BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00014928
         (1744 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU34118.1| hypothetical protein MIMGU_mgv1a003395mg [Mimulus...   866   0.0  
gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]     856   0.0  
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi...   847   0.0  
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi...   843   0.0  
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   839   0.0  
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   839   0.0  
dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]           839   0.0  
ref|XP_007215021.1| hypothetical protein PRUPE_ppa003340mg [Prun...   837   0.0  
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...   836   0.0  
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps...   835   0.0  
ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutr...   832   0.0  
ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfam...   830   0.0  
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...   827   0.0  
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr...   827   0.0  
ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containi...   825   0.0  
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...   823   0.0  
ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Popu...   822   0.0  
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi...   816   0.0  
ref|XP_007163838.1| hypothetical protein PHAVU_001G268500g [Phas...   801   0.0  
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi...   800   0.0  

>gb|EYU34118.1| hypothetical protein MIMGU_mgv1a003395mg [Mimulus guttatus]
          Length = 588

 Score =  866 bits (2238), Expect = 0.0
 Identities = 431/513 (84%), Positives = 468/513 (91%)
 Frame = +2

Query: 2    LRSTTLYANTDGEYNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEG 181
            +    LY  +   YNVVLRNVLRAKQWE+AHGLFDEMR+RALSPDRYTYS LIT FGKEG
Sbjct: 74   INEEALYTPSVFAYNVVLRNVLRAKQWEIAHGLFDEMRQRALSPDRYTYSTLITHFGKEG 133

Query: 182  LFNDALSWLQKMDHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYN 361
            LF+DALSWLQKM+HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK+SGITPDLVAYN
Sbjct: 134  LFDDALSWLQKMEHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYN 193

Query: 362  SMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRET 541
            SMINV+GKAKLFREARSLI EMR A V PDTVSY+TLLTMYVEN +F EALS+F+EMR+ 
Sbjct: 194  SMINVFGKAKLFREARSLISEMRNAGVTPDTVSYTTLLTMYVENQRFPEALSVFSEMRDV 253

Query: 542  NCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEA 721
            NC LDLT+CNIMIDVYG LDMAK+ADKLFW MRKLGIEPNVVSYNTLLRVYGDAELFGEA
Sbjct: 254  NCLLDLTTCNIMIDVYGHLDMAKEADKLFWGMRKLGIEPNVVSYNTLLRVYGDAELFGEA 313

Query: 722  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISI 901
            IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEM SR IEPNAITYSTIISI
Sbjct: 314  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMHSRNIEPNAITYSTIISI 373

Query: 902  WGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR 1081
            WGKVGKLDRAAMLFQKLRS+GIEIDQVLYQTMIVAYERAGL+ HAKRLLHEL+RPDNIPR
Sbjct: 374  WGKVGKLDRAAMLFQKLRSAGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 433

Query: 1082 ETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRK 1261
             TAI ILAGAGRIEEATWVFRQA + GEIK+I VFE MI+LFSK++KYANVIEVFERMR 
Sbjct: 434  ATAIRILAGAGRIEEATWVFRQAVDAGEIKDIKVFEHMIHLFSKYRKYANVIEVFERMRA 493

Query: 1262 VGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEK 1441
            +G+FPDS VIALVLN Y K+QEF+KA+  YTE+Q+EGCVF D VHFQM+S+ G RR+FE 
Sbjct: 494  IGYFPDSNVIALVLNGYGKLQEFEKADCAYTELQEEGCVFSDEVHFQMLSLCGARRDFET 553

Query: 1442 VEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRL 1540
            VE +FE+L  DPNVNKKDLHLVV GIY+RANR+
Sbjct: 554  VERLFERLEMDPNVNKKDLHLVVDGIYERANRV 586



 Score =  101 bits (252), Expect = 9e-19
 Identities = 78/335 (23%), Positives = 154/335 (45%), Gaps = 5/335 (1%)
 Frame = +2

Query: 593  QLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVV 772
            + D  +    L W   +    P+V +YN +LR    A+ +  A  LF  M+++ +  +  
Sbjct: 61   EADWQRSLALLDWINEEALYTPSVFAYNVVLRNVLRAKQWEIAHGLFDEMRQRALSPDRY 120

Query: 773  TYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL 952
            TY+T+I  +GK    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L
Sbjct: 121  TYSTLITHFGKEGLFDDALSWLQKMEHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 180

Query: 953  RSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRR----PDNIPRETAIHILAGAGRI 1120
            + SGI  D V Y +MI  + +A L   A+ L+ E+R     PD +   T + +     R 
Sbjct: 181  KRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRNAGVTPDTVSYTTLLTMYVENQRF 240

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
             EA  VF +  +   + ++     MI+++          ++F  MRK+G  P+      +
Sbjct: 241  PEALSVFSEMRDVNCLLDLTTCNIMIDVYGHLDMAKEADKLFWGMRKLGIEPNVVSYNTL 300

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            L  Y   + F +A  ++  MQ +        +  MI +YG   E EK   + ++ +   N
Sbjct: 301  LRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQE-MHSRN 359

Query: 1481 VNKKDL-HLVVAGIYDRANRLNDASRIINQMSDRG 1582
            +    + +  +  I+ +  +L+ A+ +  ++   G
Sbjct: 360  IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSAG 394


>gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]
          Length = 688

 Score =  856 bits (2212), Expect = 0.0
 Identities = 424/529 (80%), Positives = 479/529 (90%)
 Frame = +2

Query: 2    LRSTTLYANTDGEYNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEG 181
            +    LY  +   YNV LRNVLRAKQW+VAHGLFDEMR+RAL+PDRYTYS LIT FGKEG
Sbjct: 156  INEQALYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTYSTLITYFGKEG 215

Query: 182  LFNDALSWLQKMDHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYN 361
            +F+ ALSWLQKM+ DRV GDLVLYSNLIELSRKLCDYSKAISIFSRLK SGITPDLVAYN
Sbjct: 216  MFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKWSGITPDLVAYN 275

Query: 362  SMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRET 541
            SMINV+GKAKLFREAR LI EMR A V+PDTVSYSTLLTMYVEN KF+EALS+F+EM E 
Sbjct: 276  SMINVFGKAKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSVFSEMNEV 335

Query: 542  NCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEA 721
             C LDLT+CNIMIDVYGQLDMAK+AD+LFWSMRK+GIEPNVVSYNTLLRVYG+AELFGEA
Sbjct: 336  RCRLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEA 395

Query: 722  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISI 901
            IHLFRLMQRKDIEQNVVTYNTMI IYGK++EHEKA NL+QEMQ RGIEPNAITYSTIISI
Sbjct: 396  IHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISI 455

Query: 902  WGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR 1081
            WGK GKLDRAA+LFQKLRSSG+EIDQVLYQTMIVAYE+AGL+ HAKRLLHEL+RPDNIPR
Sbjct: 456  WGKAGKLDRAAILFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPR 515

Query: 1082 ETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRK 1261
            ETAI ILAGAGR+EEATWVFRQA++ GEIK+I+VF  MI LFSK+KKYAN+ EVF++MR 
Sbjct: 516  ETAITILAGAGRLEEATWVFRQASDAGEIKDISVFSCMIELFSKNKKYANLTEVFDKMRG 575

Query: 1262 VGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEK 1441
            VG+FPDS VIALVLNAY K+++F+KA+ VY EMQ+EGCVF D VHFQMIS+YG R++F+ 
Sbjct: 576  VGYFPDSNVIALVLNAYGKLRDFEKADAVYKEMQEEGCVFSDEVHFQMISLYGARKDFKM 635

Query: 1442 VEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            VE +FE+L  DPN+N K+LHLVVAGIY+RAN+LNDASRI+N+M+DRG L
Sbjct: 636  VEELFERLESDPNIN-KELHLVVAGIYERANKLNDASRIMNRMNDRGIL 683



 Score = 99.0 bits (245), Expect = 6e-18
 Identities = 78/334 (23%), Positives = 152/334 (45%), Gaps = 4/334 (1%)
 Frame = +2

Query: 593  QLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVV 772
            + D  +    L W   +    P+V +YN  LR    A+ +  A  LF  M+++ +  +  
Sbjct: 143  ETDWQRSLAILDWINEQALYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRY 202

