BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00008647
         (794 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   447   e-123
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   378   e-102
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       365   1e-98
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       360   4e-97
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   357   3e-96
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   355   1e-95
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]   354   2e-95
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   353   4e-95
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu...   352   1e-94
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   351   2e-94
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   348   1e-93
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   348   1e-93
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de...   348   2e-93
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   347   2e-93
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   347   3e-93
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      347   3e-93
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   347   3e-93
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   347   3e-93
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   347   3e-93
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   347   3e-93

>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  447 bits (1149), Expect = e-123
 Identities = 225/264 (85%), Positives = 244/264 (92%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SSTETLSVAQ EV+KI DVEVV NGTTYIFSDGIGKISVDFA +VA KCGL
Sbjct: 425  AARLGQSFGSSTETLSVAQNEVEKIPDVEVVTNGTTYIFSDGIGKISVDFARRVAIKCGL 484

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            K  IPSAFQIRYGGYKGVVAIDPTSSVKMSLR SM KY S+DTKLNVLGWSKYQPCFLNR
Sbjct: 485  KSNIPSAFQIRYGGYKGVVAIDPTSSVKMSLRPSMLKYQSDDTKLNVLGWSKYQPCFLNR 544

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            QIITLLSTLGV D VFEKKQ EAVAQL D+LV  +KA+EALD+MSLGENT+ILKEML CG
Sbjct: 545  QIITLLSTLGVMDHVFEKKQREAVAQLNDILVDPLKALEALDLMSLGENTYILKEMLKCG 604

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y+P+EEPFL+MMLQTF SSQLLD+RTKSRIFIP+ARNMMGCLDETGTL+YGQVFVQFSGA
Sbjct: 605  YKPDEEPFLAMMLQTFRSSQLLDLRTKSRIFIPQARNMMGCLDETGTLEYGQVFVQFSGA 664

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            GQRRF+EESIKFDEYTS+D +++V
Sbjct: 665  GQRRFYEESIKFDEYTSTDHNYIV 688


>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  378 bits (970), Expect = e-102
 Identities = 188/247 (76%), Positives = 217/247 (87%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSFSSSTETL VAQ EV++I DVEVVR+GTTYIFSDGIGKIS DFA +VA KCG+
Sbjct: 492  AARLGQSFSSSTETLKVAQYEVERIPDVEVVRDGTTYIFSDGIGKISSDFARRVATKCGI 551

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            +  +PSAFQIRYGGYKGVVA+DPTSS+K+SLR+SM KY S++TKL+VL WSKYQPCF+NR
Sbjct: 552  RDGVPSAFQIRYGGYKGVVAVDPTSSMKLSLRKSMLKYQSDNTKLDVLSWSKYQPCFMNR 611

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            QIITLLSTLGV D VFEKKQ EAVAQL D+LV  +KA +ALD+MS GENT ILKEML CG
Sbjct: 612  QIITLLSTLGVRDHVFEKKQREAVAQLDDILVDPLKAQDALDLMSPGENTNILKEMLKCG 671

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y+P+EEPFLSMMLQTF  ++LLD+R K+RIFIP+AR MMGC+DETGTL+YGQVFVQFSG 
Sbjct: 672  YKPDEEPFLSMMLQTFRLAKLLDLRVKARIFIPQARQMMGCMDETGTLEYGQVFVQFSGT 731

Query: 72   GQRRFFE 52
            G    +E
Sbjct: 732  GSSGLYE 738


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  365 bits (937), Expect = 1e-98
 Identities = 182/264 (68%), Positives = 227/264 (85%)
 Frame = -3

Query: 792 AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
           AARLGQSF SS ETLSV + E+K I DVEV  +GT Y+FSDGIGKIS DFAH+VA+KCGL
Sbjct: 181 AARLGQSFGSSRETLSVGRHEIKYIPDVEV--HGTNYVFSDGIGKISADFAHRVAKKCGL 238

Query: 612 KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
           + + PSAFQIRYGGYKGVVA+DP S +K+SLR+SM KY+S +TKL+VLGWSKYQPC+LNR
Sbjct: 239 Q-HTPSAFQIRYGGYKGVVAVDPYSPMKLSLRKSMLKYESNNTKLDVLGWSKYQPCYLNR 297

