BLASTX nr result
ID: Mentha29_contig00008255
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00008255
(1643 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 655 0.0
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 652 0.0
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 625 e-176
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus... 598 e-168
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 570 e-160
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 543 e-151
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc... 540 e-151
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr... 538 e-150
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr... 538 e-150
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun... 521 e-145
ref|XP_007015592.1| BSD domain (BTF2-like transcription factors,... 509 e-141
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc... 508 e-141
ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 501 e-139
ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transc... 499 e-138
ref|XP_007144178.1| hypothetical protein PHAVU_007G134900g [Phas... 498 e-138
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps... 494 e-137
ref|NP_175971.3| probable RNA polymerase II transcription factor... 494 e-137
ref|XP_002310512.2| transcription factor-related family protein ... 493 e-137
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab... 493 e-136
ref|XP_003591640.1| General transcription factor IIH subunit [Me... 491 e-136
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Solanum tuberosum]
Length = 599
Score = 655 bits (1690), Expect = 0.0
Identities = 322/469 (68%), Positives = 389/469 (82%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWSVKP 180
RIKLLQE+SELQ +H++LV GG L+EAEFW+ +K+LL+ +++++PKQR+ALKN+MWSVKP
Sbjct: 129 RIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSENKKPKQRVALKNDMWSVKP 188
Query: 181 LSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTRN 360
LSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KM+EKEFWTKYSRA+YLHST+N
Sbjct: 189 LSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHSTKN 248
Query: 361 VVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLHG 540
+V VFLK+DDML +EARRKIRRVDPT+D+EADEGDDY+HLPDHGL G
Sbjct: 249 IVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLPQG 308
Query: 541 EAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDEK 720
E K++L+ QYEP++RSF Q LNQHAAVVL+GRV+DVELGDTRSVAEA R Q E + E
Sbjct: 309 ETKEILEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTYQAEQATEV 368
Query: 721 LNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSAT 900
+ N ++ ++SR AEIEDLQGP+DP VALLSIKDPRDYFDSQQANA+KALGD +
Sbjct: 369 SDENAYRERVKKVSRVAEIEDLQGPQDPPVALLSIKDPRDYFDSQQANAIKALGDAETGI 428
Query: 901 EPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNSP 1080
L+ VS +A+ SL++ I +I GL EPI++ ++ALKV NGL+Q+ISSTK +LG +P
Sbjct: 429 RQLKFSVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTKYYLGKNP 488
Query: 1081 NESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKLQ 1260
+ESVLD LP TK ELL HW ++QELLK FWSSYP+TTKY Y KV R+KD MS+IYPKLQ
Sbjct: 489 HESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQ 548
Query: 1261 EMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
E+KESVQSD RHQVSLLV PMLQALDAAFAHYDAD+QKR++KSG R NG
Sbjct: 549 EIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADIQKRSAKSGERPNG 597
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Solanum lycopersicum]
Length = 599
Score = 652 bits (1683), Expect = 0.0
Identities = 322/469 (68%), Positives = 386/469 (82%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWSVKP 180
RIKLLQE+SELQ +H+ELV G L+E EFW+ +K+LL+ +++++PKQR+ALKN+MWSVKP
Sbjct: 129 RIKLLQENSELQNLHRELVIAGILSETEFWAARKKLLEQSENKKPKQRVALKNDMWSVKP 188
Query: 181 LSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTRN 360
LSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KM+EKEFWTKYSRA+YLHST+N
Sbjct: 189 LSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHSTKN 248
Query: 361 VVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLHG 540
+V VFLK+DDML +EARRKIRRVDPT+D+EADEGDDY+HLPDHGL G
Sbjct: 249 IVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLPQG 308
Query: 541 EAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDEK 720
E K++L+ QYEP++RSF Q LNQHAAVVLQGRV+DVELGDTRSVAEA R Q E + E
Sbjct: 309 ETKEILEPQYEPFKRSFSQYLNQHAAVVLQGRVIDVELGDTRSVAEAFTRTNQAEQATEV 368
Query: 721 LNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSAT 900
+ N ++ ++SR AEIEDLQGPRDP VALLSIKDPRDYFDSQQANA+KALGD +
Sbjct: 369 SDENAYRERVKKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKALGDAETGI 428
Query: 901 EPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNSP 1080
L+ VS +A+ SL++ I +I GL EPI++ ++ALKV N L+Q+ISSTK HLG +P
