BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00012665
         (1271 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX76353.1| gag-pol fusion protein [Rhizophagus irregularis D...   396   e-107
gb|ABM55238.1| integrase [Beta vulgaris]                              388   e-105
gb|ABH08430.1| putative integrase [Beta vulgaris]                     388   e-105
emb|CAN64305.1| hypothetical protein VITISV_026331 [Vitis vinifera]   386   e-105
gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]         386   e-104
gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]     385   e-104
emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]   385   e-104
gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subc...   384   e-104
emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]         384   e-104
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  383   e-103
emb|CAN67988.1| hypothetical protein VITISV_017211 [Vitis vinifera]   381   e-103
gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]     381   e-103
gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Grou...   380   e-103
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]         380   e-103
gb|ABF97883.1| retrotransposon protein, putative, unclassified [...   380   e-103
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    379   e-102
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                379   e-102
gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]     379   e-102
emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]   378   e-102
emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]          374   e-101

>gb|EXX76353.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 514

 Score =  396 bits (1017), Expect = e-107
 Identities = 194/371 (52%), Positives = 253/371 (68%), Gaps = 1/371 (0%)
 Frame = +1

Query: 7    YKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDIIF 186
            +KL KAVYGLKQAPRAWY TLSTF    GFKRGS+D TLF   +   +L+VQIYVDDIIF
Sbjct: 144  FKLQKAVYGLKQAPRAWYSTLSTFLEESGFKRGSIDQTLFRKIFNKHLLIVQIYVDDIIF 203

Query: 187  GSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGVQ 366
            GS  + L  +F +LMK +++MSM+GEM  FLGLQVKQS+DGIFI Q  Y   L  +F + 
Sbjct: 204  GSTDESLSIKFADLMKSKFEMSMIGEMTTFLGLQVKQSSDGIFINQENYVKNLLTRFSLD 263

Query: 367  DSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQANP 546
             S + K PM    K+D+D  GKP                TASRPDI F+  +CARYQANP
Sbjct: 264  KSNTAKTPMALGYKLDADLNGKPVDQKKYRGMIGSLLYLTASRPDIMFSTCVCARYQANP 323

Query: 547  KESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLGS 726
             ESH  A K+I +Y+KGT + GLWYP + +F+L  + D+DYGGC+LDRKSTSG+CQFLG 
Sbjct: 324  MESHAIAVKRIFKYLKGTPSLGLWYPANSDFQLNAFTDSDYGGCRLDRKSTSGSCQFLGG 383

Query: 727  KLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAIA 906
            +L+SW SKKQ+ V+TST +AEY+A  +CC+Q++W++ QL+DYG  V ++PIFCD+TSAIA
Sbjct: 384  RLVSWTSKKQSCVSTSTAEAEYVAAASCCSQVMWMQTQLRDYGYKVSQIPIFCDSTSAIA 443

Query: 907  LTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCGK 1086
            ++ N V+H+  K            ++K  I +  I+T+ Q AD+ TK L E +F    G+
Sbjct: 444  ISHNPVHHSMTKHIDIRYHFLKDNIQKGHIELHFINTEDQIADVFTKALDETKFQYFLGR 503

Query: 1087 LGMLRM-NIQP 1116
            LGML   NI P
Sbjct: 504  LGMLNPDNIHP 514


>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score =  388 bits (996), Expect = e-105
 Identities = 198/367 (53%), Positives = 251/367 (68%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKL KA+YGLKQAPR+WYE LS F L   FKRG VD TLF      DILLVQIYVDDII
Sbjct: 1149 VYKLDKALYGLKQAPRSWYERLSKFLLENNFKRGKVDKTLFLKSKGTDILLVQIYVDDII 1208

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FG+ ++ LC  F  L+  E++MSMMGE+NFFLGLQ+KQ+  GI + Q KY  EL  K+G+
Sbjct: 1209 FGATNETLCKEFSRLVSNEFEMSMMGELNFFLGLQIKQTEKGIIVHQQKYIKELLKKYGL 1268

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            ++S+    PM  + ++D D  G     T            TASRPDI+F+VG+CAR+QAN
Sbjct: 1269 ENSKINHTPMGTSTRLDEDSIGTSVDQTKYRGMIGLLLYLTASRPDIAFSVGLCARFQAN 1328

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKESHL A K+ILRY+KGT + GL+YP  D FEL GYADADY G  ++RKSTSG  QFLG
Sbjct: 1329 PKESHLTAVKRILRYLKGTDDLGLYYPRSDTFELKGYADADYAGDLVNRKSTSGMAQFLG 1388

