BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00010401
         (1693 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU27528.1| hypothetical protein MIMGU_mgv1a007002mg [Mimulus...   685   0.0  
ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   621   e-175
emb|CBI21810.3| unnamed protein product [Vitis vinifera]              620   e-175
ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1...   619   e-174
ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1...   617   e-174
ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prun...   613   e-173
gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus not...   611   e-172
ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1...   608   e-171
ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phas...   607   e-171
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...   599   e-168
ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa...   598   e-168
ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citr...   597   e-168
ref|XP_007022303.1| RecA DNA recombination family protein isofor...   597   e-168
ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1...   595   e-167
ref|XP_006301561.1| hypothetical protein CARUB_v10021995mg [Caps...   595   e-167
ref|XP_004151021.1| PREDICTED: DNA repair protein recA homolog 1...   593   e-167
gb|AAA32855.1| replicase, partial [Arabidopsis thaliana]              593   e-167
ref|NP_565198.1| DNA repair protein recA-like 1 [Arabidopsis tha...   593   e-167
ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group] g...   593   e-167
ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1...   590   e-166

>gb|EYU27528.1| hypothetical protein MIMGU_mgv1a007002mg [Mimulus guttatus]
          Length = 423

 Score =  685 bits (1768), Expect = 0.0
 Identities = 352/423 (83%), Positives = 375/423 (88%), Gaps = 4/423 (0%)
 Frame = +2

Query: 119  MDLVFPLRTRYASPKPRNCSSA--TAPAPAPRGLLVQGC--RKSPKNVRVRSEFDAKLNG 286
            MDL FPL+T+  S K + CSS   +  +   RG L   C  R  PK +RVRSEFD K+NG
Sbjct: 1    MDLTFPLKTQCLSSKFKYCSSPAFSNASSLVRGFLDASCSSRIKPKLIRVRSEFDGKVNG 60

Query: 287  ALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGG 466
            ALSADFD RF+DRQKAL+AAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGG
Sbjct: 61   ALSADFDSRFVDRQKALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGG 120

Query: 467  GLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENL 646
            GLPKGRIVE+YGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDP+YSKSLGVDVENL
Sbjct: 121  GLPKGRIVEVYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKSLGVDVENL 180

Query: 647  IVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQA 826
            IVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQA
Sbjct: 181  IVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQA 240

Query: 827  LRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSV 1006
            LRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRP GKIKSV
Sbjct: 241  LRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPTGKIKSV 300

Query: 1007 KGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYS 1186
            KGDED+GL             PYKQAEFEI+FGEGISKLGCVLDC E+ DVVLKKGSWYS
Sbjct: 301  KGDEDIGLKVRVRVQKSKVSRPYKQAEFEIIFGEGISKLGCVLDCGEMTDVVLKKGSWYS 360

Query: 1187 YGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGSFAKSSSPHSDEEDVFQ 1366
            YG+HRLGQGR+RALQ+LKENPL+SEEIEKKVR A+TEG G  GS+AK S+P +D ED+FQ
Sbjct: 361  YGEHRLGQGRDRALQYLKENPLVSEEIEKKVRAAVTEGIGNGGSYAKPSAPQTDSEDMFQ 420

Query: 1367 EMQ 1375
            EMQ
Sbjct: 421  EMQ 423


>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Vitis vinifera]
          Length = 415

 Score =  621 bits (1601), Expect = e-175
 Identities = 320/416 (76%), Positives = 359/416 (86%), Gaps = 1/416 (0%)
 Frame = +2

Query: 131  FPLRTRYASPKPRNCSSATAPAPAPRGLLVQGCRKSPKNVRVRSEFDAKLNGALSADFDP 310
            FPL+T   S  P   SS+  P          G ++  + +R+R EF+ K+NGALS+D DP
Sbjct: 13   FPLKTLLPSAFP---SSSLPPH--------MGAKR--QQMRLRCEFEVKVNGALSSDPDP 59

Query: 311  RFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIV 490
            RFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIV
Sbjct: 60   RFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIV 119

Query: 491  EIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQPDNG 670
            EIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP+YSK+LGVDVENLIVCQPD+G
Sbjct: 120  EIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHG 179

Query: 671  EMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA 850
            EMALEIADR+CRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA
Sbjct: 180  EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA 239

Query: 851  SKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDVGL 1030
            SKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFAS+RLEIRPIGKIKS KGDED+GL
Sbjct: 240  SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKIKSSKGDEDIGL 299

Query: 1031 XXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYGDHRLGQ 1210
                         PYKQAEFEI+FGEG+SKLGC+LDCAE+ DVV+KKGSWYSYGD+RLGQ
Sbjct: 300  RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAELMDVVVKKGSWYSYGDNRLGQ 359

Query: 1211 GRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGSFAKSSSPHS-DEEDVFQEMQ 1375
            GR+RALQ+L+ENPL+  EIEK VR  + EG GQ+G+     SP S ++ED+ +E++
Sbjct: 360  GRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAPHVRLSPTSPEDEDILEEIR 415