Sbjct: 429 RQLKFRVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNLLSQNISSTKYHLGKNP 488
Query: 1081 NESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKLQ 1260
+ESVLD LP TK ELL HW ++QELLK FWSSYP+TTKY Y KV R+KD MS+IYPKLQ
Sbjct: 489 HESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQ 548
Query: 1261 EMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
E+KESVQSD RHQVSLLV PMLQALDAAFAHYDAD+QKR+++SG R NG
Sbjct: 549 EIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADLQKRSARSGERPNG 597
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
protein product [Vitis vinifera]
Length = 602
Score = 625 bits (1611), Expect = e-176
Identities = 311/470 (66%), Positives = 377/470 (80%), Gaps = 1/470 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
RIKLL+EDSELQ +HK+ V G LTEAEFW+ +K+LLD N SR KQR+ K+ M S +K
Sbjct: 131 RIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLK 190
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
PL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+LNFVP KMTEK+FW KY RA+YLH TR
Sbjct: 191 PLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTR 250
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N V VFLK DD+LANEARRKIRRVDPT+D+EAD+GDDY+HLPDHG+
Sbjct: 251 NTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFR 310
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
+K+++D QYE YRR+ QDLN+HAAVVL+GR +DVEL DTR+VAEAL ++K+ E ++E
Sbjct: 311 DGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANE 370
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
K + ++ ++ +RISR EIEDLQ PRD A L IKDPRDYFDSQQANALK LGDT +
Sbjct: 371 KSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAG 430
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
++ ++ +S +AY SLR I +IK +GL +PI+ DIALKVLNGLTQ+ISSTK HLG +
Sbjct: 431 SKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKN 490
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
P ESVLD LP +TKEELL HW ++QELL+ FWSSYP+TT YLY K +R+KD MS+IYPKL
Sbjct: 491 PQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKL 550
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
QE+KESVQSDFRHQVSLLV PMLQALDAAFAHYDAD QKR+++SG R NG
Sbjct: 551 QEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNG 600
>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
Length = 409
Score = 598 bits (1541), Expect = e-168
Identities = 296/408 (72%), Positives = 347/408 (85%)
Frame = +1
Query: 163 MWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQY 342
MW+VKPLSDGQSN+VTFNLTPEIIHQIF+EKPAVRQAYLNFVP +++EK+FWTKYS+A+Y
Sbjct: 1 MWTVKPLSDGQSNKVTFNLTPEIIHQIFSEKPAVRQAYLNFVPHRLSEKDFWTKYSKAEY 60
Query: 343 LHSTRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 522
L+S+RNV VFLKRDDMLA+EARRK+RRVDPTVD++ADEGDDYIHL D
Sbjct: 61 LNSSRNVSVAAAEAALDEELAVFLKRDDMLADEARRKVRRVDPTVDMQADEGDDYIHLQD 120
Query: 523 HGLLHGEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQD 702
HGL+H E KD ++SQYEP+R+SF QDLNQH AVVLQGRV+D EL DTRSVAEA++R KQ
Sbjct: 121 HGLVHDEPKDYMESQYEPFRKSFSQDLNQHGAVVLQGRVLDAELRDTRSVAEAIIRIKQA 180
Query: 703 ELSDEKLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALG 882
ELSDE RNLE+ +SDRISR AE+EDLQGPRDPAVA LSIKDPRDYFDSQQANALKAL
Sbjct: 181 ELSDEVSTRNLERDISDRISRMAEMEDLQGPRDPAVAPLSIKDPRDYFDSQQANALKALA 240
Query: 883 DTGSATEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKL 1062
D L+S VS+ +AY SL+N++ + MGL EP+M+ ++ALKVL+ LTQ+ISSTK
Sbjct: 241 DGSGGERTLKSSVSSHEAYGSLKNLVSHNRVMGLTEPVMSHEVALKVLSALTQNISSTKF 300
Query: 1063 HLGNSPNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSK 1242
HLG++P+ESVLD LPK TK+ELL W +VQELLK FWSSYP+TTKYLY KV R+KD MS+
Sbjct: 301 HLGSNPHESVLDRLPKSTKDELLIQWTSVQELLKHFWSSYPITTKYLYTKVTRMKDAMSQ 360
Query: 1243 IYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASK 1386
IY KLQE+KESV SDFRHQVSLLVHPMLQALDAAFAHYDADVQ+R++K
Sbjct: 361 IYLKLQEIKESVPSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSTK 408
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 570 bits (1470), Expect = e-160
Identities = 284/442 (64%), Positives = 350/442 (79%), Gaps = 1/442 (0%)
Frame = +1
Query: 7 KLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VKPL 183
K+ + SELQ +HK+ V G LTEAEFW+ +K+LLD N SR KQR+ K+ M S +KPL
Sbjct: 176 KVKWDCSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPL 235
Query: 184 SDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTRNV 363
+DG++NRVTFNLTPEIIHQIFAEKPAV QA+LNFVP KMTEK+FW KY RA+YLH TRN
Sbjct: 236 TDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNT 295
Query: 364 VXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLHGE 543
V VFLK DD+LA+EARRKIRRVDPT+D+EAD+GDDY+HLPDHG+
Sbjct: 296 VAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDG 355
Query: 544 AKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDEKL 723
+K+++D QYE YRR+ QDLN+HAAVVL+GR +DVEL DTR+VAEAL ++K+ E ++EK
