BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00014979
         (1463 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18861.1| hypothetical protein MIMGU_mgv1a007041mg [Mimulus...   718   0.0  
ref|XP_004237420.1| PREDICTED: general transcription factor IIH ...   689   0.0  
ref|XP_006363938.1| PREDICTED: general transcription factor IIH ...   685   0.0  
ref|XP_006366483.1| PREDICTED: general transcription factor IIH ...   670   0.0  
emb|CBI16283.3| unnamed protein product [Vitis vinifera]              669   0.0  
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   669   0.0  
gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus...   661   0.0  
ref|XP_007015448.1| General transcription factor II H2 isoform 1...   650   0.0  
ref|XP_007205253.1| hypothetical protein PRUPE_ppa006259mg [Prun...   645   0.0  
ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citr...   643   0.0  
ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citr...   642   0.0  
ref|XP_006491820.1| PREDICTED: general transcription factor IIH ...   640   0.0  
ref|XP_006489788.1| PREDICTED: general transcription factor IIH ...   639   0.0  
ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor ...   637   e-180
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ...   636   e-180
ref|XP_004493385.1| PREDICTED: general transcription factor IIH ...   634   e-179
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ...   627   e-177
ref|XP_003624959.1| General transcription factor IIH subunit [Me...   626   e-177
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   625   e-176
ref|XP_007162073.1| hypothetical protein PHAVU_001G121400g [Phas...   619   e-175

>gb|EYU18861.1| hypothetical protein MIMGU_mgv1a007041mg [Mimulus guttatus]
          Length = 422

 Score =  718 bits (1854), Expect = 0.0
 Identities = 343/393 (87%), Positives = 366/393 (93%)
 Frame = -1

Query: 1430 RGMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXRIQKGLIRYV 1251
            +G EAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQY          RIQKGLIRY+
Sbjct: 28   KGREAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSTTTRIQKGLIRYL 87

Query: 1250 YIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTDLG 1071
            YIVIDLSRAAGE+DYKPSRM+VVARQVEAFIREFFDQNPLSQIGL+TLKDGVAN LTDLG
Sbjct: 88   YIVIDLSRAAGETDYKPSRMVVVARQVEAFIREFFDQNPLSQIGLLTLKDGVANSLTDLG 147

Query: 1070 GSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIM 891
            GSPESHIKALMGKLTSSGDASLQNGLDLVH  LNQ+P+YGHREVLILYS+L+TCDP DIM
Sbjct: 148  GSPESHIKALMGKLTSSGDASLQNGLDLVHSHLNQMPTYGHREVLILYSSLNTCDPSDIM 207

Query: 890  ETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPPAIA 711
            ETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSY VA+DE+HLKELVFEHAPPPPAIA
Sbjct: 208  ETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYYVAVDEHHLKELVFEHAPPPPAIA 267

Query: 710  EFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGLTLV 531
            EFA+ANLI+MGFPQRAAEGVISIC CHKEAKVGGGYTCPRCKAR+C+LPTECQICGLTLV
Sbjct: 268  EFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICDLPTECQICGLTLV 327

Query: 530  SSPHLARSYHHLFPITPFDDVSPSVTSNPSKIPKNCFGCKLSLLNPGNMPAPCVSCPKCK 351
            SSPHLARSYHHLFPITPFDDV+PSV+S+P  + KNCFGC+ +LLNPGNMP   V CPKCK
Sbjct: 328  SSPHLARSYHHLFPITPFDDVAPSVSSDPRYLAKNCFGCQQTLLNPGNMPGSRVCCPKCK 387

Query: 350  QFFCLDCDIYIHESLHNCPGCESFRHSEPVGTV 252
            Q+FCLDCDIYIHESLHNCPGCESFRHS+  GTV
Sbjct: 388  QYFCLDCDIYIHESLHNCPGCESFRHSKSNGTV 420


>ref|XP_004237420.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
            lycopersicum]
          Length = 414

 Score =  689 bits (1777), Expect = 0.0
 Identities = 332/390 (85%), Positives = 351/390 (90%)
 Frame = -1

Query: 1430 RGMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXRIQKGLIRYV 1251
            RG EAWERTYADERSWESLQEDESGLLRPIDNKTL HAQY          RIQKGLIRY+
Sbjct: 20   RGREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATAARIQKGLIRYL 79

Query: 1250 YIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTDLG 1071
            YI+ID SRAA E DYKPSRM+VVARQVEA+IREFFDQNPLSQIGLV LKDGVA+CLTDLG
Sbjct: 80   YIIIDFSRAAAEMDYKPSRMVVVARQVEAYIREFFDQNPLSQIGLVILKDGVAHCLTDLG 139

Query: 1070 GSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIM 891
            GSPE+HIKALMGKL +SGDASLQNGLDLV  LLNQIPSYGHRE LILYSALSTCDPGDI+
Sbjct: 140  GSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLNQIPSYGHREALILYSALSTCDPGDIL 199

Query: 890  ETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPPAIA 711
            ETIQKCKASKIRCSVIGLSAELYICK+LCQETGG Y VALDE HLKELV EHAPPPPAIA
Sbjct: 200  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHAPPPPAIA 259

Query: 710  EFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGLTLV 531
            EFAVANLI+MGFPQR AEGVISIC CHKEAKVGGGYTCPRCKAR+CELPTEC ICGLTLV
Sbjct: 260  EFAVANLIKMGFPQRTAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 319

Query: 530  SSPHLARSYHHLFPITPFDDVSPSVTSNPSKIPKNCFGCKLSLLNPGNMPAPCVSCPKCK 351
            SSPHLARSYHHLFPI PFDDVSPS   +  K+PKNCFGC+LSLLNPGN+P P V+CP CK
Sbjct: 320  SSPHLARSYHHLFPIRPFDDVSPSALKDFHKLPKNCFGCQLSLLNPGNLPGPQVACPNCK 379