>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  620 bits (1598), Expect = e-175
 Identities = 310/379 (81%), Positives = 345/379 (91%), Gaps = 1/379 (0%)
 Frame = +2

Query: 242  KNVRVRSEFDAKLNGALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVE 421
            + +R+R EF+ K+NGALS+D DPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVE
Sbjct: 6    QQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVE 65

Query: 422  TFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAF 601
            TFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAF
Sbjct: 66   TFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 125

Query: 602  DPSYSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEI 781
            DP+YSK+LGVDVENLIVCQPD+GEMALEIADR+CRSGA+DLIC+DSVSALTPRAEIEGEI
Sbjct: 126  DPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEI 185

Query: 782  GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFA 961
            GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFA
Sbjct: 186  GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 245

Query: 962  SVRLEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDC 1141
            S+RLEIRPIGKIKS KGDED+GL             PYKQAEFEI+FGEG+SKLGC+LDC
Sbjct: 246  SLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDC 305

Query: 1142 AEIFDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGSF 1321
            AE+ DVV+KKGSWYSYGD+RLGQGR+RALQ+L+ENPL+  EIEK VR  + EG GQ+G+ 
Sbjct: 306  AELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAP 365

Query: 1322 AKSSSPHS-DEEDVFQEMQ 1375
                SP S ++ED+ +E++
Sbjct: 366  HVRLSPTSPEDEDILEEIR 384


>ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Solanum tuberosum]
          Length = 419

 Score =  619 bits (1595), Expect = e-174
 Identities = 313/379 (82%), Positives = 339/379 (89%), Gaps = 1/379 (0%)
 Frame = +2

Query: 242  KNVRVRSEFDAKLNGALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVE 421
            + +RVRSEFD K+NG  S D D RFLDRQKAL+AAMNDINSSFGKGSVTRLGSAGGALVE
Sbjct: 41   RGIRVRSEFDHKINGTFSPDSDARFLDRQKALDAAMNDINSSFGKGSVTRLGSAGGALVE 100

Query: 422  TFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAF 601
            TFPSGCLTLDFALGGG+PKGRIVEIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAF
Sbjct: 101  TFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 160

Query: 602  DPSYSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEI 781
            DP+YSK+LGVDVENLIVCQPDNGEMALEIADR+CRSGAVDLICIDSVSALTPRAEIEGEI
Sbjct: 161  DPAYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEI 220

Query: 782  GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFA 961
            GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFA
Sbjct: 221  GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 280

Query: 962  SVRLEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDC 1141
            SVRLEIR  GKIKS KGDE+VG+             PYKQAEFEIMFGEG+SKLGCVLDC
Sbjct: 281  SVRLEIRSTGKIKSAKGDEEVGIKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDC 340

Query: 1142 AEIFDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGSF 1321
            AE+ +VV KKGSWY+YG+HRLGQGRE+ALQ+L+ENPL+SEEIEK VR ++ E +G +GS 
Sbjct: 341  AELIEVVAKKGSWYNYGEHRLGQGREKALQYLRENPLLSEEIEKMVRSSVLETTGFLGSS 400

Query: 1322 A-KSSSPHSDEEDVFQEMQ 1375
            + K   P   EED  QEMQ
Sbjct: 401  SLKHPLPQLLEEDALQEMQ 419


>ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Solanum lycopersicum]
          Length = 419

 Score =  617 bits (1591), Expect = e-174
 Identities = 313/377 (83%), Positives = 338/377 (89%), Gaps = 1/377 (0%)
 Frame = +2

Query: 248  VRVRSEFDAKLNGALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETF 427
            +RVRSEFD K+NGA S D D R LDRQKAL+AAMNDINSSFGKGSVTRLGSAGGALVETF
Sbjct: 43   IRVRSEFDHKINGAFSPDSDARILDRQKALDAAMNDINSSFGKGSVTRLGSAGGALVETF 102

Query: 428  PSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDP 607
            PSGCLTLDFALGGG+PKGRIVEIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP
Sbjct: 103  PSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 162

Query: 608  SYSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGM 787
            +YSK+LGVDVENLIVCQPDNGEMALEIADR+CRSGAVDLICIDSVSALTPRAEIEGEIGM
Sbjct: 163  AYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGM 222

Query: 788  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASV 967
            QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFASV
Sbjct: 223  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASV 282

Query: 968  RLEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAE 1147
            RLEIR  GKIKS KGDE+VG+             PYKQAEFEIMFGEG+SKLGCVLDCAE
Sbjct: 283  RLEIRSTGKIKSAKGDEEVGIKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAE 342

Query: 1148 IFDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGSFA- 1324
            + +VV KKGSWY+YG+HRLGQGRE+ALQ+L+ENPL+SEEIEK VR ++ E +G +GS + 
Sbjct: 343  LIEVVAKKGSWYNYGEHRLGQGREKALQYLRENPLLSEEIEKMVRSSVLETNGFLGSSSL 402

Query: 1325 KSSSPHSDEEDVFQEMQ 1375
            K   P   EED  QEMQ
Sbjct: 403  KHPLPQLLEEDALQEMQ 419


>ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prunus persica]
            gi|462411678|gb|EMJ16727.1| hypothetical protein
            PRUPE_ppa007080mg [Prunus persica]
          Length = 383

