BLASTX nr result

ID: Mentha29_contig00008860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00008860
         (713 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004494826.1| PREDICTED: 39S ribosomal protein L46, mitoch...    48   8e-09
ref|XP_004494827.1| PREDICTED: 39S ribosomal protein L46, mitoch...    48   8e-09
ref|NP_172914.1| protein decoy [Arabidopsis thaliana] gi|2202254...    43   2e-08
ref|NP_001154338.1| protein decoy [Arabidopsis thaliana] gi|3321...    43   2e-08
ref|XP_004510692.1| PREDICTED: 39S ribosomal protein L46, mitoch...    45   2e-08
ref|XP_002892819.1| hypothetical protein ARALYDRAFT_888845 [Arab...    42   4e-08
ref|XP_003629838.1| 39S ribosomal protein L46 [Medicago truncatu...    45   6e-08
gb|AAB48039.1| decoy [Arabidopsis thaliana] gi|1931612|gb|AAB515...    42   2e-07
ref|XP_006857649.1| hypothetical protein AMTR_s00061p00143360 [A...    40   1e-06

>ref|XP_004494826.1| PREDICTED: 39S ribosomal protein L46, mitochondrial-like isoform X1
           [Cicer arietinum]
          Length = 235

 Score = 48.1 bits (113), Expect(2) = 8e-09
 Identities = 43/113 (38%), Positives = 49/113 (43%), Gaps = 38/113 (33%)
 Frame = +2

Query: 350 SLARPLVTAARGFGTSSVGGEKTIAGVLFERLPVV------------------SSDGSRS 475
           SL RPL+T  RGF TSS   EK +A VLFERLPVV                       R 
Sbjct: 11  SLIRPLLTK-RGFSTSS---EKMVAAVLFERLPVVIPKIDPIVYAFQEFSFRWRQQYQRR 66

Query: 476 IDESILNR--------------------YCQKNLKERSLQRALDQRLYLLMTG 574
             +  L+R                       KN   RSLQRALD+RLYLL+ G
Sbjct: 67  YPDEFLDRSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLIYG 119



 Score = 38.5 bits (88), Expect(2) = 8e-09
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +1

Query: 571 WHFPEKVYKSEPTLCK*L*CVKSALESVV 657
           WHFPEK+Y+SE T+ K   C +SAL+SV+
Sbjct: 131 WHFPEKLYESEETMRK---CAESALKSVI 156


>ref|XP_004494827.1| PREDICTED: 39S ribosomal protein L46, mitochondrial-like isoform X2
           [Cicer arietinum]
          Length = 228

 Score = 48.1 bits (113), Expect(2) = 8e-09
 Identities = 43/113 (38%), Positives = 49/113 (43%), Gaps = 38/113 (33%)
 Frame = +2

Query: 350 SLARPLVTAARGFGTSSVGGEKTIAGVLFERLPVV------------------SSDGSRS 475
           SL RPL+T  RGF TSS   EK +A VLFERLPVV                       R 
Sbjct: 4   SLIRPLLTK-RGFSTSS---EKMVAAVLFERLPVVIPKIDPIVYAFQEFSFRWRQQYQRR 59

Query: 476 IDESILNR--------------------YCQKNLKERSLQRALDQRLYLLMTG 574
             +  L+R                       KN   RSLQRALD+RLYLL+ G
Sbjct: 60  YPDEFLDRSDARGKGDYQIDYVPAPRVTEADKNNDRRSLQRALDRRLYLLIYG 112



 Score = 38.5 bits (88), Expect(2) = 8e-09
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +1

Query: 571 WHFPEKVYKSEPTLCK*L*CVKSALESVV 657
           WHFPEK+Y+SE T+ K   C +SAL+SV+
Sbjct: 124 WHFPEKLYESEETMRK---CAESALKSVI 149


>ref|NP_172914.1| protein decoy [Arabidopsis thaliana] gi|22022540|gb|AAM83228.1|
           At1g14620/T5E21_15 [Arabidopsis thaliana]
           gi|24111323|gb|AAN46785.1| At1g14620/T5E21_15
           [Arabidopsis thaliana] gi|332191070|gb|AEE29191.1|
           protein decoy [Arabidopsis thaliana]
          Length = 233

 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = +1

Query: 571 WHFPEKVYKSEPTLCK*L*CVKSALESVV 657
           WHFPEKVY SEPTL K   C +SAL+SVV
Sbjct: 129 WHFPEKVYDSEPTLRK---CAESALKSVV 154