Sbjct: 356 SKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKS 415
Query: 724 NRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSATE 903
+ ++ ++ +RISR EIEDLQ PRD A L IKDPRDYFDSQQANALK LGDT + ++
Sbjct: 416 DGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSK 475
Query: 904 PLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNSPN 1083
++ +S+ +AY SLR I +IK +GL +PI+ DIALKVLNGLTQ+ISSTK HLG +P
Sbjct: 476 QIKCSLSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQ 535
Query: 1084 ESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKLQE 1263
ESVLD LP +TKEELL HW ++QELL+ FWSSYP+TT YLY K +R+KD MS+IYPKLQE
Sbjct: 536 ESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQE 595
Query: 1264 MKESVQSDFRHQVSLLVHPMLQ 1329
+KESVQSDFRHQVSLLV PMLQ
Sbjct: 596 IKESVQSDFRHQVSLLVQPMLQ 617
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 543 bits (1398), Expect = e-151
Identities = 276/464 (59%), Positives = 350/464 (75%), Gaps = 1/464 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
R+ LL+EDSELQ +H++LV GG LTE EFW+ +K LLD + KQR K+ M + V+
Sbjct: 135 RMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASKQRAGFKSAMLADVR 194
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
PL+DG++N+VTF+LTPEIIHQIFAEKPAV QA+L FVP KM+E++FWTKY RA+YLH T+
Sbjct: 195 PLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWTKYCRAEYLHRTK 254
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N V VFLK DD+LA+EARRKIRRVDPTVD+ AD GDDY HLP HG+L
Sbjct: 255 NSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDYSHLPGHGILR 314
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
+K+ +DS+ E +R+ LQDLN+HAAVVL+GR +DVELGDTR+VAEAL R+KQ E++ E
Sbjct: 315 DGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAEALARSKQAEVATE 374
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ ++ +R+S+ EIEDLQ PR A L IKDPR+YFDSQ+ANA KA GDTGS
Sbjct: 375 TSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQRANAFKATGDTGSG 434
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
+S QAY+SLR I ++K +G +PI+ D+ALKVLN + Q +SST LG +
Sbjct: 435 VNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQQLSSTDPQLGKN 494
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
P +VLDMLP TKEELL+HW ++QELL+ FWSSYPLTT +L+ KVNRVKD M++IY KL
Sbjct: 495 PQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNRVKDAMAQIYRKL 554
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKS 1389
E+KESVQS+FRHQVSLLV PMLQ LD AF HYDA++QKR++K+
Sbjct: 555 PEVKESVQSEFRHQVSLLVKPMLQVLDEAFKHYDAEMQKRSTKT 598
>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Citrus sinensis]
Length = 597
Score = 540 bits (1390), Expect = e-151
Identities = 278/471 (59%), Positives = 353/471 (74%), Gaps = 2/471 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
RIKLLQE+SELQ +H++ V G LTEAEFW+ +K+LLD++ S++ KQR+ K+ M S ++
Sbjct: 131 RIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDIDPSKKSKQRVGFKSAMISDIR 190
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P +DG++N+VTF+LTPEII QIFAEKPAV +A+LNFVP KMTE EFWTKY RA+YL T+
Sbjct: 191 PATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTK 250
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N VFLK DD+LANE R+KIRRVDPT+D+EADEGDDY HLPDHG+
Sbjct: 251 NYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFR 310
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGD-TRSVAEALVRNKQDELSD 714
K+ + Q E YRR+ LQDLN+HAAVVL+GR +DVE D TR++AEAL R+K+ +
Sbjct: 311 DGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKR---GN 367
Query: 715 EKLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGS 894
E + N ++ DR R AEIEDLQ P +A LSIKD R+YFDSQQAN LKA D
Sbjct: 368 EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKASRD--- 424
Query: 895 ATEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGN 1074
A ++ +S +AY S+R+ I +IK+MGL +PI+N ++ALKV +GLT +ISS K HLG
Sbjct: 425 AQASMKCSLSKQEAYRSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGK 484
Query: 1075 SPNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPK 1254
+P E+VLD LP TKE+LL HW ++QELLK FWSSYP+TT YLY KVNR+KD +S IYP+
Sbjct: 485 NPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQ 544
Query: 1255 LQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
L+EMKES+ +D RHQVSLLV PM QALDAA HYDAD+QKR++KSG + NG
Sbjct: 545 LEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNG 595
>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555944|gb|ESR65958.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 564
Score = 538 bits (1387), Expect = e-150
Identities = 277/471 (58%), Positives = 354/471 (75%), Gaps = 2/471 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
RIKLLQE+SELQ +H++ V G LTEAEFW+ +K+LLD + S++ KQR+ K+ M S ++
Sbjct: 98 RIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPSKKSKQRVGFKSAMISDIR 157
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P +DG++N+VTF+LTPEII QIFAEKPAV +A+LNFVP KMTE EFWTKY RA+YL T+
