BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00007570
         (3025 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial...   913   0.0  
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   790   0.0  
ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp...   789   0.0  
ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron sp...   769   0.0  
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   736   0.0  
ref|XP_007033218.1| maize chloroplast splicing factor CRS1, puta...   726   0.0  
ref|XP_007033217.1| maize chloroplast splicing factor CRS1, puta...   726   0.0  
ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prun...   726   0.0  
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...   724   0.0  
ref|XP_007033219.1| maize chloroplast splicing factor CRS1, puta...   723   0.0  
ref|XP_007033220.1| maize chloroplast splicing factor CRS1, puta...   722   0.0  
gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitat...   721   0.0  
gb|EPS58217.1| hypothetical protein M569_16596, partial [Genlise...   720   0.0  
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp...   709   0.0  
ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phas...   706   0.0  
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp...   705   0.0  
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp...   705   0.0  
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr...   698   0.0  
ref|XP_007033221.1| maize chloroplast splicing factor CRS1, puta...   695   0.0  
ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron sp...   692   0.0  

>gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial [Mimulus guttatus]
          Length = 702

 Score =  913 bits (2360), Expect = 0.0
 Identities = 484/749 (64%), Positives = 570/749 (76%), Gaps = 8/749 (1%)
 Frame = -2

Query: 2613 RIERGSEDSSAQSSKSIPHSRSKLKAPTAPWMAEPLFVKPNE-MESMKRRKNKGLELDRI 2437
            +IE  + DS  +S + IPHSRS +KAPTAPWM  PL VKP+E +ES + R  K     R 
Sbjct: 4    KIEHENRDSRKESPEHIPHSRSTIKAPTAPWMNGPLLVKPSEILESRRTRTRKHFAAGRN 63

Query: 2436 ------GEHPDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPG 2275
                  G HPD DLTGKVGGARG++AMKKI+K  EKLQ+T ++E   KN E+ KFKFAPG
Sbjct: 64   DGEHTGGGHPDVDLTGKVGGARGKVAMKKIYKGIEKLQDTQNVEEPGKNLENLKFKFAPG 123

Query: 2274 ALCGNGDYGGDXXXXXXECSKAAEENLNGNEFDIPLFNAGKEVKSKKLPWEKEEKMVIRM 2095
            AL G+     +        +K A  NL  ++FD+P   A  E KSKK+PWE +E +VIR 
Sbjct: 124  ALWGDKGEVEEN-------TKEARWNLKIDDFDLPFGEAENEAKSKKMPWESDETVVIRR 176

Query: 2094 AKKEKVLTAAESSLDEILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALV 1915
             +KEKV+T+AESSLD +LLERL+ EAAL++KWVKV KAGVTQ+VVDQV   WRN+ELALV
Sbjct: 177  VQKEKVVTSAESSLDPVLLERLKEEAALIRKWVKVKKAGVTQSVVDQVSLFWRNNELALV 236

Query: 1914 KFDLPLSRNMGRAREIVELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARDQG 1735
             FDLPL RNM RAREI+E+KTGGLVVW  K+ LAVYRGCNY SG +  RN+         
Sbjct: 237  NFDLPLCRNMDRAREIIEMKTGGLVVWSNKEFLAVYRGCNYKSGPKQFRNI--------- 287

Query: 1734 NSSSNITYQNTRTVALETSGESNPHELIHGRDGKLENS-EMASLYEREADRLLDELGPRF 1558
                   Y+NT  +A E+           GRD + E+S  M SLYEREADRLLD LGPRF
Sbjct: 288  -------YRNTTAIAQESCD---------GRDSEWESSIHMTSLYEREADRLLDGLGPRF 331

Query: 1557 VDWWMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLG 1378
            VDWWMQKPLPVDGDLLP V+PGFKTPFRL PP  RAK+ D+ELTYLR+LARPLPTHFVLG
Sbjct: 332  VDWWMQKPLPVDGDLLPEVIPGFKTPFRLSPPSTRAKITDNELTYLRKLARPLPTHFVLG 391