 Score =  613 bits (1582), Expect = e-173
 Identities = 307/377 (81%), Positives = 341/377 (90%), Gaps = 2/377 (0%)
 Frame = +2

Query: 251  RVRSEFDAKLNGALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP 430
            RVR E  AK+NGALSAD DPRF+DRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP
Sbjct: 8    RVRCELQAKVNGALSADSDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP 67

Query: 431  SGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPS 610
            SGCLTLD ALGGGLPKGRIVEI+GPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP+
Sbjct: 68   SGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 127

Query: 611  YSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQ 790
            YSK+LGVDVENLIVCQPD+GEMALEIADR+CRSGA+DLIC+DSVSALTPRAEIEGEIGMQ
Sbjct: 128  YSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 187

Query: 791  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVR 970
            QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 188  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 247

Query: 971  LEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEI 1150
            LEIR  GKIKSVKGDE++G+             PYKQAEFEI+FGEG+ KLGC+LDCAE 
Sbjct: 248  LEIRSTGKIKSVKGDEEIGVRVRVRVQKSKVSRPYKQAEFEIVFGEGVGKLGCILDCAET 307

Query: 1151 FDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGSFAKS 1330
             DVV+KKGSWYSYGDHRLGQGR++ALQ+L+ENPL+ +EIEK VR  +T+G+GQ+G+   S
Sbjct: 308  MDVVVKKGSWYSYGDHRLGQGRDKALQYLRENPLLLDEIEKIVRSMITDGTGQVGTLHTS 367

Query: 1331 S--SPHSDEEDVFQEMQ 1375
            +   P  DE+D F+++Q
Sbjct: 368  NLQIPQQDEDD-FEDIQ 383


>gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus notabilis]
          Length = 438

 Score =  611 bits (1575), Expect = e-172
 Identities = 319/422 (75%), Positives = 355/422 (84%), Gaps = 11/422 (2%)
 Frame = +2

Query: 143  TRYASPKPRNCSSATAPAPAPRGLLVQGCRKSPKNVR-VRSEFDAKLNGALSADFDPRFL 319
            TR+  P     SS+++ A + R   V     SP  +R +R EFDAK+NGAL  +FDPRFL
Sbjct: 21   TRFLPPSLYLPSSSSSSASSLRRRSVS----SPSAIRRIRCEFDAKINGALPGEFDPRFL 76

Query: 320  DRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIY 499
            DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLP+GRIVEIY
Sbjct: 77   DRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIY 136

Query: 500  GPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQPDNGEMA 679
            GPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP+YSK+LGVDVENLIVCQPD+GEMA
Sbjct: 137  GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMA 196

Query: 680  LEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA 859
            LEIADR+CRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA
Sbjct: 197  LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA 256

Query: 860  GCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDVGL--- 1030
             CTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFASVRLEIR  GKIKSVKGDE++GL   
Sbjct: 257  CCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEEIGLRVR 316

Query: 1031 ------XXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYG 1192
                               PYKQAEFEI+FGEG+SKLGCVLDCAEI DV+ KKGSWYSYG
Sbjct: 317  VRIQKSKKGINKFPSQVSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDVIAKKGSWYSYG 376

Query: 1193 DHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGSF-AKSSSPHSDEEDVFQE 1369
            DHRLGQGR+R+LQ+L+ENPL+ +EIEK VR  L EG+GQ G    +S S   ++EDV++E
Sbjct: 377  DHRLGQGRDRSLQYLRENPLLLDEIEKIVRSKLAEGTGQTGFLQPRSLSLPQEDEDVYEE 436

Query: 1370 MQ 1375
             Q
Sbjct: 437  SQ 438


>ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 418

 Score =  608 bits (1569), Expect = e-171
 Identities = 314/410 (76%), Positives = 349/410 (85%), Gaps = 10/410 (2%)
 Frame = +2

Query: 176  SSATAPAPAPRGLLVQGCR-------KSPKNVRVRSEFDAKLNGALS-ADFDPRFLDRQK 331
            SS T     P  LL   C        +S    RVRSE   K+NGALS AD D  FLDRQK
Sbjct: 10   SSMTHYMSTPTPLLFHSCSLPQRFNLQSMAAKRVRSELQVKVNGALSTADSDSLFLDRQK 69

Query: 332  ALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPES 511
            ALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEI+GPES
Sbjct: 70   ALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPES 129

Query: 512  SGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQPDNGEMALEIA 691
            SGKTTLALHAIAEVQRLGGNAMLVDAEHAFDP+YSK+LGVDVENLIVCQPD+GEMALEIA
Sbjct: 130  SGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIA 189

Query: 692  DRICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 871
            DR+CRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL
Sbjct: 190  DRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 249

Query: 872  IFLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDVGLXXXXXXX 1051
            IFLNQIR+KIGVYYGNPEVTSGGIALKFFASVRLEIR  GKIKSVKGDE++G+       
Sbjct: 250  IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEEIGVRVRVRVQ 309

Query: 1052 XXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYGDHRLGQGRERALQ 1231
                  PYKQAEFEI+FGEG+SKLGC+LDCAE+ DV++KKGSWYSYGDHRLGQGR+++LQ
Sbjct: 310  KSKVSRPYKQAEFEIVFGEGVSKLGCILDCAEMMDVIVKKGSWYSYGDHRLGQGRDKSLQ 369

Query: 1232 FLKENPLMSEEIEKKVRVALTEGSGQIGSFAKSSSP--HSDEEDVFQEMQ 1375
            +L+ENP++ +EIEK VR  +T+ +GQ+GSF     P  H DE+D F+++Q
Sbjct: 370  YLRENPVLLDEIEKIVRSTMTDATGQVGSFHTRHLPVTHQDEDD-FEDVQ 418


>ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phaseolus vulgaris]
            gi|561006319|gb|ESW05313.1| hypothetical protein
            PHAVU_011G169700g [Phaseolus vulgaris]
          Length = 415

 Score =  607 bits (1564), Expect = e-171
 Identities = 310/420 (73%), Positives = 352/420 (83%), Gaps = 1/420 (0%)
 Frame = +2

Query: 119  MDLVFPLRTRYASPKPRNCSSATAPAPAPRGLLVQGCRKSPKNVRVRSEFDAKLNGALSA 298
            MDL+FPL+      K    SS   P P     +      + K+  ++ E + + NGALS 
Sbjct: 1    MDLMFPLKPHSVILKAPLFSSLLFPLPLRFRAVT-----AFKHANIQCELEGRPNGALSG 55

Query: 299  DFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPK 478
            DFDPRF+DRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPK
Sbjct: 56   DFDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 115

Query: 479  GRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQ 658
            GRIVEI+GPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP+YSK+LGVDVENLIVCQ
Sbjct: 116  GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 175

Query: 659  PDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 838
            PD+GEMALEIADR+CRSGA+DLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKM
Sbjct: 176  PDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 235

Query: 839  SGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDE 1018
            SGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFAS+RLE+RP GKIKS KGDE
Sbjct: 236  SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPAGKIKSAKGDE 295

Query: 1019 DVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYGDH 1198
            ++GL             PYK AEFEI+FGEGISKLGC+LDCAE+ D+VLKKGSWYSYGDH
Sbjct: 296  EIGLKVRLRVQKSKVSRPYKLAEFEIIFGEGISKLGCILDCAEMTDIVLKKGSWYSYGDH 355

Query: 1199 RLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIG-SFAKSSSPHSDEEDVFQEMQ 1375
            RLGQGR++A+Q+LKEN  + EEIEK VR +L +GS Q   +  K+S    +++D+F+E Q
Sbjct: 356  RLGQGRDKAIQYLKENTNLLEEIEKVVRSSLVDGSNQASLAHMKNSPVLHEDDDIFEESQ 415


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Glycine max]
          Length = 414

 Score =  599 bits (1545), Expect = e-168
 Identities = 306/418 (73%), Positives = 349/418 (83%), Gaps = 1/418 (0%)
 Frame = +2

Query: 119  MDLVFPLRTRYASPKPRNCSSATAPAPAPRGLLVQGCRKSPKNVRVRSEFDAKLNGALSA 298
            MDL+FPL+      K    SS   P P     +      + K+  ++ E + + NGALS 
Sbjct: 1    MDLMFPLKPHCVILKAPLSSSLLFPFPLRFRAVT-----AFKHANIQCELEGRPNGALSG 55

Query: 299  DFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPK 478
            DFDPRF+DRQKALEAAMNDIN++FGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPK
Sbjct: 56   DFDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 115

Query: 479  GRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQ 658
            GRI+EIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP+YSK+LGVDVENLIVCQ
Sbjct: 116  GRIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 175

Query: 659  PDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 838
            PD+GEMALEIADR+CRSGA+DLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKM
Sbjct: 176  PDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 235

Query: 839  SGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDE 1018
            SGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFAS+RLE+RP GKIKS KGDE
Sbjct: 236  SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIKSAKGDE 295

Query: 1019 DVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYGDH 1198
            ++GL             PYK AEFEI+FGEGISKLGC+LDCAE+ D+V KKGSWYSYGDH
Sbjct: 296  EIGLKVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYSYGDH 355

Query: 1199 RLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGS-FAKSSSPHSDEEDVFQE 1369
            RLGQGR++A+Q+LKEN  + EEIEK VR +L +G+ Q      K+SS    ++D+F+E
Sbjct: 356  RLGQGRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPVHMKNSSVLHQDDDMFEE 413


>ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa]
            gi|550349661|gb|ERP67037.1| DNA repair protein recA
            [Populus trichocarpa]
          Length = 427

 Score =  598 bits (1542), Expect = e-168
 Identities = 301/383 (78%), Positives = 343/383 (89%), Gaps = 2/383 (0%)
 Frame = +2