Query: 350  QFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            Q FCLDCDIYIHESLHNCPGCES R+S+ +
Sbjct: 380  QHFCLDCDIYIHESLHNCPGCESLRNSKTI 409


>ref|XP_006363938.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Solanum tuberosum]
          Length = 414

 Score =  685 bits (1767), Expect = 0.0
 Identities = 332/390 (85%), Positives = 350/390 (89%)
 Frame = -1

Query: 1430 RGMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXRIQKGLIRYV 1251
            RG EAWERTYADERSWESLQEDESGLLRPIDN TL HAQY          RIQKGLIRY+
Sbjct: 20   RGREAWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATAARIQKGLIRYL 79

Query: 1250 YIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTDLG 1071
            YI+IDLSRAA E DYKPSRM+VVARQVEAFIREFFDQNPLSQIGLV LKDGVA+CLTDLG
Sbjct: 80   YIIIDLSRAAAEMDYKPSRMVVVARQVEAFIREFFDQNPLSQIGLVILKDGVAHCLTDLG 139

Query: 1070 GSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIM 891
            GSPE+HIKALMGKL +SGDASLQNGLDLV  LLNQIPSYGHRE LILYSALSTCDPGDI+
Sbjct: 140  GSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLNQIPSYGHREALILYSALSTCDPGDIL 199

Query: 890  ETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPPAIA 711
            ETIQK KASKIRCSVIGLSAELYICK+LCQETGG Y VALDE HLKELV EHAPPPPAIA
Sbjct: 200  ETIQKYKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHAPPPPAIA 259

Query: 710  EFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGLTLV 531
            EFAVANLI+MGFPQR AEGVISIC CHKEAKVGGGYTCPRCKAR+CELPTEC ICGLTLV
Sbjct: 260  EFAVANLIKMGFPQRTAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 319

Query: 530  SSPHLARSYHHLFPITPFDDVSPSVTSNPSKIPKNCFGCKLSLLNPGNMPAPCVSCPKCK 351
            SSPHLARSYHHLFPI PFDDVSPS   +  K+PKNCFGC+LSLLNPGN+P P V+CP CK
Sbjct: 320  SSPHLARSYHHLFPIRPFDDVSPSALKDFHKLPKNCFGCQLSLLNPGNLPGPQVACPNCK 379

Query: 350  QFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            Q FCLDCDIYIHESLHNCPGCES R+S+ +
Sbjct: 380  QHFCLDCDIYIHESLHNCPGCESLRNSKTI 409


>ref|XP_006366483.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
            tuberosum]
          Length = 418

 Score =  670 bits (1728), Expect = 0.0
 Identities = 328/394 (83%), Positives = 346/394 (87%), Gaps = 4/394 (1%)
 Frame = -1

Query: 1430 RGMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXRIQKGLIRYV 1251
            RG EAWERTYADERSWESLQEDESGLLR IDNKTL HAQY          RIQKGLIRY+
Sbjct: 20   RGREAWERTYADERSWESLQEDESGLLRLIDNKTLSHAQYRRRLRTATAARIQKGLIRYL 79

Query: 1250 YIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTDLG 1071
            YI+ID SRAA E DYKPSRM+VVARQVEAFIREFFDQNPLSQIGLV LKDG A+CLTDLG
Sbjct: 80   YIIIDFSRAAAEMDYKPSRMVVVARQVEAFIREFFDQNPLSQIGLVILKDGEAHCLTDLG 139

Query: 1070 GSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIM 891
            GSPE+HIK LMGKL +SGDASLQNGLDLV  LLNQIPSYGHRE LILYSALSTCDPGDI+
Sbjct: 140  GSPEAHIKELMGKLGTSGDASLQNGLDLVCDLLNQIPSYGHREALILYSALSTCDPGDIL 199

Query: 890  ETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPPAIA 711
            ETIQK KASKIRCSVIGLSAELYICK+LCQETGG Y VALDE HLKELV EHAPPPPAIA
Sbjct: 200  ETIQKYKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHAPPPPAIA 259

Query: 710  EFAVANLIR----MGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICG 543
            EFAVANLI+    MGFPQR AEGVISIC CHKEAKVGGGYTCPRCKAR+CELPTEC ICG
Sbjct: 260  EFAVANLIQMGVTMGFPQRTAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICG 319

Query: 542  LTLVSSPHLARSYHHLFPITPFDDVSPSVTSNPSKIPKNCFGCKLSLLNPGNMPAPCVSC 363
            LTLVSSPHLARSYHHLFPI PFDDVSPS   +  K+PKNCFGC+LS LNPGN+P P V+C
Sbjct: 320  LTLVSSPHLARSYHHLFPIRPFDDVSPSTLKDFHKLPKNCFGCQLSFLNPGNLPGPQVAC 379

Query: 362  PKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            P CKQ FCLDCDIYIHESLHNCPGCES R+S+ +
Sbjct: 380  PNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTI 413


>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  669 bits (1727), Expect = 0.0
 Identities = 320/395 (81%), Positives = 350/395 (88%), Gaps = 5/395 (1%)
 Frame = -1

Query: 1430 RGMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGL 1263
            RG++AWER YADERSWESLQEDESGLLRPIDNKT+YHAQY               IQKGL
Sbjct: 95   RGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGL 154

Query: 1262 IRYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCL 1083
            IRY+YIV+DLSRAA E D+KPSRM VVA+ +EAFIREFFDQNPLSQIGLVT+KDG+A CL
Sbjct: 155  IRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCL 214

Query: 1082 TDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDP 903
            TDLGGSP+SH+KALMGKL  SGD+SLQN LDLVHG LNQIPSYGHREVLILYSALSTCDP
Sbjct: 215  TDLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDP 274

Query: 902  GDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPP 723
            GDIMETIQ+CK SKIRCSVIGLSAE++IC++LCQETGGSYSVALDE H KEL+ EHAPPP
Sbjct: 275  GDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPP 334

