BLASTX nr result

ID: Mentha29_contig00013117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00013117
         (1231 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004240456.1| PREDICTED: uncharacterized protein LOC101256...    62   5e-07
ref|XP_006367791.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-...    62   7e-07

>ref|XP_004240456.1| PREDICTED: uncharacterized protein LOC101256594 [Solanum
           lycopersicum]
          Length = 215

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
 Frame = -1

Query: 307 SNPQEIXXXXXXXXXXRMLDVDLNAAPPCEN--QGAIPNNTRFQGRQDAGRNGT--LXXX 140
           S+ Q I           +L+VDLNAAPP EN  Q   P +    G    GR G+      
Sbjct: 6   SSAQPIRRTRSQSRRNTVLNVDLNAAPPAENRIQEGDPIHV-VSGDTPQGRRGSSLTAGA 64

Query: 139 XXXXXXXXXXXISSPTAFAEAKNNSRRNRGRAIVVDVENDERSSR 5
                      ISSP AFA AKNNSRRN+GR IV+DV++++R+SR
Sbjct: 65  IDVEALDDDVIISSPRAFAVAKNNSRRNQGRVIVLDVDSEDRASR 109


>ref|XP_006367791.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Solanum
           tuberosum]
          Length = 215

 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
 Frame = -1

Query: 307 SNPQEIXXXXXXXXXXRMLDVDLNAAPPCENQG-------AIPNNTRFQGRQDAGRNGTL 149
           S+ Q I           +L+VDLNAAPP EN+         +P +T  QG + A      
Sbjct: 6   SSSQPISRTRSQSRRNTLLNVDLNAAPPTENRDQEGDPIHVVPGDTP-QGLRGASLTA-- 62

Query: 148 XXXXXXXXXXXXXXISSPTAFAEAKNNSRRNRGRAIVVDVENDERSSR 5
                         ISSP AFA AKNNSRRN+GR IV+DV++++R+SR
Sbjct: 63  -GAIDVESLDDDVIISSPRAFAAAKNNSRRNQGRVIVLDVDSEDRASR 109


Top