Query: 1377 RNRNLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIIL 1198
            RNR LQGLA AILKLWEKCHIAKIAVKWGV NTDNEQMANELK         RN      
Sbjct: 392  RNRKLQGLAVAILKLWEKCHIAKIAVKWGVQNTDNEQMANELKA--------RN------ 437

Query: 1197 YRGKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFH 1018
                DFLP EVAK+VAERE ELT+CQL EEAARLKAS++FSIT ++L +S   GTLSEFH
Sbjct: 438  ----DFLPPEVAKLVAEREMELTKCQLEEEAARLKASKNFSITDENLNNSGFLGTLSEFH 493

Query: 1017 RMRSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESR 838
             + SEI   KKG+TE  V++EAE++RLEKELK+QE KL ILKKKIEKS+KVLDKLKNES 
Sbjct: 494  SIHSEISKEKKGETEFQVQVEAEKERLEKELKNQERKLSILKKKIEKSAKVLDKLKNESS 553

Query: 837  LAEEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITM 658
             ++++PD+E +S EER  LREMGL+  S LVLGRRG+YDGVIEGMHQHWKHRE+VKVITM
Sbjct: 554  FSKQDPDVETISEEERELLREMGLKSDSCLVLGRRGVYDGVIEGMHQHWKHREIVKVITM 613

Query: 657  QRTFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRPKSAAVNLLNKKEALS 478
            Q+  S+V++TAK+VEAESGGILV ++KLKEGHAIIVYRGKNYKRPK A++NLLNK+EALS
Sbjct: 614  QKKLSRVLYTAKFVEAESGGILVSILKLKEGHAIIVYRGKNYKRPKLASINLLNKREALS 673

Query: 477  RSLEIQRLGSLKFFARQREQAILDLKQKL 391
            +S+EIQRLGSLKFFA  R+QAI DL++KL
Sbjct: 674  KSVEIQRLGSLKFFASLRQQAIGDLRRKL 702


>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  790 bits (2041), Expect = 0.0
 Identities = 424/755 (56%), Positives = 526/755 (69%), Gaps = 21/755 (2%)
 Frame = -2

Query: 2577 SSKSIPHSRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVG 2398
            SS+ +  + + +K PTAPWM  PL ++PNE+  + + + K +      E PD  LT KV 
Sbjct: 62   SSQPVSGTDAAIKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVS 121

Query: 2397 GARGRLAMKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYGGDXXXXXXEC 2218
            G RG  AMKKI +S  KLQETH                                      
Sbjct: 122  GGRGAKAMKKIMQSIVKLQETHT------------------------------------- 144

Query: 2217 SKAAEENLNGNEFDIPLFNAGKEVKSK---KLPWEKEEKMVIRMAKKEKVLTAAESSLDE 2047
            S   +EN    EF + L   G +  S+   K+PW K EK+V R  KKEKV+TAAE +LD 
Sbjct: 145  SDETQENTEEFEFGVSLEGIGGDENSRIGGKMPWLKTEKVVFRRTKKEKVVTAAELTLDP 204

Query: 2046 ILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREI 1867
            +LLERLR EA  M+KWVKV KAGVT++VVDQ+H  W++DELA+VKFD+PL RNM RAREI
Sbjct: 205  MLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREI 264

Query: 1866 VELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYS--SARDQGNSSSNIT-YQNTRT 1696
            +E+KT GLV+W KKD L VYRG NY S S++ + M     +  D  NS  N + +++  T
Sbjct: 265  LEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLT 324

Query: 1695 VALETSGESNPHELIHGRDGKLENS-------EMA-------SLYEREADRLLDELGPRF 1558
            ++     ES   E +  +DG+ ++S       EM        SLYEREADRLLD LGPRF
Sbjct: 325  ISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRF 384

Query: 1557 VDWWMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLG 1378
            +DWW  KPLPVD DLLP V+PGF+ PFRL PP  R+KL DDELTYLR+LA  LPTHFVLG
Sbjct: 385  IDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLG 444