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW +KKQ +VA ST +AEY+A   CC+Q+LW+KQQL DYGI    VPI+CDNTSAI
Sbjct: 1389 HSLVSWSTKKQNTVALSTAEAEYVAAAACCSQMLWIKQQLSDYGINFECVPIYCDNTSAI 1448

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
            +++ + V+H+R K            VEK  I +E   TD Q ADILTKPL  +R+  L  
Sbjct: 1449 SISKDPVHHSRVKHIHIRHHFLRENVEKGLIKLEFCQTDYQIADILTKPLQRDRYEKLRL 1508

Query: 1084 KLGMLRM 1104
            +L ++++
Sbjct: 1509 ELCLIKI 1515


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score =  388 bits (996), Expect = e-105
 Identities = 198/367 (53%), Positives = 251/367 (68%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKL KA+YGLKQAPR+WYE LS F L   FKRG VD TLF      DILLVQIYVDDII
Sbjct: 1149 VYKLDKALYGLKQAPRSWYERLSKFLLENNFKRGKVDKTLFLKSKGTDILLVQIYVDDII 1208

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FG+ ++ LC  F  L+  E++MSMMGE+NFFLGLQ+KQ+  GI + Q KY  EL  K+G+
Sbjct: 1209 FGATNETLCKEFSRLVSNEFEMSMMGELNFFLGLQIKQTEKGIIVHQQKYIKELLKKYGL 1268

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            ++S+    PM  + ++D D  G     T            TASRPDI+F+VG+CAR+QAN
Sbjct: 1269 ENSKINHTPMGTSTRLDEDSIGTSVDQTKYRGMIGLLLYLTASRPDIAFSVGLCARFQAN 1328

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKESHL A K+ILRY+KGT + GL+YP  D FEL GYADADY G  ++RKSTSG  QFLG
Sbjct: 1329 PKESHLTAVKRILRYLKGTDDLGLYYPRSDTFELKGYADADYAGDLVNRKSTSGMAQFLG 1388

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW +KKQ +VA ST +AEY+A   CC+Q+LW+KQQL DYGI    VPI+CDNTSAI
Sbjct: 1389 HSLVSWSTKKQNTVALSTAEAEYVAAAACCSQMLWIKQQLSDYGINFECVPIYCDNTSAI 1448

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
            +++ + V+H+R K            VEK  I +E   TD Q ADILTKPL  +R+  L  
Sbjct: 1449 SISKDPVHHSRVKHIHIRHHFLRENVEKGLIKLEFCQTDYQIADILTKPLQRDRYEKLRL 1508

Query: 1084 KLGMLRM 1104
            +L ++++
Sbjct: 1509 ELCLIKI 1515


>emb|CAN64305.1| hypothetical protein VITISV_026331 [Vitis vinifera]
          Length = 763

 Score =  386 bits (992), Expect = e-105
 Identities = 195/378 (51%), Positives = 256/378 (67%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            V++L KA+YGLKQAPRAWYE L+ F L  GFK G++D TLF    + D+LLVQIYVDDI+
Sbjct: 163  VFRLKKALYGLKQAPRAWYERLNNFLLKKGFKMGNIDTTLFIKTKENDMLLVQIYVDDIV 222

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            F + +  LC++F + M  E++MSMMGE+NFFLGLQ+KQ  +G FI Q+KY  +L  +F +
Sbjct: 223  FRATNVSLCEKFSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIRDLLKRFNM 282

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +++ ++K PM ++ K+D D +GKP + T            TASRPDI ++V +C R+Q  
Sbjct: 283  EEAETMKTPMSSSIKLDMDEKGKPVNSTMYRGMIGSLLYLTASRPDIMYSVCLCVRFQFC 342

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
             KESHL A K+ILRY+KGT + GLWYP  DNFEL GY+DAD+ GCK++RK+TSGTC FL 
Sbjct: 343  SKESHLSAIKRILRYLKGTMDIGLWYPKGDNFELIGYSDADFAGCKVERKNTSGTCHFLR 402

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              LISW SKKQ SVA ST +AEY+A   CCAQILW+KQ L D+ +    VPI CDNTSAI
Sbjct: 403  HSLISWHSKKQNSVALSTAEAEYIAADLCCAQILWMKQTLSDFNVIFEHVPIKCDNTSAI 462