Sbjct: 158 PATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTK 217
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N VFLK DD+LANE R+KIRRVDPT+D+EADEGDDY HLPDHG+
Sbjct: 218 NYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFR 277
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGD-TRSVAEALVRNKQDELSD 714
K+ + Q E YRR+ LQDLN+HAAVVL+GR +DVE D TR++AEAL R+K+ +
Sbjct: 278 DGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKR---GN 334
Query: 715 EKLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGS 894
E + N ++ DR R AEIEDLQ P +A LSIKD R+YFDSQQAN LKA D+ +
Sbjct: 335 EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKASRDSQA 394
Query: 895 ATEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGN 1074
+ ++ +S +AY S+R+ I +IK+MGL +PI+N ++ALKV +GLT +ISS K HLG
Sbjct: 395 S---MKCSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGK 451
Query: 1075 SPNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPK 1254
+P E+VLD LP TKE+LL HW ++QELLK FWSSYP+TT YLY KVNR+KD +S IYP+
Sbjct: 452 NPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQ 511
Query: 1255 LQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
L+EMKES+ +D RHQVSLLV PM QALDAA HYDAD+QKR++KSG + NG
Sbjct: 512 LEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNG 562
>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555943|gb|ESR65957.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 597
Score = 538 bits (1387), Expect = e-150
Identities = 277/471 (58%), Positives = 354/471 (75%), Gaps = 2/471 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
RIKLLQE+SELQ +H++ V G LTEAEFW+ +K+LLD + S++ KQR+ K+ M S ++
Sbjct: 131 RIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPSKKSKQRVGFKSAMISDIR 190
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P +DG++N+VTF+LTPEII QIFAEKPAV +A+LNFVP KMTE EFWTKY RA+YL T+
Sbjct: 191 PATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTK 250
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N VFLK DD+LANE R+KIRRVDPT+D+EADEGDDY HLPDHG+
Sbjct: 251 NYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFR 310
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGD-TRSVAEALVRNKQDELSD 714
K+ + Q E YRR+ LQDLN+HAAVVL+GR +DVE D TR++AEAL R+K+ +
Sbjct: 311 DGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKR---GN 367
Query: 715 EKLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGS 894
E + N ++ DR R AEIEDLQ P +A LSIKD R+YFDSQQAN LKA D+ +
Sbjct: 368 EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKASRDSQA 427
Query: 895 ATEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGN 1074
+ ++ +S +AY S+R+ I +IK+MGL +PI+N ++ALKV +GLT +ISS K HLG
Sbjct: 428 S---MKCSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGK 484
Query: 1075 SPNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPK 1254
+P E+VLD LP TKE+LL HW ++QELLK FWSSYP+TT YLY KVNR+KD +S IYP+
Sbjct: 485 NPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQ 544
Query: 1255 LQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
L+EMKES+ +D RHQVSLLV PM QALDAA HYDAD+QKR++KSG + NG
Sbjct: 545 LEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNG 595
>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
gi|462419824|gb|EMJ24087.1| hypothetical protein
PRUPE_ppa003591mg [Prunus persica]
Length = 563
Score = 521 bits (1342), Expect = e-145
Identities = 272/465 (58%), Positives = 342/465 (73%), Gaps = 1/465 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEM-WSVK 177
R+KLLQEDSELQ +H + V G LTE+EFW+ +K+LLD + + KQR+ ++ M K
Sbjct: 100 RMKLLQEDSELQKLHMQFVISGVLTESEFWATRKKLLDGDSRTKSKQRVGFRSSMILDTK 159
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P++DG+ N+VTFNLTPEI +QIFA KPAV QA+L VP KMTEK+FWTKY RA+YLHSTR
Sbjct: 160 PMTDGRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSKMTEKDFWTKYFRAEYLHSTR 219
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N V +FLK D +LA+EARRKIRRVDPT+D+EAD+GDDY HLPDHG+
Sbjct: 220 NAVAAAAEAAEDEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYTHLPDHGIFR 279
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
+KDV + Q E YRR+ QDLN+ AVVLQGR VDV+L D R+VAEAL++++++ SDE
Sbjct: 280 DGSKDVTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVAEALMQSRRE--SDE 337
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ E++ DRI+R EIEDLQ D VA L IKDPRDYFD+QQ NALK L D+ +
Sbjct: 338 ----SAEQERLDRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDTQQVNALKTLDDSRTG 393
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
TE + ++ +AY SLR I IK +GL + +IA+ VLNGLTQ+ISSTK LG +
Sbjct: 394 TEQKKCSLTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGLTQNISSTKYQLGKN 453
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
P +SVLD LP TKEELL HW ++QELL+ FWSSYP+TT YL KV R+KD MS+IY +L