Query: 1377 RNRNLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIIL 1198
            RNR LQGLAAAILKLWEK  I KIA+KWG+PNT NEQMANELK LTGGVLLLRNKF IIL
Sbjct: 445  RNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIIL 504

Query: 1197 YRGKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFH 1018
            YRGKDFLP  VA ++ ERE E   CQ+REE ARLKA E+  +T   L ++  TGTLSEF 
Sbjct: 505  YRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQ 564

Query: 1017 RMRSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESR 838
             + +E   LK G TE++VELEAE++RLEKELK QE  LFILK+KIE+S+KVL KL +  R
Sbjct: 565  NIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWR 624

Query: 837  LAEEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITM 658
             A+ + D E+++ EER C R++G ++ SSL+LGRRG++DGVIEG+HQHWKHRE+VKVITM
Sbjct: 625  PADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITM 684

Query: 657  QRTFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSAAVNLLNKKEAL 481
            QR+FSQV++TAK +E+ESGG+LV + KLKEGHAII+YRGKNY+RP K    NLL K+EAL
Sbjct: 685  QRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREAL 744

Query: 480  SRSLEIQRLGSLKFFARQREQAILDLKQKLDELSE 376
            +RSLE+QR+GSLKFFA QR+QAI DLK KL +L +
Sbjct: 745  NRSLEMQRIGSLKFFAYQRQQAISDLKLKLADLQK 779


>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 802

 Score =  789 bits (2038), Expect = 0.0
 Identities = 422/735 (57%), Positives = 534/735 (72%), Gaps = 6/735 (0%)
 Frame = -2

Query: 2556 SRSKLKAPTAPWMAEPLFVKPNE-MESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRL 2380
            S S +K PTAPWM  PL ++PN+ ++  K RK K     +  ++P++ L+GKV G RG+ 
Sbjct: 70   SSSGIKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKT-QNPNDALSGKVSGGRGKK 128

Query: 2379 AMKKIFKSFEKLQETHDLEAFSKNRESR-KFKFAPGALCGNGDYGGDXXXXXXECSKAAE 2203
            AMK I++  +KLQET   E      +++ +F+F PG+L   GD   +         +   
Sbjct: 129  AMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGDVSYEIEEKNPYGEEDNV 188

Query: 2202 ENLNGNEFDIPLFNAGKEVKSKKL----PWEKEEKMVIRMAKKEKVLTAAESSLDEILLE 2035
            E+L G EF + L   G+   S+K+    PWE E ++V R  KKEKV+  AES+LD +LLE
Sbjct: 189  ESLEGVEFGV-LSREGEGRGSRKIGVKMPWESEVRIVYRRMKKEKVVMTAESNLDAMLLE 247

Query: 2034 RLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREIVELK 1855
            RLR EAA ++KWVKV KAGVT+ VVDQ+HF W+N+ELA++KFDLPL RNM RAREIVE+K
Sbjct: 248  RLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFDLPLCRNMDRAREIVEMK 307

Query: 1854 TGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARDQGNSSSNITYQNTRTVALETSG 1675
            TGG VVW K++ L VYRGC+Y    + L++ ++  +    + + NI  Q +    L +SG
Sbjct: 308  TGGFVVWMKQNALVVYRGCSYTLQQKELQH-DFLCSHQNSSFTENIK-QTSIFSPLNSSG 365

Query: 1674 ESNPHELIHGRDGKLENSEMASLYEREADRLLDELGPRFVDWWMQKPLPVDGDLLPAVVP 1495
             S    +  G   +   +   SLY REA+RLLD+LGPR+VDWW  KPLPV+ DLLP VVP
Sbjct: 366  SSEDEMISVGNSEEDSLAMNESLYVREANRLLDDLGPRYVDWWWPKPLPVNADLLPEVVP 425

Query: 1494 GFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAAILKLWEKCHI 1315
            GFK PFRLCPP +R+KL DDELT LR+LAR LPTHFVLGRNR LQGLAAA++KLWEKCHI
Sbjct: 426  GFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAAVVKLWEKCHI 485

