BLASTX nr result

ID: Mentha29_contig00014743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00014743
         (216 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAO00120.1| D6-type cyclin [Populus trichocarpa]                   58   2e-06
ref|XP_007043433.1| D6-type cyclin [Theobroma cacao] gi|50870736...    57   3e-06
ref|XP_004293473.1| PREDICTED: putative cyclin-D6-1-like [Fragar...    57   3e-06
ref|XP_002326106.2| hypothetical protein POPTR_0019s14110g [Popu...    56   6e-06
gb|AEV41137.1| D6-type cyclin [Populus x canadensis]                   56   6e-06
ref|XP_002524706.1| cyclin d, putative [Ricinus communis] gi|223...    56   6e-06
emb|CAN88868.1| D6-type cyclin [Populus trichocarpa]                   56   6e-06

>emb|CAO00120.1| D6-type cyclin [Populus trichocarpa]
          Length = 156

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/71 (45%), Positives = 39/71 (54%)
 Frame = +3

Query: 3   RSINPFSFLNYFIPFFXXXXXXXLQLDIQALKNRATHIILKSQNDIKLLDFKPXXXXXXX 182
           RSI PFSF+++FI  F        Q    ALK RA+ II K+QNDI LL+FKP       
Sbjct: 26  RSITPFSFISFFISLFKPKDPPLRQ----ALKARASEIIFKAQNDINLLEFKPSLIAASA 81

Query: 183 XXXXXHQFFPM 215
                H+ FPM
Sbjct: 82  LLYASHELFPM 92


>ref|XP_007043433.1| D6-type cyclin [Theobroma cacao] gi|508707368|gb|EOX99264.1|
           D6-type cyclin [Theobroma cacao]
          Length = 288

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/71 (45%), Positives = 38/71 (53%)
 Frame = +3

Query: 3   RSINPFSFLNYFIPFFXXXXXXXLQLDIQALKNRATHIILKSQNDIKLLDFKPXXXXXXX 182
           RSI PFSF+++FI FF        Q    ALK RA  II KSQ D+KLL FKP       
Sbjct: 147 RSITPFSFISFFISFFKLKDPPLRQ----ALKARALEIIFKSQTDVKLLVFKPSITAASA 202

Query: 183 XXXXXHQFFPM 215
                H+ FP+
Sbjct: 203 LLSASHELFPL 213


>ref|XP_004293473.1| PREDICTED: putative cyclin-D6-1-like [Fragaria vesca subsp. vesca]
          Length = 322

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/71 (46%), Positives = 38/71 (53%)
 Frame = +3

Query: 3   RSINPFSFLNYFIPFFXXXXXXXLQLDIQALKNRATHIILKSQNDIKLLDFKPXXXXXXX 182
           RSI PFSF+ +FI  F        Q    ALK RAT II K+QND+KLL FKP       
Sbjct: 146 RSITPFSFILFFISLFKLEDPPLRQ----ALKARATQIIFKAQNDMKLLVFKPSIIAASG 201

Query: 183 XXXXXHQFFPM 215
                H+ FPM
Sbjct: 202 LLFASHELFPM 212


>ref|XP_002326106.2| hypothetical protein POPTR_0019s14110g [Populus trichocarpa]
           gi|550317529|gb|EEF00488.2| hypothetical protein
           POPTR_0019s14110g [Populus trichocarpa]
          Length = 324

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/71 (43%), Positives = 38/71 (53%)
 Frame = +3

Query: 3   RSINPFSFLNYFIPFFXXXXXXXLQLDIQALKNRATHIILKSQNDIKLLDFKPXXXXXXX 182
           RSI PFSF+++FI  F        Q    ALK RA  II K+QNDI LL+F+P       
Sbjct: 146 RSITPFSFISFFISLFKPKDPPLRQ----ALKARACEIIFKAQNDINLLEFRPSLTAASA 201

Query: 183 XXXXXHQFFPM 215
                H+ FPM
Sbjct: 202 LLYACHELFPM 212


>gb|AEV41137.1| D6-type cyclin [Populus x canadensis]
          Length = 324

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/71 (43%), Positives = 38/71 (53%)
 Frame = +3

Query: 3   RSINPFSFLNYFIPFFXXXXXXXLQLDIQALKNRATHIILKSQNDIKLLDFKPXXXXXXX 182
           RSI PFSF+++FI  F        Q    ALK RA  II K+QNDI LL+F+P       
Sbjct: 146 RSITPFSFISFFISLFKPKDPPLRQ----ALKARACEIIFKAQNDINLLEFRPSLTAASA 201

Query: 183 XXXXXHQFFPM 215
                H+ FPM
Sbjct: 202 LLYACHELFPM 212


>ref|XP_002524706.1| cyclin d, putative [Ricinus communis] gi|223536067|gb|EEF37725.1|
           cyclin d, putative [Ricinus communis]
          Length = 305

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/71 (42%), Positives = 40/71 (56%)
 Frame = +3

Query: 3   RSINPFSFLNYFIPFFXXXXXXXLQLDIQALKNRATHIILKSQNDIKLLDFKPXXXXXXX 182
           RSI PFSFL++FI  F        Q    ALK+RAT II K+ ++IKLL+F+P       
Sbjct: 148 RSITPFSFLHFFISLFELKDPPLTQ----ALKDRATEIIFKAHHEIKLLEFRPSVIAASA 203

Query: 183 XXXXXHQFFPM 215
                H+ FP+
Sbjct: 204 LLVASHELFPL 214


>emb|CAN88868.1| D6-type cyclin [Populus trichocarpa]
          Length = 324

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/71 (43%), Positives = 38/71 (53%)
 Frame = +3

Query: 3   RSINPFSFLNYFIPFFXXXXXXXLQLDIQALKNRATHIILKSQNDIKLLDFKPXXXXXXX 182
           RSI PFSF+++FI  F        Q    ALK RA  II K+QNDI LL+F+P       
Sbjct: 146 RSITPFSFISFFISLFKPKDPPLRQ----ALKARACEIIFKAQNDINLLEFRPSLTAASA 201

Query: 183 XXXXXHQFFPM 215
                H+ FPM
Sbjct: 202 LLYACHELFPM 212


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