Query: 773  TYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL 952
            TY+T+I  +GK    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L
Sbjct: 203  TYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRL 262

Query: 953  RSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRR----PDNIPRETAIHILAGAGRI 1120
            + SGI  D V Y +MI  + +A L   A+ L+ E+R     PD +   T + +     + 
Sbjct: 263  KWSGITPDLVAYNSMINVFGKAKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKF 322

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
             EA  VF +  E     ++     MI+++ +         +F  MRK+G  P+      +
Sbjct: 323  IEALSVFSEMNEVRCRLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTL 382

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            L  Y + + F +A  ++  MQ +        +  MI +YG   E EK   + +++ +   
Sbjct: 383  LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGI 442

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRG 1582
                  +  +  I+ +A +L+ A+ +  ++   G
Sbjct: 443  EPNAITYSTIISIWGKAGKLDRAAILFQKLRSSG 476


>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Solanum tuberosum]
          Length = 668

 Score =  847 bits (2188), Expect = 0.0
 Identities = 419/527 (79%), Positives = 473/527 (89%)
 Frame = +2

Query: 2    LRSTTLYANTDGEYNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEG 181
            +    LY  +   YNV LRNVLRAKQW++A+GLFDEMR+RALSPDRYTYS LIT FGKEG
Sbjct: 140  INEVALYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEG 199

Query: 182  LFNDALSWLQKMDHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYN 361
            LF+DALSWLQKM+ D V GDLVLY NLIELSRKLCDY+KAISIFSRLK SGITPDLVAYN
Sbjct: 200  LFDDALSWLQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGITPDLVAYN 259

Query: 362  SMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRET 541
            +MINV+GKAKLFREA+ LI EMR   V+PDTVSYSTLLTMYVEN KFLEALS+F+EM E 
Sbjct: 260  TMINVFGKAKLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEV 319

Query: 542  NCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEA 721
             C LDLT+CNIMIDVYGQLDMAK+AD+LFWSMRK+GIEPNVVSYNTLLRVYG+AELFGEA
Sbjct: 320  KCSLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEA 379

Query: 722  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISI 901
            IHLFRLMQRK IEQNVVTYNTMI IYGKT+EHEKANNLIQEMQ+ GIEPNAITYSTIISI
Sbjct: 380  IHLFRLMQRKSIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISI 439

Query: 902  WGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR 1081
            WGKVGKLDRAAMLFQKLRSSG+EIDQVLYQTMIVAYERAGL+ HAKRLLHEL+RPDNIPR
Sbjct: 440  WGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 499

Query: 1082 ETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRK 1261
            ETAI ILAG+GRIEEATWVFRQA + GE+K+IAVFE MI L+S+++KY N+IEVFE+MR 
Sbjct: 500  ETAIMILAGSGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYTNLIEVFEKMRG 559

Query: 1262 VGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEK 1441
             G+FP+S VIALVLNAY K+QEF+KA+ VY EM +EGCVF D VHFQM+S+YG RR +E 
Sbjct: 560  TGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEM 619

Query: 1442 VEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSDRG 1582
            VE +++ L  DPNVNKK+LHLVVAGIY++ANR+NDASRI+N+M+ RG
Sbjct: 620  VETLYKMLDSDPNVNKKELHLVVAGIYEKANRVNDASRIVNRMTYRG 666


>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Solanum lycopersicum]
          Length = 665

 Score =  843 bits (2179), Expect = 0.0
 Identities = 417/527 (79%), Positives = 472/527 (89%)
 Frame = +2

Query: 2    LRSTTLYANTDGEYNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEG 181
            +    LY  +   YNV LRNVLRAKQW++A+GLFDEMR+RALSPDRYTYS LIT FGKEG
Sbjct: 137  INEVALYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEG 196

Query: 182  LFNDALSWLQKMDHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYN 361
            LF+DALSWLQKM+ D V GDLVLY NLIELSRKLCDY+KAISIFSRLK SGITPDLVAYN
Sbjct: 197  LFDDALSWLQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGITPDLVAYN 256

Query: 362  SMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRET 541
            +MINV+GKAKLFREA+ L+ EMR   V+PDTVSYSTLLTMYVEN KFLEALS+F+EM E 
Sbjct: 257  TMINVFGKAKLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEV 316

Query: 542  NCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEA 721
             CPLDLT+CNIMIDVYGQLDMAK+AD+LFWSMRK+GIEPNVVSYNTLLRVYG+AELFGEA
Sbjct: 317  KCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEA 376

Query: 722  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISI 901
            IHLFRLMQRK+IEQNVVTYNTMI IYGKT+EHEKANNLIQEMQ+ GIEPNAITYSTIISI
Sbjct: 377  IHLFRLMQRKNIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISI 436

Query: 902  WGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR 1081
            W KVGKLDRAAMLFQKLRSSG+EIDQVLYQTMIVAYERAGL+ HAKRLLHEL+RPDNIPR
Sbjct: 437  WAKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 496

Query: 1082 ETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRK 1261
            ETAI ILAG+GRIEEATWVFRQA + GE+K+IAVFE MI L+S+++KY N+IEVFE+M  
Sbjct: 497  ETAITILAGSGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYTNLIEVFEKMSG 556

Query: 1262 VGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEK 1441
             G+FP+S VIALVLNAY K+QEF+KA+ VY EM +EGCVF D VHFQM+S+YG RR +E 
Sbjct: 557  AGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEM 616

Query: 1442 VEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSDRG 1582
            VE +++ L  DPNVNKK+LHLVVA IY++ANR+NDASRIIN+M+ RG
Sbjct: 617  VETLYKVLDSDPNVNKKELHLVVAAIYEKANRMNDASRIINRMTYRG 663



 Score =  166 bits (421), Expect = 2e-38
 Identities = 114/445 (25%), Positives = 212/445 (47%), Gaps = 4/445 (0%)
 Frame = +2

Query: 299  AISIFSRLKKSGITPDLVAYNSMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLT 478
            A  +F  +++  ++PD   Y+++I  +GK  LF +A S + +M +  V  D V Y  L+ 
Sbjct: 166  AYGLFDEMRQRALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDHVSGDLVLYCNLIE 225

Query: 479  MYVENHKFLEALSIFAEMRETNCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEP 658
            +  +   + +A+SIF+ ++ +    DL + N MI+V+G+  + ++A  L   MR +G+ P
Sbjct: 226  LSRKLCDYTKAISIFSRLKTSGITPDLVAYNTMINVFGKAKLFREAQLLVKEMRSVGVLP 285

Query: 659  NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLI 838
            + VSY+TLL +Y + + F EA+ +F  M       ++ T N MI +YG+    ++A+ L 
Sbjct: 286  DTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLF 345

Query: 839  QEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERA 1018
              M+  GIEPN ++Y+T++ ++G+      A  LF+ ++   IE + V Y TMI  Y + 
Sbjct: 346  WSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKNIEQNVVTYNTMIKIYGKT 405

Query: 1019 GLIGHAKRLLHELRR----PDNIPRETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVF 1186
                 A  L+ E++     P+ I   T I I A  G+++ A  +F++    G   +  ++
Sbjct: 406  LEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLDRAAMLFQKLRSSGVEIDQVLY 465

Query: 1187 EKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQD 1366
            + MI  + +    A+   +   +++    P  T I ++  +       ++A  V+ +  D
Sbjct: 466  QTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGS----GRIEEATWVFRQAFD 521

Query: 1367 EGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLND 1546
             G +    V   MI +Y   R++  +  +FEK                            
Sbjct: 522  AGELKDIAVFECMIELYSRNRKYTNLIEVFEK---------------------------- 553

Query: 1547 ASRIINQMSDRGFL**S*ILLLVLN 1621
                   MS  G+   S ++ LVLN
Sbjct: 554  -------MSGAGYFPNSNVIALVLN 571


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g39980, chloroplastic; Flags: Precursor
            gi|10176990|dbj|BAB10222.1| unnamed protein product
            [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 678