 Score = 42.4 bits (98), Expect(2) = 2e-08
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 38/115 (33%)
 Frame = +2

Query: 344 LRSLARPLVTAARGFGTSSVGGEKTIAGVLFERLPVVSSDGSRSI----------DESIL 493
           LR LA+PL+ + RGF TSS   +K +A VLFERL VV      ++           +   
Sbjct: 6   LRLLAKPLLESRRGFCTSS---DKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFR 62

Query: 494 NRY----------------------------CQKNLKERSLQRALDQRLYLLMTG 574
            RY                              KN   +SL RALD++LYLL+ G
Sbjct: 63  RRYPDEFLDIAKNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFG 117


>ref|NP_001154338.1| protein decoy [Arabidopsis thaliana] gi|332191071|gb|AEE29192.1|
           protein decoy [Arabidopsis thaliana]
          Length = 220

 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = +1

Query: 571 WHFPEKVYKSEPTLCK*L*CVKSALESVV 657
           WHFPEKVY SEPTL K   C +SAL+SVV
Sbjct: 129 WHFPEKVYDSEPTLRK---CAESALKSVV 154



 Score = 42.4 bits (98), Expect(2) = 2e-08
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 38/115 (33%)
 Frame = +2

Query: 344 LRSLARPLVTAARGFGTSSVGGEKTIAGVLFERLPVVSSDGSRSI----------DESIL 493
           LR LA+PL+ + RGF TSS   +K +A VLFERL VV      ++           +   
Sbjct: 6   LRLLAKPLLESRRGFCTSS---DKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFR 62

Query: 494 NRY----------------------------CQKNLKERSLQRALDQRLYLLMTG 574
            RY                              KN   +SL RALD++LYLL+ G
Sbjct: 63  RRYPDEFLDIAKNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFG 117


>ref|XP_004510692.1| PREDICTED: 39S ribosomal protein L46, mitochondrial-like [Cicer
           arietinum]
          Length = 233

 Score = 45.4 bits (106), Expect(2) = 2e-08
 Identities = 42/113 (37%), Positives = 49/113 (43%), Gaps = 38/113 (33%)
 Frame = +2

Query: 350 SLARPLVTAARGFGTSSVGGEKTIAGVLFERLPVV------------------------- 454
           SL RPL+T  RGF TSS   +K +A VLFERLPVV                         
Sbjct: 9   SLIRPLLTR-RGFSTSS---DKMVAAVLFERLPVVIPKVDPVVYAFQEFSFRWRMQYQRR 64

Query: 455 -----------SSDGSRSIDESILNRYCQKNLK--ERSLQRALDQRLYLLMTG 574
                         G   ID     R  + + K   RSLQRALD+RLYLL+ G
Sbjct: 65  YPDEFLDRSDARGKGDYQIDYVPAPRITEADKKNDRRSLQRALDKRLYLLLYG 117



 Score = 39.7 bits (91), Expect(2) = 2e-08
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +1

Query: 571 WHFPEKVYKSEPTLCK*L*CVKSALESVV 657
           WHFPEKVY+SE T+ K   C +SAL+SV+
Sbjct: 129 WHFPEKVYESEETMRK---CAESALKSVI 154


>ref|XP_002892819.1| hypothetical protein ARALYDRAFT_888845 [Arabidopsis lyrata subsp.
           lyrata] gi|297338661|gb|EFH69078.1| hypothetical protein
           ARALYDRAFT_888845 [Arabidopsis lyrata subsp. lyrata]
          Length = 233

 Score = 42.4 bits (98), Expect(2) = 4e-08
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 38/115 (33%)
 Frame = +2

Query: 344 LRSLARPLVTAARGFGTSSVGGEKTIAGVLFERLPVVSSDGSRSI----------DESIL 493
           LR LA+PL+ + RGF TSS   +K +A VLFERL VV      ++           +   
Sbjct: 6   LRLLAKPLLESKRGFCTSS---DKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFR 62

Query: 494 NRY----------------------------CQKNLKERSLQRALDQRLYLLMTG 574
            RY                              KN   +SL RALD++LYLL+ G
Sbjct: 63  RRYPDEFLDIAKNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFG 117



 Score = 42.0 bits (97), Expect(2) = 4e-08
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = +1