Query: 230  RKSPKNVRVRSEFDAKLNGA-LSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAG 406
            +K PK +R   EFD+K+NG+ LS+D D RFLD+QKALEAAMNDIN+SFGKGSVTRLGSAG
Sbjct: 47   KKKPKEIRC--EFDSKVNGSPLSSDLDARFLDKQKALEAAMNDINNSFGKGSVTRLGSAG 104

Query: 407  GALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVD 586
            GALVETFPSGCLTLDFALGGGLPKGRIVEI+GPESSGKTTLALHAIAEVQ+ GG+AMLVD
Sbjct: 105  GALVETFPSGCLTLDFALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKFGGHAMLVD 164

Query: 587  AEHAFDPSYSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAE 766
            AEHAFDP+YSK+LGVDVENLIVCQPDNGEMALEIADR+CRSGAVDLIC+DSVSALTPRAE
Sbjct: 165  AEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAE 224

Query: 767  IEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIA 946
            IEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIA
Sbjct: 225  IEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIA 284

Query: 947  LKFFASVRLEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLG 1126
            LKFFASVRLEIR  GKIKSVKGDEDVG+             PYKQAEFEI+FGEG+S+LG
Sbjct: 285  LKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSQLG 344

Query: 1127 CVLDCAEIFDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSG 1306
            C+LDCAE+ DVV+KKGSWYSYGDHRLGQGR++ALQ+L++NP + EEIEKKVR  +T+G+ 
Sbjct: 345  CILDCAEMMDVVVKKGSWYSYGDHRLGQGRDKALQYLRDNPHLQEEIEKKVRSTMTDGTV 404

Query: 1307 QIGS-FAKSSSPHSDEEDVFQEM 1372
             +G+  A++      +E+V+ ++
Sbjct: 405  NMGTPQARNMPVPLQDENVYDDI 427


>ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citrus clementina]
            gi|557543284|gb|ESR54262.1| hypothetical protein
            CICLE_v10020181mg [Citrus clementina]
          Length = 440

 Score =  597 bits (1539), Expect = e-168
 Identities = 304/405 (75%), Positives = 344/405 (84%)
 Frame = +2

Query: 155  SPKPRNCSSATAPAPAPRGLLVQGCRKSPKNVRVRSEFDAKLNGALSADFDPRFLDRQKA 334
            S  P +C S+ +        L    RK  K  ++  EFD K+NG  S   D RFLDRQ+A
Sbjct: 38   SSSPLHCQSSRSRFFTASSKL-SAARKRDK--KISCEFDGKVNGFSSDSGDSRFLDRQRA 94

Query: 335  LEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESS 514
            L+AAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEI+GPESS
Sbjct: 95   LDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESS 154

Query: 515  GKTTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQPDNGEMALEIAD 694
            GKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPSYSK+LGVDVENLIVCQPDNGEMALEIAD
Sbjct: 155  GKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIAD 214

Query: 695  RICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLI 874
            R+CRSGA+DLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLI
Sbjct: 215  RMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLI 274

Query: 875  FLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDVGLXXXXXXXX 1054
            FLNQIR+KIGVYYGNPEVTSGGIALKFFASVRLEIR  GKIKSVKGDEDVG+        
Sbjct: 275  FLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQK 334

Query: 1055 XXXXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYGDHRLGQGRERALQF 1234
                 PYKQAEFEI+FGEG+SKLGC+LDCAE+ D+V++KG+WYSYGD RLGQGR++ALQ+
Sbjct: 335  SKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQY 394

Query: 1235 LKENPLMSEEIEKKVRVALTEGSGQIGSFAKSSSPHSDEEDVFQE 1369
            L++NPL+ EEIEK VR  +++GS   GSF ++ S  + EE++ +E
Sbjct: 395  LRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439


>ref|XP_007022303.1| RecA DNA recombination family protein isoform 1 [Theobroma cacao]
            gi|508721931|gb|EOY13828.1| RecA DNA recombination family
            protein isoform 1 [Theobroma cacao]
          Length = 485

 Score =  597 bits (1538), Expect = e-168
 Identities = 299/375 (79%), Positives = 335/375 (89%), Gaps = 1/375 (0%)
 Frame = +2

Query: 251  RVRSEFDAKLNGALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP 430
            +V  EF+ ++NGALS + D RFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP
Sbjct: 111  KVHCEFEPRVNGALSPNSDSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP 170

Query: 431  SGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPS 610
            SGCLTLD ALGGGLPKGRIVE+YGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP+
Sbjct: 171  SGCLTLDLALGGGLPKGRIVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 230

Query: 611  YSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQ 790
            YSK+LGVDVENLIVCQPDNGEMALEIADR+CRSGA+DLIC+DSVSALTPRAEIEGEIGMQ
Sbjct: 231  YSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 290

Query: 791  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVR 970
            QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 291  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 350

Query: 971  LEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEI 1150
            LEIRP GKIKSVKGDED+GL             PYKQAEFEI+FGEG+SKLGC+LDCAE+
Sbjct: 351  LEIRPSGKIKSVKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEM 410