Query: 722  PAIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICG 543
            PAIAEFA+ANLI+MGFPQRAAEGVISIC CHKEAKVGGGYTCPRCKARVCELPTEC+ICG
Sbjct: 335  PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICG 394

Query: 542  LTLVSSPHLARSYHHLFPITPFDDVSPSVTSNP-SKIPKNCFGCKLSLLNPGNMPAPCVS 366
            LTLVSSPHLARSYHHLFPI PFD+VS S+ +NP  +  + CFGC+ SLL PGN P  CV+
Sbjct: 395  LTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVA 454

Query: 365  CPKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            CPKCKQ FCLDCDIYIHESLHNCPGCESFRHS+ V
Sbjct: 455  CPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIV 489


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
            vinifera]
          Length = 433

 Score =  669 bits (1727), Expect = 0.0
 Identities = 320/395 (81%), Positives = 350/395 (88%), Gaps = 5/395 (1%)
 Frame = -1

Query: 1430 RGMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGL 1263
            RG++AWER YADERSWESLQEDESGLLRPIDNKT+YHAQY               IQKGL
Sbjct: 34   RGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGL 93

Query: 1262 IRYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCL 1083
            IRY+YIV+DLSRAA E D+KPSRM VVA+ +EAFIREFFDQNPLSQIGLVT+KDG+A CL
Sbjct: 94   IRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCL 153

Query: 1082 TDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDP 903
            TDLGGSP+SH+KALMGKL  SGD+SLQN LDLVHG LNQIPSYGHREVLILYSALSTCDP
Sbjct: 154  TDLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDP 213

Query: 902  GDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPP 723
            GDIMETIQ+CK SKIRCSVIGLSAE++IC++LCQETGGSYSVALDE H KEL+ EHAPPP
Sbjct: 214  GDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPP 273

Query: 722  PAIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICG 543
            PAIAEFA+ANLI+MGFPQRAAEGVISIC CHKEAKVGGGYTCPRCKARVCELPTEC+ICG
Sbjct: 274  PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICG 333

Query: 542  LTLVSSPHLARSYHHLFPITPFDDVSPSVTSNP-SKIPKNCFGCKLSLLNPGNMPAPCVS 366
            LTLVSSPHLARSYHHLFPI PFD+VS S+ +NP  +  + CFGC+ SLL PGN P  CV+
Sbjct: 334  LTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVA 393

Query: 365  CPKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            CPKCKQ FCLDCDIYIHESLHNCPGCESFRHS+ V
Sbjct: 394  CPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIV 428


>gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus notabilis]
          Length = 423

 Score =  661 bits (1705), Expect = 0.0
 Identities = 313/391 (80%), Positives = 345/391 (88%), Gaps = 1/391 (0%)
 Frame = -1

Query: 1430 RGMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXRIQKGLIRYV 1251
            RG+EAWERTYADERSWESLQEDESGLLRPIDNKT YHAQY          RIQKGLIRY+
Sbjct: 28   RGLEAWERTYADERSWESLQEDESGLLRPIDNKTFYHAQYRRRLRSASAVRIQKGLIRYL 87

Query: 1250 YIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTDLG 1071
            ++VIDLS+AA E D++PSRM VVA+ VEAFIREFFDQNPLSQ+GLVT+KDGVA+CLTDLG
Sbjct: 88   FLVIDLSKAAAEMDFRPSRMAVVAKHVEAFIREFFDQNPLSQVGLVTIKDGVAHCLTDLG 147

Query: 1070 GSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIM 891
            GSPESH+K+LMGKL  SG++S+QN LDLVH  LNQIPSYGHREVLI YSALSTCDPGDIM
Sbjct: 148  GSPESHVKSLMGKLECSGESSIQNALDLVHDYLNQIPSYGHREVLIFYSALSTCDPGDIM 207

Query: 890  ETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPPAIA 711
            ETIQKCK SKIRCSVIGLSAE++ICK+LCQETGGSYSVALDE H KEL+ EHAPPPPAIA
Sbjct: 208  ETIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGSYSVALDESHFKELILEHAPPPPAIA 267

Query: 710  EFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGLTLV 531
            E+A+ANLI+MGFPQRAAE  I+IC CHKEAK GGGYTCPRCKARVCELPTECQ CGLTL+
Sbjct: 268  EYAIANLIKMGFPQRAAESSIAICSCHKEAKAGGGYTCPRCKARVCELPTECQTCGLTLI 327

Query: 530  SSPHLARSYHHLFPITPFDDVSPSVTSNP-SKIPKNCFGCKLSLLNPGNMPAPCVSCPKC 354
            SSPHLARSYHHLFPI PFD++S S+ S+P  K+ K CFGC+ SLL  GN P P VSCPKC
Sbjct: 328  SSPHLARSYHHLFPIVPFDEMSTSLLSDPHRKLSKACFGCQQSLLGFGNKPGPRVSCPKC 387

Query: 353  KQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            K  FCLDCDIYIHESLHNCPGCES RHS+PV
Sbjct: 388  KHQFCLDCDIYIHESLHNCPGCESARHSKPV 418


>ref|XP_007015448.1| General transcription factor II H2 isoform 1 [Theobroma cacao]
            gi|590585467|ref|XP_007015449.1| General transcription
            factor II H2 isoform 1 [Theobroma cacao]
            gi|590585471|ref|XP_007015450.1| General transcription
            factor II H2 isoform 1 [Theobroma cacao]
            gi|508785811|gb|EOY33067.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
            gi|508785812|gb|EOY33068.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
            gi|508785813|gb|EOY33069.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
          Length = 420

 Score =  650 bits (1678), Expect = 0.0
 Identities = 308/391 (78%), Positives = 343/391 (87%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1424 MEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLIR 1257
            ++AWERTY DERSWESLQEDESGLLRPIDNK LYH+QY               IQKGLIR
Sbjct: 26   LDAWERTYTDERSWESLQEDESGLLRPIDNKALYHSQYRRRLRSLSSTATAARIQKGLIR 85