Query: 1314 AKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVAERETE 1135
            AKIA+KWG+PNT NE MANELK LTGGVLLLRNKF IILYRGKDFLPS+VA +VAERE E
Sbjct: 486  AKIALKWGIPNTSNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVANLVAEREVE 545

Query: 1134 LTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFHRMRSEIGSLKKGKTEVDVELE 955
            LT+CQL EE AR KA E+  IT +  +SS   GTLSEF      I    K K+EV+V+L 
Sbjct: 546  LTRCQLEEEVARFKAIETLPITMEVSMSSSSVGTLSEF----QTIAEPGKEKSEVEVQLM 601

Query: 954  AERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAEEEPDLEILSNEERVCLRE 775
            +E++RLEKEL++Q++ L ILKKKIEKSS  L KL    R A+E+ D EIL+ EER  LR+
Sbjct: 602  SEKERLEKELRNQQNNLHILKKKIEKSSIALGKLNAAWRPAKEDDDKEILTQEERRSLRQ 661

Query: 774  MGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRTFSQVMHTAKYVEAESGGI 595
            +GL++  SLVLGRRG++DGV+ G+HQHWKHREV+KVITMQ+ FSQV+HTAK +E ESGGI
Sbjct: 662  IGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAKLLETESGGI 721

Query: 594  LVDVVKLKEGHAIIVYRGKNYKRPKSAAVNLLNKKEALSRSLEIQRLGSLKFFARQREQA 415
            L+ V K+KEGHAII+YRGKNY+RP+    NLLNK++AL RSLE+QRLGSLKF+A Q EQA
Sbjct: 722  LISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQRLGSLKFYANQTEQA 781

Query: 414  ILDLKQKLDELSEKM 370
            I DLK KL E + K+
Sbjct: 782  ISDLKLKLVEYTVKI 796


>ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 766

 Score =  769 bits (1986), Expect = 0.0
 Identities = 416/728 (57%), Positives = 513/728 (70%), Gaps = 6/728 (0%)
 Frame = -2

Query: 2556 SRSKLKAPTAPWMAEPLFVKPNE-MESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRL 2380
            S S +K PTAPWM  PL ++PN+ ++  K RK K     +  ++P++ L+GKV G RG+ 
Sbjct: 70   SSSGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDTNFAKT-QNPNDALSGKVSGGRGKK 128

Query: 2379 AMKKIFKSFEKLQETHDLEAFSKNRESR-KFKFAPGALCGNGDYGGDXXXXXXECSKAAE 2203
            AMK I++  +KLQET   E      + + +F+F PG+L G GD   +         +   
Sbjct: 129  AMKMIYQGIDKLQETQIGECTQVETDVKVEFQFPPGSLSGWGDVSYEIEEKNPYGEEDNV 188

Query: 2202 ENLNGNEFDIPLFNAGKEVKSKK----LPWEKEEKMVIRMAKKEKVLTAAESSLDEILLE 2035
            E+L G EF + L   G+   S+K    +PWE EE++V R  KKEKV+  AES+LD +LLE
Sbjct: 189  ESLEGVEFGV-LSREGEGRGSRKSGARMPWESEERIVYRRMKKEKVVRTAESNLDAMLLE 247

Query: 2034 RLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREIVELK 1855
            RLR EAA ++KWVKV KAGVT+ VVDQ+ F W+N+ELA++KFDLPL RNM RAR+IVE+K
Sbjct: 248  RLRGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLPLCRNMDRARDIVEMK 307

Query: 1854 TGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARDQGNSSSNITYQNTRTVALETSG 1675
            TGG VVW K++ L VYRG    S                GNS  +    N          
Sbjct: 308  TGGFVVWMKQNALVVYRGYEMIS---------------VGNSEEDSLVMNE--------- 343