Sbjct: 454 PQDSVLDSLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTKVGRLKDAMSQIYRQL 513
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 1392
+E+K QSDFRHQVSLLV PM QALDAAF H+DAD+QKRA++SG
Sbjct: 514 EEIK---QSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSG 555
>ref|XP_007015592.1| BSD domain (BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins), putative isoform 1
[Theobroma cacao] gi|508785955|gb|EOY33211.1| BSD domain
(BTF2-like transcription factors, Synapse-associated
proteins and DOS2-like proteins), putative isoform 1
[Theobroma cacao]
Length = 646
Score = 509 bits (1311), Expect = e-141
Identities = 269/519 (51%), Positives = 348/519 (67%), Gaps = 50/519 (9%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
RIKLL+EDSELQ +HK+ V G LTEAEFW+ +K+LLD +++ KQRL K+ M S +K
Sbjct: 126 RIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREANKKTKQRLGFKSAMISDIK 185
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHST+
Sbjct: 186 PSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHSTK 245
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N V VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 246 NSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGIFR 305
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
+K+V +S+ E YRR+ QD+N+HAAVVL+GR VDVEL DTRSVAEAL R+KQ+ +
Sbjct: 306 DGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQESSTKG 365
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ + ++ DR+SR EIEDLQ P + +A L IKDPRDYFDSQQ NAL+ GD +
Sbjct: 366 ESYGDTSRERLDRVSRMTEIEDLQAPNNLPLAPLCIKDPRDYFDSQQVNALRTSGDELAG 425
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
TE ++ +S+ + Y SLR I IK MGL +PI+ ++A +V + LTQSIS+TK ++G +
Sbjct: 426 TEQIKCSLSSQEVYGSLRESISVIKAMGLKDPIVKPEVAHQVFDALTQSISTTKYNIGKN 485
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
P ESVLD LPK KEELL HW ++ ELL+ FW+SYP+TT YLY KVN Y KL
Sbjct: 486 PQESVLDRLPKKIKEELLHHWTSILELLRHFWASYPITTSYLYTKVNAALVLTLLSYQKL 545
Query: 1258 Q-------------------------------------------------EMKESVQSDF 1290
+ E+K SV SD
Sbjct: 546 EAGKQTEGCHVTYLSTARVVLSNYPQVPFISSLLFYLLGSSDAKASYVWMEIKGSVPSDL 605
Query: 1291 RHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
RHQVSLL+ PM QALDAA HY+AD+QKR+++SG R NG
Sbjct: 606 RHQVSLLIRPMHQALDAAIQHYEADMQKRSARSGERPNG 644
>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Cicer arietinum]
Length = 586
Score = 508 bits (1307), Expect = e-141
Identities = 258/470 (54%), Positives = 344/470 (73%), Gaps = 1/470 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEM-WSVK 177
RIKLLQEDS+LQ +HK+LV G LTE+EFW+ KK+LLD ++SR+ KQR+ KN + + K
Sbjct: 122 RIKLLQEDSKLQKLHKDLVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDTK 181
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P SDG+ N+V F LTPEI +QIFA KPAV QA+LNFVP KM+E +FW KY +A+Y+HST+
Sbjct: 182 PTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMSEVDFWNKYFKAEYIHSTK 241
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N + VFLK D++L NEAR+K+RRVDPT+D+EAD+GDDY HLPDHG+
Sbjct: 242 NTIAAAAEAAEDEDLAVFLKDDEILENEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFR 301
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
+K+ ++Q YRR+ LQDLN+ + VVL+G+ +D+++ R+VAE L R KQ+
Sbjct: 302 DGSKETAEAQNTFYRRTLLQDLNRQSEVVLEGKTLDMDMEHPRTVAEVLARRKQES---- 357
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ +E++ +RIS+ +IEDLQ D A L IKDPRDYFDSQQ NALK+L D+ +
Sbjct: 358 --DGVIEEERRNRISKMTQIEDLQAQDDHRFAPLCIKDPRDYFDSQQVNALKSLDDSLAG 415
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
E +R + + +AY SLR I IK +GL +P+++ ++A KVLNGLT++ISSTK HLG S
Sbjct: 416 KEQIRCNLGSEEAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNGLTKNISSTKSHLGKS 475
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
ESVLD+LP TKE+LL HW QELL+ FWSSYP+TT+ L +K R+KD +S+IY KL
Sbjct: 476 SQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNKTKRMKDAISQIYSKL 535
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
+E+K S +SD RHQVSL+VHPM QALDAA HYDADV+KR ++ GT+ NG
Sbjct: 536 EEIKVSAKSDLRHQVSLVVHPMQQALDAALLHYDADVRKRNAR-GTKPNG 584
>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
communis] gi|223529828|gb|EEF31761.1| TFIIH basal
transcription factor complex subunit, putative [Ricinus
communis]
Length = 597
Score = 501 bits (1289), Expect = e-139
Identities = 265/473 (56%), Positives = 348/473 (73%), Gaps = 4/473 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
R+ LL+E+ ELQ +HK+ V LT++EFW+ +K+LL+ SR+ KQR+ LK+ M + K
Sbjct: 126 RMNLLRENLELQKLHKQFVSDRVLTDSEFWATRKKLLNGEFSRKSKQRVGLKSVMLADSK 185
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
PL DGQ+N+VTFNLTPEI+ +IFAEKPAV QAYL+ VP KM+E++FWTKY RA+YL +R
Sbjct: 186 PLIDGQTNKVTFNLTPEIVREIFAEKPAVHQAYLSLVPNKMSERDFWTKYCRAEYLQRSR 245
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N+ +FLK DD+LA+E R+KIR VDPT+D+EAD+GDDY HLPDHG++