Query: 1256 YVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTD 1077
            Y+Y+VIDLSRAA E+D++PSR++V+A+ VEAFIREFFDQNPLSQ+GL+T+KDGVA CLTD
Sbjct: 86   YLYLVIDLSRAASETDFRPSRIVVIAKHVEAFIREFFDQNPLSQVGLLTIKDGVAQCLTD 145

Query: 1076 LGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPGD 897
            LGGSPESHIKALM KL  SGD+SLQN LDLV G LNQIPSYGHREVLILY+ALSTCDPGD
Sbjct: 146  LGGSPESHIKALMNKLECSGDSSLQNALDLVDGYLNQIPSYGHREVLILYAALSTCDPGD 205

Query: 896  IMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPPA 717
            IMETIQKCK SKIRCSVIGL+AE++ICK+LCQETGG+YSVALDE H KEL+ EHAPPPPA
Sbjct: 206  IMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPA 265

Query: 716  IAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGLT 537
            IAEFA ANLI+MGFPQRAAEG ISIC CHKEAKVG GYTCPRCKARVCELPTEC+ICGLT
Sbjct: 266  IAEFATANLIKMGFPQRAAEGSISICSCHKEAKVGAGYTCPRCKARVCELPTECRICGLT 325

Query: 536  LVSSPHLARSYHHLFPITPFDDVSPSVTSNPS-KIPKNCFGCKLSLLNPGNMPAPCVSCP 360
            LVSSPHLARSYHHLFPI PFD+V P   ++P+ K+ +NCFGC+ SLLNPGN P   V CP
Sbjct: 326  LVSSPHLARSYHHLFPIAPFDEVPPFSLNDPNHKLQRNCFGCQQSLLNPGNKPGLLVVCP 385

Query: 359  KCKQFFCLDCDIYIHESLHNCPGCESFRHSE 267
            KCK +FCLDCDIYIHESLHNCPGC+SFRHS+
Sbjct: 386  KCKGYFCLDCDIYIHESLHNCPGCDSFRHSK 416


>ref|XP_007205253.1| hypothetical protein PRUPE_ppa006259mg [Prunus persica]
            gi|462400895|gb|EMJ06452.1| hypothetical protein
            PRUPE_ppa006259mg [Prunus persica]
          Length = 420

 Score =  645 bits (1665), Expect = 0.0
 Identities = 307/388 (79%), Positives = 341/388 (87%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXRIQKGLIRYVY 1248
            G+ AWER YADERSWESLQEDESGLL+PIDN++L HAQY          RIQKGLIRYVY
Sbjct: 26   GLAAWERAYADERSWESLQEDESGLLQPIDNQSLKHAQYRRRLRAASTARIQKGLIRYVY 85

Query: 1247 IVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTDLGG 1068
            IVIDLS+AA E D++PSRM VVA+ VEAFI EFF QNPLSQ+GLVT+KDGVA+CLTDLGG
Sbjct: 86   IVIDLSKAAAEMDFRPSRMGVVAKHVEAFIIEFFYQNPLSQVGLVTIKDGVAHCLTDLGG 145

Query: 1067 SPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIME 888
            SP SH+KALMGKL  SGD+SLQN LDLVHG L QIPSYGHREVLILYSALSTCDPGDIME
Sbjct: 146  SPNSHVKALMGKLECSGDSSLQNALDLVHGYLEQIPSYGHREVLILYSALSTCDPGDIME 205

Query: 887  TIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPPAIAE 708
            TIQKCK SKIRCSVIGLSAE++ICK+LCQETGG Y +ALDE HLKEL+ EHAPPPPAIAE
Sbjct: 206  TIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGLYYIALDEPHLKELILEHAPPPPAIAE 265

Query: 707  FAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGLTLVS 528
            FA+ANLI+MGFPQRAAEG ++IC CHKEAKVGGGYTCPRCKARVC+LPTEC+ICGLTL+S
Sbjct: 266  FAIANLIKMGFPQRAAEGSVAICSCHKEAKVGGGYTCPRCKARVCDLPTECRICGLTLIS 325

Query: 527  SPHLARSYHHLFPITPFDDVSPS-VTSNPSKIPKNCFGCKLSLLNPGNMPAPCVSCPKCK 351
            SPHLARSYHHLFPI PFD+VSPS +    +K P+ CFGC+ SLLNPGN P+  V+CPKCK
Sbjct: 326  SPHLARSYHHLFPIVPFDEVSPSLLIDQQNKFPRACFGCQQSLLNPGNKPSLRVACPKCK 385

Query: 350  QFFCLDCDIYIHESLHNCPGCESFRHSE 267
            Q FCLDCDIYIH+SLHNCPGCES  HS+
Sbjct: 386  QHFCLDCDIYIHDSLHNCPGCESASHSK 413


>ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citrus clementina]
            gi|567871805|ref|XP_006428492.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
            gi|557530547|gb|ESR41730.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
            gi|557530549|gb|ESR41732.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
          Length = 425

 Score =  643 bits (1658), Expect = 0.0
 Identities = 305/394 (77%), Positives = 339/394 (86%), Gaps = 5/394 (1%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLI 1260
            G+EAWER+YAD+RSWE+LQEDESG LRPIDN   YHAQY               IQKGLI
Sbjct: 27   GLEAWERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLI 86

Query: 1259 RYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1080
            RY+YIVIDLSRAA E D++PSRM VVA++VEAF+REFFDQNPLSQIGLVT+KDGVANCLT
Sbjct: 87   RYLYIVIDLSRAAAEMDFRPSRMAVVAKRVEAFVREFFDQNPLSQIGLVTVKDGVANCLT 146

Query: 1079 DLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPG 900
            DLGGSPE+HIK LMGKL  SGD+SLQN LDLV GLL+QIPSYGHREVLILYSALSTCDPG
Sbjct: 147  DLGGSPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG 206