Query: 1674 ESNPHELIHGRDGKLENSEMASLYEREADRLLDELGPRFVDWWMQKPLPVDGDLLPAVVP 1495
                                 SLYEREA+RLLD+LGPR+VDWW  KPLPVD DLLP VVP
Sbjct: 344  ---------------------SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVP 382

Query: 1494 GFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAAILKLWEKCHI 1315
            GFK PFRLCPP +R+KL DDELT LR+LAR LPTHFVLGRNR LQGLAAA++KLWEKCHI
Sbjct: 383  GFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAALVKLWEKCHI 442

Query: 1314 AKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVAERETE 1135
            AKIA+KWG+PN  NE MANELK LTGGVLLLRNKF IILYRGKDFLPS+VAK+VAERE E
Sbjct: 443  AKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVAKLVAEREVE 502

Query: 1134 LTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFHRMRSEIGSLKKGKTEVDVELE 955
            LT+CQL EE AR KA E+  IT +  +SS I GTLSEF      I    K K+EV+V+L 
Sbjct: 503  LTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEF----QTIAEPGKEKSEVEVQLM 558

Query: 954  AERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAEEEPDLEILSNEERVCLRE 775
            +E++RLEKE+++Q+  L+ILKKKIEKSS  L KL    R A+E+ D EIL+ EER  LR+
Sbjct: 559  SEKERLEKEVRNQQDSLYILKKKIEKSSIALGKLNAAWRPAKEDDDKEILTQEERRSLRQ 618

Query: 774  MGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRTFSQVMHTAKYVEAESGGI 595
            +GL++  SLVLGRRG++DGV+ G+HQHWKHREV+KVITMQ+ FSQV+HTAK +E ESGGI
Sbjct: 619  IGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAKLLETESGGI 678

Query: 594  LVDVVKLKEGHAIIVYRGKNYKRPKSAAVNLLNKKEALSRSLEIQRLGSLKFFARQREQA 415
            L+ V K+KEGHAII+YRGKNY+RP+    NLLNK++AL RSLE+QRLGSLKF+A Q EQA
Sbjct: 679  LISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQRLGSLKFYANQTEQA 738

Query: 414  ILDLKQKL 391
            I DLK KL
Sbjct: 739  ISDLKLKL 746


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  736 bits (1899), Expect = 0.0
 Identities = 404/744 (54%), Positives = 512/744 (68%), Gaps = 13/744 (1%)
 Frame = -2

Query: 2568 SIPHSRSK--LKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGG 2395
            S+P+S+S   +K PTAPWM  PL ++P+E+ ++ + +NK    +   E  D+ LTGK  G
Sbjct: 48   SVPNSQSNAPIKVPTAPWMKGPLLLQPHELINLSKPRNKNSSNNANIEKSDKVLTGKESG 107

Query: 2394 ARGRLAMKKIFKSFEKLQETHDLE-------AFSKNR-ESRKFKFAP--GALCGNGDYGG 2245
             RG+ AM+KI KS E+LQE   LE       A+ K + +S  F+     G +  +GD+G 
Sbjct: 108  VRGKKAMEKIVKSIEQLQENQALEKTQCDSQAYEKTQLDSEAFEIGEKLGLIREHGDFG- 166

Query: 2244 DXXXXXXECSKAAEENLNGNEFDIPLFNAGKEVKSKKLPWEKEEKMVIRMAKKEKVLTAA 2065
                                            V  K  PWE+EEK V    KKEK +T A
Sbjct: 167  --------------------------------VNKKLKPWEREEKFVYWRIKKEKAVTKA 194

Query: 2064 ESSLDEILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNM 1885
            E  L++ LLE LR EA+ M+KWVKVMKAGVTQ+VVDQ+ + WRN+ELA+VKFDLPL RNM
Sbjct: 195  ELILEKELLEILRTEASKMRKWVKVMKAGVTQSVVDQIRYAWRNNELAMVKFDLPLCRNM 254

Query: 1884 GRAREIVELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARDQGNSSSNITYQN 1705
             RAREIVELKTGGLVVW +KD L +YRGCNY                     SS+++  +
Sbjct: 255  DRAREIVELKTGGLVVWTRKDSLVIYRGCNYHL-----------------TKSSHVSTMD 297