Query: 432 QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
           Q++TL+STLGV D VF++KQ+EAVAQL  +L   +KA EALD+MS GENT ILKEMLNCG
Sbjct: 298 QLVTLMSTLGVKDEVFKRKQNEAVAQLDAILHDSLKAQEALDLMSPGENTNILKEMLNCG 357

Query: 252 YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
           Y P+ EPFLSMMLQTF +S+LLD+RT++RIFIP+ R+MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 358 YLPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPKGRSMMGCLDESRTLEYGQVFVQFTGA 417

Query: 72  GQRRFFEESIKFDEYTSSDSDFVV 1
           G R+F+EES  F++  S++ +F++
Sbjct: 418 GGRQFYEESHHFNDSGSANYNFIL 441


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  360 bits (923), Expect = 4e-97
 Identities = 182/264 (68%), Positives = 220/264 (83%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + EV+ I DV    +GT YIFSDGIGKIS DFAH+V  KCGL
Sbjct: 488  AARLGQSFGSSRETLSVGRHEVEVIPDVACSLHGTNYIFSDGIGKISADFAHRVTIKCGL 547

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PS+FQIRYGGYKGVVA+DP SS+K+SLR+SM KY+S + KL+VLGWSKYQPC+LNR
Sbjct: 548  Q-YTPSSFQIRYGGYKGVVAVDPYSSMKLSLRKSMLKYESNNIKLDVLGWSKYQPCYLNR 606

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q++TLLSTLGV D V E+KQ+EAV QL  +L   +KA EAL++MS GENT ILKEMLNCG
Sbjct: 607  QLVTLLSTLGVIDDVLEQKQNEAVDQLDAILHDSLKAQEALELMSPGENTNILKEMLNCG 666

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RT++RIFIP  R MMGCLDE+ TL+YGQVFVQFSGA
Sbjct: 667  YMPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPNGRTMMGCLDESRTLEYGQVFVQFSGA 726

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G+R+FFEES  F++  S++ DF++
Sbjct: 727  GRRQFFEESHPFNDSGSANCDFIL 750


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  357 bits (916), Expect = 3e-96
 Identities = 181/264 (68%), Positives = 218/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + EV+ I DV    +GT YIFSDGIGKIS DFA +VA KCGL
Sbjct: 489  AARLGQSFGSSRETLSVGRHEVEVIPDVVCSLHGTNYIFSDGIGKISADFARRVAVKCGL 548

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PS FQIRYGGYKGVVA+DP SS+K+SLR SM KY+S + KL+VLGWSKYQPC+LNR
Sbjct: 549  Q-YTPSCFQIRYGGYKGVVAVDPYSSMKLSLRNSMLKYESNNIKLDVLGWSKYQPCYLNR 607

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q++TLLSTLGV D VFE+KQ+EAV QL  +L   +KA EAL++MS GENT ILKEMLNCG
Sbjct: 608  QLVTLLSTLGVKDDVFEQKQNEAVDQLDAILHDTLKAQEALELMSPGENTNILKEMLNCG 667

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RT+SRIFIP  R MMGCLDE+ TL+YGQVFVQF+G 
Sbjct: 668  YMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFVQFTGT 727

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G+R+F+EES  F++  S++ DF++
Sbjct: 728  GRRQFYEESHPFNDSGSTNCDFIL 751


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  355 bits (911), Expect = 1e-95
 Identities = 180/259 (69%), Positives = 216/259 (83%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SSTETLSV++ E+++I DV   +NGT Y FSDGIGKIS DFA +VA KCG+
Sbjct: 489  AARLGQSFGSSTETLSVSKREIEEIQDV---KNGTEYTFSDGIGKISEDFARQVAAKCGV 545

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            +   PSAFQIRYGGYKGVVA+DP+S  K+SLR SM KY S++TKL+VL WSKYQPCFLNR
Sbjct: 546  RSSTPSAFQIRYGGYKGVVAVDPSSKKKLSLRPSMLKYQSDNTKLDVLAWSKYQPCFLNR 605

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            QIITLLSTLGV D VFEK+Q EAVAQL DVL+  ++A EALD+MS GENT ILKEML CG
Sbjct: 606  QIITLLSTLGVKDHVFEKRQREAVAQLDDVLIDPMRAQEALDLMSPGENTHILKEMLKCG 665

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            YEP+ EPFLSMMLQTF +S+LLD+R K+R+FIP+AR MMGCLDETG L YGQVFV++SGA
Sbjct: 666  YEPDGEPFLSMMLQTFRASKLLDLRVKARVFIPKARQMMGCLDETGILKYGQVFVRYSGA 725