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             ++ N V H+R K             +K DIT+E + T  Q  DI TKPL EE+F  +  
Sbjct: 463  NISKNPVQHSRTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLVDIFTKPLSEEQFVDIRR 522

Query: 1084 KLGMLRMNIQPKLENGSS 1137
            +LGM      P+ E G+S
Sbjct: 523  QLGM-----APRRETGTS 535


>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score =  386 bits (991), Expect = e-104
 Identities = 184/313 (58%), Positives = 234/313 (74%)
 Frame = +1

Query: 4   VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
           VYKL KA+YGLKQAPRAWY+TLSTF L  GF RG +D TLF  K+KG+++LVQIYVDDII
Sbjct: 32  VYKLDKALYGLKQAPRAWYDTLSTFLLENGFSRGKIDNTLFLRKHKGNVILVQIYVDDII 91

Query: 184 FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
           FG+  + +C +F +LM+ +Y+ S+MGE+ FFLGLQVKQS  GIFI QSKY  +L  KF  
Sbjct: 92  FGATKESMCRKFSKLMQSKYETSLMGELTFFLGLQVKQSDKGIFINQSKYVKDLLKKFDF 151

Query: 364 QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +  S+K PM    K+++D +GK  ++T            TASRPDI F+  +CARYQAN
Sbjct: 152 NECSSMKTPMAPPLKLNADPDGKSVNVTSYRGMIGSLLYLTASRPDIMFSTCLCARYQAN 211

Query: 544 PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
           PKESHL A K+I RY+KGT N GLWYP D  F+LTG++D++Y GCK+DRKST+G+CQ LG
Sbjct: 212 PKESHLAAVKRIFRYLKGTPNLGLWYPKDSGFDLTGFSDSNYAGCKVDRKSTTGSCQLLG 271

Query: 724 SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
            KL+SW SKKQ SV+TST +AEY+A G+CCAQ+LW+K QL DY     ++PIFCDN+SAI
Sbjct: 272 GKLVSWTSKKQHSVSTSTAEAEYVAAGSCCAQVLWMKNQLADYDQVFTEIPIFCDNSSAI 331

Query: 904 ALTVNHVYHTRCK 942
           A+  N V H+R K
Sbjct: 332 AIANNPVLHSRSK 344


>gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1584

 Score =  385 bits (990), Expect = e-104
 Identities = 191/365 (52%), Positives = 243/365 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKL KA+YGLKQAPRAWYE L  F L   FK G V+ TLFT     D  + QIYVDDII
Sbjct: 1214 VYKLSKALYGLKQAPRAWYERLRYFLLSKDFKIGKVNTTLFTKIIGDDFFVCQIYVDDII 1273

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS +++ C  FG++M  E++MSM+GE+NFFLGLQ+KQ  DG F+ Q+KY  +L  +FG+
Sbjct: 1274 FGSTNEVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGL 1333

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GKP  +             TASRPDI F+V +CAR+QA 
Sbjct: 1334 EDAKPIKTPMATNGHLDLDKGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAA 1393

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKE HL A K+ILRY+K ++  GLWYP    F+L GY+D+DY  CK+DRKSTSG+CQ LG
Sbjct: 1394 PKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDSDYASCKVDRKSTSGSCQMLG 1453

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +AEY++ G+CCAQ+LW+KQ L DYGI+  K P+ CDN  AI
Sbjct: 1454 RSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDRAI 1513

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K            V K DI +  I T+ Q ADI TKPL E RF  L  
Sbjct: 1514 KIANNPVQHSRTKHIDIRHHFLRDHVTKCDIVISHIRTEDQLADIFTKPLNETRFCKLRN 1573

Query: 1084 KLGML 1098
            +L ++
Sbjct: 1574 ELNVI 1578


>emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]
          Length = 887

 Score =  385 bits (990), Expect = e-104
 Identities = 191/362 (52%), Positives = 251/362 (69%)
 Frame = +1

Query: 19   KAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDIIFGSRS 198
            +A+YGLKQAPRAWYE LS F L  GFK G +D TLF      D+LLVQIYVDDIIFG+ +
Sbjct: 526  EALYGLKQAPRAWYERLSKFLLKKGFKMGKIDTTLFIKTKDNDMLLVQIYVDDIIFGATN 585

Query: 199  KLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGVQDSRS 378
              LC+ F + M  E++MSMMGE+NFFLGLQ+KQ  +G FI Q+KY  +L  +F ++++++
Sbjct: 586  VSLCEGFSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIRDLLKRFNMEEAKT 645

Query: 379  LKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQANPKESH 558
            +K PM ++ K+D D + KP + T            T SRPDI ++V +CAR+Q+ PK+SH
Sbjct: 646  MKTPMSSSIKLDMDEKCKPVNSTMYRGMIGSLLYLTTSRPDIMYSVCLCARFQSCPKKSH 705

Query: 559  LEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLGSKLIS 738
            L A K+ILRY+KGT + GLWYP  DNFEL GY+DAD+ GCK++RKSTS TC FLG  L+S
Sbjct: 706  LSAVKRILRYLKGTMDIGLWYPKGDNFELIGYSDADFDGCKVERKSTSDTCHFLGHSLVS 765

Query: 739  WFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAIALTVN 918
            W+SKKQ SVA ST +AEY+A G CCAQILW+KQ L D+ +    VPI CDNTSAI ++ N
Sbjct: 766  WYSKKQNSVALSTVEAEYIAVGLCCAQILWMKQTLSDFNLIFEHVPIKCDNTSAINISKN 825

Query: 919  HVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCGKLGML 1098
             V H+R K             +K DIT+E + T  Q ADI TKPL EE+F  +  +LG++
Sbjct: 826  PVQHSRTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLSEEQFVDIRRQLGVI 885

Query: 1099 RM 1104
             +
Sbjct: 886  SL 887


>gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2112

 Score =  384 bits (987), Expect = e-104
 Identities = 191/362 (52%), Positives = 241/362 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKL KA+YGLKQAPRAWYE L  F L   FK G V+ TLFT     D  + QIYVDDII
Sbjct: 1214 VYKLSKALYGLKQAPRAWYERLRYFLLSKDFKIGKVNTTLFTKIIGDDFFVCQIYVDDII 1273

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS +++ C  FG++M  E++MSM+GE+NFFLGLQ+KQ  DG F+ Q+KY  +L  +FG+
Sbjct: 1274 FGSTNEVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGL 1333

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GKP  +             TASRPDI F+V +CAR+QA 
Sbjct: 1334 EDAKPIKTPMATNGHLDLDKGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAA 1393

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKE HL A K+ILRY+K ++  GLWYP    F+L GY+D+DY  CK+DRKSTSG+CQ LG
Sbjct: 1394 PKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDSDYASCKVDRKSTSGSCQMLG 1453

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +AEY++ G+CCAQ+LW+KQ L DYGI+  K P+ CDN  AI
Sbjct: 1454 RSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDRAI 1513

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K            V K DI +  I T+ Q ADI TKPL E RF  L  
Sbjct: 1514 KIANNPVQHSRTKHIDIRHHFLRDHVTKCDIVISHIRTEDQLADIFTKPLNETRFCKLRN 1573

Query: 1084 KL 1089
            +L
Sbjct: 1574 EL 1575


>emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]
          Length = 1510

 Score =  384 bits (985), Expect = e-104
 Identities = 189/365 (51%), Positives = 239/365 (65%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKLHKA+YGLKQAPRAWYE L  F L  GF+ G+ D TLFT K+K D+ + QIYVDDII
Sbjct: 1135 VYKLHKALYGLKQAPRAWYECLRDFLLKNGFEIGNADTTLFTKKFKSDLFICQIYVDDII 1194

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS +   C+ F  +M   ++MSMMGE+ FFL LQVKQ+ +G FI Q+KY  ++  KFG+
Sbjct: 1195 FGSTNASFCEEFSSIMTKRFEMSMMGELTFFLWLQVKQAQEGTFISQTKYVKDILKKFGM 1254

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GK                  ASRPDI  +V +CAR+QA 
Sbjct: 1255 EDAKPIKTPMPTNGHLDLDDNGKCVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQAE 1314

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKE HL A K+I RY+  T N GLWYP   +FEL GY+D+DY GCK+DRKS +GTCQFLG
Sbjct: 1315 PKECHLIAVKRIQRYLVHTPNLGLWYPKGCDFELLGYSDSDYAGCKVDRKSITGTCQFLG 1374

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SWF KKQ S+  STT+AEY+A G+CCAQ+LW+KQ LKD+G    K P+ CDN SAI
Sbjct: 1375 PSLVSWFPKKQNSIVLSTTEAEYVAAGSCCAQLLWMKQTLKDFGYNFTKTPLLCDNESAI 1434