Query: 1704 TRTVALETSGESNPHELIHGRDGKLENSEMASLYEREADRLLDELGPRFVDWWMQKPLPV 1525
             +  + +   E  P  +  G D         SL+ERE DRLLD LGPRFVDWWM+KPLPV
Sbjct: 298  EKIGSKDGEEEYIPTSIFIGDDANTPTIN-GSLFERETDRLLDGLGPRFVDWWMRKPLPV 356

Query: 1524 DGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAA 1345
            D DLLP VV GF  P R    + RAKL DDELTYLR+LA  LPTHFVLGRNR LQGLAAA
Sbjct: 357  DADLLPEVVAGFMPPSRF--HYARAKLKDDELTYLRKLAYALPTHFVLGRNRRLQGLAAA 414

Query: 1344 ILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPSEV 1165
            ILKLWE+  IAKIAVKWG+PNTDNEQMANELK LTGGVLLLRNKF IIL+RGKDFLP +V
Sbjct: 415  ILKLWERSLIAKIAVKWGIPNTDNEQMANELKHLTGGVLLLRNKFFIILFRGKDFLPCQV 474

Query: 1164 AKVVAERETELTQCQLREEAARLKASESFSITHDHLI-SSDITGTLSEFHRMRSEIGSLK 988
            A +V +RE EL  CQL EE ARLKA E+ S T D L+  +   GTL+EF  ++     L 
Sbjct: 475  ADLVVKRENELKICQLNEEGARLKAIET-SFTDDELVVKATKIGTLNEFQDIQVRFKELA 533

Query: 987  KGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAEEEPDLEI 808
            KG  +  ++LEAE+++LE+EL+ QEHKL ILK KIEKS++ L KL +    A+++ DLE+
Sbjct: 534  KGYRDSKLQLEAEKEKLERELRIQEHKLLILKSKIEKSARELSKLNSAWAPADQDADLEM 593

Query: 807  LSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRTFSQVMHT 628
            ++ EER CLR++GL+++SSL+LGRRG++DGVIEG+HQHWKHREVVKVI++QR F+QV+ T
Sbjct: 594  MTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVIRT 653

Query: 627  AKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRPKSAAVNLLNKKEALSRSLEIQRLGS 448
            AK++EAE+GGILV + KLKEGHAII+YRGKNY+RP+    NLL K++AL RSLE+QR+GS
Sbjct: 654  AKFLEAETGGILVSIDKLKEGHAIIIYRGKNYRRPQRLLNNLLTKRKALCRSLEMQRIGS 713

Query: 447  LKFFARQREQAILDLKQKLDELSE 376
            L+FFA QR+ +I +LK +L +L E
Sbjct: 714  LRFFAYQRQHSIRELKFQLAQLQE 737


>ref|XP_007033218.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
            cacao] gi|508712247|gb|EOY04144.1| maize chloroplast
            splicing factor CRS1, putative isoform 2 [Theobroma
            cacao]
          Length = 804

 Score =  726 bits (1874), Expect = 0.0
 Identities = 397/767 (51%), Positives = 516/767 (67%), Gaps = 22/767 (2%)
 Frame = -2

Query: 2607 ERGSEDSSAQSSKSIPHSRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEH 2428
            E  S +++++ S S   +   +K PTAPWM  PL ++P+E+ +  +  +K     +  + 
Sbjct: 67   ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSK-AKA 125

Query: 2427 PDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYG 2248
            PD+ L GK  G RG+  MKKI ++ E LQ    LE                         
Sbjct: 126  PDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIG-------------------- 165

Query: 2247 GDXXXXXXECSKAAEENLNGNEFDIPLFNAGKEVK--SKKLPW-EKEEKMVIRMAKKEKV 2077
                          EE   GN  +   F +  EVK    K+PW  +EEK+V R  KKEK+
Sbjct: 166  ------------IREEFEVGNWLEE--FGSDGEVKRFDGKMPWLREEEKVVFRRMKKEKL 211

