BLASTX nr result
ID: Mentha29_contig00014077
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00014077
(652 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus... 105 9e-21
gb|EPS73770.1| hypothetical protein M569_00985 [Genlisea aurea] 90 5e-16
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar... 85 2e-14
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps... 84 5e-14
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana] 82 1e-13
ref|XP_004978029.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_007039692.1| COP9 signalosome, subunit CSN8 isoform 1 [Th... 69 2e-13
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein... 81 2e-13
gb|AAO85511.1| CSN8 [Nicotiana benthamiana] 67 3e-13
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi... 81 3e-13
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ... 81 3e-13
ref|XP_006491861.1| PREDICTED: COP9 signalosome complex subunit ... 68 5e-13
ref|XP_006432299.1| hypothetical protein CICLE_v10002548mg [Citr... 69 9e-13
ref|XP_007148469.1| hypothetical protein PHAVU_006G211500g [Phas... 67 9e-13
gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays] 79 9e-13
ref|NP_001235860.1| uncharacterized protein LOC100500543 [Glycin... 67 2e-12
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 79 2e-12
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi... 78 2e-12
ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containi... 78 2e-12
>gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus guttatus]
Length = 552
Score = 105 bits (263), Expect = 9e-21
Identities = 50/77 (64%), Positives = 59/77 (76%)
Frame = +1
Query: 4 GCTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEA 183
GC HD +T+TILI GHCM+GRMFEA+ +Y+KMLSVGC PDNIT S +S LRKAGMA EA
Sbjct: 462 GCVHDKMTFTILILGHCMKGRMFEAIGMYNKMLSVGCVPDNITMSSLISCLRKAGMAREA 521
Query: 184 NVVEDNARARSSSSEKK 234
N +E A SSS K+
Sbjct: 522 NEIEQKALFSVSSSSKR 538
>gb|EPS73770.1| hypothetical protein M569_00985 [Genlisea aurea]
Length = 301
Score = 90.1 bits (222), Expect = 5e-16
Identities = 45/70 (64%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = +1
Query: 4 GCT--HDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAH 177
GC+ HD +T+TILI GHCM+GRM EA+RIY KM+ VGC PD+IT VS LRKAGMA
Sbjct: 229 GCSRAHDKMTFTILILGHCMKGRMVEAIRIYEKMVYVGCRPDDITWSCLVSCLRKAGMAR 288
Query: 178 EANVVEDNAR 207
EAN +E N R
Sbjct: 289 EANRIERNDR 298
>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
[Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 85.1 bits (209), Expect = 2e-14
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = +1
Query: 7 CTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEAN 186
C D IT+TILI GHCM+GRMFEAV I+ KM+++GC+PD IT S +S L KAGMA EA
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 187 VVEDNARARSSSSEKKLYTK 246
+ AR S++ L TK
Sbjct: 508 HLNQIARKGQSNNVVPLETK 527
>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
gi|565479514|ref|XP_006297397.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566105|gb|EOA30294.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566106|gb|EOA30295.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
Length = 535
Score = 83.6 bits (205), Expect = 5e-14
Identities = 43/79 (54%), Positives = 53/79 (67%)
Frame = +1
Query: 7 CTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEAN 186
C D IT+TILI GHCM+GRMFEAV I+ KM+++GC+PD IT S +S L KAGMA EA
Sbjct: 449 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVNSLLSCLLKAGMAEEAY 508
Query: 187 VVEDNARARSSSSEKKLYT 243
+ AR S+ L T
Sbjct: 509 HLNQIARKAQSNDVAPLET 527
>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 82.4 bits (202), Expect = 1e-13
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = +1
Query: 7 CTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEAN 186
C D IT+TILI GHCM+GRMFEAV I+ KM+++GC+PD IT S +S L KAGMA EA
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 187 VVEDNARARSSSS 225
+ AR S++
Sbjct: 508 HLNQIARKGQSNN 520