Sbjct: 246 NIHAAAAEAAEDEELALFLKPDDILASETRQKIRCVDPTLDMEADQGDDYTHLPDHGIVR 305
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVE-LGDTRSVAEALVRNKQD-ELS 711
+KDV++SQ+EPYRR+ LQDLN+HAAVVL+G +D E L DT++VA+AL R+K+ +
Sbjct: 306 DGSKDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQDTKAVADALARSKRGIKTI 365
Query: 712 DEKLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTG 891
+ + + N ++ S+RIS+ EIEDLQG D +A L IKDPRDYFDSQQA+ALK D
Sbjct: 366 NREADGNANQERSNRISQMMEIEDLQGSNDHHLAPLCIKDPRDYFDSQQASALKNSRDIP 425
Query: 892 SATEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLG 1071
S TE R +S+ +AY SLR+ I K MGL++PI+ +IA KVL+ LT +ISSTK HLG
Sbjct: 426 SGTEAARCSLSSQEAYASLRDSITQTKAMGLNDPIVKPEIATKVLSILTHNISSTKYHLG 485
Query: 1072 NSPNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYP 1251
+ ESVLD LP KEELL HW +++ELL+ +WSSYP+TT YLY KV+R+KD MSKI
Sbjct: 486 KNSRESVLDRLPNTIKEELLHHWMSIEELLRHYWSSYPITTAYLYAKVSRLKDAMSKIDS 545
Query: 1252 KLQEMKESVQSDFR-HQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
+LQEMKESVQSD H SL + P AL+AA HYDAD+QKR++KS R NG
Sbjct: 546 QLQEMKESVQSDLXFHATSLGIVP---ALEAAMQHYDADLQKRSAKSAERPNG 595
>ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-3-like isoform X1 [Glycine max]
gi|571483735|ref|XP_006589333.1| PREDICTED: probable RNA
polymerase II transcription factor B subunit 1-3-like
isoform X2 [Glycine max]
Length = 587
Score = 499 bits (1284), Expect = e-138
Identities = 254/470 (54%), Positives = 340/470 (72%), Gaps = 1/470 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEM-WSVK 177
RIKLLQEDS+LQ +HKELV G LTE+EFW+ KK+LLD ++SR+ KQR+ KN + + K
Sbjct: 123 RIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDTK 182
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P+SDG+ N+V F LTPEI +QIFA KPAV QA+LNFVP KM E +FW KY +A+YLHST+
Sbjct: 183 PMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMNEVDFWNKYFKAEYLHSTK 242
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N V VFLK D++L EAR+K+RRVDPT+D+EAD+GDDY HLPDHG+
Sbjct: 243 NAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFR 302
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
+KD+ ++Q Y+R+ LQDLN+ AVVL+G+ +D+E+ R+VAE L R KQ+
Sbjct: 303 DGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRKQE----- 357
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ ++++ +RIS+ IEDLQ + A L IKDPRDYFDSQQANA+K L D+ +
Sbjct: 358 -CDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAVKTLDDSQAG 416
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
E ++ + + +AYDSLR I IK GL +P+ + D+ALKVLNGLT++I+STK HLG S
Sbjct: 417 MEQMKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNITSTKYHLGKS 476
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
ESVLD+LP TKE+LL HW QELL+ FWSSYP++T+ L K R+KD +S+IY KL
Sbjct: 477 SQESVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSKTRRLKDSISQIYSKL 536
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
+++K S +SD RH VSL+VHPM QAL+AA HY+AD++KR ++ G + NG
Sbjct: 537 EDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNAR-GQKPNG 585
>ref|XP_007144178.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris]
gi|561017368|gb|ESW16172.1| hypothetical protein
PHAVU_007G134900g [Phaseolus vulgaris]
Length = 588
Score = 498 bits (1283), Expect = e-138
Identities = 255/470 (54%), Positives = 341/470 (72%), Gaps = 1/470 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEM-WSVK 177
RIKLLQEDS+LQ +HKELV G LTE+EFW+ KK+LLD ++SR+ KQR+ KN + + K
Sbjct: 123 RIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDTK 182
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P+SDG+ N+V F LTPEI +QIF KPAV QA+LNFVP KM E +FW KY +A+YLHST+
Sbjct: 183 PMSDGRINQVKFQLTPEIKYQIFTLKPAVHQAFLNFVPSKMNEVDFWNKYFKAEYLHSTK 242
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N V VFLK D++L EAR+K+RRVDPT+D+EAD+GDDY HLPDHG+
Sbjct: 243 NAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFR 302
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
+K++ ++Q Y+R+ LQDLN+ AVVL+G+ +D+E+ + R+VAE L R KQ+ SDE
Sbjct: 303 DGSKEISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMENPRTVAEILARRKQE--SDE 360
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ +++ +RIS+ IEDLQ D A L IKDPRDYFD QQANA+K L D+
Sbjct: 361 VVG---DEERRNRISKMTPIEDLQSQDDHRYAPLCIKDPRDYFDFQQANAVKTLDDSQPG 417
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
E + + + +AY SLR I I+ GL +P+ + ++ALKVL+GLT++ISS+K HLG +
Sbjct: 418 MEQMMCSLGSEEAYGSLRASISKIQTTGLRDPLFSPEVALKVLHGLTKNISSSKYHLGKT 477
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
ESVLD+LP TKE+LL HW QELL+ +WSSYP+TT+ L +K R+KD +S+IY KL
Sbjct: 478 SQESVLDILPNTTKEKLLDHWVCSQELLRHYWSSYPVTTQNLVNKTRRLKDSISQIYSKL 537
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
+E+K S QSD RHQVSL+VHPM QALDAA HYDAD++KR ++ G++ NG
Sbjct: 538 EEIKVSAQSDLRHQVSLVVHPMQQALDAALLHYDADIRKRNAR-GSKSNG 586