Query: 1151 FDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGSF-AK 1327
             DVV+KKGSWYSYG+HRLGQGR++ALQ+L++NP++  EIEK VR  + +G+  + S   K
Sbjct: 411  MDVVVKKGSWYSYGEHRLGQGRDKALQYLRDNPVLHGEIEKIVRSMMADGTLHMSSAPVK 470

Query: 1328 SSSPHSDEEDVFQEM 1372
            S S    +E+ ++E+
Sbjct: 471  SLSLPPQDENNYEEI 485


>ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Citrus sinensis]
          Length = 440

 Score =  595 bits (1533), Expect = e-167
 Identities = 302/405 (74%), Positives = 344/405 (84%)
 Frame = +2

Query: 155  SPKPRNCSSATAPAPAPRGLLVQGCRKSPKNVRVRSEFDAKLNGALSADFDPRFLDRQKA 334
            S  P +C S+ +        L    RK  K  ++  EFD K+NG  S   D RFLDRQ+A
Sbjct: 38   SSSPLHCQSSRSRFFTASSKL-SAARKRDK--KISCEFDGKVNGFSSDSGDSRFLDRQRA 94

Query: 335  LEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESS 514
            L+AAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEI+GPESS
Sbjct: 95   LDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESS 154

Query: 515  GKTTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQPDNGEMALEIAD 694
            GKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP+YSK+LGVDVENLIVCQPDNGEMALEIAD
Sbjct: 155  GKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIAD 214

Query: 695  RICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLI 874
            R+CRSGA+DLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLI
Sbjct: 215  RMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLI 274

Query: 875  FLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDVGLXXXXXXXX 1054
            FLNQIR+KIGVYYGNPEVTSGGIALKFFASVRLEIR  GKIKSVKGDEDVG+        
Sbjct: 275  FLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQK 334

Query: 1055 XXXXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYGDHRLGQGRERALQF 1234
                 PYKQAEFEI+FGEG+SKLGC+LDCAE+ D+V++KG+WYSYGD RLGQGR++ALQ+
Sbjct: 335  SKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQY 394

Query: 1235 LKENPLMSEEIEKKVRVALTEGSGQIGSFAKSSSPHSDEEDVFQE 1369
            L++NPL+ EEIEK VR  +++GS   GSF ++ S  + +E++ +E
Sbjct: 395  LRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQDENILEE 439


>ref|XP_006301561.1| hypothetical protein CARUB_v10021995mg [Capsella rubella]
            gi|482570271|gb|EOA34459.1| hypothetical protein
            CARUB_v10021995mg [Capsella rubella]
          Length = 434

 Score =  595 bits (1533), Expect = e-167
 Identities = 306/382 (80%), Positives = 331/382 (86%), Gaps = 5/382 (1%)
 Frame = +2

Query: 245  NVRVRSEFDAKLNGALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVET 424
            N  + SEFD ++NGALS D D RFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVET
Sbjct: 53   NHNISSEFDDRINGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVET 112

Query: 425  FPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFD 604
            FPSG LTLD ALGGGLPKGR+VEIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFD
Sbjct: 113  FPSGILTLDLALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFD 172

Query: 605  PSYSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIG 784
            PSYSK+LGVDVENLIVCQPDNGEMALE ADR+CRSGAVDLIC+DSVSALTPRAEIEGEIG
Sbjct: 173  PSYSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIG 232

Query: 785  MQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFAS 964
            MQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFAS
Sbjct: 233  MQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS 292

Query: 965  VRLEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCA 1144
            VRLEIR  GKIKS KGDED+GL             PY+QAEFEIMFGEG++KLGCVLDCA
Sbjct: 293  VRLEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYRQAEFEIMFGEGVNKLGCVLDCA 352

Query: 1145 EIFDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEGSGQIGS-- 1318
            EI +VVLKKGSWYSY D RLGQGRE+ALQ L+ENP + E+IEKKVR+ + +G     +  
Sbjct: 353  EIMEVVLKKGSWYSYEDQRLGQGREKALQHLRENPSLQEDIEKKVRLLMLDGEVHRSTPL 412

Query: 1319 FAKSSSPHS---DEEDVFQEMQ 1375
             + SSSP S   +EED   + Q
Sbjct: 413  VSSSSSPGSHREEEEDSLDDFQ 434


>ref|XP_004151021.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Cucumis sativus]
          Length = 417

 Score =  593 bits (1530), Expect = e-167
 Identities = 301/397 (75%), Positives = 340/397 (85%), Gaps = 1/397 (0%)
 Frame = +2

Query: 188  APAPAPRGLLVQGCRKSPKNVR-VRSEFDAKLNGALSADFDPRFLDRQKALEAAMNDINS 364
            A +  PR  L      + K VR +R EF+  LNGALS DFDPR +DR+KALEAAMNDIN 
Sbjct: 23   AASSGPRQWLPSSLSNAGKRVRELRCEFEVNLNGALSGDFDPRSVDRKKALEAAMNDING 82

Query: 365  SFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAI 544
            SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEI+GPESSGKTTLALHAI
Sbjct: 83   SFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAI 142