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H++ K              K DI +  + T+ Q ADI TKPL E+RF  L  
Sbjct: 1435 KIANNPVQHSKTKHIDIHHHFLRDHETKGDICLTHVRTETQLADIFTKPLDEKRFCELRS 1494

Query: 1084 KLGML 1098
            +L  L
Sbjct: 1495 ELNFL 1499


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  383 bits (983), Expect = e-103
 Identities = 189/365 (51%), Positives = 242/365 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VY+L KA+YGLKQAPRAWYE L  F +  GFK G  D TLFT   + D+ + QIYVDDII
Sbjct: 692  VYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDII 751

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS +K  C+ F  +M  +++MSMMGE+ +FLG QVKQ  +G FICQ+KY  ++  KFG+
Sbjct: 752  FGSTNKSTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQEGTFICQTKYTQDILTKFGM 811

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GK                  ASRPDI  +V +CAR+Q++
Sbjct: 812  KDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSD 871

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKESHL A K+ILRY+  T  FGLWYP    F+L GY+DAD+ GCK++RKSTSGTCQFLG
Sbjct: 872  PKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLG 931

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +AEY+A G+CCAQ+LW++Q L DYG  + KVP+ CDN SAI
Sbjct: 932  RSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLLDYGYKLTKVPLLCDNESAI 991

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K             +K DI +  I+T  Q ADI TKPL E+ F  L  
Sbjct: 992  KMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTRLRH 1051

Query: 1084 KLGML 1098
            +L +L
Sbjct: 1052 ELNIL 1056


>emb|CAN67988.1| hypothetical protein VITISV_017211 [Vitis vinifera]
          Length = 1119

 Score =  381 bits (978), Expect = e-103
 Identities = 191/363 (52%), Positives = 246/363 (67%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            V+KL KA+YGLKQAPRAWYE LS F    GFK G +D TLF    + D+LLVQIYVDDII
Sbjct: 623  VFKLKKALYGLKQAPRAWYERLSKFLFKRGFKMGKIDTTLFIKTKESDMLLVQIYVDDII 682

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FG+ +  LC+ F + M  E++MSMMGE+NFF+GLQ+KQ  +G FI Q+KY  +L  +F +
Sbjct: 683  FGATNVSLCEEFSKCMHNEFEMSMMGELNFFIGLQIKQLKEGTFINQAKYIRDLLKRFNM 742

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
             +++++K PM ++ K+D D +GK    T            TAS PDI ++V +CAR+Q+ 
Sbjct: 743  XEAKTMKTPMSSSIKLDKDEKGKSIDSTMYRGMIGSLLYLTASXPDIMYSVCLCARFQSC 802

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKESHL   K ILRY+KGT + GLWYP  DNFEL GY+DAD+  CK++RKSTSGTC FLG
Sbjct: 803  PKESHLSVVKXILRYLKGTMDIGLWYPKGDNFELIGYSDADFASCKVERKSTSGTCHFLG 862

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA S  +AEY+A G CCAQILW+KQ L D+ ++   VPI CDNTSAI
Sbjct: 863  HSLVSWHSKKQNSVALSXAEAEYIAXGLCCAQILWMKQTLNDFNLSFEHVPIKCDNTSAI 922

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             ++ N V  +R K             +K DIT+E + T  Q ADI TKPL EE+F  +  
Sbjct: 923  NISKNPVQXSRTKHIEIRHHFLRDHAQKCDITLEFVSTKDQLADIFTKPLSEEQFVDIRK 982

Query: 1084 KLG 1092
            +LG
Sbjct: 983  QLG 985


>gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1577

 Score =  381 bits (978), Expect = e-103
 Identities = 188/365 (51%), Positives = 241/365 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKL KA+YGL+QAPRAWYE L  F L   FK G VDITLFT     D  + QIYVDDII
Sbjct: 1207 VYKLSKALYGLRQAPRAWYERLRDFLLSKDFKIGKVDITLFTKIIGDDFFVYQIYVDDII 1266

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS +++ C  FG++M  E++MSM+GE++FFLGLQ+KQ  +G F+ Q+KY  +L  +FG+
Sbjct: 1267 FGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKNGTFVSQTKYIKDLLKRFGL 1326

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GKP  +             T SRPDI F+V +CAR+QA 
Sbjct: 1327 EDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTVSRPDIMFSVCMCARFQAA 1386

