BLASTX nr result
ID: Mentha29_contig00008711
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha29_contig00008711 (1622 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s... 457 e-126 ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s... 456 e-125 gb|EYU39326.1| hypothetical protein MIMGU_mgv1a008161mg [Mimulus... 400 e-109 emb|CBI22720.3| unnamed protein product [Vitis vinifera] 396 e-107 ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s... 390 e-106 ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr... 382 e-103 ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot... 371 e-100 ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s... 366 2e-98 ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s... 360 1e-96 gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor... 359 2e-96 ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s... 358 4e-96 ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s... 348 5e-93 ref|XP_002872419.1| RNA polymerase III subunit RPC82 family prot... 347 7e-93 ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei... 345 4e-92 ref|XP_002875937.1| RNA polymerase III subunit RPC82 family prot... 340 1e-90 ref|XP_006404191.1| hypothetical protein EUTSA_v10010290mg [Eutr... 337 1e-89 ref|NP_566914.1| RNA polymerase III subunit RPC82 family protein... 335 4e-89 ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phas... 335 5e-89 ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s... 334 8e-89 gb|AAM62793.1| RNA polymerase III subunit-like protein [Arabidop... 334 8e-89 >ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum tuberosum] Length = 525 Score = 457 bits (1175), Expect = e-126 Identities = 245/444 (55%), Positives = 319/444 (71%), Gaps = 6/444 (1%) Frame = +1 Query: 37 TLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDR--ERQKTG 210 T YM LFDNIIHKLR KF++IV EE+G++C I GL+QHGRL+ +II+R E K G Sbjct: 83 TQYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEGLLQHGRLTLTEIIERYKEASKQG 142 Query: 211 NIDVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVEQKTIEQRA 390 + D F L++AR+VERCPA P L P A E AKKRG SAKI Q T+EQ+A Sbjct: 143 DSSADAARDSFNSLVNARFVERCPAPDPLLEPPAAEETAAKKRGAKSAKIQAQ-TMEQQA 201 Query: 391 LAAAAPMESVRFLME--MDDISEEKEESTKSPILGRKRKKDALDSD-EDVLDRKIEVLWR 561 LAAAAPMES+RFL+E +D E ++ T G KRK+ L+S+ +D K EVLWR Sbjct: 202 LAAAAPMESMRFLVEDIWNDSVERADKRTTDVKCGMKRKQGDLESNTKDSATGKKEVLWR 261 Query: 562 VNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYD 741 NFEEF+RRL HKAC++ VK +NN+A++VL+A L+LS SET+ + S S+N IYD Sbjct: 262 ANFEEFIRRLRHKACVANVKVRVNNDAAVVLAATLELSRHSETKLRIDNSVPQSINAIYD 321 Query: 742 EVIKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVESMILKRY 921 EVIK++GG+GMDLER++ SL LGC+ ++DE+YS+D+K+II++A+ EEVES++LKRY Sbjct: 322 EVIKREGGLGMDLERIRASLDDLGCEAPLMEIDETYSVDLKNIIEQARIEEVESIVLKRY 381 Query: 922 GEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRPP 1101 G EAYR+FR LS+A R VETDKIS+ TFVEKK KILF+LWKD+YL M+ + A + Sbjct: 382 GREAYRMFRLLSKADRLVETDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARAAKQS 441 Query: 1102 AFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKL-EPLRDKLKVY 1278 F +WK+++Q E LDEMYHA LNLRLRITHE++Q KE+LQ+PKDKL L +K Sbjct: 442 EFILWKINKQSLWEHILDEMYHAALNLRLRITHEKEQEKEILQMPKDKLVGELGNKYMRL 501 Query: 1279 RIVRTTLERSLMDLDDAIVLFHHF 1350 R V LE SLM+LDD+++LFH F Sbjct: 502 RKVCIVLESSLMNLDDSLMLFHDF 525 >ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum lycopersicum] Length = 525 Score = 456 bits (1173), Expect = e-125 Identities = 247/444 (55%), Positives = 321/444 (72%), Gaps = 6/444 (1%) Frame = +1 Query: 37 TLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQ--KTG 210 T YM LFDNIIHKLR KF++IV EELG++C IL L+QHGRLS QII + +Q K G Sbjct: 83 TQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWLLQHGRLSLSQIIVKYKQASKQG 142 Query: 211 NIDVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVEQKTIEQRA 390 + D F RL++AR+VERCPA P L P A E AKKRG SAKI Q T+EQ+A Sbjct: 143 DSSADAAQDSFNRLVNARFVERCPAPDPLLEPPAEEETAAKKRGAKSAKIQAQ-TMEQQA 201 Query: 391 LAAAAPMESVRFLME--MDDISEEKEESTKSPILGRKRKKDALDSD-EDVLDRKIEVLWR 561 LAAAAPMES+RFL+E +D E+ ++ T G KRK++ L+S+ +D + EVLWR Sbjct: 202 LAAAAPMESMRFLVENIWNDSVEKADKRTTDVKCGMKRKQEDLESNTKDPATGEKEVLWR 261 Query: 562 VNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYD 741 NFEEF+RRL HKAC++ VK +NN+A+IVL+A L+LS SET+ + S S+N IYD Sbjct: 262 ANFEEFIRRLRHKACVANVKVRVNNDAAIVLAATLELSRHSETKLRIDNSVPQSINAIYD 321 Query: 742 EVIKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVESMILKRY 921 EVIK++GG+GMDLER++ SL LGC+ ++DE+YS+D+K+II++A+ EEVES++LKRY Sbjct: 322 EVIKREGGLGMDLERIRASLDDLGCEAPLMEIDETYSVDLKNIIEQARIEEVESIVLKRY 381 Query: 922 GEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRPP 1101 G EAYR+FR LS+A R VETDKIS+ TFVEKK KILF+LWKD+YL M+ + A + Sbjct: 382 GREAYRMFRLLSKADRLVETDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARAPKQS 441 Query: 1102 AFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKL-EPLRDKLKVY 1278 F +WK+++Q E LDEMYHA LNLRLR THE++Q KE+LQ+PKDKL L +K Sbjct: 442 EFILWKINKQSLWEHILDEMYHAALNLRLRTTHEKEQEKEILQMPKDKLVGELGNKYMRL 501 Query: 1279 RIVRTTLERSLMDLDDAIVLFHHF 1350 R V LE SLM+LDD+++LFH F Sbjct: 502 RKVCIVLESSLMNLDDSLMLFHDF 525 >gb|EYU39326.1| hypothetical protein MIMGU_mgv1a008161mg [Mimulus guttatus] Length = 383 Score = 400 bits (1028), Expect = e-109 Identities = 214/372 (57%), Positives = 279/372 (75%), Gaps = 2/372 (0%) Frame = +1 Query: 241 FKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVEQKTIEQRALAAAAPMESV 420 F +L++AR+VE CPA P L P VV+ KK+ T VE+ ++QR LAAAAPMES+ Sbjct: 20 FTKLVNARFVEHCPAPDPHLEP-PVVDEKGKKKKTQ----VEEPPLDQRVLAAAAPMESM 74 Query: 421 RFLMEMDDISEEK-EESTKSPILGRKRKKDALDSDEDVLDRKIEVLWRVNFEEFLRRLLH 597 RF +EMDD SEEK E+T S G+KRK+D + D D +K EVLWRVN EEFLRRL H Sbjct: 75 RFFLEMDDHSEEKGNETTTSVRSGQKRKQDEGELDAD---KKKEVLWRVNVEEFLRRLRH 131 Query: 598 KACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYDEVIKQDGGVGMD 777 KACI++VK+ IN EA+IVLSA+L+LS +SE+ AEKS YLS+N IYDEVIK++GG+GMD Sbjct: 132 KACIAHVKSKINEEAAIVLSAMLELSKQSESGLKAEKSEYLSINAIYDEVIKKEGGLGMD 191 Query: 778 LERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLS 957 ERV++ L QLGC+TLST MDESY IDIK II+ +QNEEVES++++RYG EAYRI+R LS Sbjct: 192 FERVRSLLDQLGCETLSTGMDESYCIDIKEIIELSQNEEVESLVMRRYGPEAYRIYRLLS 251 Query: 958 RAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHF 1137 +AGR +ET+KIS++TFVEKK T IL++LWKD++L M+ + + F +W ++++ Sbjct: 252 KAGRLMETEKISDSTFVEKKATIAILYKLWKDDFLQMEHVKTSTAKQSDFRLWTINKEQL 311 Query: 1138 RERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKL-EPLRDKLKVYRIVRTTLERSLM 1314 +++ L+EMYHA LNL+LRI HE+DQ KEV++LPKDKL K + V LE LM Sbjct: 312 QKQVLNEMYHAALNLKLRIAHEKDQAKEVIKLPKDKLVGESNTKYVRWANVTRILESCLM 371 Query: 1315 DLDDAIVLFHHF 1350 DLDDAI+LFHHF Sbjct: 372 DLDDAIMLFHHF 383 >emb|CBI22720.3| unnamed protein product [Vitis vinifera] Length = 524 Score = 396 bits (1018), Expect = e-107 Identities = 220/444 (49%), Positives = 309/444 (69%), Gaps = 6/444 (1%) Frame = +1 Query: 37 TLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRER--QKTG 210 T YM LF NI+H++R KF+ IV EEL ++C IL GL+QHGRL+ +QI+DR + Q G Sbjct: 83 TQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQSEG 142 Query: 211 NIDVQ-VVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVEQ-KTIEQ 384 VQ + + F +L+ A +VERCPAS P L+P + E PA+KRG SAK+VE+ +TIEQ Sbjct: 143 EPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEETPARKRGAKSAKLVEEPQTIEQ 202 Query: 385 RALAAAAPMESVRFLMEMDDISEEKEESTKSPILGRKRKKDALDSDEDV-LDRKIEVLWR 561 RA+AAAAPM++ RF + ++ ++ + + + G KRK+DAL+ D++ + +VLWR Sbjct: 203 RAIAAAAPMDAKRFSVIINTGTDV--DDSPNVTAGEKRKQDALELDKETGASCEKDVLWR 260 Query: 562 VNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYD 741 NFEEF+R L HKACI+ VKT +++ A+IVLSA+L+ + E + E S LS++ I++ Sbjct: 261 ANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFE 320 Query: 742 EVIKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVESMILKRY 921 V+K + G M LERV+ SL QLGC ESYS+D+K+II+ AQN+EVES+ LKRY Sbjct: 321 GVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAESYSVDLKNIIELAQNDEVESITLKRY 380 Query: 922 GEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRPP 1101 G +AYRIFR LS++ R +ETDKIS+ TFVEKK TAKIL+QLWKDEYL M+ + +R Sbjct: 381 GRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQS 440 Query: 1102 AFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDK-LEPLRDKLKVY 1278 F +WKV + L+EMYH+ LNL LR+ +E +Q +E++QLP++K + L ++ + Sbjct: 441 QFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELEQEQEIIQLPREKRVGALGNRFERL 500 Query: 1279 RIVRTTLERSLMDLDDAIVLFHHF 1350 R VR LE SLM LDDAI+LF+ F Sbjct: 501 RKVRILLESSLMKLDDAIMLFNDF 524 >ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis vinifera] Length = 511 Score = 390 bits (1003), Expect = e-106 Identities = 218/442 (49%), Positives = 305/442 (69%), Gaps = 4/442 (0%) Frame = +1 Query: 37 TLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQKTGNI 216 T YM LF NI+H++R KF+ IV EEL ++C IL GL+QHGRL+ +QI+DR + Sbjct: 78 TQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQREP 137 Query: 217 DVQ-VVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVEQ-KTIEQRA 390 VQ + + F +L+ A +VERCPAS P L+P + E PA+KRG SAK+VE+ +TIEQRA Sbjct: 138 VVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEETPARKRGAKSAKLVEEPQTIEQRA 197 Query: 391 LAAAAPMESVRFLMEMDDISEEKEESTKSPILGRKRKKDALDSDEDV-LDRKIEVLWRVN 567 +AAAAPM++ RF + ++ ++ + SP RK+DAL+ D++ + +VLWR N Sbjct: 198 IAAAAPMDAKRFSVIINTGTDVDD----SP----NRKQDALELDKETGASCEKDVLWRAN 249 Query: 568 FEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYDEV 747 FEEF+R L HKACI+ VKT +++ A+IVLSA+L+ + E + E S LS++ I++ V Sbjct: 250 FEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGV 309 Query: 748 IKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVESMILKRYGE 927 +K + G M LERV+ SL QLGC ESYS+D+K+II+ AQN+EVES+ LKRYG Sbjct: 310 MKSEAGRSMTLERVRGSLIQLGCAPCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGR 369 Query: 928 EAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRPPAF 1107 +AYRIFR LS++ R +ETDKIS+ TFVEKK TAKIL+QLWKDEYL M+ + +R F Sbjct: 370 DAYRIFRLLSKSCRLLETDKISDTTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQF 429 Query: 1108 YVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDK-LEPLRDKLKVYRI 1284 +WKV + L+EMYH+ LNL LR+ +E +Q +E++QLP++K + L ++ + R Sbjct: 430 LLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELEQEQEIIQLPREKRVGALGNRFERLRK 489 Query: 1285 VRTTLERSLMDLDDAIVLFHHF 1350 VR LE SLM LDDAI+LF+ F Sbjct: 490 VRILLESSLMKLDDAIMLFNDF 511 >ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina] gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform X1 [Citrus sinensis] gi|557523806|gb|ESR35173.1| hypothetical protein CICLE_v10004721mg [Citrus clementina] Length = 527 Score = 382 bits (981), Expect = e-103 Identities = 211/450 (46%), Positives = 301/450 (66%), Gaps = 7/450 (1%) Frame = +1 Query: 22 GAPKNTLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRER- 198 G NT Y+VLFDNI+H++R KF+ I+ +E + C ++ GL++HGRL+ Q+ DR + Sbjct: 78 GPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKS 137 Query: 199 -QKTGN-IDVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAK-IVEQ 369 +K GN +D+ + + +L++A YVERCPAS P L P + E PA+K+G+ SAK I E Sbjct: 138 SEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEEGPARKKGSKSAKKIGEP 197 Query: 370 KTIEQRALAAAAPMESVRFLMEMDDISE--EKEESTKSPILGRKRKKDALDSDEDVLDRK 543 +TIEQ+ + AA PME++RF + + S+ EKE+++ + G KRK D L+ DE + + Sbjct: 198 ETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTPGEKRKHDVLELDECGVADE 257 Query: 544 IEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLS 723 V++R NFE F+RRL HK CI +V+ +++ A+ VLSA+L + +E + + S LS Sbjct: 258 QSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLS 317 Query: 724 VNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVES 903 ++ IY+EVIK + G M L+ V+ SL QLG + +SYSID + II+ AQNEEVES Sbjct: 318 LSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDASSDSYSIDFEKIIEIAQNEEVES 377 Query: 904 MILKRYGEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMP 1083 ++ KRYG +AYRIFR LS++GR +ETDKIS+ TFVEKK KIL++LWKD YL M+ + Sbjct: 378 VVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKDAPKILYKLWKDGYLLMEKLVV 437 Query: 1084 NANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDK-LEPLR 1260 R F +WKV++Q + LDEM+HA LNL LR+++E D+ KE+L LP DK PL+ Sbjct: 438 TGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVSYELDREKELLNLPADKRTGPLQ 497 Query: 1261 DKLKVYRIVRTTLERSLMDLDDAIVLFHHF 1350 D+ R VR LE S M LDDAI+LFH F Sbjct: 498 DRYNRIRKVRILLESSQMKLDDAILLFHDF 527 >ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1 [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1 [Theobroma cacao] Length = 523 Score = 371 bits (952), Expect = e-100 Identities = 210/453 (46%), Positives = 290/453 (64%), Gaps = 10/453 (2%) Frame = +1 Query: 22 GAPKNTLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQ 201 GA N+ Y+ LF+NIIH+ R KF+ IV ++L + C ++ L+ HGRL+ Q+ DR + Sbjct: 78 GAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEALLLHGRLTLKQMSDRAKS 137 Query: 202 KTGNID---VQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVEQK 372 D + V + F +LL+A +VERCPA+ P L+ E A+KR SAKI+E K Sbjct: 138 AQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEEETSARKRVPKSAKILEGK 197 Query: 373 -TIEQRALAAAAPMESVRFLM----EMDDISEEKEESTKSPILGRKRKKDALDSDED--V 531 T+EQR L AA P E++RFL+ E + E ++ S +G+KRK DAL+S+ + Sbjct: 198 ETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNSSSMTVGKKRKLDALESETEGEA 257 Query: 532 LDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKS 711 D ++ VLWR NFEEF+RRL HKA I V+ +++ A IV+SA+L+ + +E + E S Sbjct: 258 TDEQV-VLWRANFEEFIRRLRHKAFIENVRACLDDGAVIVISAMLEATRTAEKKVKTENS 316 Query: 712 PYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNE 891 LS+N IY+EVIK + G + +RV+ SL QL C ++ESYSID K II+ AQN+ Sbjct: 317 VPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVKAVNESYSIDFKKIIELAQND 376 Query: 892 EVESMILKRYGEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQ 1071 EVES++LKRYG +AYR+FR LS R +ETDKI++ FVEKK T KIL++LWKD+YLHM+ Sbjct: 377 EVESIVLKRYGRDAYRMFRLLSSTARLLETDKIADTAFVEKKDTTKILYKLWKDDYLHME 436 Query: 1072 GFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKLE 1251 R F +WKV++ E LDEM+HA LNL LR+ HE +Q KE+L LP+DK Sbjct: 437 KLQLTGARQSQFLLWKVNKNTLWEHVLDEMFHAALNLSLRVAHELEQEKELLNLPQDK-- 494 Query: 1252 PLRDKLKVYRIVRTTLERSLMDLDDAIVLFHHF 1350 ++ R VR LE S M LDDAI+LFH F Sbjct: 495 ----RVNRLRKVRLLLESSQMKLDDAIMLFHDF 523 >ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform X2 [Citrus sinensis] Length = 512 Score = 366 bits (939), Expect = 2e-98 Identities = 206/450 (45%), Positives = 294/450 (65%), Gaps = 7/450 (1%) Frame = +1 Query: 22 GAPKNTLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRER- 198 G NT Y+VLFDNI+H++R KF+ I+ +E + C ++ GL++HGRL+ Q+ DR + Sbjct: 78 GPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKS 137 Query: 199 -QKTGN-IDVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAK-IVEQ 369 +K GN +D+ + + +L++A YVERCPAS P L P + E PA+K+G+ SAK I E Sbjct: 138 SEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEEGPARKKGSKSAKKIGEP 197 Query: 370 KTIEQRALAAAAPMESVRFLMEMDDISE--EKEESTKSPILGRKRKKDALDSDEDVLDRK 543 +TIEQ+ + AA PME++RF + + S+ EKE+++ + G KRK D L+ DE + + Sbjct: 198 ETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTPGEKRKHDVLELDECGVADE 257 Query: 544 IEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLS 723 V++R NFE F+RRL HK CI +V+ +++ A+ VLSA+L + +E + + S LS Sbjct: 258 QSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLS 317 Query: 724 VNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVES 903 ++ IY+EVIK + G M L+ V+ SL QL D + II+ AQNEEVES Sbjct: 318 LSSIYEEVIKSEAGRNMTLDHVRASLVQL---------------DFEKIIEIAQNEEVES 362 Query: 904 MILKRYGEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMP 1083 ++ KRYG +AYRIFR LS++GR +ETDKIS+ TFVEKK KIL++LWKD YL M+ + Sbjct: 363 VVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKDAPKILYKLWKDGYLLMEKLVV 422 Query: 1084 NANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDK-LEPLR 1260 R F +WKV++Q + LDEM+HA LNL LR+++E D+ KE+L LP DK PL+ Sbjct: 423 TGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVSYELDREKELLNLPADKRTGPLQ 482 Query: 1261 DKLKVYRIVRTTLERSLMDLDDAIVLFHHF 1350 D+ R VR LE S M LDDAI+LFH F Sbjct: 483 DRYNRIRKVRILLESSQMKLDDAILLFHDF 512 >ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis sativus] Length = 518 Score = 360 bits (923), Expect = 1e-96 Identities = 205/449 (45%), Positives = 297/449 (66%), Gaps = 7/449 (1%) Frame = +1 Query: 25 APKN-TLYMVLFDNIIHKLRATKFMQIVLEELGED--CRGILYGLIQHGRLSFDQIIDRE 195 APK+ TLY+ LF NI+H++R +KF+ I ++LG+D C+ +L GL+Q+GRLS +Q+++R Sbjct: 74 APKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERA 133 Query: 196 RQKTGNIDVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVE-QK 372 + I VV D +LL+A +VERCPA P+LSP V EPP +KRG +AKI E + Sbjct: 134 ESRNHPIS-DVVHDSLFKLLNAHFVERCPAPEPTLSPK-VEEPPPRKRGAKAAKISEVPE 191 Query: 373 TIEQRALAAAAPMESVRFLMEMDDISEEKEESTK-SPILGRKRKKDALDSDEDVLDRKIE 549 T+EQR + AA P+E +RF M D + E E+S S I G+KRK D L+ +D D Sbjct: 192 TLEQRLIEAARPVEVLRF--SMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGP 249 Query: 550 VLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVN 729 +LWR N++EF+R L HKACI +V++ ++ VLSA+L+ + SE E + LS++ Sbjct: 250 ILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLD 309 Query: 730 DIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYS-IDIKSIIQKAQNEEVESM 906 +IY+EV+K + G M L+RV+ SL LGC + ++ +D II++AQ +EVES+ Sbjct: 310 NIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKISMFTTVDFSMIIEQAQTDEVESI 369 Query: 907 ILKRYGEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPN 1086 +LKRYG +AYR+FR LS+ G VET+KIS+++FV+K KIL++LWKDEYL+M+ Sbjct: 370 VLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALT 429 Query: 1087 ANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKD-KLEPLRD 1263 R +W+VD+ + E LDEMYHA LNL+LR+ HE ++ KE+L LPKD +PL Sbjct: 430 VPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVK 489 Query: 1264 KLKVYRIVRTTLERSLMDLDDAIVLFHHF 1350 K+ + VR L SL+ LDDA++LFH F Sbjct: 490 KMHHFENVRNLLRSSLVKLDDALMLFHDF 518 >gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis] Length = 564 Score = 359 bits (922), Expect = 2e-96 Identities = 217/492 (44%), Positives = 300/492 (60%), Gaps = 52/492 (10%) Frame = +1 Query: 31 KNTLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQKTG 210 K T Y+VLFDNI+H+LR KF++IV EEL ++C IL GL+QHGRL+ +QI +R R Sbjct: 80 KVTQYLVLFDNILHRLRFPKFLEIVSEELDKNCGEILEGLLQHGRLTLEQIYERARD--- 136 Query: 211 NIDVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVE-QKTIEQR 387 N V + F++LL++R+VERCPA P + P + + KRG SAK+ E +T EQR Sbjct: 137 NAVQDAVRESFQKLLNSRFVERCPAPEPFVEPSTIKS--SNKRGAKSAKLDEVSETEEQR 194 Query: 388 ALAAAAPMESVRFLM---EMDDISEEKEE--STKSPILGRKRKKDALDSDEDVLDRKIEV 552 LAAAA ++++RF + + E+K++ S+ S +G KRK A DSD+ + EV Sbjct: 195 VLAAAASLDTLRFSILTPSGTEFDEDKKDGDSSSSMGVGEKRKHGAADSDDAFGSNENEV 254 Query: 553 -LWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVN 729 LWR NFEEF R L HKACI V+ ++ A+ VL A+LD + +E + E S LS++ Sbjct: 255 ILWRANFEEFTRYLRHKACIENVRARLDVGAATVLKAMLDATRSAEKKVKTENSVSLSMD 314 Query: 730 DIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVESMI 909 I++EV+K + G + L+RV+ SL QLGC + TD ++YSID+K II+ AQ EEVES++ Sbjct: 315 TIFEEVMKSEAGRSLTLDRVRASLVQLGCSSSGTD--DTYSIDLKQIIELAQKEEVESIV 372 Query: 910 LKRYGEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQ------ 1071 L+RYG +AYR+FR LS+AG ETDKI++ TFVEKK KIL +LWKDEYLHM+ Sbjct: 373 LRRYGRDAYRMFRLLSKAGLLQETDKIADMTFVEKKEAPKILGKLWKDEYLHMEVEYFNL 432 Query: 1072 --GFMPNAN------------------------------------RPPAFYVWKVDQQHF 1137 F ++N R FY+WKV++ Sbjct: 433 LIKFTLSSNMAICDVVDKPRLTLSGMSDLVLMDQNKEIVNKFVVDRNTTFYLWKVNKPIL 492 Query: 1138 RERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDK-LEPLRDKLKVYRIVRTTLERSLM 1314 + LDEMYHA LNL LR+ HE DQ+KE+L +P +K PL + K + + LE SLM Sbjct: 493 WQHVLDEMYHAALNLSLRVIHELDQKKELLTIPPEKRTGPLEKEFKRLKNAKFFLESSLM 552 Query: 1315 DLDDAIVLFHHF 1350 LDDA++LF HF Sbjct: 553 KLDDALMLFRHF 564 >ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis sativus] Length = 518 Score = 358 bits (919), Expect = 4e-96 Identities = 202/445 (45%), Positives = 294/445 (66%), Gaps = 6/445 (1%) Frame = +1 Query: 34 NTLYMVLFDNIIHKLRATKFMQIVLEELGED--CRGILYGLIQHGRLSFDQIIDRERQKT 207 +TLY+ LF NI+H++R +KF+ I ++LG+D C+ +L GL+Q+GRLS +Q+++R + Sbjct: 78 DTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESRN 137 Query: 208 GNIDVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVE-QKTIEQ 384 I VV D +LL+A +VERCPA P+LSP V EPP +KRG +AKI E +T+EQ Sbjct: 138 HPIS-DVVHDSLFKLLNAHFVERCPAPEPTLSPK-VEEPPPRKRGAKAAKISEVPETLEQ 195 Query: 385 RALAAAAPMESVRFLMEMDDISEEKEESTK-SPILGRKRKKDALDSDEDVLDRKIEVLWR 561 R + AA P+E +RF M D + E E+S S I G+KRK D L+ +D D +LWR Sbjct: 196 RLIEAARPVEVLRF--SMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWR 253 Query: 562 VNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYD 741 N++EF+R L HKACI +V++ ++ VLSA+L+ + SE E + LS+++IY+ Sbjct: 254 ANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYE 313 Query: 742 EVIKQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYS-IDIKSIIQKAQNEEVESMILKR 918 EV+K + G M L+RV+ SL LGC + ++ +D II++AQ +EVES++LKR Sbjct: 314 EVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISMFTTVDFSMIIEQAQTDEVESIVLKR 373 Query: 919 YGEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRP 1098 YG +AYR+FR LS+ G VET+KIS+++FV+K KIL++LWKDEYL+M+ R Sbjct: 374 YGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRH 433 Query: 1099 PAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKD-KLEPLRDKLKV 1275 +W+VD+ + E LDEMYHA LNL+LR+ HE ++ KE+L LPKD +PL K+ Sbjct: 434 SLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHH 493 Query: 1276 YRIVRTTLERSLMDLDDAIVLFHHF 1350 + VR L SL+ LDDA++LFH F Sbjct: 494 FENVRNLLRSSLVKLDDALMLFHDF 518 >ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Fragaria vesca subsp. vesca] Length = 534 Score = 348 bits (892), Expect = 5e-93 Identities = 202/466 (43%), Positives = 286/466 (61%), Gaps = 19/466 (4%) Frame = +1 Query: 10 QASKGAPKNTLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIID 189 Q SK K Y+ ++DNI+H+LR KF+ +V +ELG++C+ ++ GL++HGRL+ Q++D Sbjct: 70 QESKAGLK-VQYIAVYDNILHRLRFAKFLAVVAQELGDECKQLVAGLLEHGRLTQQQLMD 128 Query: 190 RERQKTGNI-----DVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSA 354 R QK+ + DV + F RL++AR+VERCPA P L E P K RG ++ Sbjct: 129 RADQKSKSDSTEVQDVSAAQENFVRLVNARFVERCPAPEPLLEEPPEQEGPKKPRGKSAK 188 Query: 355 KIVEQKTIEQRALAAAAPMESVRFLM----EMDDISEEKEESTKSPILGRKRKKDALDSD 522 + +TIEQR LAAA PME++RFL+ E DD ++ E + S +G KRK D LDS+ Sbjct: 189 MVQVPETIEQRVLAAARPMEAIRFLITTESETDDPLQKSENNFSSMGVGEKRKFDDLDSE 248 Query: 523 EDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVA 702 E + K +LWR NFE+F+R L HKACI V+ ++ A++VL AVL + ET+ Sbjct: 249 EHGSNDKGVILWRANFEQFIRCLRHKACIESVRARHDDGAAVVLRAVLKATRNQETKVKT 308 Query: 703 EKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLST------DMDESYSIDIK 864 + S L ++ IY+EV+ + ++ E V+ L L L T + D YS+D+K Sbjct: 309 DYSGPLKMDAIYEEVMDSEACPSLEQECVRAHLRLLCGAPLVTGEYEDENEDVLYSVDLK 368 Query: 865 SIIQKAQNEEVESMILKRYGEEAYRIFRRL---SRAGRYVETDKISEATFVEKKGTAKIL 1035 II+ QN+EVES++LKRYG++AYRIFR L S AGR+ ETDKISE V+KK T KIL Sbjct: 369 KIIELLQNDEVESIVLKRYGKDAYRIFRLLTSQSNAGRFFETDKISEMALVDKKETPKIL 428 Query: 1036 FQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQR 1215 ++LWKD+Y+HM+ A + VWKV + E LDEMYHA NL R HE+++ Sbjct: 429 YKLWKDDYVHMEKLSLTAAKQSQVMVWKVHKSIVWEHVLDEMYHAAYNLVKRYDHEREEN 488 Query: 1216 KEVLQLPKDK-LEPLRDKLKVYRIVRTTLERSLMDLDDAIVLFHHF 1350 KEV PK+K + L K + VR + SL+ LDDA++LFH F Sbjct: 489 KEVTNTPKEKRIGELEKKANRFLAVRKIMASSLLKLDDALMLFHDF 534 >ref|XP_002872419.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis lyrata subsp. lyrata] gi|297318256|gb|EFH48678.