Query: 545  AEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDL 724
            AEVQ+LGGNAMLVDAEHAFDP+YSK++GVDVENLIVCQPD+GEMALEIADR+CRSGAVDL
Sbjct: 143  AEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDL 202

Query: 725  ICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIG 904
            IC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIG
Sbjct: 203  ICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIG 262

Query: 905  VYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQA 1084
            VYYGNPEVTSGGIALKFFAS+RLEIR IGK+KS KGDE++G+             PYKQA
Sbjct: 263  VYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQA 322

Query: 1085 EFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEE 1264
            EFEI+FGEG+SKLGC+LDCAEI ++V+KKGSWYSYGD RLGQGR+RALQ+ K+NP + +E
Sbjct: 323  EFEIIFGEGVSKLGCILDCAEIMEIVVKKGSWYSYGDQRLGQGRDRALQYFKDNPALQDE 382

Query: 1265 IEKKVRVALTEGSGQIGSFAKSSSPHSDEEDVFQEMQ 1375
            IEK ++  LT G+ Q+G F     P  ++E V +E +
Sbjct: 383  IEKTLQTMLTSGTVQMG-FQSIRKPLPNQE-VLEEFE 417


>gb|AAA32855.1| replicase, partial [Arabidopsis thaliana]
          Length = 438

 Score =  593 bits (1530), Expect = e-167
 Identities = 302/373 (80%), Positives = 329/373 (88%), Gaps = 4/373 (1%)
 Frame = +2

Query: 251  RVRSEFDAKLNGALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP 430
            ++ SEFD ++NGALS D D RFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETF 
Sbjct: 58   KISSEFDDRINGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFS 117

Query: 431  SGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPS 610
            SG LTLD ALGGGLPKGR+VEIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP+
Sbjct: 118  SGILTLDLALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 177

Query: 611  YSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQ 790
            YSK+LGVDVENLIVCQPDNGEMALE ADR+CRSGAVDLIC+DSVSALTPRAEIEGEIGMQ
Sbjct: 178  YSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 237

Query: 791  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVR 970
            QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 238  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 297

Query: 971  LEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEI 1150
            LEIR  GKIKS KGDED+GL             PYKQAEFEIMFGEG+SKLGCVLDCAEI
Sbjct: 298  LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 357

Query: 1151 FDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEG----SGQIGS 1318
             +VV+KKGSWYSY D RLGQGRE+ALQ L+ENP + +EIEKKVR+ + +G    S  + S
Sbjct: 358  MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMS 417

Query: 1319 FAKSSSPHSDEED 1357
             + SS+ H +EE+
Sbjct: 418  SSSSSASHREEEE 430


>ref|NP_565198.1| DNA repair protein recA-like 1 [Arabidopsis thaliana]
            gi|2500098|sp|Q39199.1|RECAC_ARATH RecName: Full=DNA
            repair protein recA homolog 1, chloroplastic; AltName:
            Full=Recombinase A homolog 1; Flags: Precursor
            gi|289208|gb|AAA61781.1| chloroplast DNA repair protein
            precursor [Arabidopsis thaliana]
            gi|3152570|gb|AAC17051.1| Match to nuclear-encoded
            chloroplast DNA repair protein (E. coli recA homolog)
            gb|L15229 [Arabidopsis thaliana]
            gi|15292903|gb|AAK92822.1| putative replicase
            [Arabidopsis thaliana] gi|21281181|gb|AAM45008.1|
            putative replicase [Arabidopsis thaliana]
            gi|332198076|gb|AEE36197.1| DNA repair protein recA-like
            1 [Arabidopsis thaliana]
          Length = 439

 Score =  593 bits (1530), Expect = e-167
 Identities = 302/373 (80%), Positives = 329/373 (88%), Gaps = 4/373 (1%)
 Frame = +2

Query: 251  RVRSEFDAKLNGALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP 430
            ++ SEFD ++NGALS D D RFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETF 
Sbjct: 59   KISSEFDDRINGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFS 118

Query: 431  SGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPS 610
            SG LTLD ALGGGLPKGR+VEIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP+
Sbjct: 119  SGILTLDLALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 178

Query: 611  YSKSLGVDVENLIVCQPDNGEMALEIADRICRSGAVDLICIDSVSALTPRAEIEGEIGMQ 790
            YSK+LGVDVENLIVCQPDNGEMALE ADR+CRSGAVDLIC+DSVSALTPRAEIEGEIGMQ
Sbjct: 179  YSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 238

Query: 791  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRHKIGVYYGNPEVTSGGIALKFFASVR 970
            QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR+KIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 239  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 298

Query: 971  LEIRPIGKIKSVKGDEDVGLXXXXXXXXXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEI 1150
            LEIR  GKIKS KGDED+GL             PYKQAEFEIMFGEG+SKLGCVLDCAEI
Sbjct: 299  LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 358

Query: 1151 FDVVLKKGSWYSYGDHRLGQGRERALQFLKENPLMSEEIEKKVRVALTEG----SGQIGS 1318
             +VV+KKGSWYSY D RLGQGRE+ALQ L+ENP + +EIEKKVR+ + +G    S  + S
Sbjct: 359  MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMS 418

