BLASTX nr result
ID: Mentha29_contig00011293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00011293
(1021 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU34724.1| hypothetical protein MIMGU_mgv1a011756mg [Mimulus... 279 1e-72
ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloropla... 273 1e-70
ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citr... 266 8e-69
gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana] 266 8e-69
gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana] 266 1e-68
ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana] g... 266 1e-68
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c... 265 2e-68
ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp.... 264 4e-68
ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Caps... 263 7e-68
ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutr... 263 9e-68
ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloropla... 262 1e-67
ref|XP_007215803.1| hypothetical protein PRUPE_ppa009947mg [Prun... 262 1e-67
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla... 262 1e-67
ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloropla... 261 3e-67
ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Popu... 261 4e-67
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan... 259 9e-67
ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Popu... 259 1e-66
pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b Crystal Stru... 257 6e-66
ref|XP_007031498.1| Polypeptide deformylase, putative isoform 1 ... 256 8e-66
ref|XP_006840722.1| hypothetical protein AMTR_s00096p00105910 [A... 256 1e-65
>gb|EYU34724.1| hypothetical protein MIMGU_mgv1a011756mg [Mimulus guttatus]
Length = 271
Score = 279 bits (714), Expect = 1e-72
Identities = 132/200 (66%), Positives = 168/200 (84%)
Frame = -3
Query: 806 ASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLAAPQV 627
AS DL+FE PL+I++YPDP+LRAKNKRV+TFDE+LK LV EMFDVMY+ +G+GL+APQV
Sbjct: 68 ASPSDLQFEGPLKIIEYPDPKLRAKNKRVDTFDETLKKLVDEMFDVMYKDDGVGLSAPQV 127
Query: 626 GINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPDSVQV 447
G+NVQ++VFNPAG+ G GEE VLVNP I S + VP E CLS PG++ VERP+S+ V
Sbjct: 128 GMNVQVMVFNPAGERGEGEEIVLVNPRINRYSRQIVPFDEGCLSFPGVYADVERPNSLVV 187
Query: 446 DAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKNYEAR 267
+AQDI+G +FE +LTGFPAR+FQHE+DHLQGIL+ D++SDE+L+++R +L LEK YE R
Sbjct: 188 EAQDINGAKFEVNLTGFPARIFQHEFDHLQGILFFDKMSDEILDTIRAELQALEKKYEER 247
Query: 266 TGLPSPEKIDERRSMKKAVG 207
TGLPSPE+ID RR +KKAVG
Sbjct: 248 TGLPSPERIDIRRKIKKAVG 267
>ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloroplastic-like isoform X1
[Citrus sinensis] gi|568832146|ref|XP_006470304.1|
PREDICTED: peptide deformylase 1B, chloroplastic-like
isoform X2 [Citrus sinensis]
gi|568832148|ref|XP_006470305.1| PREDICTED: peptide
deformylase 1B, chloroplastic-like isoform X3 [Citrus
sinensis]
Length = 282
Score = 273 bits (697), Expect = 1e-70
Identities = 129/204 (63%), Positives = 164/204 (80%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
E+P AS DLRFE PL+I++YPDP LRAKNKR++TFD++LK LV EMFD MY+T+GIGL+
Sbjct: 75 EDPVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDDNLKKLVDEMFDFMYKTDGIGLS 134
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVGINVQL+VFNP G+ G GEE VLVNP + S K +P +E CLS PG+H VERP+
Sbjct: 135 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFPGIHADVERPE 194
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI+G RF SL+ PARVFQHE+DHLQGIL+ +R++D+VL+S+R +L LEK
Sbjct: 195 SVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTDDVLDSIREQLEALEKK 254
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE +TGL SPEKI+ + K AVG
Sbjct: 255 YEDKTGLQSPEKIEASKRRKAAVG 278
>ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citrus clementina]
gi|567908433|ref|XP_006446530.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|567908435|ref|XP_006446531.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549140|gb|ESR59769.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549141|gb|ESR59770.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549142|gb|ESR59771.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
Length = 274
Score = 266 bits (681), Expect = 8e-69
Identities = 127/204 (62%), Positives = 162/204 (79%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
E+ AS DLRFE PL+I++YPDP LRAKNKR++TFD +LK LV EMFDVMY+T+GIGL+
Sbjct: 67 EDSVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDYNLKKLVDEMFDVMYKTDGIGLS 126
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVGINVQL+VFNP G+ G GEE VLVNP + S K +P +E CLS PG+H VERP+
Sbjct: 127 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFPGIHADVERPE 186
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI+G RF SL+ PARVFQHE+DHLQGIL+ +R++ +VL+ ++ +L LEK
Sbjct: 187 SVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTGDVLDGIQEQLEALEKK 246
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE +TGL SPEKI+ R+ K AVG
Sbjct: 247 YEDKTGLQSPEKIEARKRRKAAVG 270
>gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana]
Length = 273
Score = 266 bits (681), Expect = 8e-69
Identities = 125/204 (61%), Positives = 163/204 (79%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
++ AS D++FE PL+I++YPDP LRAKNKR++ FDE+LKNLV MFDVMY+T+GIGL+
Sbjct: 66 DDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLS 125
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVG+NVQL+VFNPAG+ G G+E VLVNP IK S K VP E CLS PG++ V RP
Sbjct: 126 APQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 185
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI GERF SL+ PAR+FQHEYDHL+G+L+ DR++D+VL+S+R +L LEK
Sbjct: 186 SVKIDARDITGERFSISLSSLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKK 245
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE +TGLPSPE+++ R+ K VG
Sbjct: 246 YEEKTGLPSPERVEARQKRKAGVG 269
>gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]
Length = 273
Score = 266 bits (679), Expect = 1e-68
Identities = 125/204 (61%), Positives = 163/204 (79%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
++ AS D++FE PL+I++YPDP LRAKNKR++ FDE+LKNLV MFDVMY+T+GIGL+
Sbjct: 66 DDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLS 125
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVG+NVQL+VFNPAG+ G G+E VLVNP IK S K VP E CLS PG++ V RP
Sbjct: 126 APQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 185
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI GERF SL+ PAR+FQHEYDHL+G+L+ DR++D+VL+S+R +L LEK
Sbjct: 186 SVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKK 245
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE +TGLPSPE+++ R+ K VG
Sbjct: 246 YEEKTGLPSPERVEARQKRKAGVG 269
>ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana]
gi|30684999|ref|NP_850821.1| peptide deformylase 1B
[Arabidopsis thaliana]
gi|39932734|sp|Q9FUZ2.2|DEF1B_ARATH RecName:
Full=Peptide deformylase 1B,
chloroplastic/mitochondrial; Short=AtDEF2;
Short=AtPDF1B; Short=PDF 1B; AltName: Full=Polypeptide
deformylase; Flags: Precursor gi|7573315|emb|CAB87633.1|
putative protein [Arabidopsis thaliana]
gi|15292891|gb|AAK92816.1| unknown protein [Arabidopsis
thaliana] gi|20465677|gb|AAM20307.1| unknown protein
[Arabidopsis thaliana] gi|332004676|gb|AED92059.1|
peptide deformylase 1B [Arabidopsis thaliana]
gi|332004677|gb|AED92060.1| peptide deformylase 1B
[Arabidopsis thaliana]
Length = 273
Score = 266 bits (679), Expect = 1e-68
Identities = 125/204 (61%), Positives = 163/204 (79%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
++ AS D++FE PL+I++YPDP LRAKNKR++ FDE+LKNLV MFDVMY+T+GIGL+
Sbjct: 66 DDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLS 125
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVG+NVQL+VFNPAG+ G G+E VLVNP IK S K VP E CLS PG++ V RP
Sbjct: 126 APQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 185
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI GERF SL+ PAR+FQHEYDHL+G+L+ DR++D+VL+S+R +L LEK
Sbjct: 186 SVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKK 245
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE +TGLPSPE+++ R+ K VG
Sbjct: 246 YEEKTGLPSPERVEARQKRKAGVG 269
>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
gi|223539350|gb|EEF40941.1| polypeptide deformylase,
putative [Ricinus communis]
Length = 282
Score = 265 bits (678), Expect = 2e-68
Identities = 126/204 (61%), Positives = 162/204 (79%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
EE A+ DL FEEPL+I++YPDP LR KNKR++TFD++LK LV EMFDVMY+T+GIGL+
Sbjct: 75 EEEIATPADLCFEEPLKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLS 134
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVGINVQL+VFNP G+ G GEE VL+NP + S K VP E CLS PG++ V RP+
Sbjct: 135 APQVGINVQLMVFNPVGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPE 194
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI+G RF +L+G PARVFQHEYDHL+GIL+ DR++DEVL+S+R +L LEK
Sbjct: 195 SVKIDARDINGARFTVNLSGLPARVFQHEYDHLEGILFFDRMTDEVLDSIRAQLQALEKK 254
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
+E +TG SPEKI+ R++ K A G
Sbjct: 255 FEDKTGYASPEKIETRKTKKAAAG 278
>ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319520|gb|EFH49942.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 264 bits (675), Expect = 4e-68
Identities = 127/200 (63%), Positives = 157/200 (78%)
Frame = -3
Query: 806 ASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLAAPQV 627
AS DL+FE PL I++YPDP LRAKNKR+ FD++LKNLV MFDVMY+T+GIGL+APQV
Sbjct: 70 ASASDLQFETPLRIVEYPDPILRAKNKRIGVFDQNLKNLVDAMFDVMYKTDGIGLSAPQV 129
Query: 626 GINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPDSVQV 447
G+NVQL+VFNPAG+ G GEE VLVNP IK S K VP E CLS PG++ V RP SV++
Sbjct: 130 GLNVQLMVFNPAGEPGEGEEIVLVNPIIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKI 189
Query: 446 DAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKNYEAR 267
DA+DI GERF SL+ PAR+FQHEYDHL+G+L+ DR++D+VL+S+R +L LEK YE +
Sbjct: 190 DARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEK 249
Query: 266 TGLPSPEKIDERRSMKKAVG 207
TGLPSPE+I R K VG
Sbjct: 250 TGLPSPERIQARHKRKAGVG 269
>ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Capsella rubella]
gi|482557139|gb|EOA21331.1| hypothetical protein
CARUB_v10001691mg [Capsella rubella]
Length = 273
Score = 263 bits (673), Expect = 7e-68
Identities = 125/204 (61%), Positives = 158/204 (77%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
E+ AS DL FE PL+I++YPDP LRAKNKR+ FDE+LKNLV MFD+MY+T+GIGL+
Sbjct: 66 EDEVASASDLEFETPLKIVEYPDPILRAKNKRIGVFDENLKNLVDAMFDIMYKTDGIGLS 125
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVG+NVQL+VFNPAG+ G GEE VLVNP I S K VP E CLS PG++ V RP
Sbjct: 126 APQVGLNVQLMVFNPAGEPGEGEEIVLVNPKINKYSDKLVPFDEGCLSFPGIYAEVVRPQ 185
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI G +F SL+ PAR+FQHEYDHL+G+L+ DR++DEVL+S+R +L LEK
Sbjct: 186 SVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDEVLDSIREELEALEKK 245
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE +TGLPSPE++ R+ K VG
Sbjct: 246 YEEKTGLPSPERVQARQKRKAGVG 269
>ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutrema salsugineum]
gi|557101069|gb|ESQ41432.1| hypothetical protein
EUTSA_v10014367mg [Eutrema salsugineum]
Length = 273
Score = 263 bits (672), Expect = 9e-68
Identities = 124/204 (60%), Positives = 159/204 (77%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
++ AS DL+FE PL+I++YPDP LRAKNKR+ FDE+LKNLV MF VMY+T+G+GL+
Sbjct: 66 DDEVASVSDLQFETPLKIVEYPDPILRAKNKRIGVFDENLKNLVDAMFHVMYKTDGVGLS 125
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVG+NVQL+VFNPAG+ G GEE VLVNP I S K VP E CLS PG++ V RP
Sbjct: 126 APQVGLNVQLMVFNPAGERGEGEEIVLVNPKINKYSDKLVPFSEGCLSFPGIYADVVRPQ 185
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI G RF SL+ PAR+FQHEYDHL+G+L+ D+++D+VL+S+R +L LEK
Sbjct: 186 SVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDKMTDQVLDSIREELEALEKK 245
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE +TGLPSPE++ ERR K VG
Sbjct: 246 YEEKTGLPSPERVQERRKRKAGVG 269
>ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 275
Score = 262 bits (670), Expect = 1e-67
Identities = 125/200 (62%), Positives = 159/200 (79%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
E+ AS D+ FE PLEI++YPDP LRAKNKR++TFD++LK LV EMFD+MYRT+GIGL+
Sbjct: 66 EDQVASAADVEFETPLEIVEYPDPILRAKNKRLDTFDDNLKKLVEEMFDIMYRTDGIGLS 125
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVGINVQL+VFNP G+ G GEE VLVNP + S KT E CLS PG++ V+RP+
Sbjct: 126 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVSRYSQKTRLFNEGCLSFPGIYADVQRPE 185
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI G RF +L+G PARVFQHE+DHLQGIL+ DR+++ VLES+ +L LEK
Sbjct: 186 SVKIDARDISGARFTVNLSGLPARVFQHEFDHLQGILFFDRMTEGVLESISEQLQALEKK 245
Query: 278 YEARTGLPSPEKIDERRSMK 219
YE +TGLPSPE+I+ R+ MK
Sbjct: 246 YEDKTGLPSPERIESRKRMK 265
>ref|XP_007215803.1| hypothetical protein PRUPE_ppa009947mg [Prunus persica]
gi|462411953|gb|EMJ17002.1| hypothetical protein
PRUPE_ppa009947mg [Prunus persica]
Length = 271
Score = 262 bits (670), Expect = 1e-67
Identities = 125/204 (61%), Positives = 161/204 (78%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
E+ A+ D+ FE PL+I++YPDP LRAKNKR+++FDE+LK LV EMFD+MY+T+GIGL+
Sbjct: 64 EDEVATAADVEFETPLKIVEYPDPILRAKNKRIDSFDENLKILVDEMFDIMYKTDGIGLS 123
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVGINVQL+VFNP G+ G GEE VLVNP + S KT P E CLS PG++ V RP+
Sbjct: 124 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVSRYSQKTRPFNEGCLSFPGIYADVVRPE 183
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI+G RF +L+G PARVFQHE+DHLQGIL+ DR+S+ VLE++ +L LEK
Sbjct: 184 SVKIDARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMSEGVLETICAQLQTLEKK 243
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE +TGLPSPE+I R+ MK A G
Sbjct: 244 YEDKTGLPSPERIQTRKRMKAATG 267
>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
gi|296087647|emb|CBI34903.3| unnamed protein product
[Vitis vinifera]
Length = 275
Score = 262 bits (670), Expect = 1e-67
Identities = 126/204 (61%), Positives = 158/204 (77%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
EE AS DL FE PL+I++YPDP LRAKNK ++TFD++LK LV EMFDVMY+T+GIGL+
Sbjct: 68 EEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDVMYKTDGIGLS 127
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVGINVQL+VFNP G+ G GEE VLVNP + S K V E CLS PG++ VERP+
Sbjct: 128 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCLSFPGIYADVERPE 187
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI G RF +L+G PARVFQHE+DHLQG L+ DR+++EVL+S+ L DLE+
Sbjct: 188 SVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTEEVLDSIHANLQDLERK 247
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE RTG PSPE+I+ R+ K A G
Sbjct: 248 YEDRTGFPSPERIETRKRRKVAAG 271
>ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Solanum
tuberosum]
Length = 279
Score = 261 bits (667), Expect = 3e-67
Identities = 125/203 (61%), Positives = 160/203 (78%)
Frame = -3
Query: 815 EPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLAA 636
+ A+ DL FE PL+I++YPDP LRAKNKR+ FD +LK LV EMFD+MY+T+GIGL+A
Sbjct: 73 DEIATPADLSFEVPLKIVEYPDPILRAKNKRIGKFDANLKKLVDEMFDIMYKTDGIGLSA 132
Query: 635 PQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPDS 456
PQVG+NVQL+VFN AG+ G GEE VLVNP + S + +P +E CLS P +HG VERPDS
Sbjct: 133 PQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHGDVERPDS 192
Query: 455 VQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKNY 276
V+V AQDI+G RFE SL+ PARVFQHE+DHLQG+L+ D+++DEVL+++R L LEK Y
Sbjct: 193 VKVGAQDINGARFEISLSALPARVFQHEFDHLQGVLFFDKMTDEVLDTIRETLVALEKKY 252
Query: 275 EARTGLPSPEKIDERRSMKKAVG 207
E RTGLP+PE I+ R++ K AVG
Sbjct: 253 EERTGLPTPESINTRKTKKAAVG 275
>ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
gi|566152890|ref|XP_006369926.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|566152892|ref|XP_006369927.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348928|gb|EEE84852.2| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348929|gb|ERP66495.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348930|gb|ERP66496.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
Length = 268
Score = 261 bits (666), Expect = 4e-67
Identities = 124/204 (60%), Positives = 162/204 (79%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
++ A+ DL FE PL+I++YPDP LRAKNKR+++FD++LK LV EMFDVMY+T+GIGL+
Sbjct: 61 QDQVAATSDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLS 120
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVGINVQL+VFNPA +HG G+E VLVNP + S KTV E CLS PG++ V+RP+
Sbjct: 121 APQVGINVQLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPE 180
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI+G RF +L+G PARVFQHE+DHLQGIL+ DR+++EVL+S+R L LEK
Sbjct: 181 SVKIDARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKK 240
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE +TG PSPE+I+ R K A G
Sbjct: 241 YEDKTGFPSPERIETHRLKKVAAG 264
>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
Full=Peptide deformylase 1B, chloroplastic; Short=PDF
1B; AltName: Full=Polypeptide deformylase; Flags:
Precursor gi|11320950|gb|AAG33972.1| peptide
deformylase-like protein [Solanum lycopersicum]
Length = 279
Score = 259 bits (663), Expect = 9e-67
Identities = 124/203 (61%), Positives = 161/203 (79%)
Frame = -3
Query: 815 EPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLAA 636
+ A+ DL F PL+I++YPDP LRAKNKR++ FD +LK LV EMFD+MY+T+GIGL+A
Sbjct: 73 DEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFDIMYKTDGIGLSA 132
Query: 635 PQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPDS 456
PQVG+NVQL+VFN AG+ G GEE VLVNP + S + +P +E CLS P +HG V+RP+S
Sbjct: 133 PQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHGDVKRPES 192
Query: 455 VQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKNY 276
V+VDAQDI+G RFE SL+ PARVFQHE+DHLQG+L+ D+++DEVL+++R KL LEK Y
Sbjct: 193 VKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTDEVLDTIREKLVALEKKY 252
Query: 275 EARTGLPSPEKIDERRSMKKAVG 207
E RTGLP+PE I+ R+ K AVG
Sbjct: 253 EDRTGLPTPESINTRKIKKAAVG 275
>ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
gi|550348931|gb|ERP66497.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
Length = 269
Score = 259 bits (662), Expect = 1e-66
Identities = 123/196 (62%), Positives = 158/196 (80%)
Frame = -3
Query: 794 DLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLAAPQVGINV 615
DL FE PL+I++YPDP LRAKNKR+++FD++LK LV EMFDVMY+T+GIGL+APQVGINV
Sbjct: 70 DLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINV 129
Query: 614 QLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPDSVQVDAQD 435
QL+VFNPA +HG G+E VLVNP + S KTV E CLS PG++ V+RP+SV++DA+D
Sbjct: 130 QLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARD 189
Query: 434 IDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKNYEARTGLP 255
I+G RF +L+G PARVFQHE+DHLQGIL+ DR+++EVL+S+R L LEK YE +TG P
Sbjct: 190 INGARFTVNLSGLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFP 249
Query: 254 SPEKIDERRSMKKAVG 207
SPE+I+ R K A G
Sbjct: 250 SPERIETHRLKKVAAG 265
>pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b Crystal Structure
Length = 193
Score = 257 bits (656), Expect = 6e-66
Identities = 121/192 (63%), Positives = 156/192 (81%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
++ AS D++FE PL+I++YPDP LRAKNKR++ FDE+LKNLV MFDVMY+T+GIGL+
Sbjct: 2 DDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLS 61
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVG+NVQL+VFNPAG+ G G+E VLVNP IK S K VP E CLS PG++ V RP
Sbjct: 62 APQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 121
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI GERF SL+ PAR+FQHEYDHL+G+L+ DR++D+VL+S+R +L LEK
Sbjct: 122 SVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKK 181
Query: 278 YEARTGLPSPEK 243
YE +TGLPSPE+
Sbjct: 182 YEEKTGLPSPER 193
>ref|XP_007031498.1| Polypeptide deformylase, putative isoform 1 [Theobroma cacao]
gi|590645993|ref|XP_007031499.1| Polypeptide
deformylase, putative isoform 1 [Theobroma cacao]
gi|590645997|ref|XP_007031500.1| Polypeptide
deformylase, putative isoform 1 [Theobroma cacao]
gi|590646000|ref|XP_007031501.1| Polypeptide
deformylase, putative isoform 1 [Theobroma cacao]
gi|508710527|gb|EOY02424.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710528|gb|EOY02425.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710529|gb|EOY02426.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710530|gb|EOY02427.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
Length = 278
Score = 256 bits (655), Expect = 8e-66
Identities = 119/207 (57%), Positives = 162/207 (78%)
Frame = -3
Query: 827 MALEEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGI 648
++ ++ AS DLRF+ PL+I++YPDP LR +NKR++TFDE+LK LV EMFDVMY+T+GI
Sbjct: 68 LSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRIDTFDENLKKLVDEMFDVMYKTDGI 127
Query: 647 GLAAPQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVE 468
GL+APQVG+NVQL+VFNP G+ G G+E VLVNP + S KTV E CLS P ++ VE
Sbjct: 128 GLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVNKYSKKTVLFNEGCLSFPRIYADVE 187
Query: 467 RPDSVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDL 288
RP+S+++DA+D++G RF +L+G AR+FQHE+DHLQGIL+ DR++ EVL+S+R +L L
Sbjct: 188 RPESIKIDARDVNGARFTVNLSGLRARIFQHEFDHLQGILFFDRMTGEVLDSIRAQLEAL 247
Query: 287 EKNYEARTGLPSPEKIDERRSMKKAVG 207
EK YE TGLPSPEK++ ++ K A G
Sbjct: 248 EKKYEDTTGLPSPEKVETQKRKKAAAG 274
>ref|XP_006840722.1| hypothetical protein AMTR_s00096p00105910 [Amborella trichopoda]
gi|548842467|gb|ERN02397.1| hypothetical protein
AMTR_s00096p00105910 [Amborella trichopoda]
Length = 273
Score = 256 bits (654), Expect = 1e-65
Identities = 124/204 (60%), Positives = 156/204 (76%)
Frame = -3
Query: 818 EEPFASQLDLRFEEPLEILKYPDPRLRAKNKRVNTFDESLKNLVREMFDVMYRTNGIGLA 639
E+ A+ DL +E PL+I++YPDPRLR +NKRV+ FDE+LK LV EMFDVMY+T+GIGL+
Sbjct: 66 EDGIATPADLSYEAPLKIVEYPDPRLRVRNKRVSVFDENLKELVAEMFDVMYKTDGIGLS 125
Query: 638 APQVGINVQLLVFNPAGKHGRGEETVLVNPHIKGDSGKTVPIKEACLSLPGLHGVVERPD 459
APQVGINVQL+VFNPAG+ G GEE VL+NP + S K V E CLS PG++ VERP
Sbjct: 126 APQVGINVQLMVFNPAGERGEGEELVLINPKVYKYSKKLVLFDEGCLSFPGIYADVERPT 185
Query: 458 SVQVDAQDIDGERFECSLTGFPARVFQHEYDHLQGILYIDRVSDEVLESVRVKLHDLEKN 279
SV++DA+DI G +F L G PARVFQHE+DHLQGIL+ +R+++EVLES+R L LEK
Sbjct: 186 SVKIDARDITGAKFSVHLKGLPARVFQHEFDHLQGILFFERMTEEVLESIRPGLQALEKK 245
Query: 278 YEARTGLPSPEKIDERRSMKKAVG 207
YE TGLPSPE I +R+ +K G
Sbjct: 246 YETLTGLPSPESITKRQGIKAIAG 269