BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00014161
         (1807 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Mimulus...   642   0.0  
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   635   e-179
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   633   e-179
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...   632   e-178
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   631   e-178
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   629   e-177
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   626   e-177
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   622   e-175
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]   622   e-175
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   621   e-175
gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]        620   e-175
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   620   e-175
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas...   619   e-174
ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mi...   618   e-174
ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mi...   616   e-174
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   612   e-172
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   607   e-171
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   602   e-169
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   599   e-168
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca...   599   e-168

>gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Mimulus guttatus]
          Length = 562

 Score =  642 bits (1655), Expect = 0.0
 Identities = 342/578 (59%), Positives = 409/578 (70%), Gaps = 51/578 (8%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDF 317
            KRQKMS++   D+EN + A  IPR PKYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGD 
Sbjct: 17   KRQKMSSSG-DDEENRDGAETIPRKPKYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDL 75

Query: 318  EEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLA 497
            EEAL+L+GAIPEEERGLH++++WARSARTDKGVSAVGQVVSGRFYVDPPGF+ERL+SHL+
Sbjct: 76   EEALYLSGAIPEEERGLHKRYEWARSARTDKGVSAVGQVVSGRFYVDPPGFIERLHSHLS 135

Query: 498  PQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCV 677
            PQIR+FGYKR TPSFNAKKFCDRRRY                                C+
Sbjct: 136  PQIRIFGYKRVTPSFNAKKFCDRRRY--------------------------------CL 163

Query: 678  ECSERGRKVFGVMGK-RSFESK----NANDSVETGSGISLNNGS-KLEENEVDNETEA-- 833
            ECSERGRKVFGVMGK R+FESK      N++VE GSGIS NNG+   E  +V    E   
Sbjct: 164  ECSERGRKVFGVMGKQRNFESKAPGEGENENVEVGSGISSNNGTGSFESKDVGENVEVGS 223

Query: 834  -----------NDSVKNSSIENG--------NVEAEAPKVEKLEEAKEA----------- 923
                       ++ V  +S+EN         NV   A + +K+E  K             
Sbjct: 224  GILSNNGSPPTDEKVVANSLENNEIGSNGSENVSIGAAQDDKMEVDKAVLVDSAILSDNV 283

Query: 924  -------SMGNFAEKGNDN------GSESKNLLENGAENVETMKEDILECDRASSPSKIE 1064
                   ++ + +EKG +N       SE++ LLE G E++E    D LE + A+  ++ E
Sbjct: 284  SVLDESKTVVDSSEKGIENTDLENGSSETEKLLETGDESIEKRNVDKLESENANGHTEAE 343

Query: 1065 KKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISFNAKTVLNLDGM 1244
            KKS+FCYGE EK R NRILK YEGTHNFHNFTTRTKAEDPAA+RYI+SFNA TV+N+DG+
Sbjct: 344  KKSEFCYGEEEKARFNRILKFYEGTHNFHNFTTRTKAEDPAARRYILSFNANTVVNVDGI 403

Query: 1245 DFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINVPMAPEVGLYLD 1424
            DF+KCEVVGQSFMLHQIRKMIGLAVA+MRN + ES +E AF Q V  NVPMAPEVGLYLD
Sbjct: 404  DFVKCEVVGQSFMLHQIRKMIGLAVAMMRNITPESKMETAFLQSVRFNVPMAPEVGLYLD 463

Query: 1425 ECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAVAVWLHSLNYRN 1604
            ECFFSSYN KWKDSHEE+SMKAYAEE+EEFKMKYIY H+A++E KDGAVA+WLHSLNYRN
Sbjct: 464  ECFFSSYNNKWKDSHEEVSMKAYAEESEEFKMKYIYPHVASSEHKDGAVALWLHSLNYRN 523

Query: 1605 YPDLRDADTTPMVTDDNKERENCPSSTTIVAEESKVVE 1718
            +PDLR AD+ P+   +  E  N  + + + A E+  ++
Sbjct: 524  FPDLRAADSEPVSDGNGTEIVNNCAGSDLKATETVSID 561


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
            Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  635 bits (1637), Expect = e-179
 Identities = 325/521 (62%), Positives = 383/521 (73%), Gaps = 5/521 (0%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDF 317
            KR KMSTTTTSDDE   +A    +  +YKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGD 
Sbjct: 28   KRLKMSTTTTSDDEETASATNGTKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDL 87

Query: 318  EEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLA 497
            EEALF +GA+PE++RG  +++DWARSARTDKGVSAVGQVVSGRFY+DPPG VERLN  L 
Sbjct: 88   EEALFHSGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNRILP 147

Query: 498  PQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCV 677
             QIR+FGYKR T SFN+KKFCDRRRYVYL+PVFALDPSCHRDRESV+AS GSGNELVKC+
Sbjct: 148  AQIRIFGYKRVTASFNSKKFCDRRRYVYLIPVFALDPSCHRDRESVLASLGSGNELVKCL 207

Query: 678  ECSERGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVKNSS 857
            ECSERGRKV GVMGKRSFE+K    S    S +S NNG                      
Sbjct: 208  ECSERGRKVAGVMGKRSFEAK----STIVHSDVSSNNG---------------------- 241

Query: 858  IENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDILECD 1037
             E+GNV  E     +LEE  ++S+ N                            +  E D
Sbjct: 242  -ESGNVIKEHNLTSELEEVTDSSVQN----------------------------EFTEVD 272

Query: 1038 RASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISFNA 1217
            + +      ++ +FCYGE EK   NRILK Y G+HNFHNFTTRTKAEDP+A+RYI+SF+A
Sbjct: 273  KVNVEKIPLEERRFCYGEEEKGLFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHA 332

Query: 1218 KTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINVPM 1397
             TV+N++G+DF+KCEVVGQSFMLHQIRKMIG+AVA+MRNC+ ESLIE A  + V+INVP 
Sbjct: 333  NTVVNVEGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRNCAPESLIETALRKDVSINVPT 392

Query: 1398 APEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAVAV 1577
            APEVGLYLDEC F+SYNQKWKDSHEELSMKAY EEAEEFKMK+IYSHIA+TER++G VA+
Sbjct: 393  APEVGLYLDECLFASYNQKWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEGVVAL 452

Query: 1578 WLHSLNYRNYPDLRDADT-----TPMVTDDNKERENCPSST 1685
            WLHSLN+RNYPDLR  +        +  DDN +  +  S++
Sbjct: 453  WLHSLNHRNYPDLRGCNVEMIEGMSLKVDDNTDNTDAKSAS 493


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus]
          Length = 519

 Score =  633 bits (1632), Expect = e-179
 Identities = 325/498 (65%), Positives = 396/498 (79%), Gaps = 1/498 (0%)
 Frame = +3