Query: 2076 LTAAESSLDEILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPL 1897
            LT AE SLD+ LLERLR +A  M+KW+KVMK GVT+AVVD++   WR +EL +VKF +PL
Sbjct: 212  LTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPL 271

Query: 1896 SRNMGRAREIVELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARD----QGNS 1729
             RNM RAREI+E+KT GLVVWGKKD L VYRGC++G  S+ + +M Y    D      ++
Sbjct: 272  CRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK-ISSMKYPRCADGQEISSST 330

Query: 1728 SSNITYQNTRTVALETSGESNPHELIHGRDGKLENSEM--------------ASLYEREA 1591
             S++T  N   ++LE    S     ++  D + E+  +               SLYERE 
Sbjct: 331  FSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERET 390

Query: 1590 DRLLDELGPRFVDWWMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRL 1411
            DRLLD LGPRF+DWWM+KPLP+D DLLP  VPGF+ P RL PP  R  L DDEL YLR+L
Sbjct: 391  DRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKL 450

Query: 1410 ARPLPTHFVLGRNRNLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGV 1231
              PLP HF LG+NRNLQGLAAAILKLWEK  IAKIA+KWG+ NTDNEQMA ELK LTGGV
Sbjct: 451  THPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGV 510

Query: 1230 LLLRNKFLIILYRGKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLIS 1051
            LL+RNKFL+ILYRGKDFLP  VA +V ERE  L +CQL EE AR+K +E+  +  + L  
Sbjct: 511  LLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAK 570

Query: 1050 SDITGTLSEFHRMRSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSS 871
            +   GTLSEF  +++  G LKK  +E++++LEA+++ LE+EL++QE KL IL  KIEKS+
Sbjct: 571  TSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSA 630

Query: 870  KVLDKLKNESRLAEEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHW 691
            K L KLK+  + AE++ DLEI++ EER CLR++GL++ S LVLGRRG+++GVIEG++QHW
Sbjct: 631  KELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHW 690

Query: 690  KHREVVKVITMQRTFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSA 514
            KHREVVKVITMQR F++V++TAK++ AE+GGILV V KLKEGHA+I+YRGKNY+RP K  
Sbjct: 691  KHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLM 750

Query: 513  AVNLLNKKEALSRSLEIQRLGSLKFFARQREQAILDLKQKLDELSEK 373
              NLL K+EAL +S+E+QR+GSLKFFA QR QAILDLK KL EL ++
Sbjct: 751  TNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLKLAELKDR 797


>ref|XP_007033217.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
            cacao] gi|508712246|gb|EOY04143.1| maize chloroplast
            splicing factor CRS1, putative isoform 1 [Theobroma
            cacao]
          Length = 818

 Score =  726 bits (1874), Expect = 0.0
 Identities = 397/767 (51%), Positives = 516/767 (67%), Gaps = 22/767 (2%)
 Frame = -2

Query: 2607 ERGSEDSSAQSSKSIPHSRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEH 2428
            E  S +++++ S S   +   +K PTAPWM  PL ++P+E+ +  +  +K     +  + 
Sbjct: 67   ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSK-AKA 125

Query: 2427 PDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYG 2248
            PD+ L GK  G RG+  MKKI ++ E LQ    LE                         
Sbjct: 126  PDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIG-------------------- 165

Query: 2247 GDXXXXXXECSKAAEENLNGNEFDIPLFNAGKEVK--SKKLPW-EKEEKMVIRMAKKEKV 2077
                          EE   GN  +   F +  EVK    K+PW  +EEK+V R  KKEK+
Sbjct: 166  ------------IREEFEVGNWLEE--FGSDGEVKRFDGKMPWLREEEKVVFRRMKKEKL 211

Query: 2076 LTAAESSLDEILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPL 1897
            LT AE SLD+ LLERLR +A  M+KW+KVMK GVT+AVVD++   WR +EL +VKF +PL
Sbjct: 212  LTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPL 271