Query: 72   GQRRFFEESIKFDEYTSSD 16
             +R  F++S  +D  T+++
Sbjct: 726  VKRGLFDDS--YDNSTANE 742


>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
          Length = 697

 Score =  354 bits (909), Expect = 2e-95
 Identities = 176/264 (66%), Positives = 217/264 (82%)
 Frame = -3

Query: 792 AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
           AARLGQSFSSS ETL VA+ E++ I D+E+ R+GTTY+FSDGIGKIS + AH+VA KCG 
Sbjct: 30  AARLGQSFSSSKETLKVAKHEIEIIPDIEIHRDGTTYVFSDGIGKISAELAHRVAIKCGC 89

Query: 612 KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
           K   PSAFQIRYGGYKGVVA+DPTSS K+SLR+SM+KY+SE+T L+VL WSKY+PCFLNR
Sbjct: 90  KSSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNR 149

Query: 432 QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
           Q+ITLLSTLGV D VFEKKQ EAV QL  +L   ++A EAL++MS GENT ILKEML CG
Sbjct: 150 QLITLLSTLGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCG 209

Query: 252 YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
           Y+P+ EPFLSMMLQTF +++LL++RTK+RIF+P  R+MMGCLDET TL+YG+VFVQ SG 
Sbjct: 210 YKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGT 269

Query: 72  GQRRFFEESIKFDEYTSSDSDFVV 1
           G R+ F +S+ F    S   +F++
Sbjct: 270 GGRQSFGDSLMFYGSGSHHDNFIL 293


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  353 bits (906), Expect = 4e-95
 Identities = 176/264 (66%), Positives = 216/264 (81%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSFSSS ETL VA+ E++ I D+E  R+GTTY+FSDGIGKIS + AH+VA KCG 
Sbjct: 486  AARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGC 545

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            K   PSAFQIRYGGYKGVVA+DPTSS K+SLR+SM+KY+SE+T L+VL WSKY+PCFLNR
Sbjct: 546  KNSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNR 605

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q+ITLLSTLGV D VFEKKQ EAV QL  +L   ++A EAL++MS GENT ILKEML CG
Sbjct: 606  QLITLLSTLGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCG 665

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y+P+ EPFLSMMLQTF +++LL++RTK+RIF+P  R+MMGCLDET TL+YG+VFVQ SG 
Sbjct: 666  YKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGT 725

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R+ F +S+ F    S   +F++
Sbjct: 726  GGRQSFGDSLMFYGSGSHHDNFIL 749


>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
          Length = 1050

 Score =  352 bits (902), Expect = 1e-94
 Identities = 180/264 (68%), Positives = 218/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SSTETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFA +VA KCGL
Sbjct: 336  AARLGQSFGSSTETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGL 393

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PSAFQIRYGGYKGVVA+DP SS+K+SLR+SM KY+S++ KL+VLGWSKYQPCFLNR
Sbjct: 394  Q-YTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCFLNR 452

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q+ITLLSTLGV D + E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 453  QLITLLSTLGVKDDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCG 512

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RTKSRIFIP  R MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 513  YMPDAEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGA 572

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R F E+   F+   S++ +F++
Sbjct: 573  GHREFSEDLHPFNNSRSTNCNFIL 596


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  351 bits (900), Expect = 2e-94
 Identities = 177/254 (69%), Positives = 211/254 (83%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SSTETLSV+  E++ I D+EV R GT Y+FSDGIGKIS +FA KVA KCG 
Sbjct: 499  AARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGC 558

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            KG+ PSAFQIRY GYKGVVA+DPTSS K+SLRRSM+KY+SE+TKL+VL  SKYQPCFLNR
Sbjct: 559  KGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNR 618

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q+ITLLSTLGVPD  FE+KQ EAV QL  +L   ++A EAL++MS GENT ILKEML CG
Sbjct: 619  QLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCG 678

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y+P+ EPFLSMMLQTF +S+LL++RTK+RIFIP  R+MMGCLDET TL++GQVFV+FSG+
Sbjct: 679  YQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFSGS 738

Query: 72   GQRRFFEESIKFDE 31
              R  ++ S  F E
Sbjct: 739  RFRNLYDSSDMFSE 752


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  348 bits (894), Expect = 1e-93
 Identities = 177/264 (67%), Positives = 218/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFAH+VA KCGL
Sbjct: 488  AARLGQSFGSSRETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISGDFAHRVASKCGL 545

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PSAFQIRYGGYKGVV +DP SS+K+SLR+SM KY+S++ KL+VLGWSKYQPC+LNR
Sbjct: 546  Q-YTPSAFQIRYGGYKGVVGVDPDSSMKLSLRKSMSKYESDNIKLDVLGWSKYQPCYLNR 604

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q+ITLLSTLGV D V E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 605  QLITLLSTLGVKDEVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCG 664

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y+P+ EPFLSMMLQTF +S+LLD+RT+SRIFIP  R MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 665  YKPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFVQFTGA 724

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G   F ++   F+   S++S+F++
Sbjct: 725  GHGEFSDDLHPFNNSRSTNSNFIL 748


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  348 bits (893), Expect = 1e-93
 Identities = 178/264 (67%), Positives = 217/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFA +VA KCGL
Sbjct: 487  AARLGQSFGSSKETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGL 544

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PSAFQIRYGGYKGVVA+DP SS+K+SLR+SM KY+S++ KL+VLGWSKYQPC+LNR
Sbjct: 545  Q-YTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNR 603

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q+ITLLSTLGV D + E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 604  QLITLLSTLGVKDDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCG 663

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RTKSRIFIP  R MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 664  YMPDAEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGA 723

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R F E+   F+   S++ +F++
Sbjct: 724  GHREFSEDLHPFNNSRSTNCNFIL 747


>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1021

 Score =  348 bits (892), Expect = 2e-93
 Identities = 178/264 (67%), Positives = 217/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFA +VA KCGL
Sbjct: 336  AARLGQSFGSSKETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGL 393

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PSAFQIRYGGYKGVVA+DP SS+K++LR+SM KY+S++ KL+VLGWSKYQPCFLNR
Sbjct: 394  Q-YTPSAFQIRYGGYKGVVAVDPYSSMKLTLRKSMSKYESDNNKLDVLGWSKYQPCFLNR 452

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q+ITLLSTLGV D + E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 453  QLITLLSTLGVRDDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCG 512

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RTKSRIFIP  R MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 513  YMPDAEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGA 572

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R F E+   F+   S++ +F++
Sbjct: 573  GHREFSEDLHPFNNSRSTNCNFIL 596


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  347 bits (891), Expect = 2e-93
 Identities = 177/264 (67%), Positives = 217/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFA +VA KCGL
Sbjct: 480  AARLGQSFGSSKETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGL 537

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PSAFQIRYGGYKGVVA+DP SS+K+SLR+SM KY+S++ KL+VLGWSKYQPC+LNR
Sbjct: 538  Q-YTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNR 596

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q++TLLSTLGV D V E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 597  QLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTTILKAMLNCG 656

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RT+SRIFIP  R MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 657  YMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGA 716

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R F E+   F+   S++ +F++
Sbjct: 717  GHREFSEDLHPFNNSRSTNCNFIL 740


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score =  347 bits (890), Expect = 3e-93
 Identities = 177/264 (67%), Positives = 218/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SSTETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFA +VA KCGL
Sbjct: 488  AARLGQSFGSSTETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGL 545

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + + PSAFQIRYGGYKGVVA+DP SS+K+SLR+SM KY+S++ KL+VLGWSKYQPC+LNR
Sbjct: 546  Q-HTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNR 604

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q++TLLSTLGV D V E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 605  QLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCG 664

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RTKSRIFIP  R MMGCLDE+ TL+YGQVFVQF+G+
Sbjct: 665  YMPDAEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRLMMGCLDESRTLEYGQVFVQFTGS 724

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R F E+   F+   S++ +F++
Sbjct: 725  GHREFSEDLHPFNNSRSTNCNFIL 748


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  347 bits (890), Expect = 3e-93
 Identities = 174/246 (70%), Positives = 211/246 (85%), Gaps = 1/246 (0%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSFSSSTETLSV+++E+  I D+E++++G  Y+FSDGIGKIS +FA KVA KC L
Sbjct: 492  AARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCRL 551

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            KG  PSAFQIR GG+KGVVAIDPTSS K+SLR+SM KY+SE+TKL+VL WSKYQPCFLNR
Sbjct: 552  KGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNR 611