 Score =  839 bits (2168), Expect = 0.0
 Identities = 410/516 (79%), Positives = 470/516 (91%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVVLRNVLRAKQ+++AHGLFDEMR+RAL+PDRYTYS LIT FGKEG+F+ ALSWLQKM+
Sbjct: 158  YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 217

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIELSR+LCDYSKAISIFSRLK+SGITPDLVAYNSMINVYGKAKLFR
Sbjct: 218  QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFR 277

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR LI EM  A V+P+TVSYSTLL++YVENHKFLEALS+FAEM+E NC LDLT+CNIMI
Sbjct: 278  EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDM K+AD+LFWS+RK+ IEPNVVSYNT+LRVYG+AELFGEAIHLFRLMQRKDIE
Sbjct: 338  DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 397

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI IYGKTMEHEKA NL+QEMQSRGIEPNAITYSTIISIWGK GKLDRAA L
Sbjct: 398  QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 457

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSG+EIDQVLYQTMIVAYER GL+GHAKRLLHEL+ PDNIPRETAI ILA AGR 
Sbjct: 458  FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRT 517

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA E GE+K+I+VF  MINL+S++++Y NVIEVFE+MR  G+FPDS VIA+V
Sbjct: 518  EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 577

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LNAY K +EF+KA+ VY EMQ+EGCVF D VHFQM+S+Y  +++FE VE++F++L  DPN
Sbjct: 578  LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPN 637

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            VN K+LHLVVA +Y+RA++LNDASR++N+M +RG L
Sbjct: 638  VNSKELHLVVAALYERADKLNDASRVMNRMRERGIL 673



 Score =  130 bits (327), Expect = 2e-27
 Identities = 105/491 (21%), Positives = 207/491 (42%), Gaps = 37/491 (7%)
 Frame = +2

Query: 260  LIELSRKLCDYSKAISIFSRL-KKSGITPDLVAYNSMINVYGKAKLFREARSLIDEMRRA 436
            ++ L  +  D+ +++++   + +++  TP + AYN ++    +AK F  A  L DEMR+ 
Sbjct: 125  MVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQR 184

Query: 437  KVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMIDVYGQLDMAKDA 616
             + PD  +YSTL+T + +   F  ALS   +M +     DL                   
Sbjct: 185  ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDL------------------- 225

Query: 617  DKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMI 796
                            V Y+ L+ +      + +AI +F  ++R  I  ++V YN+MI +
Sbjct: 226  ----------------VLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 269

Query: 797  YGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEID 976
            YGK     +A  LI+EM   G+ PN ++YST++S++ +  K   A  +F +++     +D
Sbjct: 270  YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329

Query: 977  QVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR----ETAIHILAGAGRIEEATWVFR 1144
                  MI  Y +  ++  A RL   LR+ D  P      T + +   A    EA  +FR
Sbjct: 330  LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389

Query: 1145 QAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALVLNAYSKMQ 1324
                +   + +  +  MI ++ K  ++     + + M+  G  P++   + +++ + K  
Sbjct: 390  LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449

Query: 1325 EFDKAEGVYTEMQDEGCVFFDGVHFQM-------ISMYGWRREF---------------- 1435
            + D+A  ++ +++  G V  D V +Q        + + G  +                  
Sbjct: 450  KLDRAATLFQKLRSSG-VEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 508

Query: 1436 ---------EKVEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
                     E+   +F +  +   V    +   +  +Y R  R  +   +  +M   G+ 
Sbjct: 509  TILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYF 568

Query: 1589 **S*ILLLVLN 1621
              S ++ +VLN
Sbjct: 569  PDSNVIAMVLN 579


>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic [Vitis vinifera]
            gi|296087770|emb|CBI35026.3| unnamed protein product
            [Vitis vinifera]
          Length = 675

 Score =  839 bits (2168), Expect = 0.0
 Identities = 408/514 (79%), Positives = 471/514 (91%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVV+RNVLRAKQWE+AHGLF+EMR+RAL+PDRYTYS LIT FGKEG+F+ ALSWLQKM+
Sbjct: 158  YNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWLQKME 217

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIELSRKLCDYSKAISIFSRLK+SGI+PDLVAYNSMINV+GKAKLFR
Sbjct: 218  QDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFR 277

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR L+ EMR   VMPDTVSYSTLL+MYVEN K++EALS+F+EM E  CPLDLT+CN+MI
Sbjct: 278  EARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMI 337

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDMAK+AD+LFWSMRK+GIEP +VSYNTLLRVYG+AELFGEAIHLFRLMQRKDIE
Sbjct: 338  DVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIE 397

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI IYGK++EHEKA NL+QEMQ+RGIEPNAITYSTIISIW K GKLDRAAML
Sbjct: 398  QNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAML 457

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSGIEIDQVLYQTMIVAYERAGL+ HAKRLLHEL+RPDNIPRETAI ILAGAGRI
Sbjct: 458  FQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRI 517

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA + GE+K+I VF  MI+LFS+++K+ NVIEVF++MR  G+FPDS VIALV
Sbjct: 518  EEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALV 577

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LNA  K++EF+KA+ +Y EM++EGCVF D VHFQM+S+YG R +F+ V+++FE+L  DPN
Sbjct: 578  LNACGKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPN 637

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRG 1582
            +NKK+LHLVVA IY+RANRLNDAS+I+N+M +RG
Sbjct: 638  INKKELHLVVASIYERANRLNDASQIMNRMRERG 671


>dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
          Length = 546

 Score =  839 bits (2168), Expect = 0.0
 Identities = 410/516 (79%), Positives = 470/516 (91%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVVLRNVLRAKQ+++AHGLFDEMR+RAL+PDRYTYS LIT FGKEG+F+ ALSWLQKM+
Sbjct: 26   YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 85

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIELSR+LCDYSKAISIFSRLK+SGITPDLVAYNSMINVYGKAKLFR
Sbjct: 86   QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFR 145

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR LI EM  A V+P+TVSYSTLL++YVENHKFLEALS+FAEM+E NC LDLT+CNIMI
Sbjct: 146  EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 205

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDM K+AD+LFWS+RK+ IEPNVVSYNT+LRVYG+AELFGEAIHLFRLMQRKDIE
Sbjct: 206  DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 265

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI IYGKTMEHEKA NL+QEMQSRGIEPNAITYSTIISIWGK GKLDRAA L
Sbjct: 266  QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 325

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSG+EIDQVLYQTMIVAYER GL+GHAKRLLHEL+ PDNIPRETAI ILA AGR 
Sbjct: 326  FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRT 385

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA E GE+K+I+VF  MINL+S++++Y NVIEVFE+MR  G+FPDS VIA+V
Sbjct: 386  EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 445

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LNAY K +EF+KA+ VY EMQ+EGCVF D VHFQM+S+Y  +++FE VE++F++L  DPN
Sbjct: 446  LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPN 505

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            VN K+LHLVVA +Y+RA++LNDASR++N+M +RG L
Sbjct: 506  VNSKELHLVVAALYERADKLNDASRVMNRMRERGIL 541



 Score =  129 bits (325), Expect = 3e-27
 Identities = 104/482 (21%), Positives = 203/482 (42%), Gaps = 37/482 (7%)
 Frame = +2

Query: 287  DYSKAISIFSRL-KKSGITPDLVAYNSMINVYGKAKLFREARSLIDEMRRAKVMPDTVSY 463
            D+ +++++   + +++  TP + AYN ++    +AK F  A  L DEMR+  + PD  +Y
Sbjct: 2    DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 61

Query: 464  STLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRK 643
            STL+T + +   F  ALS   +M +     DL                            
Sbjct: 62   STLITSFGKEGMFDSALSWLQKMEQDRVSGDL---------------------------- 93

Query: 644  LGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEK 823
                   V Y+ L+ +      + +AI +F  ++R  I  ++V YN+MI +YGK     +
Sbjct: 94   -------VLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFRE 146

Query: 824  ANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIV 1003
            A  LI+EM   G+ PN ++YST++S++ +  K   A  +F +++     +D      MI 
Sbjct: 147  ARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID 206