Query: 138  KRQKMS-TTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGD 314
            K+ KMS TTTTSDDE+  + +  P+  +YKRRKVAIFFAYCGVGYQGMQKNPGAKTIE D
Sbjct: 24   KKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEAD 83

Query: 315  FEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHL 494
             EEAL+LAGA+PE++RGL +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+RLNS+L
Sbjct: 84   LEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNL 143

Query: 495  APQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKC 674
            +PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDP+CHRDRESV AS GS NELVKC
Sbjct: 144  SPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKC 203

Query: 675  VECSERGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVKNS 854
            +ECSERGRKV G++GKR+FE K A     T S IS N  + +E ++V    +AN  +++S
Sbjct: 204  LECSERGRKVEGLIGKRNFEVKTA----ITESDISSNTVNAIEVSDV----QANGVLEDS 255

Query: 855  SIENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDILEC 1034
            +  + + +  +  VE    A E ++G+   +G    SES  +   G+++   + ++ +  
Sbjct: 256  ATTSDSNKQTSVLVE--NTATELNVGS---EGTAK-SESSEMSGLGSDSEIVVSKESVNG 309

Query: 1035 DRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISFN 1214
               SS S       F YGE EK R NRILK Y GTHNFHNFTTRTKAEDPAA+R+I+SF+
Sbjct: 310  KEKSSGS-------FKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFD 362

Query: 1215 AKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINVP 1394
            A  ++ ++G++F+KCEVVGQSFMLHQIRKM+GLAVAIMRNC+ ESLIEKA ++ VNINVP
Sbjct: 363  ASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVP 422

Query: 1395 MAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAVA 1574
             APEVGLYLDEC F+SYNQKWKD+HEE+SMKAY E AE+FKMK IYSHIA+TE KDGAVA
Sbjct: 423  TAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGAVA 482

Query: 1575 VWLHSLNYRNYPDLRDAD 1628
            +WLHSLN+RNYPDLR  D
Sbjct: 483  LWLHSLNHRNYPDLRVID 500


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  632 bits (1630), Expect = e-178
 Identities = 324/508 (63%), Positives = 387/508 (76%), Gaps = 11/508 (2%)
 Frame = +3

Query: 138  KRQKMS-TTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGD 314
            K+ KMS TTTTSDDE+  + +  P+  +YKRRKVAIFFAYCGVGYQGMQKNPGAKTIE D
Sbjct: 24   KKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEAD 83

Query: 315  FEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHL 494
             EEAL+LAGA+PE++RGL +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+RLNS+L
Sbjct: 84   LEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNL 143

Query: 495  APQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKC 674
            +PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDP+CHRDRESV AS GS NELVKC
Sbjct: 144  SPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKC 203

Query: 675  VECSERGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEV------DNETEAN 836
            +ECSERGRKV G+MGKR+FE K A     T S IS N  + +E ++V      ++    +
Sbjct: 204  LECSERGRKVEGLMGKRNFEVKTA----ITESDISSNIVNAIEVSDVQANGVLEDSATTS 259

Query: 837  DSVKNSSIENGNVEAE----APKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENV 1004
            DS K +S+   N   E    +  + K E ++ + +GN +E                    
Sbjct: 260  DSNKQTSVLVENTATELTVASEGIAKSESSEMSGLGNDSE-------------------- 299

Query: 1005 ETMKEDILECDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDP 1184
                   +   + S   K +    F YGE EK R NRILK Y GTHNFHNFTTRTKAEDP
Sbjct: 300  -------IVVSKESVNGKEKPSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDP 352

Query: 1185 AAKRYIISFNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKA 1364
            AA+R+I+SF+A T + ++G++F+KCEVVGQSFMLHQIRKM+GLAVAIMRNC+ ESLIEKA
Sbjct: 353  AARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKA 412

Query: 1365 FEQKVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIA 1544
             ++ VNINVP APEVGLYLDEC F+SYNQKWKD+HEE+SMKAY E AE+FKMK IYSHIA
Sbjct: 413  LQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSHIA 472

Query: 1545 ATERKDGAVAVWLHSLNYRNYPDLRDAD 1628
            +TE KDGAVA+WLHSLN+RNYPDLR  D
Sbjct: 473  STEHKDGAVALWLHSLNHRNYPDLRVID 500


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  631 bits (1627), Expect = e-178
 Identities = 324/498 (65%), Positives = 395/498 (79%), Gaps = 1/498 (0%)
 Frame = +3

Query: 138  KRQKMS-TTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGD 314
            K+ KMS TTTTSDDE+  + +  P+  +YKRRKVA FFAYCGVGYQGMQKNPGAKTIE D
Sbjct: 24   KKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAXFFAYCGVGYQGMQKNPGAKTIEAD 83

Query: 315  FEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHL 494
             EEAL+LAGA+PE++RGL +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+RLNS+L
Sbjct: 84   LEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNL 143

Query: 495  APQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKC 674
            +PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDP+CHRDRESV AS GS NELVKC
Sbjct: 144  SPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKC 203

Query: 675  VECSERGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVKNS 854
            +ECSERGRKV G++GKR+FE K A     T S IS N  + +E ++V    +AN  +++S
Sbjct: 204  LECSERGRKVEGLIGKRNFEVKTA----ITESDISSNTVNAIEVSDV----QANGVLEDS 255

Query: 855  SIENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDILEC 1034
            +  + + +  +  VE    A E ++G+   +G    SES  +   G+++   + ++ +  
Sbjct: 256  ATTSDSNKQTSVLVE--NTATELNVGS---EGTAK-SESSEMSGLGSDSEIVVSKESVNG 309

Query: 1035 DRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISFN 1214
               SS S       F YGE EK R NRILK Y GTHNFHNFTTRTKAEDPAA+R+I+SF+
Sbjct: 310  KEKSSGS-------FKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFD 362

Query: 1215 AKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINVP 1394
            A  ++ ++G++F+KCEVVGQSFMLHQIRKM+GLAVAIMRNC+ ESLIEKA ++ VNINVP
Sbjct: 363  ASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVP 422

Query: 1395 MAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAVA 1574
             APEVGLYLDEC F+SYNQKWKD+HEE+SMKAY E AE+FKMK IYSHIA+TE KDGAVA
Sbjct: 423  TAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGAVA 482

Query: 1575 VWLHSLNYRNYPDLRDAD 1628
            +WLHSLN+RNYPDLR  D
Sbjct: 483  LWLHSLNHRNYPDLRVID 500


>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
            vinifera]
          Length = 503

 Score =  629 bits (1623), Expect = e-177
 Identities = 322/511 (63%), Positives = 390/511 (76%), Gaps = 1/511 (0%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDF 317
            KR KMS TTT+ D+   +     + P+YKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGD 
Sbjct: 9    KRPKMSQTTTTSDDEDCDTTTATKKPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDL 68