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis lyrata subsp. lyrata] Length = 521 Score = 347 bits (891), Expect = 7e-93 Identities = 191/443 (43%), Positives = 280/443 (63%), Gaps = 7/443 (1%) Frame = +1 Query: 43 YMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQKTGNIDV 222 Y+VLF+NI+H++R KF +IV EELG +C +L GL+ +GRL+ Q+I+R+R I Sbjct: 86 YIVLFNNILHRVRYNKFSRIVNEELGSECGAVLDGLLSNGRLTLGQLIERDRDSGKTIGS 145 Query: 223 QVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIV-EQKTIEQRALAA 399 + + D ++L++AR+VER P+ P L + PAKKRG +AKI+ E +T+E+R + A Sbjct: 146 EAIRDSLQKLVAARFVERIPSPEPVLGNKD--QEPAKKRGAKAAKILKEPETLEERVVEA 203 Query: 400 AAPMESVRFLMEMDDISEEKEESTKSPILGRKRKKDALDSDEDVLDRKIEVLWRVNFEEF 579 A P++++RF + ++ S I KRK+ +DS D V+WR NFEEF Sbjct: 204 ATPVDAIRFPLIFEEDFNSSLADDDSNITEGKRKQRDVDSS----DPSSRVIWRPNFEEF 259 Query: 580 LRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYDEVIKQD 759 + RL HKAC+ VK + +IVL A+L++ E + + S +SV IY+EVIK + Sbjct: 260 IHRLRHKACVEIVKERRDEGCAIVLRAMLEVGRPQEKKVKTDNSAPMSVGSIYEEVIKTE 319 Query: 760 GGVGMDLERVKTSLYQLGCQT-----LSTDMDESYSIDIKSIIQKAQNEEVESMILKRYG 924 G M ERV+ L QL + T+M++SY +D KSII AQ +E+E+++++RYG Sbjct: 320 AGRTMLQERVEACLDQLSATSSYLPAFVTEMNDSYIVDFKSIISVAQKDEIEAVVMRRYG 379 Query: 925 EEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRPPA 1104 +EA+R+FR LS+ GR+V+TDKI++A EKK T +IL ++WKD YLHMQ P Sbjct: 380 KEAFRMFRYLSQEGRFVDTDKIADAALTEKKDTPQILLKMWKDGYLHMQKLAITGTYVP- 438 Query: 1105 FYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKLE-PLRDKLKVYR 1281 F +WKV++ + LDEMYHA LNL LR+ HE + KE+L LP DKLE PL++++K R Sbjct: 439 FLLWKVNKLIVTRQMLDEMYHASLNLNLRLAHELESEKELLMLPSDKLEGPLKERVKKVR 498 Query: 1282 IVRTTLERSLMDLDDAIVLFHHF 1350 R L ++ LDDAI+LFH F Sbjct: 499 AKRLLLSSTMFKLDDAIMLFHDF 521 >ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa] gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa] Length = 520 Score = 345 bits (884), Expect = 4e-92 Identities = 200/447 (44%), Positives = 287/447 (64%), Gaps = 8/447 (1%) Frame = +1 Query: 34 NTLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQKTGN 213 ++LYMVLFDN++H++R +KFM IV +E + C ++ L+QHGRLS +QI D R ++ + Sbjct: 82 SSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETLLQHGRLSSEQIFDGFRDRSSS 141 Query: 214 IDVQVVCDWFKRLLSARYVERCPASVPSLS-PHAVVEPPAKKRGTNSAK-IVEQKTIEQR 387 ++ + + +L+ ARYVERCP S P L+ P P ++RG SAK +E +T+EQR Sbjct: 142 GGMEALQENMHKLVMARYVERCPISEPFLALPSEEEAAPVRRRGAKSAKAFLEPETLEQR 201 Query: 388 ALAAAAPMESVRFLMEMD---DISEEKEESTKSPILGRKRKKDALDSDED--VLDRKIEV 552 L AA P E +RF E++ +K E+ S +G KRK DAL+SD D V D+++ Sbjct: 202 VLVAAVPPEGMRFSFELNPEIGADRDKVENNSSSNIGDKRKLDALESDIDGGVADKQV-A 260 Query: 553 LWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVND 732 LWRVNFEEF+RRL HK CI V+T +++EA+ V +A+LD S E + S LS N Sbjct: 261 LWRVNFEEFIRRLRHKICIETVRTRLDDEAATVFTAMLDASRSEEKKIKTASSVPLSENS 320 Query: 733 IYDEVIKQDGGVGMDLERVKTSLYQLGCQ-TLSTDMDESYSIDIKSIIQKAQNEEVESMI 909 IY EVIK + G M L+ V + L L +D SYSID K I+ AQ + ES++ Sbjct: 321 IYAEVIKSEKGRNMTLDYVISVLVGLSSSPPFVRVVDNSYSIDFKHTIEVAQTD--ESIV 378 Query: 910 LKRYGEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNA 1089 K+YG++AYR+FR LS+AG +ETDKIS++ F+EKK TA IL ++W+ +YL M+ + Sbjct: 379 YKKYGKDAYRMFRLLSKAGCLLETDKISDSIFLEKKETANILSKMWQGDYLQMEKLIAG- 437 Query: 1090 NRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKLEPLRDKL 1269 P F +WKV+ + RER LD+M+HA LNL LR+ +E +Q+KE+L L D P+++K Sbjct: 438 --PTQFLLWKVNMINLRERVLDDMFHAALNLSLRVAYELEQQKEILHLGVD--GPMKEKY 493 Query: 1270 KVYRIVRTTLERSLMDLDDAIVLFHHF 1350 + + VR LE S M LDDAI++FH F Sbjct: 494 EKLKKVRFLLESSRMKLDDAIMIFHDF 520 >ref|XP_002875937.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis lyrata subsp. lyrata] gi|297321775|gb|EFH52196.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis lyrata subsp. lyrata] Length = 521 Score = 340 bits (872), Expect = 1e-90 Identities = 186/443 (41%), Positives = 278/443 (62%), Gaps = 7/443 (1%) Frame = +1 Query: 43 YMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQKTGNIDV 222 Y+VLF+NI+H++R KF ++V EELG +C +L GL+ +GRL+ Q+I+R+R I Sbjct: 86 YIVLFNNILHRVRYNKFSRLVNEELGSECGAVLDGLLSNGRLTLGQLIERDRGSGKTIGS 145 Query: 223 QVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIV-EQKTIEQRALAA 399 + + D ++L++AR+VER P+ P L + PAKKRG +AKI+ E +T+E+R + A Sbjct: 146 EAIRDSLQKLVAARFVERIPSPEPVLGNKE--QEPAKKRGAKAAKILKEPETLEERVVEA 203 Query: 400 AAPMESVRFLMEMDDISEEKEESTKSPILGRKRKKDALDSDEDVLDRKIEVLWRVNFEEF 579 A P++++RF + ++ + S I KRK+ +DS D V+W N+EEF Sbjct: 204 ATPVDAIRFPLIFEEDAHSSLADDDSNITEGKRKQRDVDSS----DPSSGVIWHPNYEEF 259 Query: 580 LRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYDEVIKQD 759 + RL HKAC+ VK + +IVL A+L++ E + + S +S+ IY+EVIK + Sbjct: 260 IHRLRHKACVEIVKERRDEGCAIVLRAMLEVGRSQEKKVKTDNSAPMSIGSIYEEVIKTE 319 Query: 760 GGVGMDLERVKTSLYQLGCQT-----LSTDMDESYSIDIKSIIQKAQNEEVESMILKRYG 924 G M ERV+ L QL + T+M++SY +D KSII AQ +E+E+++++RYG Sbjct: 320 AGRTMLQERVEACLDQLSATSSYLPAFVTEMNDSYIVDFKSIISVAQKDEIEAVVMRRYG 379 Query: 925 EEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRPPA 1104 +EA+R+FR LS+ GR+VETDKI++A EKK T + L ++WKD YLHMQ P Sbjct: 