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q+ITLLSTLGVPDR FEKKQ E V QL  +L   ++A EAL++MS GENT ILKEML CG
Sbjct: 612  QLITLLSTLGVPDRAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCG 671

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y+P+ EPFLSMML+TF +S+LL++RTK+RIF+ + R+MMGCLDET TL+YGQVFVQFSG+
Sbjct: 672  YKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQFSGS 731

Query: 72   -GQRRF 58
              +RRF
Sbjct: 732  RSERRF 737


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  347 bits (890), Expect = 3e-93
 Identities = 177/264 (67%), Positives = 217/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFA +VA KCGL
Sbjct: 488  AARLGQSFGSSKETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGL 545

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PSAFQIRYGGYKGVVA+DP SS+K+SLR+SM KY+S++ KL+VLGWSKYQPC+LNR
Sbjct: 546  Q-YTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNR 604

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q++TLLSTLGV D V E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 605  QLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCG 664

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RT+SRIFIP  R MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 665  YMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGA 724

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R F E+   F+   S++ +F++
Sbjct: 725  GHREFSEDLHPFNNSRSTNCNFIL 748


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  347 bits (890), Expect = 3e-93
 Identities = 177/264 (67%), Positives = 217/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFA +VA KCGL
Sbjct: 488  AARLGQSFGSSRETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGL 545

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PSAFQIRYGGYKGVVA+DP SS+K+SLR+SM KY+S++ KL+VLGWSKYQPC+LNR
Sbjct: 546  Q-YTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNR 604

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q++TLLSTLGV D V E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 605  QLVTLLSTLGVKDDVLEQKQKEAVHQLDAILHDSLKAQEALELMSPGENTNILKAMLNCG 664

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RT+SRIFIP  R MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 665  YMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGA 724

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R F E+   F+   S++ +F++
Sbjct: 725  GHREFSEDLHPFNNSRSTNCNFIL 748


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  347 bits (890), Expect = 3e-93
 Identities = 177/264 (67%), Positives = 217/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFA +VA KCGL
Sbjct: 454  AARLGQSFGSSKETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGL 511

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PSAFQIRYGGYKGVVA+DP SS+K+SLR+SM KY+S++ KL+VLGWSKYQPC+LNR
Sbjct: 512  Q-YTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNR 570

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q++TLLSTLGV D V E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 571  QLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCG 630

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RT+SRIFIP  R MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 631  YMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGA 690

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R F E+   F+   S++ +F++
Sbjct: 691  GHREFSEDLHPFNNSRSTNCNFIL 714


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  347 bits (890), Expect = 3e-93
 Identities = 177/264 (67%), Positives = 217/264 (82%)
 Frame = -3

Query: 792  AARLGQSFSSSTETLSVAQEEVKKISDVEVVRNGTTYIFSDGIGKISVDFAHKVARKCGL 613
            AARLGQSF SS ETLSV + E++ I DV+V  +GT+Y+FSDGIGKIS DFA +VA KCGL
Sbjct: 336  AARLGQSFGSSRETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGL 393

Query: 612  KGYIPSAFQIRYGGYKGVVAIDPTSSVKMSLRRSMWKYDSEDTKLNVLGWSKYQPCFLNR 433
            + Y PSAFQIRYGGYKGVVA+DP SS+K+SLR+SM KY+S++ KL+VLGWSKYQPC+LNR
Sbjct: 394  Q-YTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNR 452

Query: 432  QIITLLSTLGVPDRVFEKKQSEAVAQLRDVLVSRVKAMEALDIMSLGENTFILKEMLNCG 253
            Q++TLLSTLGV D V E+KQ EAV QL  +L   +KA EAL++MS GENT ILK MLNCG
Sbjct: 453  QLVTLLSTLGVKDDVLEQKQKEAVHQLDAILHDSLKAQEALELMSPGENTNILKAMLNCG 512

Query: 252  YEPNEEPFLSMMLQTFVSSQLLDVRTKSRIFIPRARNMMGCLDETGTLDYGQVFVQFSGA 73
            Y P+ EPFLSMMLQTF +S+LLD+RT+SRIFIP  R MMGCLDE+ TL+YGQVFVQF+GA
Sbjct: 513  YMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGA 572

Query: 72   GQRRFFEESIKFDEYTSSDSDFVV 1
            G R F E+   F+   S++ +F++
Sbjct: 573  GHREFSEDLHPFNNSRSTNCNFIL 596