Query: 318  EEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLA 497
            EEALF +GA+PE++RG  ++FDWARSARTDKGVSAVGQVVSGRFY+DPPG VERLNS+L 
Sbjct: 69   EEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLP 128

Query: 498  PQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCV 677
            PQIR+FG+KR T SFNAKKFCDRRRYVYL+PVFALDPS H DRESV+AS GS NELVKC+
Sbjct: 129  PQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESVLASVGSENELVKCL 188

Query: 678  ECSERGRKVFGVMGKRSFESKNANDSVETGSGISLN-NGSKLEENEVDNETEANDSVKNS 854
            ECSERGRKV G+MGKRSFESK + D  E   G S N  G+ + ++E   E+ A+   ++ 
Sbjct: 189  ECSERGRKVVGIMGKRSFESKVSVDDREDVEGESKNIVGAAILKSEAKEESMASSDNRH- 247

Query: 855  SIENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDILEC 1034
               +GN  ++  K  +  +  E S     E   D+ + ++N  E G  + E       + 
Sbjct: 248  ---DGNSISQPIKEGRCFQDNETS-----ESTPDSRASAQN--EPGVSHSE-------QS 290

Query: 1035 DRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISFN 1214
            D+    +K+EK S FCYG+ E+ER NRIL  Y GTHNFHNFTTR KAEDP+A+R+I+SF+
Sbjct: 291  DKGE--NKLEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFD 348

Query: 1215 AKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINVP 1394
              T++ ++G++F+KCEVVGQSFMLHQIRKMIGLAVAIMRN + ESL+E A  + VNINVP
Sbjct: 349  GNTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVP 408

Query: 1395 MAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAVA 1574
             APEVGLYLDECFFSSYN+KW+DSHEE+SMKAYAEEAEEFKMK++YSHIAATE K+G VA
Sbjct: 409  TAPEVGLYLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVA 468

Query: 1575 VWLHSLNYRNYPDLRDADTTPMVTDDNKERE 1667
            +WLHSLN+RNYPDL   D        N E E
Sbjct: 469  LWLHSLNHRNYPDLCIGDNGAASDGKNGEEE 499


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 548

 Score =  626 bits (1615), Expect = e-177
 Identities = 327/550 (59%), Positives = 399/550 (72%), Gaps = 11/550 (2%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDF 317
            K+ KMSTTT+ D+E            +YKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGD 
Sbjct: 27   KKLKMSTTTSDDEETGTKK-------RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDL 79

Query: 318  EEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLA 497
            EEAL+++GA+PE++RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPG V+RLNS+L 
Sbjct: 80   EEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLP 139

Query: 498  PQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCV 677
             QIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDPSCHRDRE+VMAS GSGNELVKC+
Sbjct: 140  SQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCL 199

Query: 678  ECSERGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVKNSS 857
            ECSERGRKV G++G R  +     ++V+  +GIS N  S + E+   + ++ +D+  N  
Sbjct: 200  ECSERGRKVVGLVGNR--KQNLELEAVDVEAGISSNRDSGVTEDVEVSLSKGDDNHLNEE 257

Query: 858  IENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDILECD 1037
              N N      K   LE           E+G     ES N              DILE +
Sbjct: 258  SGNDNKGGMNCKT-GLETVIPVQ-----EEGTPLNGESVN------------NSDILEEE 299

Query: 1038 RASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISFNA 1217
            + +   K    S+FCYGE E+ER N+ILK + GTHNFHNFTTRTKAEDPAA+RYIISFNA
Sbjct: 300  KVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNA 359

Query: 1218 KTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINVPM 1397
             T L ++G++F+KCEVVGQSFMLHQIRKMIGLAVAIMRNC+ ESLI++A +Q VNINVP 
Sbjct: 360  NTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPT 419

Query: 1398 APEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAVAV 1577
            APEVGLYLDECFF+SYNQKWKD HEELSMKAY +EA+EFKMKYIYSHIA+TE+K+G VA+
Sbjct: 420  APEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVAL 478

Query: 1578 WLHSLNYRNYPDLR-----------DADTTPMVTDDNKERENCPSSTTIVAEESKVVENC 1724
            WLHSLN+RNYPDLR            AD    +TD+        ++    A+  + + + 
Sbjct: 479  WLHSLNHRNYPDLRVINEEAIPNNKSADPKEAITDNKSADPEDATTKNKGADLKEAITDN 538

Query: 1725 PTSSPIIAEE 1754
             ++ P +  E
Sbjct: 539  KSADPEVVTE 548


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  622 bits (1605), Expect = e-175
 Identities = 325/546 (59%), Positives = 396/546 (72%), Gaps = 11/546 (2%)
 Frame = +3

Query: 150  MSTTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEAL 329
            MSTTT+ D+E            +YKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGD EEAL
Sbjct: 1    MSTTTSDDEETGTKK-------RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL 53

Query: 330  FLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLAPQIR 509
            +++GA+PE++RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPG V+RLNS+L  QIR
Sbjct: 54   YVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIR 113

Query: 510  VFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCVECSE 689
            +FGYKR T SFNAKKFCDRRRYVYL+PVFALDPSCHRDRE+VMAS GSGNELVKC+ECSE
Sbjct: 114  IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSE 173

Query: 690  RGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVKNSSIENG 869
            RGRKV G++G R  +     ++V+  +GIS N  S + E+   + ++ +D+  N    N 
Sbjct: 174  RGRKVVGLVGNR--KQNLELEAVDVEAGISSNRDSGVTEDVEVSLSKGDDNHLNEESGND 231

Query: 870  NVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDILECDRASS 1049
            N      K   LE           E+G     ES N              DILE ++ + 
Sbjct: 232  NKGGMNCKT-GLETVIPVQ-----EEGTPLNGESVN------------NSDILEEEKVNG 273

Query: 1050 PSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISFNAKTVL 1229
              K    S+FCYGE E+ER N+ILK + GTHNFHNFTTRTKAEDPAA+RYIISFNA T L
Sbjct: 274  EDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTL 333

Query: 1230 NLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINVPMAPEV 1409
             ++G++F+KCEVVGQSFMLHQIRKMIGLAVAIMRNC+ ESLI++A +Q VNINVP APEV
Sbjct: 334  VVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEV 393

Query: 1410 GLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAVAVWLHS 1589
            GLYLDECFF+SYNQKWKD HEELSMKAY +EA+EFKMKYIYSHIA+TE+K+G VA+WLHS
Sbjct: 394  GLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHS 452