380 KEAFRMFRYLSQEGRFVETDKIADAALTEKKDTPQFLLKMWKDGYLHMQKLAITGTYVP- 438 Query: 1105 FYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKLE-PLRDKLKVYR 1281 F +WKV++ + LDEMYHA LNL LR+ HE + KE+L LP DKLE PL++++ R Sbjct: 439 FLLWKVNKLIVTRQMLDEMYHASLNLNLRLAHELESEKELLMLPSDKLEGPLKERVIKVR 498 Query: 1282 IVRTTLERSLMDLDDAIVLFHHF 1350 R L ++ LDDAI+LFH F Sbjct: 499 AKRLLLSSTMFKLDDAIMLFHDF 521 >ref|XP_006404191.1| hypothetical protein EUTSA_v10010290mg [Eutrema salsugineum] gi|557105310|gb|ESQ45644.1| hypothetical protein EUTSA_v10010290mg [Eutrema salsugineum] Length = 522 Score = 337 bits (863), Expect = 1e-89 Identities = 189/446 (42%), Positives = 279/446 (62%), Gaps = 8/446 (1%) Frame = +1 Query: 37 TLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQKTGNI 216 T Y+VLF+N+IH++R KF ++V EELG C +L GL+ +GRL+ Q+I+R+R I Sbjct: 84 TQYIVLFNNVIHRVRYNKFSRVVNEELGSQCGAVLDGLLSNGRLTLGQLIERDRDSENTI 143 Query: 217 DVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIV-EQKTIEQRAL 393 + + D ++L++AR+VER P+ P L P AKKRG +AKI+ E +++E+R L Sbjct: 144 GSEAIRDSLEKLVAARFVERIPSPEPVLGKKE-EGPAAKKRGAKAAKILKEPESLEERIL 202 Query: 394 AAAAPMESVRF-LMEMDDISEEKEESTKSPILGRKRKKDALDSDEDVLDRKIEVLWRVNF 570 AA P+E++RF + +D+S ++ + G+++++D SD EV+WR NF Sbjct: 203 EAATPVEAIRFPHIFKEDLSSSLADNDSNISEGKRKQRDVESSDP-----SDEVIWRPNF 257 Query: 571 EEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYDEVI 750 EEF+RRL HKAC+ VK + +IVL A+L++ E + +KS +S+ IY+EVI Sbjct: 258 EEFIRRLRHKACVEIVKERRDEGCAIVLKAMLEVGRSQEKKVKTDKSVPMSMGSIYEEVI 317 Query: 751 KQDGGVGMDLERVKTSLYQLGCQT-----LSTDMDESYSIDIKSIIQKAQNEEVESMILK 915 K + G M ERV+ L QL + + D+SY +D KSII AQ +E+E++I+ Sbjct: 318 KTEAGRTMLQERVEACLEQLSASSSYLPAFVIETDDSYIVDFKSIISVAQKDELEAVIMG 377 Query: 916 RYGEEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANR 1095 RYG+EA+R+FR LS+ R+VETDKI++A EKK T +IL ++WKD YLHMQ Sbjct: 378 RYGKEAFRMFRYLSQEDRFVETDKIADAALTEKKNTPQILLKMWKDSYLHMQKLAVTGVY 437 Query: 1096 PPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKLE-PLRDKLK 1272 P F +WKV++ + LDEMYHA LNL LR+THE D KE+L LP KLE L++++ Sbjct: 438 VP-FLLWKVNKLIVSRQMLDEMYHASLNLSLRLTHEVDSEKELLLLPMAKLEGALKERVN 496 Query: 1273 VYRIVRTTLERSLMDLDDAIVLFHHF 1350 + R L + LDD+I+LFH F Sbjct: 497 KIKAKRMLLSSTRFKLDDSIMLFHDF 522 >ref|NP_566914.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis thaliana] gi|20466336|gb|AAM20485.1| RNA polymerase III subunit-like protein [Arabidopsis thaliana] gi|34098883|gb|AAQ56824.1| At3g49000 [Arabidopsis thaliana] gi|332644960|gb|AEE78481.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis thaliana] Length = 523 Score = 335 bits (859), Expect = 4e-89 Identities = 187/444 (42%), Positives = 275/444 (61%), Gaps = 8/444 (1%) Frame = +1 Query: 43 YMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQKTGNIDV 222 Y+VLF+NI+H++R KF +IV EEL C +L GL+ +GRL+ Q I+R+R I Sbjct: 86 YIVLFNNILHRVRYNKFSRIVNEELDSKCGAVLDGLLSNGRLTLGQFIERDRDSGNTIGS 145 Query: 223 QVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIV-EQKTIEQRALAA 399 + + D ++L++AR+VER P+ P L + PAK+RG +AKI+ E +T+E++ + A Sbjct: 146 EAIRDSLQKLVAARFVERIPSPEPVLGNKE--KEPAKRRGAKAAKILKEPETLEEQVVEA 203 Query: 400 AAPMESVRFLMEMDDISEEKEESTKSPILGRKRKKDALDSDEDVLDRKIEVLWRVNFEEF 579 A P++++RF + ++ S S I KRK+ D D D V+WR NFEEF Sbjct: 204 ATPVDAIRFPLIFEEDSNSSLADDNSNITEGKRKQ----RDVDTSDSSSGVIWRPNFEEF 259 Query: 580 LRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYDEVIKQD 759 + RL HKAC+ VK + +IVL A+L++ E + + S +SV IY+EVIK + Sbjct: 260 IHRLRHKACVEIVKERRDEGCAIVLRAMLEVGRSQEKKVKTDNSAPMSVGSIYEEVIKTE 319 Query: 760 GGVGMDLERVKTSLYQLGCQT-----LSTDMDESYSIDIKSIIQKAQNEEVESMILKRYG 924 G M ERV+ L QL + ++++SY +D KSII AQ +E+E+++++RYG Sbjct: 320 AGRTMLQERVEACLDQLSATSSYLPAFVNEVNDSYIVDYKSIISVAQKDEIEAVVMRRYG 379 Query: 925 EEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNA-NRPP 1101 +EA+R+FR LS+ GR+VETDKI++A EKK T + L ++WKD YLHMQ A Sbjct: 380 KEAFRMFRYLSQEGRFVETDKIADAALTEKKDTPQFLLKMWKDGYLHMQKLAVTAPGMYT 439 Query: 1102 AFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKLE-PLRDKLKVY 1278 F +WKV++ + LDEMYHA LNL LR+ HE + KE+L LP DKLE PL+++LK Sbjct: 440 PFLLWKVNKLIVTTQMLDEMYHASLNLSLRLAHELEAEKELLLLPLDKLEGPLKERLKKV 499 Query: 1279 RIVRTTLERSLMDLDDAIVLFHHF 1350 + R L ++ LDDAI+LFH F Sbjct: 500 KAKRLLLSSTMFKLDDAIMLFHDF 523 >ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris] gi|561016615|gb|ESW15419.