Query: 1004 AYERAGLIGHAKRLLHELRRPDNIPR----ETAIHILAGAGRIEEATWVFRQAAEEGEIK 1171
             Y +  ++  A RL   LR+ D  P      T + +   A    EA  +FR    +   +
Sbjct: 207  VYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQ 266

Query: 1172 EIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALVLNAYSKMQEFDKAEGVY 1351
             +  +  MI ++ K  ++     + + M+  G  P++   + +++ + K  + D+A  ++
Sbjct: 267  NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 326

Query: 1352 TEMQDEGCVFFDGVHFQM-------ISMYGWRREF------------------------- 1435
             +++  G V  D V +Q        + + G  +                           
Sbjct: 327  QKLRSSG-VEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRT 385

Query: 1436 EKVEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL**S*ILLLV 1615
            E+   +F +  +   V    +   +  +Y R  R  +   +  +M   G+   S ++ +V
Sbjct: 386  EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 445

Query: 1616 LN 1621
            LN
Sbjct: 446  LN 447


>ref|XP_007215021.1| hypothetical protein PRUPE_ppa003340mg [Prunus persica]
            gi|462411171|gb|EMJ16220.1| hypothetical protein
            PRUPE_ppa003340mg [Prunus persica]
          Length = 584

 Score =  837 bits (2162), Expect = 0.0
 Identities = 406/529 (76%), Positives = 474/529 (89%)
 Frame = +2

Query: 2    LRSTTLYANTDGEYNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEG 181
            +    LY  +   YNVV+RNVLRAKQWE+AHGLF+EMR+RAL+PDRYTYS LIT FGK G
Sbjct: 54   INEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFGKAG 113

Query: 182  LFNDALSWLQKMDHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYN 361
            +F+ ALSWLQKM+ D V GDLVLYSNLIELSRKLCDYSKAISIFSRLK+ GI PDLVAYN
Sbjct: 114  MFDSALSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLVAYN 173

Query: 362  SMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRET 541
            SMINV+GKAKLFREAR L+ EMR   V+PDTVSYSTLL+MY+EN KF+EALS+F+EM E 
Sbjct: 174  SMINVFGKAKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEMNEV 233

Query: 542  NCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEA 721
             CPLDLT+CNIMIDVYGQLDMAK+AD+LFWSMRK+G+EPNVVSYNTLLRVYGDAELFGEA
Sbjct: 234  KCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEA 293

Query: 722  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISI 901
            IHLFRLMQR DIEQNVVTYNTMI IYGK++EHEKA NL+QEMQ+ GI+PNA+TYSTIISI
Sbjct: 294  IHLFRLMQRMDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISI 353

Query: 902  WGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR 1081
            WGK GKLDRAAMLFQKLRSSG+EIDQVLYQTMIVAYER GL+ HAKRLLHEL+RPDNIPR
Sbjct: 354  WGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPR 413

Query: 1082 ETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRK 1261
            ETAI ILAGAGRIEEATWVFRQA + GE+K+I+VF  MI+LFS+++KYAN IEVFE+MR 
Sbjct: 414  ETAITILAGAGRIEEATWVFRQAFDAGEVKDISVFGCMIDLFSRNRKYANCIEVFEKMRV 473

Query: 1262 VGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEK 1441
             G+FP S VI LVLNA+ K++EF+KA+ +Y EMQ+EGCVF D VHFQM+++YG R++F+ 
Sbjct: 474  AGYFPASNVIDLVLNAFGKLREFEKADALYREMQEEGCVFSDEVHFQMLTLYGARKDFKM 533

Query: 1442 VEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            VEA+F++L+ DPN+NKK+LHLVVA IY+R+NRLNDASRI+N+M++RG L
Sbjct: 534  VEALFKRLMCDPNINKKELHLVVASIYERSNRLNDASRIMNKMNERGIL 582



 Score = 98.2 bits (243), Expect = 1e-17
 Identities = 76/324 (23%), Positives = 146/324 (45%), Gaps = 4/324 (1%)
 Frame = +2

Query: 623  LFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYG 802
            L W   +    P+V +YN ++R    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 51   LDWINEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFG 110

Query: 803  KTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQV 982
            K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+  GI  D V
Sbjct: 111  KAGMFDSALSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLV 170

Query: 983  LYQTMIVAYERAGLIGHAKRLLHELRR----PDNIPRETAIHILAGAGRIEEATWVFRQA 1150
             Y +MI  + +A L   A+ LL E+R     PD +   T + +     +  EA  VF + 
Sbjct: 171  AYNSMINVFGKAKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEM 230

Query: 1151 AEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALVLNAYSKMQEF 1330
             E     ++     MI+++ +         +F  MRK+G  P+      +L  Y   + F
Sbjct: 231  NEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELF 290

Query: 1331 DKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPNVNKKDLHLVV 1510
             +A  ++  MQ          +  MI +YG   E EK   + +++           +  +
Sbjct: 291  GEAIHLFRLMQRMDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTI 350

Query: 1511 AGIYDRANRLNDASRIINQMSDRG 1582
              I+ +A +L+ A+ +  ++   G
Sbjct: 351  ISIWGKAGKLDRAAMLFQKLRSSG 374


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297316573|gb|EFH46996.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 680

 Score =  836 bits (2159), Expect = 0.0
 Identities = 409/516 (79%), Positives = 467/516 (90%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVVLRNVLRAKQ+ +AHGLFDEMR+RAL+PDRYTYS LIT FGKEG+F+ ALSWLQKM+
Sbjct: 160  YNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 219

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIELSR+LCDYSKAISIFSRLK+SGITPDLVAYNSMINVYGKAKLF+
Sbjct: 220  QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFK 279

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR LI EM  A V P+TVSYSTLL++YVENHKFLEALS+FAEM+E NCPLDLT+CNIMI
Sbjct: 280  EARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMI 339

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDM K+AD+LFWS+RK+ IEPNVVSYNT+LRVYG+AELFGEAIHLFRLMQRKDIE
Sbjct: 340  DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 399

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI IYGKTMEHEKA NL+QEMQSRGIEPNAITYSTIISIWGK GKLDRAA L
Sbjct: 400  QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 459

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSG+EIDQVLYQTMIVAYER GL+GHAKRLLHEL+ PDNIPRETAI ILA AG  
Sbjct: 460  FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGST 519

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA E GE+K+I+VF  MINL+S++++Y NVIEVFE+MR  G+FPDS  IA+V
Sbjct: 520  EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMV 579

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LNAY K +EF+KA+ VY EMQ+EGCVF D VHFQM+S+Y  +++FE VE++FE+L  DPN
Sbjct: 580  LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLESDPN 639

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            VN K+LHLVVA +Y+RA++LNDASR++N+M +RG L
Sbjct: 640  VNSKELHLVVAALYERADKLNDASRVMNRMRERGIL 675


>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
            gi|482554761|gb|EOA18954.1| hypothetical protein
            CARUB_v10007588mg [Capsella rubella]
          Length = 679

 Score =  835 bits (2157), Expect = 0.0
 Identities = 408/516 (79%), Positives = 468/516 (90%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVVLRNVLRAKQ+++AHGLFDEMR+RAL+PDRYTYS LIT FGKEG+F+ ALSWLQKM+
Sbjct: 160  YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 219

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIELSR+LCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR
Sbjct: 220  QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 279

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR LI EM  A V+P+TVSYSTLL++YVEN KFLEALS+FAEM+E NCPLDLT+CNIMI
Sbjct: 280  EARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTCNIMI 339

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDM K+AD+LFWS+RK+ IEPNVVSYNT+LRVYG+AELFGEAIHLFRLMQRKDIE
Sbjct: 340  DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 399

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI IYGKTMEHEKA NL++EMQSRGIEPNAITYSTIISIWGK GKLDRAA L
Sbjct: 400  QNVVTYNTMIKIYGKTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 459

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSG+EIDQVLYQTMIVAYER GL+GHAKRLLHEL+ PDNIPRETAI ILA AGR 
Sbjct: 460  FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRT 519

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA E GE+K+I+VF  MINL+S++++Y NVIEVFE+MR  G+FPDS  IA+V
Sbjct: 520  EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMV 579