Query: 1590 LNYRNYPDLR-----------DADTTPMVTDDNKERENCPSSTTIVAEESKVVENCPTSS 1736
            LN+RNYPDLR            AD    +TD+        ++    A+  + + +  ++ 
Sbjct: 453  LNHRNYPDLRVINEEAIPNNKSADPKEAITDNKSADPEDATTKNKGADLKEAITDNKSAD 512

Query: 1737 PIIAEE 1754
            P +  E
Sbjct: 513  PEVVTE 518


>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
          Length = 559

 Score =  622 bits (1603), Expect = e-175
 Identities = 331/555 (59%), Positives = 393/555 (70%), Gaps = 51/555 (9%)
 Frame = +3

Query: 156  TTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEALFL 335
            TTTTSDDE+ +      + P+YKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGD EEALF 
Sbjct: 4    TTTTSDDEDCDTTTATKK-PRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFF 62

Query: 336  AGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLAPQIRVF 515
            +GA+PE++RG  ++FDWARSARTDKGVSAVGQVVSGRFY+DPPG VERLNS+L PQIR+F
Sbjct: 63   SGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIF 122

Query: 516  GYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCVECSERG 695
            G+KR T SFNAKKFCDRRRYVYL+PVFALDPS H DRESV+AS GS NELVKC+ECSERG
Sbjct: 123  GFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESVLASVGSENELVKCLECSERG 182

Query: 696  RKVFGVMGKRSFESKNANDSVETGSGISLN---------------------------NGS 794
            RKV G+MGKRSFESK + D  E   G S N                           N +
Sbjct: 183  RKVVGIMGKRSFESKVSVDDREDVEGESKNIVQLGIPSNDEAAIVNSEVQEEIKATSNNN 242

Query: 795  KLEENEVDNETEANDSVKNSS------IENGNVEAEAPKVEKL---EEAKEASMGNFAEK 947
             ++ N   +ET   ++ K SS      I   N  +E  KV       EAKE SM + ++ 
Sbjct: 243  NIDANNSISETIKEEAAKLSSEVDAEIINGENSISEPVKVGAAILKSEAKEESMAS-SDN 301

Query: 948  GNDNGSESKNLLENGAENVETMKEDILECDRASSPS---------------KIEKKSQFC 1082
             +D  S S+ + E          E   +  RAS+ +               K+EK S FC
Sbjct: 302  RHDGNSISQPIKEGRCFQDNETSESTPD-SRASAQNEPGVSHSEQSDKGENKLEKGSGFC 360

Query: 1083 YGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISFNAKTVLNLDGMDFIKCE 1262
            YG+ E+ER NRIL  Y GTHNFHNFTTR KAEDP+A+R+I+SF+  T++ ++G++F+KCE
Sbjct: 361  YGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCE 420

Query: 1263 VVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINVPMAPEVGLYLDECFFSS 1442
            VVGQSFMLHQIRKMIGLAVAIMRN + ESL+E A  + VNINVP APEVGLYLDECFFSS
Sbjct: 421  VVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSS 480

Query: 1443 YNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAVAVWLHSLNYRNYPDLRD 1622
            YN+KW+DSHEE+SMKAYAEEAEEFKMK++YSHIAATE K+G VA+WLHSLN+RNYPDL  
Sbjct: 481  YNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDLCI 540

Query: 1623 ADTTPMVTDDNKERE 1667
             D        N E E
Sbjct: 541  GDNGAASDGKNGEEE 555


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|593783723|ref|XP_007154902.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028254|gb|ESW26894.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  621 bits (1602), Expect = e-175
 Identities = 324/536 (60%), Positives = 390/536 (72%), Gaps = 10/536 (1%)
 Frame = +3

Query: 144  QKMSTTTTSDDENPENAALIPRAPK-YKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFE 320
            +K+  +TTSDDE    A   P A K YKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGD E
Sbjct: 27   KKLKMSTTSDDEECTTA---PGAKKRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLE 83

Query: 321  EALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLAP 500
            EAL+++GA+PE +RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPG V+RLNS+L  
Sbjct: 84   EALYVSGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHS 143

Query: 501  QIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCVE 680
            QIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDP CHRDRE+VMAS GS NELVKC+E
Sbjct: 144  QIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVMASLGSTNELVKCLE 203

Query: 681  CSERGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVKNSSI 860
            CSERGRKV G++G R                    +  +LE  +V+    +N  V   S+
Sbjct: 204  CSERGRKVVGLVGNRK-------------------HNLELEAMDVEAGISSNTDVVLDSV 244

Query: 861  ENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAE--------NVETMK 1016
              G+VEA   K +      E+ + N  +   D G+  K  +E G          N E++ 
Sbjct: 245  VTGDVEASLSKGDDNHLNGESGIDNKGKVLVD-GTNLKTGIEKGIPVQDEVMPLNGESVN 303

Query: 1017 E-DILECDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAK 1193
              DI+E ++ +   K    S FCYGE E+ER N+IL  + GTHNFHNFTTRTKAEDPAA+
Sbjct: 304  NSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTHNFHNFTTRTKAEDPAAR 363

Query: 1194 RYIISFNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQ 1373
            RYIISFNA T   ++G++F+KCEVVGQSFMLHQIRKM+GLAVAIMRNC+ ESLI KA +Q
Sbjct: 364  RYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKALQQ 423

Query: 1374 KVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATE 1553
             VNINVP APEVGLYLDECFFSSYNQKWKDSHEELSMKAY +EAEEFKMKYIYSHI+ TE
Sbjct: 424  DVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEEFKMKYIYSHISFTE 483

Query: 1554 RKDGAVAVWLHSLNYRNYPDLRDADTTPMVTDDNKERENCPSSTTIVAEESKVVEN 1721
            +K+G VA+WLHSLN+RNYPDLR  +    +TD+         S    A+  ++ +N
Sbjct: 484  QKEGTVALWLHSLNHRNYPDLRVVN-EEAITDNKSADPEQAISDRKSADPEEITDN 538


>gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 621

 Score =  620 bits (1599), Expect = e-175
 Identities = 338/595 (56%), Positives = 406/595 (68%), Gaps = 84/595 (14%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDF 317
            K+ KMST+TTSDDE  E      +  +YKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGD 
Sbjct: 26   KKLKMSTSTTSDDE--EMTTGNAKKERYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDL 83

Query: 318  EEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLA 497
            EEAL+L+GA+PE++R   +++DWARSARTDKGVSAVGQVVSGRFY+DPPG VERLNS L+
Sbjct: 84   EEALYLSGAVPEQDRYCPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSKLS 143

Query: 498  PQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCV 677
            PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDPS H +RESV+AS GS +ELVKCV
Sbjct: 144  PQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPNRESVLASLGSESELVKCV 203

Query: 678  ECSERGRKVFGVMGKRSFESKNAN--------------DSVETGSGI--SLNNGSKLEEN 809
            ECSERGRKV G+MGKRS+E   A+              DSV +   +  S+N+  +++  
Sbjct: 204  ECSERGRKVPGLMGKRSYELTGASFDSGISLNICDAKVDSVVSDENVVASINDIGEVKVE 263

Query: 810  EVDNETE--ANDS--------VKNSSIENGNVEAEAP-------------KVEKL--EEA 914
              D+ET   + DS         K  S+ENG+ E                 KV+ +  EE 
Sbjct: 264  NGDSETNHASFDSGISSNICDAKVDSVENGDSETNRASFDLGISSNICDAKVDSVVTEEN 323

Query: 915  KEASMGNFAEKGNDNGSESKNLL---------------------ENGAENVE-------- 1007
            + AS+    E   +NG    N                       ENG  +V         
Sbjct: 324  RVASVNGVGEVKVENGDSETNRASFNSGISSNICDTKVVSVVRDENGVASVNGDGEVKVE 383

Query: 1008 ------------TMKEDIL--ECDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHN 1145
                        T+  ++   E    +   K EK+S F YGE E+ER NRILK YEGTHN
Sbjct: 384  NGDSETNQVEGRTLDNEVSTGEEGNVNGEQKPEKRSDFSYGEKERERFNRILKHYEGTHN 443

Query: 1146 FHNFTTRTKAEDPAAKRYIISFNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAI 1325
            FHNFTTRTKAEDPAA+R+IISFNA TV+ ++GM+F+KCEVVGQSFMLHQIRKMIGLAVAI
Sbjct: 444  FHNFTTRTKAEDPAAQRFIISFNANTVIPVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAI 503

Query: 1326 MRNCSSESLIEKAFEQKVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEA 1505
            MRNC  ESL+E A ++ VNIN+P APEVGLYLDEC FSSYN+KWKDSHEE+SMKAYAEEA
Sbjct: 504  MRNCVPESLMENALQKDVNINIPTAPEVGLYLDECLFSSYNKKWKDSHEEMSMKAYAEEA 563

Query: 1506 EEFKMKYIYSHIAATERKDGAVAVWLHSLNYRNYPDLRDADTTPMVTDDNKEREN 1670
            EEFKMK+IYSHI  TE+K+G VA+WLHSLNYRNYPD +  D      +++ + EN
Sbjct: 564  EEFKMKHIYSHIGLTEQKEGVVALWLHSLNYRNYPDFQAVDNKNTTNNNSTDVEN 618


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 584

 Score =  620 bits (1599), Expect = e-175
 Identities = 325/571 (56%), Positives = 410/571 (71%), Gaps = 25/571 (4%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDE----NPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTI 305
            KR +MSTTT+ ++E     P + A   +  +YKRRK+AIFFAYCGVGYQGMQKNPGAKTI
Sbjct: 20   KRPRMSTTTSDEEEIATTAPGDEAATVKKQRYKRRKMAIFFAYCGVGYQGMQKNPGAKTI 79

Query: 306  EGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLN 485
            EGD EEALF +GA+PE++RG  +++DWARSARTDKGVSAVGQV+SGRFYVDPPG V+RLN
Sbjct: 80   EGDLEEALFHSGAVPEQDRGCPKRYDWARSARTDKGVSAVGQVISGRFYVDPPGLVDRLN 139

Query: 486  SHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNEL 665
            S L  QIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDPS HRDRESV+AS GSG+EL
Sbjct: 140  SILPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHRDRESVLASLGSGDEL 199

Query: 666  VKCVECSERGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEV--------DN 821
            VKC+ECSERGRKV G +GKRSFESK  +++ +T   I LN G  +   E+        DN
Sbjct: 200  VKCLECSERGRKVIGAVGKRSFESK--SEAFQT--DILLNGGCAIANCEIKEDISMSMDN 255

Query: 822  ------ETEANDSVKNSSIENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLL 983
                   +E  +    S  E+   E+  P+ + L  +++ ++   ++   +    S++  
Sbjct: 256  AHGVRMHSEFVEQTNVSHNEDSETESAMPRTDILSNSEDGNVK--SDSKQEEVMVSEDAA 313

Query: 984  ENGAENVETMKEDILEC---DRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHN 1154
            + G +  ETM++D       +R +    + K S+FCYGE EKE+ NRILK Y G+HNFHN
Sbjct: 314  DGGNKESETMEKDSKASVGEERVNGEEHVMKGSEFCYGEEEKEKFNRILKYYVGSHNFHN 373

Query: 1155 FTTRTKAEDPAAKRYIISFNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRN 1334
            FTTRTKAEDP+A+RYIISF+A+T + ++G++F+KCEV+GQSFMLHQIRKMIGLAVAIMRN
Sbjct: 374  FTTRTKAEDPSAQRYIISFDARTTVTVEGIEFVKCEVIGQSFMLHQIRKMIGLAVAIMRN 433

Query: 1335 CSSESLIEKAFEQKVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEF 1514
            C+ ESLI  A ++ V INVP APEVGLYLDECFF+SYNQKWKD HEEL MK Y E AE+F
Sbjct: 434  CAPESLISTALQKDVKINVPTAPEVGLYLDECFFTSYNQKWKD-HEELCMKDYEEVAEDF 492

Query: 1515 KMKYIYSHIAATERKDGAVAVWLHSLNYRNYPDLRDADTTPMVTDDNKERENCPSSTTIV 1694
            KMKYIYSHIA+TE+K+G V +WLHSLNYRNYPDLR   T     + + E  N   + +  
Sbjct: 493  KMKYIYSHIASTEQKEGVVGLWLHSLNYRNYPDLRFCYTLDANNEKSTEVVNNGDANSEE 552

Query: 1695 AEESKVVENCPTSS----PIIAEESRTVEVH 1775
            + + K  E+           + +ESR +  H
Sbjct: 553  SAQEKNSEDADVEKNGKVENMVQESRALISH 583


>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028255|gb|ESW26895.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  619 bits (1595), Expect = e-174
 Identities = 323/531 (60%), Positives = 387/531 (72%), Gaps = 10/531 (1%)
 Frame = +3

Query: 159  TTTSDDENPENAALIPRAPK-YKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEALFL 335
            +TTSDDE    A   P A K YKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGD EEAL++
Sbjct: 2    STTSDDEECTTA---PGAKKRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYV 58

Query: 336  AGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLAPQIRVF 515
            +GA+PE +RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPG V+RLNS+L  QIR+F
Sbjct: 59   SGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIF 118

Query: 516  GYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCVECSERG 695
            GYKR T SFNAKKFCDRRRYVYL+PVFALDP CHRDRE+VMAS GS NELVKC+ECSERG
Sbjct: 119  GYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERG 178