Query: 899  DIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPP 720
            DIMETIQKCK SKIRCSVIGLSAE++ICK+LCQ+TGGSYSVALDE H KEL+ EHAPPPP
Sbjct: 207  DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELIMEHAPPPP 266

Query: 719  AIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGL 540
            AIAEFA+ANLI+MGFPQRA EG ISIC CHKE KVG GYTCPRCKARVCELPT+C ICGL
Sbjct: 267  AIAEFAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTDCHICGL 326

Query: 539  TLVSSPHLARSYHHLFPITPFDDVSPSVTSNP-SKIPKNCFGCKLSLLNPGNMPAPCVSC 363
             LVSSPHLARSYHHLFPI PFD+V+P   ++P ++    CFGC+ SLL+ GN P  CV+C
Sbjct: 327  QLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLCVAC 386

Query: 362  PKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            PKCK+ FCL+CDIYIHESLHNCPGCES RHS P+
Sbjct: 387  PKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 420


>ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citrus clementina]
            gi|557522488|gb|ESR33855.1| hypothetical protein
            CICLE_v10005033mg [Citrus clementina]
          Length = 424

 Score =  642 bits (1656), Expect = 0.0
 Identities = 307/394 (77%), Positives = 340/394 (86%), Gaps = 5/394 (1%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLI 1260
            G+EAWER+YAD+RSWE+LQEDESG LRPIDN  +YHAQY               IQKGLI
Sbjct: 26   GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTVATARIQKGLI 85

Query: 1259 RYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1080
            RY+YIVIDLSRAA E D++PSRM+VVA+QVEAF+REFFDQNPLSQIGLVT+KDGVANCLT
Sbjct: 86   RYLYIVIDLSRAAAEMDFRPSRMVVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT 145

Query: 1079 DLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPG 900
            DLGGSPESHIKALMGKL  SGD+S+QN LDLVHGLLNQIPSYGHREVLILYSALSTCDPG
Sbjct: 146  DLGGSPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPG 205

Query: 899  DIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPP 720
            DIMETIQKCK SKIRCSVIGLSAE++ICK+LCQETGG+YSVALDE H KEL+ EHAPPPP
Sbjct: 206  DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPP 265

Query: 719  AIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGL 540
            AIAEFA+A+LI+MGFPQRA EG ISIC CHKE K+G GYTCPRCKARVCELPTEC ICGL
Sbjct: 266  AIAEFAIASLIKMGFPQRAGEGSISICSCHKEVKIGVGYTCPRCKARVCELPTECCICGL 325

Query: 539  TLVSSPHLARSYHHLFPITPFDDVSPSVTSNPSKIPKN-CFGCKLSLLNPGNMPAPCVSC 363
             LVSSPHLARSYHHLFPI PFD+ +PS  ++   I ++ CFGC+ SLL  GN    CV+C
Sbjct: 326  QLVSSPHLARSYHHLFPIAPFDEATPSRLNDLHNISRSTCFGCQQSLLASGNKAGLCVAC 385

Query: 362  PKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            PKCK+ FCL+CDIYIHESLHNCPGCES R S PV
Sbjct: 386  PKCKKHFCLECDIYIHESLHNCPGCESLRQSNPV 419


>ref|XP_006491820.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Citrus sinensis] gi|568877611|ref|XP_006491821.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X2 [Citrus sinensis]
            gi|568877613|ref|XP_006491822.1| PREDICTED: general
            transcription factor IIH subunit 2-like isoform X3
            [Citrus sinensis] gi|568877615|ref|XP_006491823.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X4 [Citrus sinensis]
          Length = 425

 Score =  640 bits (1651), Expect = 0.0
 Identities = 305/394 (77%), Positives = 338/394 (85%), Gaps = 5/394 (1%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLI 1260
            G+EAWER+YAD+RSWE+LQEDESG LRPIDN   YHAQY               IQKGLI
Sbjct: 27   GLEAWERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLI 86

Query: 1259 RYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1080
            RY+YIVIDLSRAA E D++PSRM VVA+QVEAF+REFFDQNPLSQIGLVT+KDGVANCLT
Sbjct: 87   RYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT 146

Query: 1079 DLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPG 900
            DLGGSPE+HIK LMGKL  SGD+SLQN LDLV GLL+QIPSYGHREVLILYSALSTCDPG
Sbjct: 147  DLGGSPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG 206

Query: 899  DIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPP 720
            DIMETIQKCK SKIRCSVIGLSAE++ICK+LCQ+TGGSYSVALDE H KEL+ EHAPPPP
Sbjct: 207  DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELIMEHAPPPP 266

Query: 719  AIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGL 540
            AIAEFA+ANLI+MGFPQRA EG ISIC CHKE KVG GYTCPRCKARVCELPT+C ICGL
Sbjct: 267  AIAEFAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTDCHICGL 326

Query: 539  TLVSSPHLARSYHHLFPITPFDDVSPSVTSNP-SKIPKNCFGCKLSLLNPGNMPAPCVSC 363
             LVSSPHLARSYHHLFPI PFD+V+P   ++P ++    CFGC+ SLL+ GN P   V+C
Sbjct: 327  QLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVAC 386

Query: 362  PKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            PKCK+ FCL+CDIYIHESLHNCPGCES RHS P+
Sbjct: 387  PKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 420


>ref|XP_006489788.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Citrus sinensis]
          Length = 424

 Score =  639 bits (1648), Expect = 0.0
 Identities = 307/394 (77%), Positives = 339/394 (86%), Gaps = 5/394 (1%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLI 1260
            G+EAWER+YAD+RSWE+LQEDESG LRPIDN  +YHAQY               IQKGLI
Sbjct: 26   GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTAATARIQKGLI 85

Query: 1259 RYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1080
            RY+YIVIDLSRAA E D++PSRM VVA+QVEAF+REFF QNPLSQIGLVT+KDGVANCLT
Sbjct: 86   RYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFYQNPLSQIGLVTVKDGVANCLT 145