Query: 1319 FAKSSSPHSDEED 1357
             + SS+ H +EE+
Sbjct: 419  SSSSSASHREEEE 431


>ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
            gi|108710024|gb|ABF97819.1| DNA repair protein recA,
            chloroplast precursor, putative, expressed [Oryza sativa
            Japonica Group] gi|113549209|dbj|BAF12652.1| Os03g0639700
            [Oryza sativa Japonica Group]
            gi|215704578|dbj|BAG94211.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 418

 Score =  593 bits (1529), Expect = e-167
 Identities = 304/403 (75%), Positives = 339/403 (84%), Gaps = 1/403 (0%)
 Frame = +2

Query: 164  PRNCSSATAPAPAPRGLLVQGCRKSPKNVRVRSEFDAKL-NGALSADFDPRFLDRQKALE 340
            PR+     APAP+ R      C    +  R+R EF A   NGALS + DPR +DRQKAL+
Sbjct: 19   PRSRRKGRAPAPSARAT---ACGAVGRGRRLRCEFVAGGGNGALSGEDDPRLIDRQKALD 75

Query: 341  AAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGK 520
            AAMNDINSSFGKGSVTRLGSAGGA VETFPSGCLTLDFALGGGLPKGR+VE+YGPESSGK
Sbjct: 76   AAMNDINSSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGK 135

Query: 521  TTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQPDNGEMALEIADRI 700
            TTLALHAIAEVQ+LGGNAMLVDAEHAFDP+YSK+LGVD+ENLIVCQPDNGEMALEIADR+
Sbjct: 136  TTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRM 195

Query: 701  CRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFL 880
            CRSGA+DLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL+FL
Sbjct: 196  CRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFL 255

Query: 881  NQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDVGLXXXXXXXXXX 1060
            NQIR+KIGV+YGNPEVTSGGIALKFFASVRLEIRPIGKIKS KGDEDVG+          
Sbjct: 256  NQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSAKGDEDVGVKVRVRVQKSK 315

Query: 1061 XXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYGDHRLGQGRERALQFLK 1240
               PYKQAEFEI+FGEG+SKLGCVLDCAE+ +VV KKGSWYSY + RLGQGRE+ALQ+L+
Sbjct: 316  VSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKEMRLGQGREKALQYLR 375

Query: 1241 ENPLMSEEIEKKVRVALTEGSGQIGSFAKSSSPHSDEEDVFQE 1369
            E+P + +EIEK VR  + EG+  +   A   S  ++EE V  E
Sbjct: 376  ESPTICDEIEKAVRAMIPEGARHMSLLAFGRSSLTEEEQVDDE 418


>ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            isoform 1 [Brachypodium distachyon]
          Length = 412

 Score =  590 bits (1522), Expect = e-166
 Identities = 306/408 (75%), Positives = 346/408 (84%), Gaps = 4/408 (0%)
 Frame = +2

Query: 158  PKPRNCSSAT-APAPAPRGLLVQGCRKSPKNVRVRSEFDAKL-NGALSADFDPRFLDRQK 331
            P+PR   SAT A A    G          +  R+R EF A + NGALS + DPR +DRQK
Sbjct: 16   PRPRRRVSATRASASGTTG----------RGRRLRCEFVASVGNGALSGEDDPRLIDRQK 65

Query: 332  ALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPES 511
            AL+AAMNDIN+SFGKGSVTRLGSAGGA VETFPSGCLTLDFALGGGLPKGR+VE+YGPES
Sbjct: 66   ALDAAMNDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPES 125

Query: 512  SGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPSYSKSLGVDVENLIVCQPDNGEMALEIA 691
            SGKTTLALHAIAE+Q+LGGNAMLVDAEHAFDP+YSK+LGVD+ENLIVCQPDNGEMALEIA
Sbjct: 126  SGKTTLALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIA 185

Query: 692  DRICRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 871
            DR+CRSGA+DLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL
Sbjct: 186  DRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 245

Query: 872  IFLNQIRHKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDVGLXXXXXXX 1051
            +FLNQIR+KIGV+YGNPEVTSGGIALKFFASVRLEIR IGKIKS KGDEDVG+       
Sbjct: 246  MFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRHIGKIKSAKGDEDVGVKVRVRVQ 305

Query: 1052 XXXXXXPYKQAEFEIMFGEGISKLGCVLDCAEIFDVVLKKGSWYSYGDHRLGQGRERALQ 1231
                  PYKQAEFEIMFGEG+SKLGC+LDCAE+ +VV KKGSWYSY D RLGQGRE+ALQ
Sbjct: 306  KSKVSRPYKQAEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYKDIRLGQGREKALQ 365

Query: 1232 FLKENPLMSEEIEKKVRVALTEGSGQIG--SFAKSSSPHSDEEDVFQE 1369
            +L+E+P + +EIEK VR  + EG+  +   +F +SSSP ++EE+V+ E
Sbjct: 366  YLRESPTICDEIEKVVRAMIPEGTRHMTLLAFGQSSSP-TEEEEVYDE 412