>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
gi|482575779|gb|EOA39966.1| hypothetical protein
CARUB_v10008654mg [Capsella rubella]
Length = 593
Score = 494 bits (1273), Expect = e-137
Identities = 256/472 (54%), Positives = 342/472 (72%), Gaps = 3/472 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
R KLL+E+SELQ +HK+ V LTE EFW+ +K+LL + R+ KQ+L LK+ M S +K
Sbjct: 126 RFKLLKENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGLKSMMVSGIK 185
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P +DG++NRVTFNLTPEII QIFAEKPAVRQA++++VP KMTEK+FWTKY RA+YL+ST+
Sbjct: 186 PSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFISYVPSKMTEKDFWTKYFRAEYLYSTK 245
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N VFLK D++LA E R+KIRRVDPT+D+EADEGDDY HL DHG+
Sbjct: 246 NTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADEGDDYTHLMDHGIQR 305
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
+DV++ Q E ++RS LQDLN+HAAVVL+GR +DV+ DTR VAEAL R KQ +D
Sbjct: 306 DGTRDVVEPQNEQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIVAEALTRVKQVSKADG 365
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ ++ ++ +R+SR A +EDLQ P++ +A LSIKDPRDYF+SQQ N L A
Sbjct: 366 ETGKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNA----PRG 421
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
T+ L+ V +A+ L+ I +I+ GL +P++ +++ +V + LT++IS+ K +G +
Sbjct: 422 TKGLKRNVH--EAFGLLKESIVEIRARGLSDPLIKPEVSFEVFSSLTRTISTAKNIIGKN 479
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
P ES LD LPK TK+E+L HW ++QELL+ FWSSYP+TT YL+ KV ++KD MS Y KL
Sbjct: 480 PRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKL 539
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKS--GTRHNG 1407
+ MKESVQSD RHQ+SLLV PM QALDAAF HY+AD+Q+R +KS G R NG
Sbjct: 540 EAMKESVQSDLRHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSGGERPNG 591
>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
[Arabidopsis thaliana]
gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
Full=Probable RNA polymerase II transcription factor B
subunit 1-1; AltName: Full=General transcription and DNA
repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195172|gb|AEE33293.1| probable RNA polymerase II
transcription factor B subunit 1-1 [Arabidopsis thaliana]
Length = 591
Score = 494 bits (1272), Expect = e-137
Identities = 255/470 (54%), Positives = 337/470 (71%), Gaps = 1/470 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
R KLL+E+SELQ +HK+ V LTE EFW+ +K+LL + R+ KQ+L LK+ M S +K
Sbjct: 126 RFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGLKSMMVSGIK 185
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P +DG++NRVTFNLTPEII QIFAEKPAVRQA++N+VP KMTEK+FWTKY RA+YL+ST+
Sbjct: 186 PSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYSTK 245
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N VFLK D++LA E R KIRRVDPT+D+EAD+GDDY HL DHG+
Sbjct: 246 NTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYTHLMDHGIQR 305
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
DV++ Q + ++RS LQDLN+HAAVVL+GR +DVE DTR VAEAL R KQ +D
Sbjct: 306 DGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKADG 365
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ ++ ++ +R+SR A +EDLQ P++ +A LSIKDPRDYF+SQQ N L +
Sbjct: 366 ETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL----NVPRG 421
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
+ L+ V +AY L+ I +I+ GL +P++ +++ +V + LT++I++ K G +
Sbjct: 422 AKGLKRNVH--EAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKNINGKN 479
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
P ES LD LPK TK+E+L HW ++QELLK FWSSYP+TT YL+ KV ++KD MS Y KL
Sbjct: 480 PRESFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMSNTYSKL 539
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
+ MKESVQSD RHQVSLLV PM QALDAAF HY+ D+Q+R +KSG R NG
Sbjct: 540 EAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPNG 589
>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
gi|550334091|gb|EEE90962.2| transcription factor-related
family protein [Populus trichocarpa]
Length = 603
Score = 493 bits (1270), Expect = e-137
Identities = 259/475 (54%), Positives = 346/475 (72%), Gaps = 6/475 (1%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
R+ +LQE+SELQ +HK V G LTEAEFW+ +K+LL N S++ KQR LK+ + S K
Sbjct: 127 RMNMLQENSELQNLHKRFVSDGILTEAEFWATRKKLLGGNFSKKSKQRTGLKSFVLSDTK 186
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P +DG++N+VTF LTPEI+ ++FAEKPAV +AYL+ VP+KM+E++FW+KY RA+YL +
Sbjct: 187 PSTDGRTNKVTFTLTPEIVREVFAEKPAVHRAYLDLVPKKMSERDFWSKYCRAEYLQHAK 246
Query: 358 NV---VXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHG 528
N +FLK DD+LA+E RRKIR VDPT+++EADEGDDY HLPDHG
Sbjct: 247 NANAAAAAAAEAAEDEELALFLKPDDILASETRRKIRCVDPTLNMEADEGDDYTHLPDHG 306