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKE HL A K+ILRY+K ++  GLWYP    F+L GY+D DY GCK+DRKSTS +CQ LG
Sbjct: 1387 PKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDPDYAGCKVDRKSTSSSCQMLG 1446

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST + EY++ G+CCAQ+LW+KQ L DYGI+  K P+ CDN  AI
Sbjct: 1447 RSLVSWSSKKQNSVALSTAETEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDGAI 1506

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K            V K DI +  I T+ Q ADI TKPL E RF  L  
Sbjct: 1507 KIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRN 1566

Query: 1084 KLGML 1098
            +L ++
Sbjct: 1567 ELNII 1571


>gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|31431391|gb|AAP53179.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1299

 Score =  380 bits (976), Expect = e-103
 Identities = 189/365 (51%), Positives = 242/365 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            V KL K +YGLKQAPRAWYE L  F L   FK G VD TLFT     D  + QIYVDDII
Sbjct: 929  VCKLSKGLYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDDII 988

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS +++ C  FG++M  E++MSM+GE++FFL LQ+KQ  DG F+ Q+KY  +L  +FG+
Sbjct: 989  FGSTNEVFCKEFGDMMSREFEMSMIGELSFFLRLQIKQLKDGTFLSQTKYIKDLLKRFGL 1048

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM+ NG +D D  GKP  +             TASRPDI F+V +CAR+Q  
Sbjct: 1049 EDAKPIKTPMVTNGHLDLDEGGKPVDLKLYHSMIGSLLYLTASRPDIMFSVCMCARFQVA 1108

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKE HL A K+ILRY+K ++  GLWYP    F+L GY+D+DY GCK+DRKSTSG+CQ LG
Sbjct: 1109 PKECHLVAVKRILRYLKHSSIIGLWYPKGAKFKLVGYSDSDYAGCKVDRKSTSGSCQMLG 1168

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +AEY++ G+CCAQ+LW+KQ L DYGI+  K P+ CDN SAI
Sbjct: 1169 RSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQILLDYGISFTKTPLLCDNDSAI 1228

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K            V K DI +  I T+ Q ADI TKPL E RF  L  
Sbjct: 1229 KIANNPVQHSRTKHIDIRHHFLRDHVVKSDIVISHIRTEDQLADIFTKPLDETRFCKLRN 1288

Query: 1084 KLGML 1098
            +L ++
Sbjct: 1289 ELNVI 1293


>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score =  380 bits (975), Expect = e-103
 Identities = 188/365 (51%), Positives = 242/365 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKL KA+YGLKQAPRAWYE L  F +  GFK G  D TLFT   + D+ + QIYVDDII
Sbjct: 1389 VYKLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDII 1448

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS ++  C+ F  +M  +++MSMMGE+ +FLG QVKQ  +G FI Q+KY  ++  KFG+
Sbjct: 1449 FGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQEGTFISQTKYTQDILSKFGM 1508

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GK                  ASRPDI  +V +CAR+Q++
Sbjct: 1509 KDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSD 1568

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKESHL A K+ILRY+  T  FGLWYP    F+L GY+DAD+ GCK++RKSTSGTCQFLG
Sbjct: 1569 PKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLLGYSDADWAGCKINRKSTSGTCQFLG 1628

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +AEY+A G+CCAQ+LW++Q L+DYG  + KVP+ CDN SAI
Sbjct: 1629 RSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAI 1688

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K             +K DI +  I+T  Q ADI TKPL E+ F  L  
Sbjct: 1689 KMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQTFTKLRH 1748

Query: 1084 KLGML 1098
            +L +L
Sbjct: 1749 ELNIL 1753


>gb|ABF97883.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1441

 Score =  380 bits (975), Expect = e-103
 Identities = 190/365 (52%), Positives = 240/365 (65%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKL KA YGLKQAPRAWYE L  F L   FK G VD TLFT     D  + QIYVDDII
Sbjct: 1071 VYKLSKAFYGLKQAPRAWYERLKDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDDII 1130

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS +++ C  FG++M  E++MSM+GE++FFLGLQ+KQ  DG F+ Q+KY  +L  +FG+
Sbjct: 1131 FGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGL 1190

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++  K PM  N  +D D  GKP  +             TASRPDI F+V +CAR+QA 
Sbjct: 1191 EDAKPTKTPMATNRHLDLDEGGKPVDLKLYCSMIGSLLYLTASRPDIMFSVYMCARFQAT 1250

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKE HL A K+I RY+K ++  GLWYP    F+L GY D+DY GCK+DRKSTS +CQ LG
Sbjct: 1251 PKECHLVAVKRIPRYLKHSSTIGLWYPKCAKFKLVGYFDSDYAGCKVDRKSTSDSCQMLG 1310

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +AEY++ G+CCAQ+LW+KQ L DYGI+  K P+ CDN SAI
Sbjct: 1311 RSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDSAI 1370

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K            V+K DI +  I T+ Q ADI TKPL E RF  L  
Sbjct: 1371 KIANNPVQHSRTKHIDIRHHFLRDHVDKCDIVISHIRTENQLADIFTKPLDETRFCKLRN 1430

Query: 1084 KLGML 1098
            +L ++
Sbjct: 1431 ELNVI 1435


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  379 bits (973), Expect = e-102
 Identities = 187/365 (51%), Positives = 242/365 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VY+L KA+YGLKQAPRAWYE L  F +  GFK G  D TLFT   + D+ + QIYVDDII
Sbjct: 692  VYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDII 751

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS ++  C+ F  +M  +++MSMMGE+ +FLG QVKQ  +G FI Q+KY  ++  KFG+
Sbjct: 752  FGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQEGTFISQTKYTQDILAKFGM 811

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GK                  ASRPDI  +V +CAR+Q++
Sbjct: 812  KDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSD 871

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKESHL A K+ILRY+  T  FGLWYP    F+L GY+DAD+ GCK++RKSTSGTCQFLG
Sbjct: 872  PKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLG 931

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +AEY+A G+CCAQ+LW++Q L+DYG  + KVP+ CDN SAI
Sbjct: 932  RSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAI 991

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K             +K DI +  I+T  Q ADI TKPL E+ F  L  
Sbjct: 992  KMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTRLRH 1051

Query: 1084 KLGML 1098
            +L +L
Sbjct: 1052 ELNIL 1056


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  379 bits (973), Expect = e-102
 Identities = 187/365 (51%), Positives = 242/365 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VY+L KA+YGLKQAPRAWYE L  F +  GFK G  D TLFT   + D+ + QIYVDDII
Sbjct: 1521 VYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDII 1580

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS ++  C+ F  +M  +++MSMMGE+ +FLG QVKQ  +G FI Q+KY  ++  KFG+
Sbjct: 1581 FGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLREGTFISQTKYTQDILAKFGM 1640

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GK                  ASRPDI  +V +CAR+Q++
Sbjct: 1641 KDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSD 1700

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKESHL A K+ILRY+  T  FGLWYP    F+L GY+DAD+ GCK++RKSTSGTCQFLG
Sbjct: 1701 PKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLG 1760

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +AEY+A G+CCAQ+LW++Q L+DYG  + KVP+ CDN SAI
Sbjct: 1761 RSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAI 1820

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K             +K DI +  I+T  Q ADI TKPL E+ F  L  
Sbjct: 1821 KMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTRLRH 1880

Query: 1084 KLGML 1098
            +L +L
Sbjct: 1881 ELNIL 1885


>gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1411

 Score =  379 bits (972), Expect = e-102
 Identities = 189/365 (51%), Positives = 241/365 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKL KA+YGLKQAPRAWYE L  F L   FK G VD TLFT     D  + QIYVD II
Sbjct: 1041 VYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDGII 1100

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS +++ C  FG++M  E+ MSM+GE++FFLGLQ+KQ  DG F+ Q+KY  +L  +FG+
Sbjct: 1101 FGSTNEVFCKEFGDMMSREFDMSMIGELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGL 1160

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GKP  +             TASRPDI F+V +CAR+QA 
Sbjct: 1161 EDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAA 1220

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKE HL A K+ILRY+K ++N GLWYP    F+L GY+ +DY  CK+DRKSTSG+CQ LG
Sbjct: 1221 PKECHLVAVKRILRYLKHSSNIGLWYPKGAKFKLVGYSYSDYASCKVDRKSTSGSCQMLG 1280

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +A+Y++ G+CCAQ+LW+KQ L DYGI+  K P+ CDN SAI
Sbjct: 1281 RSLVSWSSKKQNSVALSTAEAKYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDSAI 1340

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K            V K DI +  I T+ Q ADI TKPL E  F  L  
Sbjct: 1341 KIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETCFYKLRN 1400

Query: 1084 KLGML 1098
            +L ++
Sbjct: 1401 ELNVI 1405


>emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]
          Length = 455

 Score =  378 bits (971), Expect = e-102
 Identities = 188/365 (51%), Positives = 248/365 (67%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            V++L K +YGLKQA RAWYE LS F L  GFK G +D TLF      D+LLVQIYVDDII
Sbjct: 89   VFRLKKTLYGLKQAXRAWYERLSKFJLKKGFKMGKIDXTLFIKTKXNDMLLVQIYVDDII 148

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FG+ +  LC+ F + M  E++MSMMGE+NFF+GLQ+KQ  +G FI Q+KY  +L  +F +
Sbjct: 149  FGATNVSLCEEFSKCMHSEFEMSMMGELNFFIGLQIKQLKEGTFINQAKYIRDLLKRFNM 208

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            ++++++K PM ++ K+D D +GK  + T            TASRPDI +++ +CAR+Q+ 
Sbjct: 209  EEAKTMKTPMSSSIKLDMDXKGKLINSTMYRGMIGSLLYLTASRPDIMYSICLCARFQSC 268

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKESHL A K+ILRY+KG  + GLWYP  DNFEL GY DAD+ GCK++RKSTS TC FLG
Sbjct: 269  PKESHLSAVKRILRYLKGIMDIGLWYPKGDNFELIGYLDADFAGCKVERKSTSDTCHFLG 328

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ S+A ST +AEY+A G  CAQILW+KQ L D+ +    VPI CDNTSAI
Sbjct: 329  HSLVSWHSKKQNSIALSTAEAEYIAAGLYCAQILWMKQTLSDFNLIFEHVPIKCDNTSAI 388

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             ++ N V H+R K             +K DIT+E + T  Q  DI TKPL EE+F  +  
Sbjct: 389  NISKNLVQHSRTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLVDIFTKPLSEEQFVDIRR 448

Query: 1084 KLGML 1098
            +LG++
Sbjct: 449  QLGVI 453


>emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]
          Length = 711

 Score =  374 bits (961), Expect = e-101
 Identities = 188/365 (51%), Positives = 241/365 (66%)
 Frame = +1

Query: 4    VYKLHKAVYGLKQAPRAWYETLSTFKLHFGFKRGSVDITLFTFKYKGDILLVQIYVDDII 183
            VYKL KA+YGLKQAPRAWYE L  F L   FK G VD TLFT     D  + QIYVDDII
Sbjct: 341  VYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDDII 400

Query: 184  FGSRSKLLCDRFGELMKYEYKMSMMGEMNFFLGLQVKQSADGIFICQSKYANELAIKFGV 363
            FGS +++ C  F ++M  E++MSM+ E++FFLGLQ+KQ  DG+F+ Q+KY  +L  +FG+
Sbjct: 401  FGSTNEVFCKEFDDMMFREFEMSMIEELSFFLGLQIKQLKDGMFVSQTKYIKDLLKRFGL 460

Query: 364  QDSRSLKVPMIANGKMDSDFEGKPASMTXXXXXXXXXXXXTASRPDISFAVGICARYQAN 543
            +D++ +K PM  NG +D D  GK   +             T SRPDI F+V +CAR+QA 
Sbjct: 461  EDAKPIKTPMATNGHLDLDEGGKLVDLKLYRSMIGSLLYFTVSRPDIMFSVCMCARFQAA 520

Query: 544  PKESHLEAAKKILRYVKGTANFGLWYPCDDNFELTGYADADYGGCKLDRKSTSGTCQFLG 723
            PKE HL A K+ILRY+K ++  GLWYP    F+L GY+D+DY GCK+DRKSTSG+CQ LG
Sbjct: 521  PKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDSDYAGCKVDRKSTSGSCQMLG 580

Query: 724  SKLISWFSKKQTSVATSTTKAEYMATGNCCAQILWLKQQLKDYGITVRKVPIFCDNTSAI 903
              L+SW SKKQ SVA ST +AEY++ G+CCAQ+LW+KQ L DYGI+  K  + CDN SAI
Sbjct: 581  RSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTLLLCDNDSAI 640

Query: 904  ALTVNHVYHTRCKXXXXXXXXXXXXVEKQDITVEKIHTDIQRADILTKPLMEERFNMLCG 1083
             +  N V H+R K            V K DI +  I T+ Q ADI TKPL E RF  L  
Sbjct: 641  KIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRN 700

Query: 1084 KLGML 1098
            +L ++
Sbjct: 701  ELNVI 705