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LNAY K +EF+KA+ VY EMQ+EGCVF D VHFQM+S+Y  +++FE VE +F++L  +PN
Sbjct: 580  LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVETLFQRLESEPN 639

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            VN K+LHLVVA +Y+RA++LNDASR++N+M +RG L
Sbjct: 640  VNSKELHLVVAALYERADKLNDASRVMNRMRERGIL 675


>ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutrema salsugineum]
            gi|557106704|gb|ESQ47019.1| hypothetical protein
            EUTSA_v10028245mg [Eutrema salsugineum]
          Length = 683

 Score =  832 bits (2148), Expect = 0.0
 Identities = 406/516 (78%), Positives = 467/516 (90%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVVLRNVLRAKQ+++AHGLFDEMR+RAL+PDRYTYS LIT FGKEG+F+ ALSWLQKM+
Sbjct: 163  YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 222

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIELSR+LCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR
Sbjct: 223  QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 282

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR LI EM+ A V P+TVSYSTLL++YVEN KFLEALS+FAEM+E NCPLDLT+CN+MI
Sbjct: 283  EARLLIKEMKEAGVEPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTCNVMI 342

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDM K+AD+LFWSMRK+ IEPNVVSYNT+LRVYG+A+L GEAIHLFRLMQRKDIE
Sbjct: 343  DVYGQLDMVKEADRLFWSMRKMDIEPNVVSYNTILRVYGEADLIGEAIHLFRLMQRKDIE 402

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI +YGKT+EHEKA NL+QEMQSRGIEPNAITYSTIISIWGK GKLDRAA L
Sbjct: 403  QNVVTYNTMIKMYGKTLEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 462

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLR SG+EIDQVLYQTMIVAYER GL+GHAKRLL EL++PDNIPRETAI ILA AGRI
Sbjct: 463  FQKLRRSGVEIDQVLYQTMIVAYERVGLMGHAKRLLQELKQPDNIPRETAITILAKAGRI 522

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA E GE+K+I VF  MI+L+S++++Y NVIEVFE+MR  G+FPDS  IA+V
Sbjct: 523  EEATWVFRQAFESGEVKDITVFGCMISLYSRNQRYVNVIEVFEKMRSAGYFPDSNAIAIV 582

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LNAY K +EF+KA+ VY EMQ+EGCVF D VHFQM+S+Y  +++FE VE++FE+L  DPN
Sbjct: 583  LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLESDPN 642

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            VN K+LHLVVA +Y+RA+RLNDASR++N+M +RG L
Sbjct: 643  VNSKELHLVVAALYERADRLNDASRVMNRMRERGIL 678


>ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao] gi|508711449|gb|EOY03346.1| Tetratricopeptide
            repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 672

 Score =  830 bits (2144), Expect = 0.0
 Identities = 403/516 (78%), Positives = 469/516 (90%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVV+RNV++AKQW +AHGLF+EMRE+ L+PDR+TYS LIT FGKEG+F+ ALSWLQKM+
Sbjct: 155  YNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTYSTLITYFGKEGMFDSALSWLQKME 214

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
            +D V GDLVL+SNLIELSRKL DYSKAISIF++LK+SGI PDLV YNSMINV+GKAKLFR
Sbjct: 215  NDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKRSGIVPDLVCYNSMINVFGKAKLFR 274

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR L+ EMR   VMPDTVSYST+L MYVENHKF+EALS+FAEM E  CPLDLT+CNIMI
Sbjct: 275  EARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFAEMNEVKCPLDLTTCNIMI 334

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDMAK+AD+LFW MRK+GIEPNVVSYNTLL+VYG+AEL+GEAIHLFRLM RKDIE
Sbjct: 335  DVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMHRKDIE 394

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI IYGK++EHEKA NL+QEMQ+RGIEPNAITYSTIISIWGK GKLDRAAML
Sbjct: 395  QNVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAML 454

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSG+EIDQVLYQTMIVAYERAGL+ HAKRLLHEL++PDN+PR+TAI ILA AGRI
Sbjct: 455  FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNLPRDTAIMILARAGRI 514

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA + GE+K+I+VF  MI+LFS++KK+ANVIEVFE+MR  G+FPDS VIALV
Sbjct: 515  EEATWVFRQACDAGEVKDISVFGLMIDLFSRNKKHANVIEVFEKMRSAGYFPDSNVIALV 574

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LNAY K++EFDKA+ VY EMQ+EGCVF D VHFQM+S+ G R++F+ VE++FEKL  DPN
Sbjct: 575  LNAYGKLREFDKADAVYKEMQEEGCVFPDEVHFQMLSLCGARKDFKMVESLFEKLDSDPN 634

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            +NKK+LHLVVA IY+R NRLNDAS+I+N+MS+RG L
Sbjct: 635  INKKELHLVVASIYERGNRLNDASQIMNRMSERGIL 670



 Score =  105 bits (263), Expect = 5e-20
 Identities = 79/337 (23%), Positives = 156/337 (46%), Gaps = 7/337 (2%)
 Frame = +2

Query: 593  QLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVV 772
            + D  +    L W   +    P++ +YN ++R    A+ +  A  LF  M+ K +  +  
Sbjct: 129  ETDWQRSLALLDWVNEEARYSPSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRF 188

Query: 773  TYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL 952
            TY+T+I  +GK    + A + +Q+M++ G+  + + +S +I +  K+    +A  +F KL
Sbjct: 189  TYSTLITYFGKEGMFDSALSWLQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKL 248

Query: 953  RSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELR----RPDNIPRETAIHILAGAGRI 1120
            + SGI  D V Y +MI  + +A L   A+ L+ E+R     PD +   T +++     + 
Sbjct: 249  KRSGIVPDLVCYNSMINVFGKAKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKF 308

Query: 1121 EEATWVFRQAAEEGEIK---EIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVI 1291
             EA  VF   AE  E+K   ++     MI+++ +         +F  MRK+G  P+    
Sbjct: 309  VEALSVF---AEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSY 365

Query: 1292 ALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQ 1471
              +L  Y + + + +A  ++  M  +        +  MI +YG   E EK   + +++  
Sbjct: 366  NTLLKVYGEAELYGEAIHLFRLMHRKDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQN 425

Query: 1472 DPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSDRG 1582
                     +  +  I+ +A +L+ A+ +  ++   G
Sbjct: 426  RGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSG 462


>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Cucumis sativus]
            gi|449530101|ref|XP_004172035.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  827 bits (2137), Expect = 0.0
 Identities = 404/524 (77%), Positives = 469/524 (89%)
 Frame = +2

Query: 2    LRSTTLYANTDGEYNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEG 181
            +    LY  +   YNVVLRNVLRAKQWE+AHGLFDEMR+RAL+ DRYTYS LIT FGKEG
Sbjct: 149  INEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEG 208

Query: 182  LFNDALSWLQKMDHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYN 361
            +F+ ALSWLQKM+ DRV GDLVLYSNLIELSRKLCDYSKAISIFSRLK+SGITPD+VAYN
Sbjct: 209  MFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYN 268

Query: 362  SMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRET 541
            +MINV+GKAKLFREAR L+ EMR   VMPDTVSYSTLL M+VEN KFLEALS+ +EM+E 
Sbjct: 269  TMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEV 328

Query: 542  NCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEA 721
            NCPLDLT+CNIMIDVYGQLDM K+AD+LFW MRK+GIEPNVVSYNT+LRVYG+AELFGEA
Sbjct: 329  NCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEA 388

Query: 722  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISI 901
            IHLFRLMQRK+I+QNVVTYNTMI IYGKT+EHEKA NL+Q+MQ RGIEPNAITYSTIISI
Sbjct: 389  IHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISI 448

Query: 902  WGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR 1081
            WGK GKLDR+AMLFQKLRSSG EIDQVLYQTMIVAYE+AGL+GHAKRLLHEL++PDNIPR
Sbjct: 449  WGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPR 508

Query: 1082 ETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRK 1261
             TAI ILA AGRIEEATWVFRQA + GE+K+I+VFE MI+LFS++KK+ NV+EVFE+MR 
Sbjct: 509  TTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRN 568