Query: 529 LLHGEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVE-LGDTRSVAEALVRNKQDE 705
++ +K++ +SQ+E Y R+ Q+LN+HAAVVLQG +D E L DT++VAEAL ++KQ +
Sbjct: 307 IVRDGSKEITESQHELYIRTLSQELNRHAAVVLQGTPIDEEQLKDTQTVAEALKQSKQGQ 366
Query: 706 -LSDEKLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALG 882
S+E+ + N + RIS+ EI+DLQ D +A LSIKDPRDYFDSQQA ALK
Sbjct: 367 NASNEETDMNANQDRLSRISKMMEIDDLQASSDLPLAPLSIKDPRDYFDSQQATALKNSR 426
Query: 883 DTGSATEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKL 1062
DT T+P++ +SA ++Y SLR+ I IK GL +PI+ ++A+KVL+ LT +ISSTK
Sbjct: 427 DTSIGTDPVKRILSAEESYASLRDSISLIKTTGLVDPIIKPEVAVKVLSVLTHNISSTKY 486
Query: 1063 HLGNSPNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSK 1242
G + SVLD LP KEELL HW ++QELLK +WSSYP+TT YLY KV+R+KD MSK
Sbjct: 487 DTGKNHGLSVLDTLPNTIKEELLYHWTSLQELLKHYWSSYPITTTYLYTKVSRLKDAMSK 546
Query: 1243 IYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
I +LQE+KESVQSD RHQV+LL+ PM QAL+AA HYDA++QKR+++SG R NG
Sbjct: 547 IDSQLQELKESVQSDLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSGDRSNG 601
>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
Length = 592
Score = 493 bits (1268), Expect = e-136
Identities = 256/471 (54%), Positives = 339/471 (71%), Gaps = 2/471 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEMWS-VK 177
R KLL+E+SELQ +HK+ V LTE EFW+ +K+LL + R+ KQ++ LK+ M S +K
Sbjct: 126 RFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQVGLKSMMVSGIK 185
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P +DG++NRVTFNLTPEII QIFAEKPAVRQA++N+VP KMTEK+FWTKY RA+YL+ST+
Sbjct: 186 PSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYSTK 245
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N VFLK D++LA E R+KIRRVDPT+D+EAD+GDDY HL DHG+
Sbjct: 246 NTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYTHLMDHGIQR 305
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
DV++ Q + +RRS LQDLN+HAAVVL+GR +DVE DTR VAEAL R KQ +D
Sbjct: 306 DGTMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKADG 365
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ ++ + +R+SR A +EDLQ P++ +A LSIKDPRDYF+SQQ N L +
Sbjct: 366 ETTKDANLERLERMSRLAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL----NVPRG 421
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
+ L+ V +AY L+ I +I+ GL +P++ +++ +V + LT++IS+ K +G +
Sbjct: 422 AKGLKRNVH--EAYGLLKESILEIRATGLSDPLIRPEVSFEVFSSLTRTISTAKNIIGKN 479
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
P ES LD LPK TK+E+L HW ++QELL+ FWSSYP+TT YL+ KV ++KD MS Y KL
Sbjct: 480 PRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKL 539
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKS-GTRHNG 1407
+ MKESVQSD RHQVSLLV PM QALDAAF HY+AD+Q+R +KS G R NG
Sbjct: 540 EAMKESVQSDLRHQVSLLVRPMQQALDAAFQHYEADLQRRTAKSGGERPNG 590
>ref|XP_003591640.1| General transcription factor IIH subunit [Medicago truncatula]
gi|355480688|gb|AES61891.1| General transcription factor
IIH subunit [Medicago truncatula]
Length = 586
Score = 491 bits (1263), Expect = e-136
Identities = 252/470 (53%), Positives = 335/470 (71%), Gaps = 1/470 (0%)
Frame = +1
Query: 1 RIKLLQEDSELQTMHKELVFGGTLTEAEFWSRKKELLDLNDSRRPKQRLALKNEM-WSVK 177
R+KLL EDS+L+ +H ELV LTE+EFW+ KK+LLD ++SR+ KQR+ KN + + K
Sbjct: 123 RMKLLGEDSKLKKIHMELVMSDKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDTK 182
Query: 178 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHSTR 357
P SDG+ N+V F LTPEI +QIFA KPAV QA+LNFVP KM+E +FW KY +A+YLHST+
Sbjct: 183 PTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMSEVDFWNKYFKAEYLHSTK 242
Query: 358 NVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLLH 537
N + VFLK D++L NEAR+K+RRVDPT+D+EAD+GDDY HLPDHG+
Sbjct: 243 NAIAAAAEAAEDEDLAVFLKDDEILENEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFR 302
Query: 538 GEAKDVLDSQYEPYRRSFLQDLNQHAAVVLQGRVVDVELGDTRSVAEALVRNKQDELSDE 717
+K+ ++Q YRR+ LQDLN+ + VVL+G+ +D+++ R+ EAL R K +
Sbjct: 303 DGSKETSEAQNTLYRRTLLQDLNRQSEVVLEGKTLDIDMEHPRTAVEALARRKHESDGVV 362
Query: 718 KLNRNLEKQLSDRISRSAEIEDLQGPRDPAVALLSIKDPRDYFDSQQANALKALGDTGSA 897
+ RN RIS+ A+IEDLQ D A L IKDPRDYFDSQQANA+K L D+ S
Sbjct: 363 EERRN-------RISKMAQIEDLQAQDDHPFAPLCIKDPRDYFDSQQANAVKTLDDSLSG 415
Query: 898 TEPLRSCVSAGQAYDSLRNVIFDIKEMGLDEPIMNQDIALKVLNGLTQSISSTKLHLGNS 1077
E +R + + +AY SLR I +IK MGL +P+++ ++A KVL+ LT++ISSTK +LG S
Sbjct: 416 KEKIRCNLGSEEAYGSLRESISNIKTMGLRDPLLSHEVAFKVLSELTKNISSTKSNLGKS 475
Query: 1078 PNESVLDMLPKVTKEELLRHWAAVQELLKQFWSSYPLTTKYLYDKVNRVKDHMSKIYPKL 1257
ESVLD+LP TKE+LL HW QELL+ FWSSYP+T + L DK R+KD +S+IY KL
Sbjct: 476 SQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTKQSLVDKARRLKDAISQIYSKL 535
Query: 1258 QEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGTRHNG 1407
+E+K S +SD RHQVSL+VHPM QALDAA HYDAD+ +R +K G++ NG
Sbjct: 536 EEIKVSAKSDLRHQVSLVVHPMQQALDAALLHYDADITRRNAK-GSKRNG 584