Query: 696  RKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVKNSSIENGNV 875
            RKV G++G R                    +  +LE  +V+    +N  V   S+  G+V
Sbjct: 179  RKVVGLVGNRK-------------------HNLELEAMDVEAGISSNTDVVLDSVVTGDV 219

Query: 876  EAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAE--------NVETMKE-DIL 1028
            EA   K +      E+ + N  +   D G+  K  +E G          N E++   DI+
Sbjct: 220  EASLSKGDDNHLNGESGIDNKGKVLVD-GTNLKTGIEKGIPVQDEVMPLNGESVNNSDII 278

Query: 1029 ECDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIIS 1208
            E ++ +   K    S FCYGE E+ER N+IL  + GTHNFHNFTTRTKAEDPAA+RYIIS
Sbjct: 279  EEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTHNFHNFTTRTKAEDPAARRYIIS 338

Query: 1209 FNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNIN 1388
            FNA T   ++G++F+KCEVVGQSFMLHQIRKM+GLAVAIMRNC+ ESLI KA +Q VNIN
Sbjct: 339  FNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKALQQDVNIN 398

Query: 1389 VPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGA 1568
            VP APEVGLYLDECFFSSYNQKWKDSHEELSMKAY +EAEEFKMKYIYSHI+ TE+K+G 
Sbjct: 399  VPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEEFKMKYIYSHISFTEQKEGT 458

Query: 1569 VAVWLHSLNYRNYPDLRDADTTPMVTDDNKERENCPSSTTIVAEESKVVEN 1721
            VA+WLHSLN+RNYPDLR  +    +TD+         S    A+  ++ +N
Sbjct: 459  VALWLHSLNHRNYPDLRVVN-EEAITDNKSADPEQAISDRKSADPEEITDN 508


>ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Solanum
            tuberosum]
          Length = 569

 Score =  618 bits (1594), Expect = e-174
 Identities = 322/501 (64%), Positives = 372/501 (74%), Gaps = 4/501 (0%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDEN----PENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTI 305
            K+ KMSTTTTSDDE       + +   R P+YKRRKVAIFFAYCGVGYQGMQKNPGAKTI
Sbjct: 17   KKLKMSTTTTSDDEEYAAGAGDGSAPERKPRYKRRKVAIFFAYCGVGYQGMQKNPGAKTI 76

Query: 306  EGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLN 485
            EGD EEAL+ AG +P+ ++   RK++WARSARTDKGVSAVGQVVSGRFYVDPPGF++RLN
Sbjct: 77   EGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLN 136

Query: 486  SHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNEL 665
            S L PQIR+FG+KR T +F+AKKFCD+RRYVYLVPVFALDP  HRDRESV+AS GSG EL
Sbjct: 137  SILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDPYAHRDRESVLASLGSGKEL 196

Query: 666  VKCVECSERGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSV 845
             KC+ C ERGRKV GVMG+R F+    +  +     ++ N          D  T+ N  +
Sbjct: 197  AKCLNCPERGRKVVGVMGRRVFDPITQSVIIVDAPVVNAN----------DPTTDTNMVI 246

Query: 846  KNSSIENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDI 1025
            +N          EA   EK+EE               NG      +E   EN + M+E +
Sbjct: 247  EN----------EASLSEKVEER--------------NGE-----VEGSNENAK-MEEQV 276

Query: 1026 LECDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYII 1205
             E             S FCYGE EKER NRILK YEGTHNFHNFTTRTKA+DPAAKRYII
Sbjct: 277  EE-------------SVFCYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYII 323

Query: 1206 SFNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNI 1385
            SFNA TV+N+DG+DF+KCEVVGQSFMLHQIRKMIGLAVAIMRNC+ ESLI  AF + VNI
Sbjct: 324  SFNANTVVNVDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIVTAFRRDVNI 383

Query: 1386 NVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDG 1565
            NVPMAPEVGLYLDECFF+SYN KWKD+HEE+S+KAY EEAEEFKMKYIYSHIA+TE+K+G
Sbjct: 384  NVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYLEEAEEFKMKYIYSHIASTEQKEG 443

Query: 1566 AVAVWLHSLNYRNYPDLRDAD 1628
             +AVWLHSLN+RNYPDLR  D
Sbjct: 444  TMAVWLHSLNHRNYPDLRAVD 464


>ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Solanum
            lycopersicum]
          Length = 598

 Score =  616 bits (1589), Expect = e-174
 Identities = 318/500 (63%), Positives = 375/500 (75%), Gaps = 3/500 (0%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENA---ALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIE 308
            K+QKMSTTTTSD+E    A   +   R P+YKRRKVAIFFAYCGVGYQGMQKNPGAKTIE
Sbjct: 17   KKQKMSTTTTSDEEYAAGAGDGSAPERKPRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIE 76

Query: 309  GDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNS 488
            GD EEAL+ AG +P+ ++   RK++WARSARTDKGVSAVGQVVSGRFYVDPPGF++RLNS
Sbjct: 77   GDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNS 136

Query: 489  HLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELV 668
             L PQIR+FG+KR T +F+AKKFCD+RRYVYLVPVFALDP  HRDRESV+AS GSG ELV
Sbjct: 137  ILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDPYAHRDRESVLASLGSGKELV 196

Query: 669  KCVECSERGRKVFGVMGKRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVK 848
            KC+ C ERGRKV GVMG+R F+    +  +     ++ N          D  T+ N  ++
Sbjct: 197  KCLNCPERGRKVAGVMGRRVFDPITQSVIIVDAPVVTAN----------DPTTDTNMIIE 246

Query: 849  NSSIENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDIL 1028
            N          EA   EK+EE  +                   ++E   EN +  KE+ +
Sbjct: 247  N----------EASLSEKVEERID-------------------VVERSDENAK--KEEQV 275

Query: 1029 ECDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIIS 1208
            E            +S FCYGE EKER NRILK +EGTHNFHNFTTRTKA+DPAAKR+IIS
Sbjct: 276  E------------ESVFCYGEKEKERFNRILKYFEGTHNFHNFTTRTKADDPAAKRFIIS 323

Query: 1209 FNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNIN 1388
            FNA TV+N+DG+DF+KCEV+GQSFMLHQIRKMIGLAVAIMRNC+ ESLI  AF + VNIN
Sbjct: 324  FNANTVVNVDGIDFVKCEVIGQSFMLHQIRKMIGLAVAIMRNCAPESLIVTAFRRDVNIN 383

Query: 1389 VPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGA 1568
            VPMAPEVGLYLDECFF+SYN KWKD+HEE+S+KAY EEAEEFK+KYIYSHIA+TE+K+G 
Sbjct: 384  VPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYLEEAEEFKVKYIYSHIASTEQKEGT 443