Query: 1079 DLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPG 900
            DLGGSPESHIKALMGKL  SGD+S+QN LDLVHGLLNQIPSYGHREVLILYSALSTCDPG
Sbjct: 146  DLGGSPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPG 205

Query: 899  DIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPP 720
            DIMETIQKCK SKIRCSVIGLSAE++ICK+LCQETGG+YSVALDE H KEL+ EHAPPPP
Sbjct: 206  DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGTYSVALDESHSKELILEHAPPPP 265

Query: 719  AIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGL 540
            AIAEFA+A+LI+MGFPQRA EG ISIC CHKE KVG GYTCPRCKARVCELPTEC+ICGL
Sbjct: 266  AIAEFAIASLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTECRICGL 325

Query: 539  TLVSSPHLARSYHHLFPITPFDDVSPSVTSNPSKIPKN-CFGCKLSLLNPGNMPAPCVSC 363
             LVSSPHLARSYHHLFPI PFD+ +PS  ++   I ++ CFGC+ SLL  GN    CV+C
Sbjct: 326  QLVSSPHLARSYHHLFPIAPFDEATPSRLNDLHNISRSTCFGCQQSLLASGNKAGLCVAC 385

Query: 362  PKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            PKCK+ FCL+CDIYIHESLHNCPGCES R S PV
Sbjct: 386  PKCKKHFCLECDIYIHESLHNCPGCESLRQSNPV 419


>ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor complex p47 subunit-like
            [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  637 bits (1644), Expect = e-180
 Identities = 303/388 (78%), Positives = 342/388 (88%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXRIQKGLIRYVY 1248
            G+ AWER YADERSWESLQEDESGLLRPIDN++L+HAQY          RIQKGLIRY+Y
Sbjct: 25   GLAAWERAYADERSWESLQEDESGLLRPIDNQSLHHAQYRRRLRAATTARIQKGLIRYLY 84

Query: 1247 IVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTDLGG 1068
            IVIDLS+AA E D++PSRM VVA+ VEAFIRE+F QNPLSQ+GLVT+KDGV++ LTDLGG
Sbjct: 85   IVIDLSKAASEMDFRPSRMGVVAKHVEAFIREYFYQNPLSQVGLVTIKDGVSHILTDLGG 144

Query: 1067 SPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIME 888
            SPESH+KALMGKL  SGDASLQN LDLV G L+QIPSYGHREVLI+YSALSTCDPGDIM 
Sbjct: 145  SPESHVKALMGKLECSGDASLQNALDLVQGYLDQIPSYGHREVLIMYSALSTCDPGDIMG 204

Query: 887  TIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPPAIAE 708
            TIQKCK SKIRCSVIGLSAE++ICK+LCQETGGSY +ALDE HLK+L+ EHAPPPPAIAE
Sbjct: 205  TIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGSYYIALDESHLKDLILEHAPPPPAIAE 264

Query: 707  FAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGLTLVS 528
            FA+ANLI+MGFPQRAAE  ++IC CHKEAKVG GYTCPRCKARVCELPTEC+ICGLTL+S
Sbjct: 265  FAIANLIKMGFPQRAAESSVAICSCHKEAKVGDGYTCPRCKARVCELPTECRICGLTLIS 324

Query: 527  SPHLARSYHHLFPITPFDDVSPSVTSN-PSKIPKNCFGCKLSLLNPGNMPAPCVSCPKCK 351
            SPHLARSYHHLFPI PFD+VS S+ S+  +K+PK CFGC+ S+L PGN P   V+CPKCK
Sbjct: 325  SPHLARSYHHLFPIVPFDEVSMSLYSDQQNKLPKACFGCQQSVLGPGNKPGLRVACPKCK 384

Query: 350  QFFCLDCDIYIHESLHNCPGCESFRHSE 267
            Q FCLDCDIYIHESLHNCPGC+S RHS+
Sbjct: 385  QHFCLDCDIYIHESLHNCPGCDSTRHSK 412


>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
            sativus]
          Length = 423

 Score =  636 bits (1641), Expect = e-180
 Identities = 303/391 (77%), Positives = 340/391 (86%), Gaps = 7/391 (1%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLI 1260
            G+ AWERTYAD+RSWE+LQEDESGLLRPIDNK +YHAQY               IQKGLI
Sbjct: 24   GLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTARIQKGLI 83

Query: 1259 RYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1080
            RY+YIVID S+AA E D++PSRM VVA+ V+AF+REFFDQNPLSQIGLVT+KDG ANCLT
Sbjct: 84   RYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAFVREFFDQNPLSQIGLVTIKDGFANCLT 143

Query: 1079 DLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPG 900
            DLGGSPESH+KALMGKL  SGDASLQNGL+LVH  LNQIPSYGHREVL+LYSAL++CDPG
Sbjct: 144  DLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSALNSCDPG 203

Query: 899  DIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPP 720
            DIMET+QKCK SKIRCSVIGL+AE++IC++LCQETGGSYSVALDE H KEL+ EHAPPPP
Sbjct: 204  DIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPP 263

Query: 719  AIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGL 540
            AIA+ A+ NLI+MGFPQRAAE  I+IC CHKEAKVGGGYTCPRCKARVCELPTEC+ICGL
Sbjct: 264  AIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICGL 323

Query: 539  TLVSSPHLARSYHHLFPITPFDDVSPSVTSNP-SKIPKNCFGCKLSLLNP--GNMPAPCV 369
            TL+SSPHLARSYHHLFPI PFD+VS  V  +P  ++PK CFGC+ SL+NP  GN P+  V
Sbjct: 324  TLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFGCQESLMNPSTGNSPSIRV 383

Query: 368  SCPKCKQFFCLDCDIYIHESLHNCPGCESFR 276
            SCPKCKQ FCLDCDIYIHESLHNCPGCESFR
Sbjct: 384  SCPKCKQHFCLDCDIYIHESLHNCPGCESFR 414


>ref|XP_004493385.1| PREDICTED: general transcription factor IIH subunit 2-like [Cicer
            arietinum]
          Length = 422