>ref|XP_004978029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Setaria italica]
Length = 536
Score = 82.0 bits (201), Expect = 1e-13
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +1
Query: 4 GCTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEA 183
GC D TYTILI GHCM+GR+ EAV ++ KM+ GC PDNIT SF+S L KAGM +E
Sbjct: 446 GCHPDKYTYTILIIGHCMKGRISEAVTLFHKMVETGCHPDNITVDSFISCLLKAGMPNEV 505
Query: 184 NVVEDNARARSSSSEK 231
+ + A +SSS+K
Sbjct: 506 DRIMLIASGHASSSQK 521
>ref|XP_007039692.1| COP9 signalosome, subunit CSN8 isoform 1 [Theobroma cacao]
gi|508776937|gb|EOY24193.1| COP9 signalosome, subunit
CSN8 isoform 1 [Theobroma cacao]
Length = 197
Score = 68.6 bits (166), Expect(2) = 2e-13
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +1
Query: 220 SSEKKLYTKRMFGLLQSAYSKISVQDTARFLGKNEEEAANYVVQHDWSLDP 372
+S +LYTKRMFGLL SAYS IS+QD A+FLG +E++A NY ++ W++DP
Sbjct: 112 ASFSELYTKRMFGLLLSAYSTISIQDAAQFLGMSEDDATNYALRQGWTVDP 162
Score = 33.1 bits (74), Expect(2) = 2e-13
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 369 PVSRMLTVKKQAVATEQKL 425
PVS+MLTVKKQA+ EQKL
Sbjct: 162 PVSQMLTVKKQAIVREQKL 180
>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum tuberosum]
gi|565370447|ref|XP_006351832.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum tuberosum]
Length = 550
Score = 81.3 bits (199), Expect = 2e-13
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +1
Query: 4 GCTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEA 183
GC HD IT+TILI GHCM+GRM EA+ I+ KMLS+GC PD+IT S L KAGM EA
Sbjct: 457 GCCHDKITFTILILGHCMKGRMLEAMAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEA 516
>ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508782996|gb|EOY30252.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 592
Score = 81.3 bits (199), Expect = 2e-13
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = +1
Query: 7 CTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEAN 186
C D +T+TILI GHCM+GRMFEA+ I++KMLSVGC PD++T S +S L KAGM EA+
Sbjct: 500 CHPDKVTFTILIIGHCMKGRMFEAISIFNKMLSVGCTPDDVTVNSLISCLLKAGMPSEAS 559
>gb|AAO85511.1| CSN8 [Nicotiana benthamiana]
Length = 197
Score = 67.0 bits (162), Expect(2) = 3e-13
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +1
Query: 220 SSEKKLYTKRMFGLLQSAYSKISVQDTARFLGKNEEEAANYVVQHDWSLDP 372
+S +LY KRMF LL SAYS IS QDTA+FLG NE +A NYV+Q W LDP
Sbjct: 112 ASFAELYRKRMFELLLSAYSTISPQDTAQFLGMNENDATNYVLQQGWVLDP 162
Score = 34.3 bits (77), Expect(2) = 3e-13
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 369 PVSRMLTVKKQAVATEQKL 425
P S+MLTVKKQAV TEQKL
Sbjct: 162 PASQMLTVKKQAVVTEQKL 180
>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Solanum lycopersicum]
Length = 550
Score = 80.9 bits (198), Expect = 3e-13
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +1
Query: 4 GCTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEA 183
GC HD IT+TILI GHCM+GRM EA+ I+ KMLS+GC PD+IT S L KAGM EA
Sbjct: 457 GCCHDKITFTILILGHCMKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVKEA 516
>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331650|gb|EFH62069.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 536
Score = 80.9 bits (198), Expect = 3e-13
Identities = 42/80 (52%), Positives = 52/80 (65%)
Frame = +1
Query: 7 CTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEAN 186
C D IT+TILI GHCM+GRMFEAV I+ KM+++GC+PD IT S +S L KAGMA EA
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 187 VVEDNARARSSSSEKKLYTK 246
+ A + L TK
Sbjct: 508 HLNQIAHKGQINDGAPLETK 527
>ref|XP_006491861.1| PREDICTED: COP9 signalosome complex subunit 8-like [Citrus
sinensis]
Length = 197
Score = 67.8 bits (164), Expect(2) = 5e-13
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +1
Query: 232 KLYTKRMFGLLQSAYSKISVQDTARFLGKNEEEAANYVVQHDWSLDP 372
+LYTKRMF LL SAYS IS QDTA FLG NE++AA YV Q W+LDP
Sbjct: 116 ELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDP 162
Score = 32.7 bits (73), Expect(2) = 5e-13
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 369 PVSRMLTVKKQAVATEQKL 425