Query: 1262 VGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEK 1441
            VG FP+S VIALVLNAY K+++FD A+ +Y EMQ+EGCVF D VHFQM+S+YG R ++++
Sbjct: 569  VGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLYGARNDYKR 628

Query: 1442 VEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMS 1573
            +E++FE+L  DPN+NKK+LHLVVA IY+R NR  DASRIIN+M+
Sbjct: 629  LESLFERLDSDPNINKKELHLVVASIYERGNRSKDASRIINRMN 672



 Score =  108 bits (270), Expect = 8e-21
 Identities = 93/407 (22%), Positives = 173/407 (42%), Gaps = 66/407 (16%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YN ++    +AK +  A  L  EMR   + PD  +YS L+  F +   F +ALS + +M 
Sbjct: 267  YNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMK 326

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
                P DL   + +I++  +L    +A  +F R++K GI P++V+YN+++ VYG+A+LF 
Sbjct: 327  EVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFG 386

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EA  L   M+R ++  + V+Y+T++ +Y +  +  +A ++  +M++     +  + + +I
Sbjct: 387  EAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTII 446

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYN---------------------------- 676
             ++G+      +  LF  +R  G E + V Y                             
Sbjct: 447  SIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNI 506

Query: 677  ---TLLRVYGDAELFGEAIHLFR-------------------LMQRKDIEQNVV------ 772
               T + +   A    EA  +FR                   L  R    +NV+      
Sbjct: 507  PRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKM 566

Query: 773  ----------TYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKL 922
                          ++  YGK  + + A+ L  EMQ  G       +  ++S++G     
Sbjct: 567  RNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLYGARNDY 626

Query: 923  DRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRR 1063
             R   LF++L S      + L+  +   YER      A R+++ + +
Sbjct: 627  KRLESLFERLDSDPNINKKELHLVVASIYERGNRSKDASRIINRMNK 673



 Score =  104 bits (260), Expect = 1e-19
 Identities = 78/324 (24%), Positives = 150/324 (46%), Gaps = 4/324 (1%)
 Frame = +2

Query: 623  LFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYG 802
            L W   +    P+V +YN +LR    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 146  LDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFG 205

Query: 803  KTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQV 982
            K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+ SGI  D V
Sbjct: 206  KEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIV 265

Query: 983  LYQTMIVAYERAGLIGHAKRLLHELR----RPDNIPRETAIHILAGAGRIEEATWVFRQA 1150
             Y TMI  + +A L   A+ LL E+R     PD +   T +++     +  EA  V  + 
Sbjct: 266  AYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEM 325

Query: 1151 AEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALVLNAYSKMQEF 1330
             E     ++     MI+++ +         +F RMRK+G  P+      +L  Y + + F
Sbjct: 326  KEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELF 385

Query: 1331 DKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPNVNKKDLHLVV 1510
             +A  ++  MQ +        +  MI +YG   E EK   + + + +         +  +
Sbjct: 386  GEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTI 445

Query: 1511 AGIYDRANRLNDASRIINQMSDRG 1582
              I+ +A +L+ ++ +  ++   G
Sbjct: 446  ISIWGKAGKLDRSAMLFQKLRSSG 469


>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
            gi|557533112|gb|ESR44295.1| hypothetical protein
            CICLE_v10011224mg [Citrus clementina]
          Length = 677

 Score =  827 bits (2136), Expect = 0.0
 Identities = 403/513 (78%), Positives = 466/513 (90%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVVLRNVLRAKQWE+AHGLFDEMR+R ++PDRYTYS LIT FGKEG+F+ A+SWLQ+M+
Sbjct: 157  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 216

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIEL+RKL DYSKAISIFSRLK SGI PDLVAYN+MINV+GKAKLF+
Sbjct: 217  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 276

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR LI+EMR   V PDTVSYSTLL +YVENHKF+EALS+FAEM E NCPLDLT+CNIMI
Sbjct: 277  EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 336

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDMAKDAD+LFWSMRK+GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IE
Sbjct: 337  DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 396

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI IYGK++EHEKA NL+QEMQ+RGIEPNAITYSTII+IWGK GKLDRAAML
Sbjct: 397  QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 456

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSG+EID VLYQTMIVAYER GL+ HAKRLLHELR+PD IPRETAI ILA AGRI
Sbjct: 457  FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPDTIPRETAITILARAGRI 516

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA + GE+K+I+VF  MI LFS++KKYANVIEVFE+MR  G+FPDS +IALV
Sbjct: 517  EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 576

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LN+Y K++EF+ A+ +Y+EMQ+EGCVF D VHFQM+S+YG R++F  +E++FE+L  D N
Sbjct: 577  LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 636

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDR 1579
            +NKK+LH VVAGIY+RANRLNDASRI+N+M+ R
Sbjct: 637  INKKELHHVVAGIYERANRLNDASRIMNRMNKR 669


>ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Citrus sinensis]
          Length = 677

 Score =  825 bits (2131), Expect = 0.0
 Identities = 402/513 (78%), Positives = 466/513 (90%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVVLRNVLRAKQWE+AHGLFDEMR+R ++PDRYTYS LIT FGKEG+F+ A+SWLQ+M+
Sbjct: 157  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 216

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIEL+RKL DYSKAISIFSRLK SGI PDLVAYN+MINV+GKAKLF+
Sbjct: 217  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 276

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR LI+EMR   V PDTVSYSTLL +YVENHKF+EALS+FAEM E NCPLDLT+CNIMI
Sbjct: 277  EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 336

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDMAKDAD+LFWSMRK+GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IE
Sbjct: 337  DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 396

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI IYGK++EHEKA NL+QEMQ+RGIEPNAITYSTII+IWGK GKLDRAAML
Sbjct: 397  QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 456

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSG+EID VLYQTMIVAYER GL+ HAKRLLHELR+P+ IPRETAI ILA AGRI
Sbjct: 457  FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI 516

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA + GE+K+I+VF  MI LFS++KKYANVIEVFE+MR  G+FPDS +IALV
Sbjct: 517  EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 576

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LN+Y K++EF+ A+ +Y+EMQ+EGCVF D VHFQM+S+YG R++F  +E++FE+L  D N
Sbjct: 577  LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 636

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDR 1579
            +NKK+LH VVAGIY+RANRLNDASRI+N+M+ R
Sbjct: 637  INKKELHHVVAGIYERANRLNDASRIMNRMNKR 669


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  823 bits (2127), Expect = 0.0
 Identities = 404/516 (78%), Positives = 464/516 (89%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVVLRNVLRAK+W++AHGLFDEMR+RALSPDRYTYS LIT FGK G+F+++L WLQ+M+
Sbjct: 137  YNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQME 196

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIELSRKLCDYSKAISIF RLK+SGITPDLVAYNSMINV+GKA+LFR
Sbjct: 197  QDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFR 256

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EAR L+ EMR   V+PDTVSYSTLL++YVEN KF+EALS+FAEM E NC LDL +CNIMI
Sbjct: 257  EARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMI 316

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDM K+AD+LFWSMRK+GIEPNVVSYNTLL+VYG+AELFGEAIHLFRLMQRK+IE
Sbjct: 317  DVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIE 376

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI IYGK++EHEKA NL+QEMQ RGIEPNAITYSTIISIWGK GKLDRAAML
Sbjct: 377  QNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAML 436

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSG+EIDQVLYQTMIVAYERAGL+ HAKRLLH+L+ PD IPR+TAI ILA AGRI
Sbjct: 437  FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRI 496

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA + GE+K+I+VF  MI LFS++K+ ANV+EVFE+MR  G+FPDS VIALV
Sbjct: 497  EEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALV 556

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LNAY K++EF+KA+ VY EMQ+E CVF D VHFQM+S+YG R++F  VE++FEKL  DPN
Sbjct: 557  LNAYGKLREFEKADAVYREMQEEECVFPDEVHFQMLSLYGARKDFIMVESLFEKLDSDPN 616

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            +NKK+LHLVVA IY+R NRLNDASRI+N+MS  G L
Sbjct: 617  INKKELHLVVASIYERQNRLNDASRIMNRMSKEGML 652


>ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Populus trichocarpa]
            gi|550320029|gb|EEF04162.2| hypothetical protein
            POPTR_0017s11210g [Populus trichocarpa]
          Length = 639

 Score =  822 bits (2124), Expect = 0.0
 Identities = 403/516 (78%), Positives = 463/516 (89%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YNVVLRNVLRAKQW+ AHGLFDEMR RAL+PDRYTYS LIT FGK G+F+ +L WLQ+M+
Sbjct: 120  YNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQME 179

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
             DRV GDLVLYSNLIELSRKLCDYSKAISIF RLK+SGI PDLVAYNSMINV+GKAKLFR
Sbjct: 180  QDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFR 239

Query: 401  EARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMI 580
            EA+ L+ EMR   VMPDTVSYSTLL++YVEN KF+EALS+FAEM E  CPLDLT+CN+MI
Sbjct: 240  EAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMI 299

Query: 581  DVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 760
            DVYGQLDMAK+AD+LFWSMRK+GIEPNVVSYNTLLRVYG+ ELFGEAIHLFRLMQ+KDIE
Sbjct: 300  DVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIE 359

Query: 761  QNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 940
            QNVVTYNTMI +YGK++EHEKA NL+QEMQ+RGIEPNAITYSTIISIWGK GKLDRAAML
Sbjct: 360  QNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAML 419

Query: 941  FQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPRETAIHILAGAGRI 1120
            FQKLRSSG+EIDQVLYQTMIVAYER+GL+ HAKRLLHEL+ PD+IPRETAI ILA AGRI
Sbjct: 420  FQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKILARAGRI 479

Query: 1121 EEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALV 1300
            EEATWVFRQA + GE+K+I+VF  M++LFS+++K ANVIEVFE+MR  G+FPDS VIALV
Sbjct: 480  EEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALV 539

Query: 1301 LNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPN 1480
            LNAY K+ EF+KA+ +Y EMQ+E CVF D VHFQM+S+YG R++F  +EA+FE+L  DPN
Sbjct: 540  LNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQMLSLYGARKDFMMIEALFERLDSDPN 599

Query: 1481 VNKKDLHLVVAGIYDRANRLNDASRIINQMSDRGFL 1588
            +NKK+LHLVVA IY+R NRLNDASRI+N+MS  G L
Sbjct: 600  INKKELHLVVASIYERKNRLNDASRIMNRMSKGGVL 635


>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 672

 Score =  816 bits (2109), Expect = 0.0
 Identities = 397/525 (75%), Positives = 462/525 (88%)
 Frame = +2

Query: 2    LRSTTLYANTDGEYNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEG 181
            +    LY  +   YNVVLRNVLRA QW++AHGLFDEMR RAL+PDRYTYS LIT FGK G
Sbjct: 142  INDVALYTPSVFAYNVVLRNVLRAGQWDLAHGLFDEMRHRALAPDRYTYSTLITAFGKAG 201

Query: 182  LFNDALSWLQKMDHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYN 361
            +F+ ALSWLQKM+ DRV GDLVLYSNLIELSRKLCDY+KAI+IFSRLK+ GI PDLVA+N
Sbjct: 202  MFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYTKAIAIFSRLKRMGIVPDLVAFN 261

Query: 362  SMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRET 541
            SMINV+GKAKLFREAR L+ EMR   V PDTVSYSTLLTMYVEN KFLEAL +F EM E 
Sbjct: 262  SMINVFGKAKLFREARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGVFREMSEV 321

Query: 542  NCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEA 721
             C LD+T+CN+MIDVYGQLDMAK+AD+LFWSMRK+ IEPNVVSYNTLLRVYGDAELFGEA
Sbjct: 322  KCGLDITTCNVMIDVYGQLDMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGDAELFGEA 381

Query: 722  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISI 901
            IHLFR+MQR D+EQNVVTYNTMI IYGK++EHEKA NL+QEMQ RGI+PNAITYSTIISI
Sbjct: 382  IHLFRMMQRMDVEQNVVTYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISI 441

Query: 902  WGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR 1081
            WG+ GKLDRAAMLFQKLR+SG+EIDQVLYQTMIV+YER GL+ HAKRLLHEL+RPDNIPR
Sbjct: 442  WGRAGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELKRPDNIPR 501

Query: 1082 ETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRK 1261
            ETAI ILA AGR+EEATWVFRQA E G++K+I+VF  MI L+S+++KYAN IEVFE MR 
Sbjct: 502  ETAITILARAGRVEEATWVFRQAFEAGQVKDISVFGCMIELYSRNRKYANCIEVFENMRV 561

Query: 1262 VGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEK 1441
             G+FP S VI LVLNAY K++EF+KA+ VY EMQ+EGCVF D +HFQM+S+YG R++F+ 
Sbjct: 562  AGYFPASHVIGLVLNAYGKLREFEKADAVYREMQEEGCVFSDEIHFQMLSLYGARKDFKT 621

Query: 1442 VEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSD 1576
            VEAMFE+L+ DPN+NKK+LHLVVAGIY+R+NRLND+ RI+N+M++
Sbjct: 622  VEAMFERLVCDPNINKKELHLVVAGIYERSNRLNDSHRIMNRMNE 666


>ref|XP_007163838.1| hypothetical protein PHAVU_001G268500g [Phaseolus vulgaris]
            gi|561037302|gb|ESW35832.1| hypothetical protein
            PHAVU_001G268500g [Phaseolus vulgaris]
          Length = 677

 Score =  801 bits (2069), Expect = 0.0
 Identities = 392/526 (74%), Positives = 460/526 (87%)
 Frame = +2

Query: 2    LRSTTLYANTDGEYNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEG 181
            +    LY+ +   YNVVLRNVLRAKQW +AHGLFDEMR + LSPDRYTYS LIT F K+G
Sbjct: 144  INEKALYSPSLFAYNVVLRNVLRAKQWHLAHGLFDEMRHKGLSPDRYTYSTLITSFAKDG 203

Query: 182  LFNDALSWLQKMDHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYN 361
            LF+ +L WLQ+M+ D V GDLVLYSNLI+L+RKLCDYSKAISIF+RLK S ITPDL+AYN
Sbjct: 204  LFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLCDYSKAISIFNRLKASAITPDLIAYN 263

Query: 362  SMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRET 541
            SMINV+GKAKLFREAR L+ EM    V PDTVSYSTLL +YV+N KF+EALS+F++M E 
Sbjct: 264  SMINVFGKAKLFREARLLLQEMADNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSQMNEA 323

Query: 542  NCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEA 721
             CPLDLT+CNIMIDVYGQL M K+AD+LFWSMRK+ I+PNVVSYNTLLRVYGDAELFGEA
Sbjct: 324  KCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMEIQPNVVSYNTLLRVYGDAELFGEA 383

Query: 722  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISI 901
            IHLFRLMQ KD+ QNVVTYNTMI IYGKT+EHEKA NL+QEM+ R IEPNAITYSTIISI
Sbjct: 384  IHLFRLMQSKDVPQNVVTYNTMINIYGKTLEHEKATNLVQEMKKRDIEPNAITYSTIISI 443

Query: 902  WGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR 1081
            W K GKLDRAA+LFQKLRSSG+ ID+VLYQTMIVAYERAGL+ HAKRLLHEL+RPDNIPR
Sbjct: 444  WEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPR 503

Query: 1082 ETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRK 1261
            ETAI ILA AGRIEEATWVFRQA + GE+K+I+VF  MINLFSK+KKY+NV+EVFE+MR+
Sbjct: 504  ETAIVILARAGRIEEATWVFRQAFDAGEVKDISVFGCMINLFSKNKKYSNVVEVFEKMRQ 563

Query: 1262 VGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEK 1441
            VG+FPDS VIALVLNA+ K++EFDKA+G+Y +M +EGCVF D VHFQM+S+YG R++F  
Sbjct: 564  VGYFPDSDVIALVLNAFGKLREFDKADGLYRQMHEEGCVFPDEVHFQMLSLYGARKDFMM 623

Query: 1442 VEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSDR 1579
            VE++FEKL  +PNVNKK+LHLVVA IY+RA+RLNDASR++N+ + +
Sbjct: 624  VESLFEKLDSNPNVNKKELHLVVASIYERADRLNDASRVMNKTNQK 669