Query: 571 WHFPEKVYKSEPTLCK*L*CVKSALESVV 657
           WHFPEKVY SEPTL K   C +SAL+SV+
Sbjct: 129 WHFPEKVYDSEPTLRK---CAESALKSVL 154


>ref|XP_003629838.1| 39S ribosomal protein L46 [Medicago truncatula]
           gi|355523860|gb|AET04314.1| 39S ribosomal protein L46
           [Medicago truncatula]
          Length = 279

 Score = 44.7 bits (104), Expect(2) = 6e-08
 Identities = 41/115 (35%), Positives = 48/115 (41%), Gaps = 38/115 (33%)
 Frame = +2

Query: 344 LRSLARPLVTAARGFGTSSVGGEKTIAGVLFERLPVV------------------SSDGS 469
           + SL RPL+   RGF TSS   EK +A VLFERLPVV                       
Sbjct: 53  MMSLVRPLLMR-RGFSTSS---EKMVASVLFERLPVVIPKIDPNVYAFQEFSFRWRQQYQ 108

Query: 470 RSIDESILNR--------------------YCQKNLKERSLQRALDQRLYLLMTG 574
           R   +  L+R                       K    RSLQRALD+RLYLL+ G
Sbjct: 109 RRYPDEFLDRSDARGKGDYQIDYVPAPRITEADKQNDRRSLQRALDRRLYLLLFG 163



 Score = 38.9 bits (89), Expect(2) = 6e-08
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +1

Query: 571 WHFPEKVYKSEPTLCK*L*CVKSALESVV 657
           WHFPEKVY+SE T+ K   C +SAL+SV+
Sbjct: 175 WHFPEKVYESEDTMRK---CAESALKSVL 200


>gb|AAB48039.1| decoy [Arabidopsis thaliana] gi|1931612|gb|AAB51588.1| decoy
           [Arabidopsis thaliana]
          Length = 210

 Score = 42.4 bits (98), Expect(2) = 2e-07
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 38/115 (33%)
 Frame = +2

Query: 344 LRSLARPLVTAARGFGTSSVGGEKTIAGVLFERLPVVSSDGSRSI----------DESIL 493
           LR LA+PL+ + RGF TSS   +K +A VLFERL VV      ++           +   
Sbjct: 6   LRLLAKPLLESRRGFCTSS---DKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFR 62

Query: 494 NRY----------------------------CQKNLKERSLQRALDQRLYLLMTG 574
            RY                              KN   +SL RALD++LYLL+ G
Sbjct: 63  RRYPDEFLDIAKNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFG 117



 Score = 39.3 bits (90), Expect(2) = 2e-07
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +1

Query: 571 WHFPEKVYKSEPTLCK*L*CVKSALESVV 657
           W FPEKVY SEPTL K   C +SAL+SVV
Sbjct: 129 WPFPEKVYDSEPTLRK---CAESALKSVV 154


>ref|XP_006857649.1| hypothetical protein AMTR_s00061p00143360 [Amborella trichopoda]
           gi|548861745|gb|ERN19116.1| hypothetical protein
           AMTR_s00061p00143360 [Amborella trichopoda]
          Length = 233

 Score = 40.4 bits (93), Expect(2) = 1e-06
 Identities = 36/110 (32%), Positives = 41/110 (37%), Gaps = 38/110 (34%)
 Frame = +2

Query: 362 PLVTAARGFGTSSVGGEKTIAGVLFERLPVV----------------------------- 454
           PL     G G  +   EK +A VLFERLPVV                             
Sbjct: 9   PLSLRKLGLGFCTSSSEKILASVLFERLPVVIPKIDPLVYAFQEFAFRWRQQYGRQYPDE 68

Query: 455 -------SSDGSRSIDESILNRYCQ--KNLKERSLQRALDQRLYLLMTGT 577
                     G   ID     R  +  K    RSLQRALD+RLYLL+ GT
Sbjct: 69  VLGKADARGKGDYQIDYQPAPRITEADKTNDRRSLQRALDRRLYLLLYGT 118



 Score = 38.5 bits (88), Expect(2) = 1e-06
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = +1

Query: 571 WHFPEKVYKSEPTLCK*L*CVKSALESVV 657
           WHFPEKVY +E TL K   C +SAL+SV+
Sbjct: 129 WHFPEKVYGTEETLRK---CAESALQSVI 154


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