Query: 1569 VAVWLHSLNYRNYPDLRDAD 1628
            +AVWLHSLN+RNYPDLR  D
Sbjct: 444  MAVWLHSLNHRNYPDLRAVD 463


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  612 bits (1578), Expect = e-172
 Identities = 323/512 (63%), Positives = 380/512 (74%), Gaps = 18/512 (3%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENAALIPRAPKY---------KRRKVAIFFAYCGVGYQGMQKNP 290
            KR KMS T+TSDDE      LIP A            KRRK+AIFFAYCGVGYQGMQKNP
Sbjct: 25   KRLKMSATSTSDDERD----LIPAAAGADSTTKRQLCKRRKIAIFFAYCGVGYQGMQKNP 80

Query: 291  GAKTIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGF 470
            GAKTIEGD EEALF +GA+ E +RG  R++DWARSARTDKGVSAVGQVVSGRF +DPPG 
Sbjct: 81   GAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSAVGQVVSGRFCIDPPGL 140

Query: 471  VERLNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAG 650
            VERLNS+L  QIR+FGYKR T SFNAKKFCD+RRYVYL+PVFALD S HRDRESVMAS G
Sbjct: 141  VERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRDRESVMASLG 200

Query: 651  SGNELVKCVECSERGRKVFGVMGKRSF--------ESKNANDSVETGSGISLNNGSKLEE 806
            SGNELVKC+ECSERGRKV GVMGKR++        E+ + N  V+  + +S  NG +   
Sbjct: 201  SGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVSTCNGDRHNT 260

Query: 807  NEVDNETEANDSVKNS-SIENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLL 983
            N      E+N ++  S  +EN N E+     E L E++ +         N+N   S +L 
Sbjct: 261  NL--ESVESNKTISESVMVENANSESVN---ETLVESRTSETVQ-----NENTDLSLDLD 310

Query: 984  ENGAENVETMKEDILECDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTT 1163
                  V   +  +      +   K+ K S FCYGE EK+R NRILK Y G+HNFHNFTT
Sbjct: 311  SKNDSKVMAEERSV------NGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFHNFTT 364

Query: 1164 RTKAEDPAAKRYIISFNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSS 1343
            RTKAEDP+A+RYIISF A +V+N++G+DF+KCEVVGQSFMLHQIRKMIGLAVA++RNC+ 
Sbjct: 365  RTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAP 424

Query: 1344 ESLIEKAFEQKVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMK 1523
            ESLIE A ++ VNINVP APEVGLYLDEC F+SYN+KWKDSHEELSMKAY EEAE FKMK
Sbjct: 425  ESLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMK 484

Query: 1524 YIYSHIAATERKDGAVAVWLHSLNYRNYPDLR 1619
            +I+SHIA TE+K+G VA+WLHSLNYRNYPDLR
Sbjct: 485  HIFSHIARTEQKEGVVALWLHSLNYRNYPDLR 516


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Citrus
            sinensis]
          Length = 526

 Score =  607 bits (1566), Expect = e-171
 Identities = 320/511 (62%), Positives = 378/511 (73%), Gaps = 18/511 (3%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENAALIPRAPKY---------KRRKVAIFFAYCGVGYQGMQKNP 290
            KR KMS TTTSDDE      LIP A            KRRK+AIFFAYCGVGYQGMQKNP
Sbjct: 25   KRLKMSATTTSDDERD----LIPAAAGADSTTKRQLCKRRKIAIFFAYCGVGYQGMQKNP 80

Query: 291  GAKTIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGF 470
            GAKTIEGD EEALF +GA+ E +RG  R++DWARSARTDKGVSAVGQVVSGRF +DPPG 
Sbjct: 81   GAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSAVGQVVSGRFCIDPPGL 140

Query: 471  VERLNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAG 650
            VERLN +L  QIR+FGYKR T SFNAKKFCD+RRYVYL+PVFALD S HRDRESVMAS G
Sbjct: 141  VERLNYNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRDRESVMASLG 200

Query: 651  SGNELVKCVECSERGRKVFGVMGKRSF--------ESKNANDSVETGSGISLNNGSKLEE 806
            SGNELVKC+ECSERGRKV GVMGKR++        E+ + N  V+  + +S  NG +   
Sbjct: 201  SGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVSTCNGDRHNT 260

Query: 807  NEVDNETEANDSVKNSS-IENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLL 983
            N      E+N ++  S+ +EN N E+     E L E++ +         N+N   S +L 
Sbjct: 261  NL--ESVESNKTISESAMVENANSESVN---ETLVESRTSETVQ-----NENTDLSLDLD 310

Query: 984  ENGAENVETMKEDILECDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTT 1163
                  V   +  +      +   K+ K S FCYGE EK+R NRILK Y G+HNFHNFTT
Sbjct: 311  SKNDSKVMAEERSV------NGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFHNFTT 364

Query: 1164 RTKAEDPAAKRYIISFNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSS 1343
            RTKAEDP+A+RYIISF A +V+N++G+DF+KCEVVGQSFMLHQIRKMIGLAVA++RNC+ 
Sbjct: 365  RTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAP 424

Query: 1344 ESLIEKAFEQKVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMK 1523
            +SLIE A ++ VNINVP APEVGLYLDEC F+SYN+KWKDSHEELSMKAY EEAE FKMK
Sbjct: 425  QSLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMK 484

Query: 1524 YIYSHIAATERKDGAVAVWLHSLNYRNYPDL 1616
            +I+SHI  TE+K+G VA+WLHSLNYRNYPDL
Sbjct: 485  HIFSHITRTEQKEGVVALWLHSLNYRNYPDL 515


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Cicer arietinum]
          Length = 505

 Score =  602 bits (1551), Expect = e-169
 Identities = 306/512 (59%), Positives = 379/512 (74%), Gaps = 2/512 (0%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDF 317
            K+ KMSTTT+ D+E    A    R   YKRRKVAI FAYCGVGYQGMQKNPGAKTIEG+ 
Sbjct: 27   KKAKMSTTTSDDEECTAAAGTKVR---YKRRKVAILFAYCGVGYQGMQKNPGAKTIEGEI 83

Query: 318  EEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLA 497
            EEAL+++GA+PE++RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+RLNS+L 
Sbjct: 84   EEALYVSGAVPEQDRGMSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLP 143

Query: 498  PQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCV 677
             QIR+FGYKR T SF+AKKFCDRRRYVYL+PVFALDP CHRDRE+V+AS GS NELVKC+
Sbjct: 144  SQIRIFGYKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELVKCL 203

