Sbjct: 61 GKVRQNTGDVPFPVVFSGITFKMFRGEILEGVVHKILKHGVFLRCGPVQNIYLSHLKMPD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y YVPGEN FMN+K SKIEK VVVRF+VIG K++E E+ F+ + SLEG YLGPVS
Sbjct: 121 YHYVPGENAIFMNDKHSKIEKDVVVRFIVIGTKWLEAEREFQALFSLEGDYLGPVS 176
>gb|AFK40333.1| unknown [Lotus japonicus]
Length = 180
Score = 236 bits (603), Expect = 5e-60
Identities = 110/176 (62%), Positives = 148/176 (84%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK +LSWNV+I AE+L G+LMLQ+AI+ RL+ D+AAK+A+K+LGYF A+TT++K+GE
Sbjct: 1 MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV F+ +TFK+ GEILEGVV K+LK GVFL+CGP+E V+LS+ KM D
Sbjct: 61 GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSNMKMAD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y+Y PGEN YFMNEK+SKI K V +RF+VIG K++E E+ F+ + SLEG YLGP++
Sbjct: 121 YRYFPGENAYFMNEKASKIAKDVTIRFVVIGTKWMEAEREFQALVSLEGDYLGPIA 176
>gb|ABK95475.1| unknown [Populus trichocarpa]
Length = 176
Score = 234 bits (598), Expect = 2e-59
Identities = 111/176 (63%), Positives = 146/176 (82%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK +L WNV+IPAE+LD LMLQ++I+ L+ D+A K+A+K+LGY+LA++T+E IGE
Sbjct: 1 MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVCLLADFAKKRATKDLGYYLAVSTLESIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV FS ITFKI GEILEGVV K+LK GV L+CGP+E ++LS KM D
Sbjct: 61 GKVRQHTGDVLFPVVFSGITFKIFKGEILEGVVHKVLKHGVLLRCGPIENIYLSSMKMLD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y+YVPGENP F+N+K+SKIEK VVVRF+V+G K++E E+ F+ + SLEG YLGPVS
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQALVSLEGDYLGPVS 176
>ref|XP_004296687.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform
1 [Fragaria vesca subsp. vesca]
gi|470121248|ref|XP_004296688.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like isoform 2 [Fragaria
vesca subsp. vesca]
Length = 176
Score = 234 bits (597), Expect = 3e-59
Identities = 113/175 (64%), Positives = 139/175 (79%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK++L WNVVIPAESLD LMLQKAI RL+ D+A +KA+K+LGY LALTTVEKIGE
Sbjct: 1 MFLKTELQWNVVIPAESLDAKGLMLQKAIFVRLLDDFAKRKATKDLGYLLALTTVEKIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV+F I+FKI GEILEGVV +LK GV L+CGP+E V+LS KM D
Sbjct: 61 GKVRQHTGDVLFPVTFCAISFKIFRGEILEGVVQNVLKQGVILRCGPIENVYLSSSKMPD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPV 144
Y YVPGENP F+N+K SKIEKGV +R +VIG K++E E+ F+ + L YLGPV
Sbjct: 121 YNYVPGENPVFLNDKMSKIEKGVTLRCIVIGAKWLEAEREFQALVGLHADYLGPV 175
>ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-containing family protein
[Populus trichocarpa] gi|222852388|gb|EEE89935.1| RNA
polymerase Rpb7 N-terminal domain-containing family
protein [Populus trichocarpa]
Length = 176
Score = 234 bits (597), Expect = 3e-59
Identities = 110/176 (62%), Positives = 146/176 (82%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK +L WNV+IPAE+LD LMLQ++I+ RL+ D+A K A+K+LGY+LA++T+E IGE
Sbjct: 1 MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV FS ITFKI GEIL+G+V K+LK GV L+CGP+E ++LS KM D
Sbjct: 61 GKVRQHTGDVLFPVVFSGITFKIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y+YVPGENP F+N+K+SKIEK VVVRF+V+G K++E E+ F+ + SLEG YLGPVS
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQALVSLEGDYLGPVS 176
>ref|XP_007144077.1| hypothetical protein PHAVU_007G126700g [Phaseolus vulgaris]
gi|561017267|gb|ESW16071.1| hypothetical protein
PHAVU_007G126700g [Phaseolus vulgaris]
Length = 180
Score = 231 bits (589), Expect = 2e-58
Identities = 113/176 (64%), Positives = 142/176 (80%)
Frame = -1
Query: 668 MYLKSKLSWNVVIPAESLDGGTLMLQKAIITRLMTDYAAKKASKELGYFLALTTVEKIGE 489
M+LK +L WNV+I AE+L LMLQ+ II RL+ D+A KKA+K+LGYFLA+TT+EKIGE
Sbjct: 1 MFLKVQLPWNVIIAAENLKPQGLMLQREIIIRLLGDFAMKKATKDLGYFLAVTTLEKIGE 60
Query: 488 GKVRKQSGDVIFPVSFSCITFKILPGEILEGVVDKILKPGVFLKCGPVETVFLSHQKMDD 309
GKVR+ +GDV+FPV F+ ITFKI GEILEGVV K+LK GVF++CGP+E V+LSH KM D
Sbjct: 61 GKVRQHTGDVLFPVVFNAITFKIFKGEILEGVVHKVLKHGVFMRCGPIENVYLSHLKMPD 120
Query: 308 YKYVPGENPYFMNEKSSKIEKGVVVRFLVIGEKFIEVEKVFRVVGSLEGHYLGPVS 141
Y+YVPGEN FMN+K SKI K V VRF VIG K++E ++ F+ + SLEG YLGP+S
Sbjct: 121 YRYVPGENACFMNDKLSKIGKDVTVRFSVIGTKWMEADREFQALVSLEGDYLGPIS 176