P SRMLTVKKQ + TEQKL
Sbjct: 162 PASRMLTVKKQPLVTEQKL 180
>ref|XP_006432299.1| hypothetical protein CICLE_v10002548mg [Citrus clementina]
gi|557534421|gb|ESR45539.1| hypothetical protein
CICLE_v10002548mg [Citrus clementina]
Length = 197
Score = 68.6 bits (166), Expect(2) = 9e-13
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +1
Query: 232 KLYTKRMFGLLQSAYSKISVQDTARFLGKNEEEAANYVVQHDWSLDP 372
+LYTKRMF LL SAYS IS QDTA FLG NE++AA YV Q W+LDP
Sbjct: 116 ELYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDP 162
Score = 31.2 bits (69), Expect(2) = 9e-13
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 369 PVSRMLTVKKQAVATEQKL 425
P SRMLTVKKQ TEQKL
Sbjct: 162 PASRMLTVKKQPHVTEQKL 180
>ref|XP_007148469.1| hypothetical protein PHAVU_006G211500g [Phaseolus vulgaris]
gi|593695943|ref|XP_007148470.1| hypothetical protein
PHAVU_006G211500g [Phaseolus vulgaris]
gi|561021692|gb|ESW20463.1| hypothetical protein
PHAVU_006G211500g [Phaseolus vulgaris]
gi|561021693|gb|ESW20464.1| hypothetical protein
PHAVU_006G211500g [Phaseolus vulgaris]
Length = 197
Score = 67.0 bits (162), Expect(2) = 9e-13
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +1
Query: 232 KLYTKRMFGLLQSAYSKISVQDTARFLGKNEEEAANYVVQHDWSLDP 372
+LYTK MF LL SAYS IS++DTA FLG NE++A NYV+Q W++DP
Sbjct: 116 ELYTKEMFQLLLSAYSTISIKDTALFLGMNEDDATNYVLQQGWTVDP 162
Score = 32.7 bits (73), Expect(2) = 9e-13
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +3
Query: 369 PVSRMLTVKKQAVATEQKLKH 431
P SRM VKKQ V TEQKL H
Sbjct: 162 PASRMFIVKKQPVVTEQKLDH 182
>gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 79.3 bits (194), Expect = 9e-13
Identities = 39/76 (51%), Positives = 52/76 (68%)
Frame = +1
Query: 4 GCTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEA 183
GC D TYTILI GHCM+GR+ EAV ++ KM+ GC PDNIT SF+S + KAGM +E
Sbjct: 324 GCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAGMPNEV 383
Query: 184 NVVEDNARARSSSSEK 231
+ + A +S+S+K
Sbjct: 384 HQIMLIASGHASASQK 399
>ref|NP_001235860.1| uncharacterized protein LOC100500543 [Glycine max]
gi|255630595|gb|ACU15657.1| unknown [Glycine max]
Length = 197
Score = 67.4 bits (163), Expect(2) = 2e-12
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +1
Query: 127 ITKISFVSFLRKAGMAHEANVVEDNARARSS--SSEKKLYTKRMFGLLQSAYSKISVQDT 300
+ KI +LR HEA D + + +S +LYTK MF LL SAYS IS++DT
Sbjct: 79 VWKIGQKLWLRDYAGVHEAIRAFDWTQELQALVASFAELYTKEMFQLLLSAYSTISIKDT 138
Query: 301 ARFLGKNEEEAANYVVQHDWSLDP 372
A FLG NE++A NY++Q W++DP
Sbjct: 139 ALFLGMNEDDATNYLLQQGWTVDP 162
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 369 PVSRMLTVKKQAVATEQKL 425
P SRML VKKQ V TEQKL
Sbjct: 162 PASRMLIVKKQPVVTEQKL 180
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 78.6 bits (192), Expect = 2e-12
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = +1
Query: 7 CTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEA 183
C D ITYTILI GHCM+GR+ EA+ I+++ML GCAPD+IT S +S L KAGM +EA
Sbjct: 479 CKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEA 537
>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Citrus sinensis]
gi|568841566|ref|XP_006474729.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Citrus sinensis]
Length = 595
Score = 78.2 bits (191), Expect = 2e-12
Identities = 35/59 (59%), Positives = 46/59 (77%)
Frame = +1
Query: 7 CTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEA 183
C D +T+TILI GHCM+GRM EA+ I++KML++GCAPD+IT S +S L K GM +EA
Sbjct: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLTIGCAPDDITVNSLISCLLKGGMPNEA 561
>ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 78.2 bits (191), Expect = 2e-12
Identities = 37/76 (48%), Positives = 51/76 (67%)
Frame = +1
Query: 4 GCTHDVITYTILICGHCMEGRMFEAVRIYSKMLSVGCAPDNITKISFVSFLRKAGMAHEA 183
GC D TYTILI GHCM+GR+ EA+ ++KM+ GC+PD+IT SF+ L KAGM E
Sbjct: 470 GCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEV 529
Query: 184 NVVEDNARARSSSSEK 231
+ + A +SSS++
Sbjct: 530 DRIMKIASGSTSSSQE 545