 Score =  634 bits (1634), Expect = e-179
 Identities = 302/394 (76%), Positives = 336/394 (85%), Gaps = 5/394 (1%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLI 1260
            G+EAWER Y ++RSWESLQEDESGLLRPID   ++HAQY               IQKGLI
Sbjct: 26   GLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALAATAATARIQKGLI 85

Query: 1259 RYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1080
            RY+YIV+DLS+AA E D++PSRM V+A+QVEAFIREFFDQNPLS +GLVT KDGVA  LT
Sbjct: 86   RYMYIVVDLSKAASERDFRPSRMAVIAKQVEAFIREFFDQNPLSHVGLVTTKDGVAQSLT 145

Query: 1079 DLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPG 900
            DLGGSPESHIKALMGKL  SGDASLQN LDLVH  LNQIPSYGHREVLILYSALSTCDPG
Sbjct: 146  DLGGSPESHIKALMGKLECSGDASLQNALDLVHDNLNQIPSYGHREVLILYSALSTCDPG 205

Query: 899  DIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPP 720
            D+METIQKCK SKIRCSVIGL+AE++ICK+LCQETGG+YSVALDE H KEL+ EHAPPPP
Sbjct: 206  DLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPP 265

Query: 719  AIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGL 540
            AIAE+A ANLI+MGFPQRAAEG ++IC CH+EAK GGGYTCPRCK RVCELPTEC+ICGL
Sbjct: 266  AIAEYATANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRICGL 325

Query: 539  TLVSSPHLARSYHHLFPITPFDDVSPSVTSNPS-KIPKNCFGCKLSLLNPGNMPAPCVSC 363
            TL+SSPHLARSYHHLFPI PF ++SPS  ++PS   P  CFGC+ SLL+ GN P   VSC
Sbjct: 326  TLISSPHLARSYHHLFPIVPFVEISPSSQNDPSHNFPNICFGCQESLLSHGNKPELSVSC 385

Query: 362  PKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            PKCKQ FCLDCDIYIHESLHNCPGCESFRHS+ V
Sbjct: 386  PKCKQQFCLDCDIYIHESLHNCPGCESFRHSKSV 419


>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Glycine max] gi|571487648|ref|XP_006590708.1| PREDICTED:
            general transcription factor IIH subunit 2-like isoform
            X2 [Glycine max] gi|571487650|ref|XP_006590709.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X3 [Glycine max]
            gi|571487652|ref|XP_006590710.1| PREDICTED: general
            transcription factor IIH subunit 2-like isoform X4
            [Glycine max] gi|571487654|ref|XP_006590711.1| PREDICTED:
            general transcription factor IIH subunit 2-like isoform
            X5 [Glycine max]
          Length = 419

 Score =  627 bits (1618), Expect = e-177
 Identities = 290/393 (73%), Positives = 336/393 (85%), Gaps = 4/393 (1%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLI 1260
            G+EAWERTYA++RSWE+LQEDESGLLRPID   +YHAQY               IQKGLI
Sbjct: 23   GLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLI 82

Query: 1259 RYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1080
            RY+YIV+DLS+AA E D++PSRM+V+ +QVEAFIREFFDQNPLS +GLVT+KDG+A+C+T
Sbjct: 83   RYLYIVVDLSKAASERDFRPSRMVVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCIT 142

Query: 1079 DLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPG 900
            +LGGSPESHIKALMGKL  SGDASLQN L+LV G LNQIPSYGHREVLILYSALSTCDPG
Sbjct: 143  ELGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPG 202

Query: 899  DIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPP 720
            D+METIQKCK SKIRCSVIGL+AE+++CK+LC+ETGG+YSVALDE H KEL+ EHAPPPP
Sbjct: 203  DLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCEETGGTYSVALDESHFKELILEHAPPPP 262

Query: 719  AIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGL 540
            AIAE++ ANLI+MGFPQR+AEG ++IC CH+EAK GGGYTCPRCK RVCELPTEC++CGL
Sbjct: 263  AIAEYSTANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGL 322

Query: 539  TLVSSPHLARSYHHLFPITPFDDVSPSVTSNPSKIPKNCFGCKLSLLNPGNMPAPCVSCP 360
            TL+SSPHLARSYHHLFPI  FD+V+PS   +    P  CFGC+ SLL+ GN P   V CP
Sbjct: 323  TLISSPHLARSYHHLFPIVMFDEVTPSQKDSSRSFPNTCFGCQQSLLSQGNKPGLSVICP 382

Query: 359  KCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            KCKQ FCLDCDIY+HESLHNCPGCES RHS+ V
Sbjct: 383  KCKQQFCLDCDIYVHESLHNCPGCESSRHSKSV 415


>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355499974|gb|AES81177.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 426

 Score =  626 bits (1615), Expect = e-177
 Identities = 297/398 (74%), Positives = 336/398 (84%), Gaps = 9/398 (2%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLI 1260
            G+EAWER Y ++RSWESLQEDESGLLRPID   ++HAQY               IQKGLI
Sbjct: 25   GLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALASNAATARIQKGLI 84

Query: 1259 RYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1080
            RY+YIV+DLS+AA E D++PSRM V+A+QVE FIREFFDQNPLS +GLVT KDGVANCLT
Sbjct: 85   RYLYIVVDLSKAASERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDGVANCLT 144

Query: 1079 DLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPG 900
            DLGGSPESHIKALMGKL  SGDASLQN L+LVH  LNQIPSYGHREVLILYSALSTCDPG
Sbjct: 145  DLGGSPESHIKALMGKLECSGDASLQNALELVHSNLNQIPSYGHREVLILYSALSTCDPG 204

Query: 899  DIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPP 720
            D+METIQKCK SKIRCSVIGL+AE++ICK+LCQETGG+YSVALDE H KEL+ EH+PPPP
Sbjct: 205  DLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHSPPPP 264