Query: 678  ECSERGRKVFGVMG--KRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVKN 851
            ECSERGRKV G++G  KR+ E + A D   T  G          ++   N+   ND+   
Sbjct: 204  ECSERGRKVEGLVGNSKRNLELE-AMDVETTDKG----------DDNRSNKESINDNEGK 252

Query: 852  SSIENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDILE 1031
             S+E+ N +     V                    +G +  + L  G+EN       +LE
Sbjct: 253  VSVEDVNSKTSFETVV-------------------SGQDEVSPLNGGSEN----NSAVLE 289

Query: 1032 CDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISF 1211
             ++ +      K+S+FCYGE E+ER N+ILKSY GTHNFHNFTTR K EDP+AKR+IISF
Sbjct: 290  EEKVNGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISF 349

Query: 1212 NAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINV 1391
            +A   + ++GM+F+KCE+VGQSFMLHQIRKM+GLAVAIMRNC+ ESLIEKA +  V+I V
Sbjct: 350  DASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITV 409

Query: 1392 PMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAV 1571
            P APEVGLYLDECFF+SYNQKWKD+HEE+SMKAY +EAE+FKMK+IYSHIA+TE+K+G V
Sbjct: 410  PTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEGTV 469

Query: 1572 AVWLHSLNYRNYPDLRDADTTPMVTDDNKERE 1667
             +WLHSLN+RNY DLR  +   +  +   E E
Sbjct: 470  GLWLHSLNHRNYSDLRVVEEEGVANEKKSEIE 501


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Cicer arietinum]
          Length = 475

 Score =  599 bits (1544), Expect = e-168
 Identities = 304/506 (60%), Positives = 376/506 (74%), Gaps = 2/506 (0%)
 Frame = +3

Query: 156  TTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEALFL 335
            +TTTSDDE  E  A      +YKRRKVAI FAYCGVGYQGMQKNPGAKTIEG+ EEAL++
Sbjct: 2    STTTSDDE--ECTAAAGTKVRYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYV 59

Query: 336  AGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLAPQIRVF 515
            +GA+PE++RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+RLNS+L  QIR+F
Sbjct: 60   SGAVPEQDRGMSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIF 119

Query: 516  GYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCVECSERG 695
            GYKR T SF+AKKFCDRRRYVYL+PVFALDP CHRDRE+V+AS GS NELVKC+ECSERG
Sbjct: 120  GYKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLECSERG 179

Query: 696  RKVFGVMG--KRSFESKNANDSVETGSGISLNNGSKLEENEVDNETEANDSVKNSSIENG 869
            RKV G++G  KR+ E + A D   T  G          ++   N+   ND+    S+E+ 
Sbjct: 180  RKVEGLVGNSKRNLELE-AMDVETTDKG----------DDNRSNKESINDNEGKVSVEDV 228

Query: 870  NVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENGAENVETMKEDILECDRASS 1049
            N +     V                    +G +  + L  G+EN       +LE ++ + 
Sbjct: 229  NSKTSFETVV-------------------SGQDEVSPLNGGSEN----NSAVLEEEKVNG 265

Query: 1050 PSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTKAEDPAAKRYIISFNAKTVL 1229
                 K+S+FCYGE E+ER N+ILKSY GTHNFHNFTTR K EDP+AKR+IISF+A   +
Sbjct: 266  EDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISFDASNTV 325

Query: 1230 NLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESLIEKAFEQKVNINVPMAPEV 1409
             ++GM+F+KCE+VGQSFMLHQIRKM+GLAVAIMRNC+ ESLIEKA +  V+I VP APEV
Sbjct: 326  VIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITVPTAPEV 385

Query: 1410 GLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYSHIAATERKDGAVAVWLHS 1589
            GLYLDECFF+SYNQKWKD+HEE+SMKAY +EAE+FKMK+IYSHIA+TE+K+G V +WLHS
Sbjct: 386  GLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEGTVGLWLHS 445

Query: 1590 LNYRNYPDLRDADTTPMVTDDNKERE 1667
            LN+RNY DLR  +   +  +   E E
Sbjct: 446  LNHRNYSDLRVVEEEGVANEKKSEIE 471


>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
            gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
            [Medicago truncatula]
          Length = 530

 Score =  599 bits (1544), Expect = e-168
 Identities = 318/533 (59%), Positives = 386/533 (72%), Gaps = 15/533 (2%)
 Frame = +3

Query: 138  KRQKMSTTTTSDDENPENAALIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDF 317
            K+ KMSTTT SDDE    A       +YKRRKVAIFFAYCGVGYQGMQKNPGAKTIEG+ 
Sbjct: 27   KKVKMSTTT-SDDEGCTTAE--GSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGEL 83

Query: 318  EEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLA 497
            EEAL+++GA+PE++RGL +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+RLNS+L 
Sbjct: 84   EEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLP 143

Query: 498  PQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCV 677
             QIR+FG+KR T SF+AKKFCDRRRYVYL+PVFALDP CHRDRE+V+AS GS NELVKC+
Sbjct: 144  SQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELVKCL 203

Query: 678  ECSERGRKVFGVMG--KRSFE---------SKNANDSVETGSG----ISLNNGSKLEENE 812
             CSERGRKV GV+G  KR+ E         S N ND V++G      +SL+ G   ++N 
Sbjct: 204  PCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKNDVVDSGVTKDVEVSLSKG---DDNH 260

Query: 813  VDNETEANDSVKNSSIENGNVEAEAPKVEKLEEAKEASMGNFAEKGNDNGSESKNLLENG 992
            ++ E+  ND+    S+E  N      K    +E + A +         NG    NL    
Sbjct: 261  LNKES-INDNEGKVSVEEVN-----SKTVVSDEDEVAPI---------NGGSENNL---- 301

Query: 993  AENVETMKEDILECDRASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFHNFTTRTK 1172
                      ILE ++ +        S FCYGE E+ER N ILK Y GTHNFHNFTTR K
Sbjct: 302  ---------GILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIK 352

Query: 1173 AEDPAAKRYIISFNAKTVLNLDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNCSSESL 1352
             EDP+AKR+IISF+A T + ++GM+F+KCE+VGQSFMLHQIRKM+GLAVAIMRNC+ ESL
Sbjct: 353  PEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESL 412

Query: 1353 IEKAFEQKVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYAEEAEEFKMKYIY 1532
            IEKA ++ V+I VP APEVGLYLDECFF+SYNQKWKD+HEE+SMKAY +EAE+FKM+YIY
Sbjct: 413  IEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIY 472

Query: 1533 SHIAATERKDGAVAVWLHSLNYRNYPDLRDADTTPMVTDDNKERENCPSSTTI 1691
             HIA+TE K+G V +WLHSLN+RNYPDLR  D   +  D   E +     T I
Sbjct: 473  PHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGVTNDKKVEVDMNDKKTEI 525