BLASTX nr result
ID: Mentha29_contig00011159
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00011159
(2286 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006360170.1| PREDICTED: replication protein A 70 kDa DNA-... 91 2e-15
ref|XP_006360164.1| PREDICTED: replication protein A 70 kDa DNA-... 91 2e-15
ref|XP_006351301.1| PREDICTED: replication protein A 70 kDa DNA-... 91 2e-15
ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arab... 87 3e-14
gb|EYU45429.1| hypothetical protein MIMGU_mgv1a002922mg [Mimulus... 86 6e-14
ref|XP_006287282.1| hypothetical protein CARUB_v10000503mg [Caps... 85 1e-13
ref|NP_200908.1| replication protein A 70 kDa DNA-binding subuni... 85 2e-13
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab... 85 2e-13
emb|CBI15109.3| unnamed protein product [Vitis vinifera] 85 2e-13
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-... 85 2e-13
ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana] gi|7... 85 2e-13
ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-... 84 3e-13
ref|XP_006394544.1| hypothetical protein EUTSA_v10003822mg [Eutr... 83 5e-13
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea... 83 6e-13
ref|XP_006358205.1| PREDICTED: replication protein A 70 kDa DNA-... 82 1e-12
ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-... 81 2e-12
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici... 80 3e-12
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-... 80 4e-12
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-... 80 4e-12
gb|EXC04889.1| Replication factor A protein 1 [Morus notabilis] 80 5e-12
>ref|XP_006360170.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
isoform X7 [Solanum tuberosum]
Length = 479
Score = 91.3 bits (225), Expect = 2e-15
Identities = 97/416 (23%), Positives = 176/416 (42%), Gaps = 21/416 (5%)
Frame = -3
Query: 2257 IPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNKFQKLILGDGMGHTLDAVIFHDNIDRF 2078
+ +N+I P T+DW C+V++++ P+++ + FQ LIL D + AV++ D I ++
Sbjct: 5 VNINQIEPATQDWICKVQIVEIGRPRESLDKKCTFQNLILEDEEECQIKAVMYTDEIAQY 64
Query: 2077 KHVLQEGSVYMVKGAYVS-DPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS-------IPG 1922
L+ + Y++ A V P Y P +QWT ++T V+E +S P
Sbjct: 65 AATLKLLNTYLISTAKVKVSPTSYGKP--IHKFQWTLDKET-VIEQIKESHEVEKPLPPP 121
Query: 1921 CKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLIREYAAVDTELEPF 1742
KL+ + H + + I+ +++ P+ R Q + RE D + F
Sbjct: 122 TKLNITSFDRLP-HLMVDSAAEIDILAIVLR-CGPQKNAGRSQHR-CREITLCDNQRNQF 178
Query: 1741 VVTFWED---SVSDEIYAKMEPISNRTPLLLLNFSVVPYYGLSLSSNAQSIVLDDSEDDM 1571
+ T WED EI +KM + +L + + Y GLSL + S + +
Sbjct: 179 LFTLWEDFGEIEGHEISSKMATEPDLLVILGRSIGISTYQGLSLQTRYNSTLRVNPTYPQ 238
Query: 1570 LIKLEKWKHENEEIINILVQSTDFFEKKVSHSPKQPL-------QMTTVKEILLTQENTH 1412
+ L KW +N+ +L+ S EK + S P+ Q+ ++ +I
Sbjct: 239 AVALIKWAKDNK---TMLLGSPS--EKTSATSSISPMIVTPAGQQLISIAKISSAPSMGM 293
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVF 1232
F V+ + + +E+QD+ C C K +F C K + SF+ L+
Sbjct: 294 FYVEAEMAILDEFQDFCVLECSGCKQKKRTKDRKDFECPKCNRKTSLVPRCSFQIDLI-- 351
Query: 1231 DTTGQAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQS---DFLKEQLCNVVLLLKIK 1073
D T + +KLL + ++ + QS + E L N V ++++
Sbjct: 352 DNTTITTASISAELGEKLLSMIAEDIFDITCTKRQSLSLTHVHEMLSNKVFEIQLR 407
>ref|XP_006360164.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
isoform X1 [Solanum tuberosum]
gi|565388814|ref|XP_006360165.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit B-like isoform X2
[Solanum tuberosum] gi|565388816|ref|XP_006360166.1|
PREDICTED: replication protein A 70 kDa DNA-binding
subunit B-like isoform X3 [Solanum tuberosum]
gi|565388818|ref|XP_006360167.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit B-like isoform X4
[Solanum tuberosum] gi|565388820|ref|XP_006360168.1|
PREDICTED: replication protein A 70 kDa DNA-binding
subunit B-like isoform X5 [Solanum tuberosum]
gi|565388822|ref|XP_006360169.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit B-like isoform X6
[Solanum tuberosum]
Length = 534
Score = 91.3 bits (225), Expect = 2e-15
Identities = 97/416 (23%), Positives = 176/416 (42%), Gaps = 21/416 (5%)
Frame = -3
Query: 2257 IPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNKFQKLILGDGMGHTLDAVIFHDNIDRF 2078
+ +N+I P T+DW C+V++++ P+++ + FQ LIL D + AV++ D I ++
Sbjct: 60 VNINQIEPATQDWICKVQIVEIGRPRESLDKKCTFQNLILEDEEECQIKAVMYTDEIAQY 119
Query: 2077 KHVLQEGSVYMVKGAYVS-DPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS-------IPG 1922
L+ + Y++ A V P Y P +QWT ++T V+E +S P
Sbjct: 120 AATLKLLNTYLISTAKVKVSPTSYGKP--IHKFQWTLDKET-VIEQIKESHEVEKPLPPP 176
Query: 1921 CKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLIREYAAVDTELEPF 1742
KL+ + H + + I+ +++ P+ R Q + RE D + F
Sbjct: 177 TKLNITSFDRLP-HLMVDSAAEIDILAIVLR-CGPQKNAGRSQHR-CREITLCDNQRNQF 233
Query: 1741 VVTFWED---SVSDEIYAKMEPISNRTPLLLLNFSVVPYYGLSLSSNAQSIVLDDSEDDM 1571
+ T WED EI +KM + +L + + Y GLSL + S + +
Sbjct: 234 LFTLWEDFGEIEGHEISSKMATEPDLLVILGRSIGISTYQGLSLQTRYNSTLRVNPTYPQ 293
Query: 1570 LIKLEKWKHENEEIINILVQSTDFFEKKVSHSPKQPL-------QMTTVKEILLTQENTH 1412
+ L KW +N+ +L+ S EK + S P+ Q+ ++ +I
Sbjct: 294 AVALIKWAKDNK---TMLLGSPS--EKTSATSSISPMIVTPAGQQLISIAKISSAPSMGM 348
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVF 1232
F V+ + + +E+QD+ C C K +F C K + SF+ L+
Sbjct: 349 FYVEAEMAILDEFQDFCVLECSGCKQKKRTKDRKDFECPKCNRKTSLVPRCSFQIDLI-- 406
Query: 1231 DTTGQAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQS---DFLKEQLCNVVLLLKIK 1073
D T + +KLL + ++ + QS + E L N V ++++
Sbjct: 407 DNTTITTASISAELGEKLLSMIAEDIFDITCTKRQSLSLTHVHEMLSNKVFEIQLR 462
>ref|XP_006351301.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
isoform X1 [Solanum tuberosum]
gi|565369357|ref|XP_006351302.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit B-like isoform X2
[Solanum tuberosum] gi|565369359|ref|XP_006351303.1|
PREDICTED: replication protein A 70 kDa DNA-binding
subunit B-like isoform X3 [Solanum tuberosum]
gi|565369361|ref|XP_006351304.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit B-like isoform X4
[Solanum tuberosum] gi|565369363|ref|XP_006351305.1|
PREDICTED: replication protein A 70 kDa DNA-binding
subunit B-like isoform X5 [Solanum tuberosum]
Length = 479
Score = 91.3 bits (225), Expect = 2e-15
Identities = 86/386 (22%), Positives = 160/386 (41%), Gaps = 17/386 (4%)
Frame = -3
Query: 2257 IPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNKFQKLILGDGMGHTLDAVIFHDNIDRF 2078
+ +N+I P T+DW C+V++++ + P+++ + FQ LIL D + V++ D I ++
Sbjct: 5 VNINQIEPATRDWICKVQIVEIARPRESLDKKCTFQNLILEDEEECQIKVVMYSDEIQQY 64
Query: 2077 KHVLQEGSVYMVKGAYVS-DPKQYKNPNVTCNYQWTFRRDTSV------MEGSNDSIPGC 1919
L+ + Y++ A V P Y P +QWT ++T + E P
Sbjct: 65 AATLKLLNTYLISTAKVKVSPSSYGKP--IHKFQWTLDKETVIEQIQASHEVEKPLPPPT 122
Query: 1918 KLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLIREYAAVDTELEPFV 1739
+L+ H + + I+ +++ P+ R + RE D + F+
Sbjct: 123 RLNITNFDRIP-HLMVDSAAEIDILAIVLR-CGPQKTAGRSHHR-CREITVCDDQRNQFL 179
Query: 1738 VTFWED---SVSDEIYAKMEPISNRTPLLLLNFSVVPYYGLSLSSNAQSIVLDDSEDDML 1568
T WED +I++KM ++ +L + + Y GLSL + S V + +
Sbjct: 180 FTLWEDFGEIEGHQIFSKMATEADLLVILGRSIGISTYQGLSLQTRYNSTVRVNPDYPQA 239
Query: 1567 IKLEKWKHENEEIINILVQSTDFFEKKVSHSPKQPL-------QMTTVKEILLTQENTHF 1409
+ L W EN+ +L+ S EK + S P+ Q ++ EI F
Sbjct: 240 MALINWAKENK---TMLLGSPS--EKTSTSSSITPMIVTPAGQQFISIAEISSAPSMGVF 294
Query: 1408 NVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVFD 1229
V+ + + +E+QD+ C C K +F C K + +F+ L+ D
Sbjct: 295 YVEAEMAILDEFQDFCVLECSGCKQKKRTKDRKDFECPKCNRKTSLVPRCTFQIDLI--D 352
Query: 1228 TTGQAEVCFLGKEAQKLLGLNPDEFY 1151
T + +KLL + + +
Sbjct: 353 NTATTTASISAELGEKLLSMTAKDIF 378
>ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
lyrata] gi|297317139|gb|EFH47561.1| hypothetical protein
ARALYDRAFT_325405 [Arabidopsis lyrata subsp. lyrata]
Length = 604
Score = 87.0 bits (214), Expect = 3e-14
Identities = 81/382 (21%), Positives = 158/382 (41%), Gaps = 10/382 (2%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P W RVRV K + +N+ + + L D G + A +F
Sbjct: 153 MTRRVHPLVSLNPYQGSWTIRVRVTNKGVMRTYNNARGEGCVFNVELTDEEGTQIQATMF 212
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDSIPG 1922
+ +F + G VY + +G+ KQ+K V +Y+ T ++ V E SN+ +
Sbjct: 213 NAAARKFYDRFEMGKVYYISRGSLKLANKQFKT--VQNDYEMTLNENSEVEEASNEEMFT 270
Query: 1921 CKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTELE 1748
++ F E +++ K LI+ V+ + + ++I R+ D
Sbjct: 271 PEIKFNFVPIDELGTYVNQKDLIDVIGVVQCVSPTMSIRRKNDNEMIPKRDITLADESKN 330
Query: 1747 PFVVTFWEDSVSDEIYAKMEPISNRTPLLLLNFSVVPYYGLSLSSNAQSIVLDDSEDDML 1568
VV+ W D + ++ N + + + V + G+SLS+ ++S V+ + +
Sbjct: 331 TVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGDFQGVSLSTISRSNVVINPDSPEA 390
Query: 1567 IKLEKW-----KHENEEIINILVQSTDFFEKKVSHSPKQPLQMTTVKEILLTQENTHFNV 1403
KL+ W K + I + S+ + +S + L T L ++ F++
Sbjct: 391 KKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSI 450
Query: 1402 KVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVFDTT 1223
+ Q +Y +C C+ K + + C KK + + + ++ V D+T
Sbjct: 451 RAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCEGCQ-KKDQECSLRYIMAVKVSDST 509
Query: 1222 GQAEVCFLGKEAQKLLGLNPDE 1157
G+ EA+K++G DE
Sbjct: 510 GETWFSAFNDEAEKIIGCTADE 531
>gb|EYU45429.1| hypothetical protein MIMGU_mgv1a002922mg [Mimulus guttatus]
Length = 625
Score = 86.3 bits (212), Expect = 6e-14
Identities = 84/398 (21%), Positives = 174/398 (43%), Gaps = 13/398 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P +W +VRV K + N+ + + L D G + A +F
Sbjct: 175 MTRRIHPLVSLNPYQGNWTIKVRVTGKGNMRSYKNARGEGCVFNVELTDEDGTQIQATMF 234
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
++ +F Q G VY + KG KQ+K V +Y+ T ++ V + +N+ I
Sbjct: 235 NEAAKKFFEKFQMGKVYYISKGTLKVANKQFKT--VQNDYEMTLNENSEVDQVNNEPSFI 292
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTE 1754
P K +F E +++ + L++ V+ + + + + I R+ D
Sbjct: 293 PPTKFNFVAID--ELGPYVNGRELVDVIGVVQSVTPTMNIRRKINNETIPKRDITIADAT 350
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLL-NFSVVPYYGLSLSSNAQSIVLDDSED 1577
+ VV+ W D ++ I ++ +S+++P++ + + V Y G+SLS+ ++S+++ + +
Sbjct: 351 KKTVVVSLWND-LATNIGQELLDMSDKSPVVAIKSLKVGDYQGVSLSAVSKSVIVVNPDS 409
Query: 1576 DMLIKLEKW-----KHENEEIINILVQSTDFFEKKVSHSPKQPLQMTTVKEILLTQENTH 1412
KL W K + I + + + +S + L T +L +
Sbjct: 410 PEAEKLRSWYDSEGKDTSMAAIGSGLSPSTNSGSRSMYSDRVSLSHITSNPLLGDDKPVF 469
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVF 1232
+ +K Q +Y +C C+ K G+ + C K + + + ++ V
Sbjct: 470 YCIKACISYIKHDQAMWYQACKTCNKKVTEAVGSGYWCEKCE-KNEQDCSLRYIMAVKVS 528
Query: 1231 DTTGQAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQSDF 1118
D +G+A + ++A+KLLG + DE + + +S +
Sbjct: 529 DGSGEAYLSVFNEQAEKLLGCSADELNELKSQEGESAY 566
>ref|XP_006287282.1| hypothetical protein CARUB_v10000503mg [Capsella rubella]
gi|482555988|gb|EOA20180.1| hypothetical protein
CARUB_v10000503mg [Capsella rubella]
Length = 607
Score = 85.1 bits (209), Expect = 1e-13
Identities = 78/382 (20%), Positives = 158/382 (41%), Gaps = 10/382 (2%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P W +VRV K + +N+ + + L D G + A +F
Sbjct: 156 MTRRVHPLVSLNPYQGSWTIKVRVTNKGVMRTYNNARGEGCVFNVELTDEEGTQIQATMF 215
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDSIPG 1922
+ +F ++G VY + +G+ KQ+K V +Y+ T ++ V E SN+ +
Sbjct: 216 NAAAKKFYDRFEQGKVYYISRGSLKLANKQFKT--VQNDYEMTLNENSEVEEASNEEMFT 273
Query: 1921 CKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTELE 1748
++ F E +++ K LI+ V+ + + + ++I R+ D +
Sbjct: 274 PEIKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKK 333
Query: 1747 PFVVTFWEDSVSDEIYAKMEPISNRTPLLLLNFSVVPYYGLSLSSNAQSIVLDDSEDDML 1568
VV+ W D + ++ N + + + V + G+SLS+ ++S V+ + +
Sbjct: 334 TVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGDFQGVSLSTISRSSVVINPDSPEA 393
Query: 1567 IKLEKW-----KHENEEIINILVQSTDFFEKKVSHSPKQPLQMTTVKEILLTQENTHFNV 1403
KL+ W K + I + S+ + +S + L L ++ F+
Sbjct: 394 TKLKSWYDSEGKETSMSTIGSGMSSSANNGSRSMYSDRVSLSHINSNPSLGEEKPVFFST 453
Query: 1402 KVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVFDTT 1223
+ Q +Y +C C+ K + + C KK + + + ++ V D+
Sbjct: 454 RAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCEGCQ-KKDQECSLRYIMAVKVSDSM 512
Query: 1222 GQAEVCFLGKEAQKLLGLNPDE 1157
G+ EA+K++G DE
Sbjct: 513 GETWFSAFNDEAEKIIGCTADE 534
>ref|NP_200908.1| replication protein A 70 kDa DNA-binding subunit D [Arabidopsis
thaliana] gi|75171651|sp|Q9FME0.1|RFA1D_ARATH RecName:
Full=Replication protein A 70 kDa DNA-binding subunit D;
Short=AtRPA70D; AltName: Full=AtRPA1-4; AltName:
Full=Replication factor A protein 1D; AltName:
Full=Replication protein A 1D; Short=AtRPA1D
gi|10177323|dbj|BAB10649.1| replication protein A1
[Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
putative RNA helicase [Arabidopsis thaliana]
gi|332010026|gb|AED97409.1| Replication factor-A protein
1-like protein [Arabidopsis thaliana]
Length = 629
Score = 84.7 bits (208), Expect = 2e-13
Identities = 86/385 (22%), Positives = 171/385 (44%), Gaps = 13/385 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P +W +VRV K + N+ + + L D G + A +F
Sbjct: 177 MTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMF 236
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
+D +F Q G VY + +G+ KQ+K V +Y+ T ++ V E S++ I
Sbjct: 237 NDAARKFFDRFQLGKVYYISRGSLKLANKQFKT--VQNDYEMTLNENSEVEEASSEEMFI 294
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTE 1754
P K +F E +++ K LI+ V+ + + R ++I R+ D
Sbjct: 295 PETKFNFVPIE--ELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADES 352
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLL-NFSVVPYYGLSLSSNAQSIVLDDSED 1577
+ VV+ W D ++ I ++ +++++P++ + + V + G+SLS+ ++S V+ + E
Sbjct: 353 RKTVVVSLWND-LATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPES 411
Query: 1576 DMLIKLEKW-KHENEEI----INILVQSTDFFEKKVSHSPKQPLQMTTVKEILLTQENTH 1412
KL+ W E +EI I + + + ++ + L T L ++
Sbjct: 412 PEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVF 471
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVF 1232
F+ + Q +Y +C C+ K + + C +K + + ++ V
Sbjct: 472 FSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQ-RKYEECSLRYIMAVKVT 530
Query: 1231 DTTGQAEVCFLGKEAQKLLGLNPDE 1157
D++G+ + EA+K+LG + DE
Sbjct: 531 DSSGETWISSFNDEAEKILGCSADE 555
>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 84.7 bits (208), Expect = 2e-13
Identities = 86/385 (22%), Positives = 171/385 (44%), Gaps = 13/385 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P +W +VRV K + N+ + + L D G + A +F
Sbjct: 179 MTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMF 238
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
+D +F Q G VY + +G+ KQ+K V +Y+ T ++ V E S++ I
Sbjct: 239 NDAARKFYDRFQLGKVYYISRGSLKLANKQFKT--VQNDYEMTLNENSEVEEASSEEMFI 296
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTE 1754
P K +F E +++ K LI+ V+ + + R ++I R+ D
Sbjct: 297 PETKFNFVPIE--ELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADES 354
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLL-NFSVVPYYGLSLSSNAQSIVLDDSED 1577
+ VV+ W D ++ I ++ +++++P++ + + V + G+SLS+ ++S V+ + E
Sbjct: 355 KKTVVVSLWND-LATGIGQELLDMADKSPVVAIKSLKVGDFQGVSLSTISRSNVVINPES 413
Query: 1576 DMLIKLEKW-KHENEEI----INILVQSTDFFEKKVSHSPKQPLQMTTVKEILLTQENTH 1412
KL+ W E +EI I + + + ++ + L T L ++
Sbjct: 414 PEAKKLKSWFDSEGKEISMSSIGSGMSPSSKNGSRSMYTDRVLLSHITSNPSLGEEKPVF 473
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVF 1232
F+ + Q +Y +C C+ K + + C KK + + ++ V
Sbjct: 474 FSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQ-KKYEECSLRYIMAVKVT 532
Query: 1231 DTTGQAEVCFLGKEAQKLLGLNPDE 1157
D++G+ + EA+K+LG + D+
Sbjct: 533 DSSGETWISSFNDEAEKILGCSADD 557
>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 84.7 bits (208), Expect = 2e-13
Identities = 82/402 (20%), Positives = 169/402 (42%), Gaps = 12/402 (2%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P +W +VR+ K + N+ + + L D G + A +F
Sbjct: 151 MTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMF 210
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDSIPG 1922
++ +F Q G VY + KGA KQ+K V +Y+ T ++ V E SN+
Sbjct: 211 NEAARKFYEKFQLGKVYYISKGALKVANKQFKT--VQNDYEMTLNENSEVEEASNEETFI 268
Query: 1921 CKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTELE 1748
+ FK E +++ K L++ V+ + + + ++ R+ D +
Sbjct: 269 PEAKFKFVEIEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKK 328
Query: 1747 PFVVTFWEDSVSDEIYAKMEPISNRTPLLLLNFSVVPYYGLSLSSNAQSIVLDDSEDDML 1568
VV+ W D ++ ++ + + + V + G+SLS+ ++SIVL + +
Sbjct: 329 TVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPES 388
Query: 1567 IKLEKWKHENEEIINILVQSTDFFEK-----KVSHSPKQPLQMTTVKEILLTQENTHFNV 1403
KL W + ++ +D K + + L T L + + F++
Sbjct: 389 KKLRSWYDSEGKGASMASIGSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSI 448
Query: 1402 KVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLM--VFD 1229
+ Q +Y +C C+ K G+ + C C+K S R+ ++ V D
Sbjct: 449 RAYISFIKPDQTMWYRACKTCNKKVTDAIGSGYWCEG--CQK-NDDECSLRYIMVVKVSD 505
Query: 1228 TTGQAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQSDFLKEQL 1103
+G+A + ++A+++ G + DE + + + + +++L
Sbjct: 506 ASGEAWLSLFNEQAERMFGCSADELDKLKSQEGEENLFQQKL 547
>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform 1
[Vitis vinifera]
Length = 625
Score = 84.7 bits (208), Expect = 2e-13
Identities = 82/402 (20%), Positives = 169/402 (42%), Gaps = 12/402 (2%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P +W +VR+ K + N+ + + L D G + A +F
Sbjct: 174 MTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMF 233
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDSIPG 1922
++ +F Q G VY + KGA KQ+K V +Y+ T ++ V E SN+
Sbjct: 234 NEAARKFYEKFQLGKVYYISKGALKVANKQFKT--VQNDYEMTLNENSEVEEASNEETFI 291
Query: 1921 CKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTELE 1748
+ FK E +++ K L++ V+ + + + ++ R+ D +
Sbjct: 292 PEAKFKFVEIEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKK 351
Query: 1747 PFVVTFWEDSVSDEIYAKMEPISNRTPLLLLNFSVVPYYGLSLSSNAQSIVLDDSEDDML 1568
VV+ W D ++ ++ + + + V + G+SLS+ ++SIVL + +
Sbjct: 352 TVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPES 411
Query: 1567 IKLEKWKHENEEIINILVQSTDFFEK-----KVSHSPKQPLQMTTVKEILLTQENTHFNV 1403
KL W + ++ +D K + + L T L + + F++
Sbjct: 412 KKLRSWYDSEGKGASMASIGSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSI 471
Query: 1402 KVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLM--VFD 1229
+ Q +Y +C C+ K G+ + C C+K S R+ ++ V D
Sbjct: 472 RAYISFIKPDQTMWYRACKTCNKKVTDAIGSGYWCEG--CQK-NDDECSLRYIMVVKVSD 528
Query: 1228 TTGQAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQSDFLKEQL 1103
+G+A + ++A+++ G + DE + + + + +++L
Sbjct: 529 ASGEAWLSLFNEQAERMFGCSADELDKLKSQEGEENLFQQKL 570
>ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana]
gi|75337075|sp|Q9SD82.1|RFA1B_ARATH RecName:
Full=Replication protein A 70 kDa DNA-binding subunit B;
Short=AtRPA70B; AltName: Full=AtRPA1-5; AltName:
Full=Replication factor A protein 1B; AltName:
Full=Replication protein A 1B; Short=AtRPA1B
gi|6562316|emb|CAB62614.1| replication factor A-like
protein [Arabidopsis thaliana]
gi|332003852|gb|AED91235.1| RPA70-kDa subunit B
[Arabidopsis thaliana]
Length = 604
Score = 84.7 bits (208), Expect = 2e-13
Identities = 80/382 (20%), Positives = 158/382 (41%), Gaps = 10/382 (2%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P W +VRV K + N+ + + L D G + A +F
Sbjct: 153 MTRRVHPLVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMF 212
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDSIPG 1922
+ +F + G VY + +G+ KQ+K V +Y+ T ++ V E SN+ +
Sbjct: 213 NAAARKFYDRFEMGKVYYISRGSLKLANKQFKT--VQNDYEMTLNENSEVEEASNEEMFT 270
Query: 1921 CKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTELE 1748
+ F E +++ K LI+ V+ + + + ++I R+ D +
Sbjct: 271 PETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKK 330
Query: 1747 PFVVTFWEDSVSDEIYAKMEPISNRTPLLLLNFSVVPYYGLSLSSNAQSIVLDDSEDDML 1568
VV+ W D + ++ N + + + V + G+SLS+ ++S V+ +
Sbjct: 331 TVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEA 390
Query: 1567 IKLEKW-----KHENEEIINILVQSTDFFEKKVSHSPKQPLQMTTVKEILLTQENTHFNV 1403
KL+ W K + I + S+ + +S + L T L ++ F+
Sbjct: 391 TKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFST 450
Query: 1402 KVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVFDTT 1223
+ Q +Y +C C+ K + + C S KK + + + ++ V D+T
Sbjct: 451 RAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCESCQ-KKDQECSLRYIMAVKVSDST 509
Query: 1222 GQAEVCFLGKEAQKLLGLNPDE 1157
G+ + EA+K++G D+
Sbjct: 510 GETWLSAFNDEAEKIIGCTADD 531
>ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 614
Score = 84.0 bits (206), Expect = 3e-13
Identities = 86/387 (22%), Positives = 172/387 (44%), Gaps = 15/387 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P +W +VRV K + N+ + + L D G + A +F
Sbjct: 164 MTRRIQPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 223
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
++ +F + G VY + KG KQ+K V +Y+ T ++ V E SN+ I
Sbjct: 224 NEAAKKFFDKFELGKVYYISKGTLRVANKQFKT--VQNDYEMTLNENSQVEEASNEEAFI 281
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTE 1754
P K +F E +++ + L++ V+ + + + + + R+ D
Sbjct: 282 PEIKFNFVPID--ELGPYVNGRELVDVIGVVQSVSPTMSIRRKSNNETVPKRDITIADET 339
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLL-NFSVVPYYGLSLSSNAQSIVLDDSED 1577
+ VV+ W D ++ + ++ +++++P++ + + V + GLSLS+ ++S ++ + +
Sbjct: 340 KKTVVVSLWND-LATHVGQELLDMADKSPVVAIKSLKVGDFQGLSLSALSKSNIVVNPDL 398
Query: 1576 DMLIKLEKW-----KHENEEIINILVQSTDFFEKKVSHSPKQPLQMTTVKEILLTQENTH 1412
KL W K + I + + + ++ + L T L ++
Sbjct: 399 PEAKKLRSWYDSEGKETSLASIGSGMSPSTKSGARSMYTDRVSLLHITSNLSLGEEKPVF 458
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRF--SLM 1238
F++K Q +Y +C C+ K FG+ + C C+K A S R+ +L
Sbjct: 459 FSLKAYISFIKPDQTMWYRACKTCNKKVTEAFGSGYWCEG--CQK-NDAECSLRYIMALR 515
Query: 1237 VFDTTGQAEVCFLGKEAQKLLGLNPDE 1157
V D +G+A + +A+K+LG + DE
Sbjct: 516 VSDASGEAWLSTFNDQAEKILGCSADE 542
>ref|XP_006394544.1| hypothetical protein EUTSA_v10003822mg [Eutrema salsugineum]
gi|557091183|gb|ESQ31830.1| hypothetical protein
EUTSA_v10003822mg [Eutrema salsugineum]
Length = 625
Score = 83.2 bits (204), Expect = 5e-13
Identities = 90/391 (23%), Positives = 167/391 (42%), Gaps = 19/391 (4%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P W +VRV K + N+ + + L D G + A +F
Sbjct: 176 MTRRVHPLVSLNPYQGSWTIKVRVTNKGPMRNYRNARGEGCVFNVELTDEEGTQIQATMF 235
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
+D +F Q G VY + +G+ KQ+K V +Y+ T ++ V E SN+ +
Sbjct: 236 NDAARKFYDRFQLGKVYFISRGSLKLANKQFKT--VQNDYEMTLNENSEVEEASNEEMFV 293
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTE 1754
P K +F E +++ K LI+ V+ + + R ++I R+ D
Sbjct: 294 PETKFNFVPIE--ELGLYVNQKELIDLIGVVQSVSPTISIRRRTDNEMIPKRDITLADES 351
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLL-NFSVVPYYGLSLSSNAQSIVLDDSED 1577
+ VV+ W D ++ I ++ +++++P++ + + V + G+SLS+ ++S V+ + E
Sbjct: 352 KKTVVVSLWND-LATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTISRSNVVINPES 410
Query: 1576 DMLIKLEKW-KHENEEIINILVQSTDFFEKKVSHSPKQPLQMTTVKEILLT--------- 1427
KL+ W E +E S +S S K +LL+
Sbjct: 411 PEAKKLKSWYDSEGKET------SMSSIGSGMSPSAKNGAWSMYTDRVLLSHITSNPSLG 464
Query: 1426 -QENTHFNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFR 1250
++ F+ + Q +Y +C C+ K A + C KK + +
Sbjct: 465 EEKPAFFSTRGYISFIKPDQTMWYQACKTCNKKVTEAIDAGYWCEGCQ-KKDEECSLRYI 523
Query: 1249 FSLMVFDTTGQAEVCFLGKEAQKLLGLNPDE 1157
+ V D+TG+A EA+K++G + DE
Sbjct: 524 MVVKVSDSTGEAWFSSFNDEAEKIIGCSADE 554
>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
Length = 604
Score = 82.8 bits (203), Expect = 6e-13
Identities = 88/387 (22%), Positives = 170/387 (43%), Gaps = 15/387 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P W +VRV K + N+ + + L D G + A +F
Sbjct: 153 MTRRIHPLVSLNPYQGIWTIKVRVTSKGNMRFYKNARGEGCVFNVELADQDGTEIQATMF 212
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
+ +F + G VY + KG KQ+K V +Y+ T ++ V E N++ +
Sbjct: 213 NQAARKFYDKFELGKVYYISKGTLRVANKQFKT--VQNDYEMTLNENSEVEEAINEAAFV 270
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTE 1754
P K +F E ++++ + L++ V+ + + ++I R+ D
Sbjct: 271 PETKFNFVAID--ELGSYVNGRELVDVIGVVQNVSSTMSIRRKSNNEMIPKRDITIADET 328
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLL-NFSVVPYYGLSLSSNAQSIVLDDSED 1577
+ VV+ W D ++ + ++ +++++P++ + + V + GLSLS+ +S VL + +
Sbjct: 329 KKTVVVSLWSD-LATNVGQELLDMADKSPVVAIRSVKVGDFQGLSLSAITRSTVLVNPDM 387
Query: 1576 DMLIKLEKWKH-ENEEIINILVQSTDFFEKK----VSHSPKQPLQMTTVKEILLTQENTH 1412
KL W E +E V S K +S + L T L +
Sbjct: 388 PEAKKLRSWYDCEGKETSLTSVGSGLSSSAKGVLWSMYSDRVSLLHITSNPNLGEDKPVF 447
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRF--SLM 1238
F++K Q +Y +C C+ K G+ + C C+K + S R+ ++
Sbjct: 448 FSIKANISFIKPEQAMWYRACKTCNKKVTEAIGSGYWCEG--CQK-NDTDCSLRYIVAMR 504
Query: 1237 VFDTTGQAEVCFLGKEAQKLLGLNPDE 1157
V DT+G+A + ++A+K++G + DE
Sbjct: 505 VSDTSGEAWLSVFNEQAEKIIGCSADE 531
>ref|XP_006358205.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Solanum tuberosum]
Length = 659
Score = 81.6 bits (200), Expect = 1e-12
Identities = 83/392 (21%), Positives = 155/392 (39%), Gaps = 14/392 (3%)
Frame = -3
Query: 2257 IPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNKFQKLILGDGMGHTLDAVIFHDNIDRF 2078
+ +++I P T+DW C++++I+ P+++ + FQ LIL D + AV++ D I ++
Sbjct: 221 VNIDQIEPATRDWICKIQIIEIGRPRESLDKKCTFQNLILEDEEQCQIKAVMYSDEIKQY 280
Query: 2077 KHVLQEGSVYMVKGAYVS-DPKQYKNPNVTCNYQWTFRRDTSVMEGSNDSIPGCKLSFKT 1901
L+ + Y++ A V Y P + W ++T + + L T
Sbjct: 281 AATLKLLNTYLISTAKVKLSTASYGKP--IHKFYWILDKETVIEQIKASHAVEKALPLPT 338
Query: 1900 TSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGK---LIREYAAVDTELEPFVVTF 1730
+ + + + +TA + I R + G+ RE D + F+ T
Sbjct: 339 KLNITSFDRIPHLMVDSTAEIDILAIVLRCGPQKNAGRSHHRCREITLCDNQRNQFLFTL 398
Query: 1729 WEDSVSDEIYAKMEPISNRTPLLLL---NFSVVPYYGLSLSSNAQSIVLDDSEDDMLIKL 1559
WED E + I+ LL++ + + Y GLSL + S V + + L
Sbjct: 399 WEDFGEIEGHEIASKIATEADLLVILGRSIGISTYQGLSLQTRYNSTVRVNPNYPQALAL 458
Query: 1558 EKWKHENEEIINILVQSTDFFEKKVSHSPKQPL-------QMTTVKEILLTQENTHFNVK 1400
W EN+ +L+ S EK + S P+ Q+ ++ +I V+
Sbjct: 459 LNWAKENK---TLLLHSPS--EKTSTSSSITPMIVTPAGQQLISIAKISSAPSMGLLYVE 513
Query: 1399 VKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLMVFDTTG 1220
+ + +E+QD+ C C K +F C + SF+ L+ D T
Sbjct: 514 AEMAILDEFQDFCVLECSGCKQKKRTKDRKDFECPKCNRTTSLVPRCSFQIDLI--DNTA 571
Query: 1219 QAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQS 1124
+ + LL + ++ + Y QS
Sbjct: 572 TTTASISAELGENLLSMTAEDIFDMTYTKRQS 603
>ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Solanum tuberosum]
Length = 614
Score = 81.3 bits (199), Expect = 2e-12
Identities = 88/415 (21%), Positives = 179/415 (43%), Gaps = 15/415 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P +W +VRV K + N+ + + L D G + A +F
Sbjct: 164 MTRRIQPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 223
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
++ +F + G VY + KG KQ+K V +Y+ T + V E N+ I
Sbjct: 224 NEAAKKFFDKFELGKVYYISKGTLRVANKQFKT--VQNDYEMTLNETSQVEEACNEEAFI 281
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTE 1754
P K +F E +++ + L++ V+ + + + + + R+ D
Sbjct: 282 PETKFNFVPID--ELGPYVNGRELVDVIGVVQSVSPTMSIRRKSNNETVPKRDITIADET 339
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLL-NFSVVPYYGLSLSSNAQSIVLDDSED 1577
+ VV+ W D ++ + ++ +++++P++ + + V + G+SLS+ ++S ++ + +
Sbjct: 340 KKTVVVSLWND-LATHVGQELLDMADKSPVVAIKSLKVGDFQGVSLSALSKSNIVVNPDL 398
Query: 1576 DMLIKLEKWKHENEEIINILVQSTDFFEKKVS-----HSPKQPLQMTTVKEILLTQENTH 1412
KL W + ++ + S ++ + L T L ++
Sbjct: 399 PEAKKLRSWYDSEGKETSLASIGSGMSPSAKSGARSMYTDRVSLLHITSNLSLGEEKPVF 458
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRF--SLM 1238
F++K Q +Y +C C+ K FG+ + C C+K A S R+ +L
Sbjct: 459 FSLKAYISFIKPDQTMWYRACKTCNKKVTEAFGSGYWCEG--CQKNE-AECSLRYIMALK 515
Query: 1237 VFDTTGQAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQSDFLKEQLCNVVLLLKIK 1073
V D +G+A + ++A+K+LG + DE D LK + + +K+K
Sbjct: 516 VSDASGEAWLSTFNEQAEKILGCSADEL----------DKLKSEEGEIAYQMKLK 560
>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223546255|gb|EEF47757.1| replication factor A 1, rfa1,
putative [Ricinus communis]
Length = 622
Score = 80.5 bits (197), Expect = 3e-12
Identities = 80/387 (20%), Positives = 166/387 (42%), Gaps = 15/387 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P +W +VRV K + N+ + + L D G + A +F
Sbjct: 172 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 231
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
++ +F Q G VY + KG+ KQ++ V +Y+ ++ V E S+++ I
Sbjct: 232 NEAARKFYDKFQLGKVYYISKGSLKVANKQFRT--VQNDYEMNLNENSQVEEASDEAAFI 289
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTE 1754
P K +F + ++ST L++ V+ + + + ++ R+ D
Sbjct: 290 PETKFNFVPID--QLGPYVSTNELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADET 347
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLLN-FSVVPYYGLSLSSNAQSIVLDDSED 1577
+ VV+ W D +D + ++ +++++P++ + V + G+SLS+ +SI+ + +
Sbjct: 348 KKTVVVSLWNDLATD-VGQELLDMADKSPVVAIKALKVGDFQGVSLSTLGRSIIQVNPDT 406
Query: 1576 DMLIKLEKWKHENEEIINILVQSTDFFEKKVS-----HSPKQPLQMTTVKEILLTQENTH 1412
KL+ W + ++ S +S + + T L + +
Sbjct: 407 PESKKLKSWFDSEGKETSLASVGAGLSPSTKSGGGSMYSDRVSISHITSNPSLGSDKPAF 466
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLM-- 1238
F+++ Q +Y +C C+ K G + C C+K A S R+ ++
Sbjct: 467 FSIRAYISFIKPDQSMWYRACKTCNKKVTEAIGGGYWCEG--CQK-NDAECSLRYIMVVK 523
Query: 1237 VFDTTGQAEVCFLGKEAQKLLGLNPDE 1157
V D +G+ V E ++++G + DE
Sbjct: 524 VSDASGEGWVSAFNNEGERIIGCSADE 550
>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 560
Score = 80.1 bits (196), Expect = 4e-12
Identities = 83/399 (20%), Positives = 175/399 (43%), Gaps = 15/399 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P DW +VRV K + N+ + ++L D G + A +F
Sbjct: 110 MTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMF 169
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
+D +F G VY V +G K++K V +Y+ T ++ V E SN++ +
Sbjct: 170 NDAARKFYEKFSLGKVYYVSRGTLKVANKKFK--TVQNDYEMTLNVNSQVDEVSNEAAFV 227
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVI--IADQEPRMVTVRGQGKLIREYAAVDTE 1754
P K +F H ++ + L++ V+ ++ + + R+ D
Sbjct: 228 PETKYNFVKIDMLGPH--VNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADET 285
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLLNF-SVVPYYGLSLSSNAQSIVLDDSED 1577
+ V++ W D ++ + ++ I++++P++ L + V + G+SLS+ ++S + + +
Sbjct: 286 KKTVVISLWND-LATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDI 344
Query: 1576 DMLIKLEKWKHENEEIINILVQSTDFFEKKVSHSPKQPLQMTTVKEILLT-----QENTH 1412
L W + +++ S+ S S ++ IL ++ T
Sbjct: 345 KEAHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTF 404
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLM-- 1238
F+++ Q +Y +C C+ K G+ + C + C+K S R+ ++
Sbjct: 405 FSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDN--CQK-NDEECSLRYIMVVR 461
Query: 1237 VFDTTGQAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQSD 1121
V D +G+A V +EA++++G + DE Q ++ + +
Sbjct: 462 VSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEEN 500
>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 603
Score = 80.1 bits (196), Expect = 4e-12
Identities = 83/399 (20%), Positives = 175/399 (43%), Gaps = 15/399 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P DW +VRV K + N+ + ++L D G + A +F
Sbjct: 153 MTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMF 212
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
+D +F G VY V +G K++K V +Y+ T ++ V E SN++ +
Sbjct: 213 NDAARKFYEKFSLGKVYYVSRGTLKVANKKFK--TVQNDYEMTLNVNSQVDEVSNEAAFV 270
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVI--IADQEPRMVTVRGQGKLIREYAAVDTE 1754
P K +F H ++ + L++ V+ ++ + + R+ D
Sbjct: 271 PETKYNFVKIDMLGPH--VNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADET 328
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLLNF-SVVPYYGLSLSSNAQSIVLDDSED 1577
+ V++ W D ++ + ++ I++++P++ L + V + G+SLS+ ++S + + +
Sbjct: 329 KKTVVISLWND-LATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDI 387
Query: 1576 DMLIKLEKWKHENEEIINILVQSTDFFEKKVSHSPKQPLQMTTVKEILLT-----QENTH 1412
L W + +++ S+ S S ++ IL ++ T
Sbjct: 388 KEAHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTF 447
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLM-- 1238
F+++ Q +Y +C C+ K G+ + C + C+K S R+ ++
Sbjct: 448 FSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDN--CQK-NDEECSLRYIMVVR 504
Query: 1237 VFDTTGQAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQSD 1121
V D +G+A V +EA++++G + DE Q ++ + +
Sbjct: 505 VSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEEN 543
>gb|EXC04889.1| Replication factor A protein 1 [Morus notabilis]
Length = 628
Score = 79.7 bits (195), Expect = 5e-12
Identities = 87/405 (21%), Positives = 176/405 (43%), Gaps = 15/405 (3%)
Frame = -3
Query: 2272 MEERLIPMNEILPGTKDWKCRVRVIKKSGPKQASNSPNK--FQKLILGDGMGHTLDAVIF 2099
M R+ P+ + P W +VRV K + N+ + + L D G + A +F
Sbjct: 178 MTRRVHPLVSLNPYQGSWMIKVRVTNKGTMRTYRNARGEGCVFNVELTDEDGTQIQATMF 237
Query: 2098 HDNIDRFKHVLQEGSVYMV-KGAYVSDPKQYKNPNVTCNYQWTFRRDTSVMEGSNDS--I 1928
++ +F Q G VY + KG KQ+K V +Y+ T ++ V E SN++ +
Sbjct: 238 NEAARKFYDKFQLGKVYYISKGTLKVANKQFKT--VQNDYEMTLNENSEVEEASNEAAFV 295
Query: 1927 PGCKLSFKTTSSCEFHNFLSTKTLINTACVIIADQEPRMVTVRGQGKLI--REYAAVDTE 1754
P K +F +++ K L++ V+ + + + + I R+ D
Sbjct: 296 PETKFNFVPIEM--LGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNENIPKRDITIADES 353
Query: 1753 LEPFVVTFWEDSVSDEIYAKMEPISNRTPLLLL-NFSVVPYYGLSLSSNAQSIVLDDSED 1577
+ VV+ W D ++ + ++ I++++P++ + + V + GLSLS+ ++S+V+ + +
Sbjct: 354 KKTVVVSLWND-LATNVGQELLDIADQSPVVAIKSVKVGDFQGLSLSALSRSMVVVNPDT 412
Query: 1576 DMLIKLEKWKHENEEIINILVQSTDFFEKKVS-----HSPKQPLQMTTVKEILLTQENTH 1412
KL+ W + + T S +S + L T L +
Sbjct: 413 PEANKLKSWYDSEGKGSPMASVGTGMSPSTRSGGRSMYSDRVFLSHITDNPSLGEDKPAF 472
Query: 1411 FNVKVKARLENEYQDYFYSSCPICSTKTVATFGAEFMCYSAPCKKMRIANRSFRFSLM-- 1238
F+++ Q +Y +C C+ K G+ + C C+K S R+ L+
Sbjct: 473 FSIRGYISSIKPDQTMWYRACKTCNKKVTEAIGSGYWCEG--CQK-NDEECSLRYILVVR 529
Query: 1237 VFDTTGQAEVCFLGKEAQKLLGLNPDEFYQKHYEMAQSDFLKEQL 1103
V D +G+A + +EA+ ++G + DE + ++ + + + +L
Sbjct: 530 VSDASGEAYISAFNEEAESIIGCSADELDKLRSQLGEENSYEMKL 574