Query: 719  AIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGL 540
            AIAE+A ANLI+MGFPQRAAEG ++IC CH+EAK GGGYTCPRCK RVCELPTEC++CGL
Sbjct: 265  AIAEYATANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGL 324

Query: 539  TLVSSPHLARSYHHLFPITPFDDVSPSVTSNPS-KIPKNCFGCKLSLLN----PGNMPAP 375
            TL+SSPHLARSYHHLFPI PF ++SPS  ++P+   P  CFGC+ SLL+     GN    
Sbjct: 325  TLISSPHLARSYHHLFPIVPFAEISPSSQNDPNHSFPNTCFGCQQSLLSQGFGAGNKAEL 384

Query: 374  CVSCPKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
             VSCPKCKQ FCLDCD+YIHESLHNCPGCESFRHS+ V
Sbjct: 385  SVSCPKCKQQFCLDCDMYIHESLHNCPGCESFRHSKSV 422


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2 [Glycine max]
          Length = 420

 Score =  625 bits (1613), Expect = e-176
 Identities = 292/394 (74%), Positives = 337/394 (85%), Gaps = 5/394 (1%)
 Frame = -1

Query: 1427 GMEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLI 1260
            G+EAWERTYA++RSWE+LQEDESGLLRPID   +YHAQY               IQKGLI
Sbjct: 23   GLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLI 82

Query: 1259 RYVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1080
            RY+YIV+DLS+AA E D++PSRM V+ +QVEAFIREFFDQNPLS +GLVT+KDG+A+C+T
Sbjct: 83   RYLYIVVDLSKAASERDFRPSRMAVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCIT 142

Query: 1079 DLGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPG 900
            +LGGSPESHIKALMGKL  SGDASLQN L+LV G LNQIPSYGHREVLILYSALSTCDPG
Sbjct: 143  ELGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPG 202

Query: 899  DIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPP 720
            D+METIQKCK SKIRCSVIGL+AE+++CK+LCQETGG+YSVALDE H KEL+ EHAPPPP
Sbjct: 203  DLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPPPP 262

Query: 719  AIAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGL 540
            AIAE+A ANLI+MGFPQR+AEG ++IC CH+EAK GGGYTCPRCK RVCELPTEC++CGL
Sbjct: 263  AIAEYATANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGL 322

Query: 539  TLVSSPHLARSYHHLFPITPFDDVSPSVTSNPS-KIPKNCFGCKLSLLNPGNMPAPCVSC 363
            TL+SSPHLARSYHHLFPI  FD+V+PS  ++ +   P  CFGC+ SLL+ GN P   V C
Sbjct: 323  TLISSPHLARSYHHLFPIVMFDEVTPSSQNDSNHSFPNTCFGCQQSLLSQGNKPGLSVIC 382

Query: 362  PKCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            PKCKQ FCLDCDIY+HESLHNCPGCES RHS+ V
Sbjct: 383  PKCKQQFCLDCDIYVHESLHNCPGCESSRHSKSV 416


>ref|XP_007162073.1| hypothetical protein PHAVU_001G121400g [Phaseolus vulgaris]
            gi|561035537|gb|ESW34067.1| hypothetical protein
            PHAVU_001G121400g [Phaseolus vulgaris]
          Length = 420

 Score =  619 bits (1597), Expect = e-175
 Identities = 291/393 (74%), Positives = 332/393 (84%), Gaps = 5/393 (1%)
 Frame = -1

Query: 1424 MEAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYXXXXXXXXXXR----IQKGLIR 1257
            +EAWERTYA++RSWE+LQEDESGLLRPID   +YHAQY               IQKGLIR
Sbjct: 24   LEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIR 83

Query: 1256 YVYIVIDLSRAAGESDYKPSRMLVVARQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTD 1077
            Y+YIV+DLS+AA E D++PSRM V+ +QVE FIREFFDQNPLS +GLVT+KDG+ANC+T+
Sbjct: 84   YLYIVVDLSKAASERDFRPSRMAVIGKQVEVFIREFFDQNPLSHVGLVTIKDGIANCITE 143

Query: 1076 LGGSPESHIKALMGKLTSSGDASLQNGLDLVHGLLNQIPSYGHREVLILYSALSTCDPGD 897
            LGGSPESHI A+MGKL  SGDASLQN L+LV G LNQIPSYGHRE LILYSALSTCDPGD
Sbjct: 144  LGGSPESHINAMMGKLECSGDASLQNALELVLGCLNQIPSYGHREALILYSALSTCDPGD 203

Query: 896  IMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGSYSVALDEYHLKELVFEHAPPPPA 717
            +METIQKCK SKIRCSVIGL+AE+++CK+LCQETGG+YSVALDE H KEL+ EHAPPPPA
Sbjct: 204  LMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPPPPA 263

Query: 716  IAEFAVANLIRMGFPQRAAEGVISICCCHKEAKVGGGYTCPRCKARVCELPTECQICGLT 537
            IAE+A ANLI+MGFPQR+AEG ++IC CH+EAK GGGYTCPRCK RVCELPTEC+ICGLT
Sbjct: 264  IAEYATANLIKMGFPQRSAEGSVAICTCHEEAKAGGGYTCPRCKVRVCELPTECRICGLT 323

Query: 536  LVSSPHLARSYHHLFPITPFDDVSPSVTSNPSKIPKN-CFGCKLSLLNPGNMPAPCVSCP 360
            L+SSPHLARSYHHLFPI  FD+VSPS  ++ S+   N CFGC+ SL   GN P   V CP
Sbjct: 324  LISSPHLARSYHHLFPIVMFDEVSPSSQNDSSRSFSNTCFGCQQSLFTQGNKPGLSVICP 383

Query: 359  KCKQFFCLDCDIYIHESLHNCPGCESFRHSEPV 261
            KCKQ FCLDCDIYIHESLHNCPGCES RHS+ V
Sbjct: 384  KCKQQFCLDCDIYIHESLHNCPGCESSRHSKSV 416