 Score = 97.1 bits (240), Expect = 2e-17
 Identities = 75/332 (22%), Positives = 149/332 (44%), Gaps = 4/332 (1%)
 Frame = +2

Query: 599  DMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTY 778
            D  +    L W   K    P++ +YN +LR    A+ +  A  LF  M+ K +  +  TY
Sbjct: 133  DWQRTVALLDWINEKALYSPSLFAYNVVLRNVLRAKQWHLAHGLFDEMRHKGLSPDRYTY 192

Query: 779  NTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRS 958
            +T+I  + K    + +   +Q+M+   +  + + YS +I +  K+    +A  +F +L++
Sbjct: 193  STLITSFAKDGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLCDYSKAISIFNRLKA 252

Query: 959  SGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELR----RPDNIPRETAIHILAGAGRIEE 1126
            S I  D + Y +MI  + +A L   A+ LL E+     +PD +   T + I     +  E
Sbjct: 253  SAITPDLIAYNSMINVFGKAKLFREARLLLQEMADNAVQPDTVSYSTLLAIYVDNQKFVE 312

Query: 1127 ATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALVLN 1306
            A  +F Q  E     ++     MI+++ +         +F  MRK+   P+      +L 
Sbjct: 313  ALSLFSQMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMEIQPNVVSYNTLLR 372

Query: 1307 AYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPNVN 1486
             Y   + F +A  ++  MQ +        +  MI++YG   E EK   + +++ +     
Sbjct: 373  VYGDAELFGEAIHLFRLMQSKDVPQNVVTYNTMINIYGKTLEHEKATNLVQEMKKRDIEP 432

Query: 1487 KKDLHLVVAGIYDRANRLNDASRIINQMSDRG 1582
                +  +  I+++A +L+ A+ +  ++   G
Sbjct: 433  NAITYSTIISIWEKAGKLDRAAILFQKLRSSG 464


>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Glycine max]
          Length = 667

 Score =  800 bits (2065), Expect = 0.0
 Identities = 392/526 (74%), Positives = 460/526 (87%)
 Frame = +2

Query: 2    LRSTTLYANTDGEYNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEG 181
            +    LY  +   YNV+LRNVLRAKQW +AHGLFDEMR++ LSPDRYTYS LIT FGK G
Sbjct: 134  INDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHG 193

Query: 182  LFNDALSWLQKMDHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYN 361
            LF+ +L WLQ+M+ D V GDLVLYSNLI+L+RKL DYSKAISIFSRLK S ITPDL+AYN
Sbjct: 194  LFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYN 253

Query: 362  SMINVYGKAKLFREARSLIDEMRRAKVMPDTVSYSTLLTMYVENHKFLEALSIFAEMRET 541
            SMINV+GKAKLFREAR L+ EMR   V PDTVSYSTLL +YV+N KF+EALS+F+EM E 
Sbjct: 254  SMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEA 313

Query: 542  NCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEA 721
             CPLDLT+CNIMIDVYGQL M K+AD+LFWSMRK+GI+PNV+SYNTLLRVYG+A+LFGEA
Sbjct: 314  KCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEA 373

Query: 722  IHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMQSRGIEPNAITYSTIISI 901
            IHLFRLMQ KD++QNVVTYNTMI IYGKT+EHEKA NLIQEM  RGIEPNAITYSTIISI
Sbjct: 374  IHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISI 433

Query: 902  WGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDNIPR 1081
            W K GKLDRAA+LFQKLRSSG+ ID+VLYQTMIVAYER GL+ HAKRLLHEL+RPDNIPR
Sbjct: 434  WEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPR 493

Query: 1082 ETAIHILAGAGRIEEATWVFRQAAEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRK 1261
            +TAI ILA AGRIEEATWVFRQA +  E+K+I+VF  MINLFSK+KKYANV+EVFE+MR+
Sbjct: 494  DTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMRE 553

Query: 1262 VGFFPDSTVIALVLNAYSKMQEFDKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEK 1441
            VG+FPDS VIALVLNA+ K++EFDKA+ +Y +M +EGCVF D VHFQM+S+YG R++F  
Sbjct: 554  VGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVM 613

Query: 1442 VEAMFEKLLQDPNVNKKDLHLVVAGIYDRANRLNDASRIINQMSDR 1579
            VE++FEKL  +PN+NKK+LHLVVA IY+RA+RLNDASRI+N+M+ +
Sbjct: 614  VESLFEKLDSNPNINKKELHLVVASIYERADRLNDASRIMNRMNKK 659



 Score =  109 bits (273), Expect = 3e-21
 Identities = 96/415 (23%), Positives = 182/415 (43%), Gaps = 71/415 (17%)
 Frame = +2

Query: 41   YNVVLRNVLRAKQWEVAHGLFDEMRERALSPDRYTYSILITQFGKEGLFNDALSWLQKMD 220
            YN ++    +AK +  A  L  EMR+ A+ PD  +YS L+  +     F +ALS   +M+
Sbjct: 252  YNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMN 311

Query: 221  HDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFR 400
              + P DL   + +I++  +L    +A  +F  ++K GI P++++YN+++ VYG+A LF 
Sbjct: 312  EAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFG 371

Query: 401  EA-----------------------------------RSLIDEMRRAKVMPDTVSYSTLL 475
            EA                                    +LI EM +  + P+ ++YST++
Sbjct: 372  EAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTII 431

Query: 476  TMYVENHKFLEALSIFAEMRETNCPLDLTSCNIMIDVYGQLDMAKDADKLFWSMRKLGIE 655
            +++ +  K   A  +F ++R +   +D      MI  Y +  +   A +L   +++    
Sbjct: 432  SIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKR---- 487

Query: 656  PNVVSYNTLLRVYGDAELFGEAIHLFR----LMQRKDIE---------------QNVV-- 772
            P+ +  +T + +   A    EA  +FR      + KDI                 NVV  
Sbjct: 488  PDNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEV 547

Query: 773  --------------TYNTMIMIYGKTMEHEKANNLIQEMQSRG-IEPNAITYSTIISIWG 907
                              ++  +GK  E +KA+ L ++M   G + P+ + +  ++S++G
Sbjct: 548  FEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQ-MLSLYG 606

Query: 908  KVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLIGHAKRLLHELRRPDN 1072
                      LF+KL S+     + L+  +   YERA  +  A R+++ + +  N
Sbjct: 607  ARKDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLNDASRIMNRMNKKAN 661



 Score =  103 bits (257), Expect = 2e-19
 Identities = 77/324 (23%), Positives = 151/324 (46%), Gaps = 4/324 (1%)
 Frame = +2

Query: 623  LFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYG 802
            L W   K    P++ +YN LLR    A+ +  A  LF  M++K +  +  TY+T+I  +G
Sbjct: 131  LDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFG 190

Query: 803  KTMEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQV 982
            K    + +   +Q+M+   +  + + YS +I +  K+    +A  +F +L++S I  D +
Sbjct: 191  KHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLI 250

Query: 983  LYQTMIVAYERAGLIGHAKRLLHELR----RPDNIPRETAIHILAGAGRIEEATWVFRQA 1150
             Y +MI  + +A L   A+ LL E+R    +PD +   T + I     +  EA  +F + 
Sbjct: 251  AYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEM 310

Query: 1151 AEEGEIKEIAVFEKMINLFSKHKKYANVIEVFERMRKVGFFPDSTVIALVLNAYSKMQEF 1330
             E     ++     MI+++ +         +F  MRK+G  P+      +L  Y +   F
Sbjct: 311  NEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLF 370

Query: 1331 DKAEGVYTEMQDEGCVFFDGVHFQMISMYGWRREFEKVEAMFEKLLQDPNVNKKDLHLVV 1510
             +A  ++  MQ +        +  MI++YG   E EK   + +++ +         +  +
Sbjct: 371  GEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTI 430

Query: 1511 AGIYDRANRLNDASRIINQMSDRG 1582
              I+++A +L+ A+ +  ++   G
Sbjct: 431  ISIWEKAGKLDRAAILFQKLRSSG 454