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris] Length = 517 Score = 335 bits (858), Expect = 5e-89 Identities = 195/443 (44%), Positives = 278/443 (62%), Gaps = 5/443 (1%) Frame = +1 Query: 37 TLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQ-KTGN 213 T Y+VLFDNIIH+LR KF++ V +L E+C +L GL++ GRL+ Q++DR Q K Sbjct: 85 TQYLVLFDNIIHRLRFPKFLETVSRKLDEECVELLDGLLRDGRLTLKQMVDRASQGKENA 144 Query: 214 IDVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVEQ-KTIEQRA 390 +D +VV + +LL+AR VERCPA P +S + E +KRG SAKI E +T+EQR Sbjct: 145 VDTKVVREILSKLLTARLVERCPAPEPVVST-SFKETTTRKRGAKSAKIFEAPETLEQRV 203 Query: 391 LAAAAPMESVRFLMEMDDISEEKEESTKSPILGRKRKKDALDSDEDVLDRKIEVLWRVNF 570 L AA P ++RF D S E+ D + S E ++ E+LWR NF Sbjct: 204 LEAAVPGNAIRFSFTADMRSNVDGETNSDD--------DQITSVEQNDAKEEEILWRANF 255 Query: 571 EEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYDEVI 750 EEF+R + HKA I ++T ++ + VLSAVL+ + E + E S LS++ I EV+ Sbjct: 256 EEFIRHIRHKALIENIRTQHDDGTATVLSAVLEATKTVEKKVKMENSVPLSLDTITAEVM 315 Query: 751 KQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVESMILKRYGEE 930 K D G M ++R++ SL QLGC +D++YSID+K II++AQNEEVES++LKRYG + Sbjct: 316 KTDTGRTMTIDRIRASLSQLGCSQRMI-VDDAYSIDLKKIIERAQNEEVESIVLKRYGRD 374 Query: 931 AYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRPPAFY 1110 AYR+FR LS+ + +TD+I+ +T VEKK K+L++LWKD YL+M+ + + Sbjct: 375 AYRMFRLLSKDCCFHDTDQIAASTLVEKKEAPKLLYRLWKDNYLYMEKVIATGVKQTTIL 434 Query: 1111 VWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKLE---PLRDKLKVYR 1281 +WKV++ E LDEMYHA LNL LR+ EQ++ +E+L +PKDKL+ PL+ K K Sbjct: 435 MWKVNKPLVWEHVLDEMYHAALNLSLRMAFEQEKDEELLNVPKDKLKEPGPLQKKYKRLL 494 Query: 1282 IVRTTLERSLMDLDDAIVLFHHF 1350 V L SLM LD+A++LFH F Sbjct: 495 NVWLLLGSSLMKLDEALMLFHDF 517 >ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine max] Length = 518 Score = 334 bits (856), Expect = 8e-89 Identities = 195/444 (43%), Positives = 282/444 (63%), Gaps = 6/444 (1%) Frame = +1 Query: 37 TLYMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQ-KTGN 213 T Y+VLFDNIIH+LR KF+ IV +L E+C +L GL++ GRL+ Q++DRE Q K Sbjct: 85 TQYLVLFDNIIHRLRFPKFLDIVSRKLDEECVKLLVGLLRDGRLTLKQMVDRESQGKENA 144 Query: 214 IDVQVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIVEQ-KTIEQRA 390 + +VV + +LL+AR+VERCPA P +S + E KKRG SAKI E +T+EQR Sbjct: 145 VPTKVVRETLCKLLTARFVERCPAPEPVVST-SFKETTTKKRGAKSAKIFEAPETLEQRV 203 Query: 391 LAAAAPMESVRFLMEMDDISEEKEESTKSPILGRKRKKDALDSDEDVLDRKIEVLWRVNF 570 + AA P + +RF + + S E+ + + +EDV + ++LWR NF Sbjct: 204 VDAAVPGDVIRFSLTANMGSNVDRETNSDDV-------PMISVEEDVAKEE-QILWRANF 255 Query: 571 EEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYDEVI 750 EEF+R L HK I V+T ++ + VLSAVL+ +G E + + S LS++ I EV+ Sbjct: 256 EEFIRHLRHKVLIENVRTQHDDGTATVLSAVLEATGSVEKKVKMDNSVPLSLDTIITEVM 315 Query: 751 KQDGGVGMDLERVKTSLYQLGCQTLSTDMDESYSIDIKSIIQKAQNEEVESMILKRYGEE 930 K D G M ++R++ SL QLGC S ++ESY ID+K II+ A+NEEVES++LKRYG + Sbjct: 316 KTDTGRTMTIDRIRASLVQLGCSP-SMILEESYCIDLKKIIEPARNEEVESIVLKRYGRD 374 Query: 931 AYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNAN-RPPAF 1107 AYR+FR L++ + +TD+I+ +T VEKK +K+L++LWKD YL+M+ A + Sbjct: 375 AYRMFRLLAKDCCFHDTDQIAASTLVEKKEASKLLYKLWKDNYLYMEKVGATAGAKQITI 434 Query: 1108 YVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKLE---PLRDKLKVY 1278 +WKV++ E LDEMYHA LNL LR+ EQ++ +E+L++PKDKL PL+ K K Sbjct: 435 LMWKVNKPLLWEYVLDEMYHAALNLSLRMAFEQEKDEELLKVPKDKLREPGPLQKKYKRL 494 Query: 1279 RIVRTTLERSLMDLDDAIVLFHHF 1350 VR + SL+ LDDA++LFH F Sbjct: 495 LNVRLLMGSSLLKLDDALMLFHDF 518 >gb|AAM62793.1| RNA polymerase III subunit-like protein [Arabidopsis thaliana] Length = 521 Score = 334 bits (856), Expect = 8e-89 Identities = 186/444 (41%), Positives = 275/444 (61%), Gaps = 8/444 (1%) Frame = +1 Query: 43 YMVLFDNIIHKLRATKFMQIVLEELGEDCRGILYGLIQHGRLSFDQIIDRERQKTGNIDV 222 Y+VLF+NI+H++R KF +IV E+L C +L GL+ +GRL+ Q I+R+R I Sbjct: 84 YIVLFNNILHRVRYNKFSRIVNEQLDSKCGAVLDGLLSNGRLTLGQFIERDRDSGNTIGS 143 Query: 223 QVVCDWFKRLLSARYVERCPASVPSLSPHAVVEPPAKKRGTNSAKIV-EQKTIEQRALAA 399 + + D ++L++AR+VER P+ P L + PAK+RG +AKI+ E +T+E++ + A Sbjct: 144 EAIRDSLQKLVAARFVERIPSPEPVLGNKE--KEPAKRRGAKAAKILKEPETLEEQVVEA 201 Query: 400 AAPMESVRFLMEMDDISEEKEESTKSPILGRKRKKDALDSDEDVLDRKIEVLWRVNFEEF 579 A P++++RF + ++ S S I KRK+ D D D V+WR NFEEF Sbjct: 202 ATPVDAIRFPLIFEEDSNSSLADDNSNITEGKRKQ----RDVDTSDSSSGVIWRPNFEEF 257 Query: 580 LRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRPVAEKSPYLSVNDIYDEVIKQD 759 + RL HKAC+ VK + +IVL A+L++ E + + S +SV IY+EVIK + Sbjct: 258 IHRLRHKACVEIVKERRDEGCAIVLRAMLEVGRSQEKKVKTDNSAPMSVGSIYEEVIKTE 317 Query: 760 GGVGMDLERVKTSLYQLGCQT-----LSTDMDESYSIDIKSIIQKAQNEEVESMILKRYG 924 G M ERV+ L QL + ++++SY +D KSII AQ +E+E+++++RYG Sbjct: 318 AGRTMLQERVEACLDQLSATSSYLPAFVNEVNDSYIVDYKSIISVAQKDEIEAVVMRRYG 377 Query: 925 EEAYRIFRRLSRAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNA-NRPP 1101 +EA+R+FR LS+ GR+VETDKI++A EKK T + L ++WKD YLHMQ A Sbjct: 378 KEAFRMFRYLSQEGRFVETDKIADAALTEKKDTPQFLLKMWKDGYLHMQKLAVTAPGMYT 437 Query: 1102 AFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKLE-PLRDKLKVY 1278 F +WKV++ + LDEMYHA LNL LR+ HE + KE+L LP DKLE PL+++LK Sbjct: 438 PFLLWKVNKLIVTTQMLDEMYHASLNLSLRLAHELEAEKELLLLPLDKLEGPLKERLKKV 497 Query: 1279 RIVRTTLERSLMDLDDAIVLFHHF 1350 + R L ++ LDDAI+LFH F Sbjct: 498 KAKRLLLSSTMFKLDDAIMLFHDF 521