Query: 1896 SRNMGRAREIVELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARD----QGNS 1729
             RNM RAREI+E+KT GLVVWGKKD L VYRGC++G  S+ + +M Y    D      ++
Sbjct: 272  CRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK-ISSMKYPRCADGQEISSST 330

Query: 1728 SSNITYQNTRTVALETSGESNPHELIHGRDGKLENSEM--------------ASLYEREA 1591
             S++T  N   ++LE    S     ++  D + E+  +               SLYERE 
Sbjct: 331  FSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERET 390

Query: 1590 DRLLDELGPRFVDWWMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRL 1411
            DRLLD LGPRF+DWWM+KPLP+D DLLP  VPGF+ P RL PP  R  L DDEL YLR+L
Sbjct: 391  DRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKL 450

Query: 1410 ARPLPTHFVLGRNRNLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGV 1231
              PLP HF LG+NRNLQGLAAAILKLWEK  IAKIA+KWG+ NTDNEQMA ELK LTGGV
Sbjct: 451  THPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGV 510

Query: 1230 LLLRNKFLIILYRGKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLIS 1051
            LL+RNKFL+ILYRGKDFLP  VA +V ERE  L +CQL EE AR+K +E+  +  + L  
Sbjct: 511  LLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAK 570

Query: 1050 SDITGTLSEFHRMRSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSS 871
            +   GTLSEF  +++  G LKK  +E++++LEA+++ LE+EL++QE KL IL  KIEKS+
Sbjct: 571  TSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSA 630

Query: 870  KVLDKLKNESRLAEEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHW 691
            K L KLK+  + AE++ DLEI++ EER CLR++GL++ S LVLGRRG+++GVIEG++QHW
Sbjct: 631  KELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHW 690

Query: 690  KHREVVKVITMQRTFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSA 514
            KHREVVKVITMQR F++V++TAK++ AE+GGILV V KLKEGHA+I+YRGKNY+RP K  
Sbjct: 691  KHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLM 750

Query: 513  AVNLLNKKEALSRSLEIQRLGSLKFFARQREQAILDLKQKLDELSEK 373
              NLL K+EAL +S+E+QR+GSLKFFA QR QAILDLK KL EL ++
Sbjct: 751  TNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLKLAELKDR 797


>ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
            gi|462413463|gb|EMJ18512.1| hypothetical protein
            PRUPE_ppa016241mg [Prunus persica]
          Length = 809

 Score =  726 bits (1873), Expect = 0.0
 Identities = 409/748 (54%), Positives = 517/748 (69%), Gaps = 30/748 (4%)
 Frame = -2

Query: 2544 LKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKI 2365
            +KAPTAPWM  PL ++P+E+    + +NK    +   E PD  L GK+ G RG  A+K+I
Sbjct: 85   IKAPTAPWMKGPLLLQPHEVIDFSKPRNKKTHNNAKAEKPDTVLAGKLVGIRGDKAIKQI 144

Query: 2364 FKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYG-GDXXXXXXECSKAAEENLNG 2188
             +S E+L          K  E++K         G G++   D      +  K  E + + 
Sbjct: 145  VQSIERLGPNQ------KTDETQK---------GFGEFRIWDSLEGLGQNEKWDETHKDF 189

Query: 2187 NEFDIP--LFNAGKEVKSK---KLPWEKEEKMVIRMAKKEKVLTAAESSLDEILLERLRN 2023
             EF I   L   GK   S+   K+PWE++E++V +  KK++V +AAE SL++ LLERLR 
Sbjct: 190  VEFGIGGCLEGLGKAADSRFGGKMPWERDERIVFQRIKKKRVASAAELSLEKELLERLRA 249

Query: 2022 EAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREIVELKTGGL 1843
            EAA M+KWVKV KAGVTQA+VD + F W+ +ELA+VKFD+PL RNM RA+EIVE KTGG+
Sbjct: 250  EAAKMRKWVKVKKAGVTQAIVDDIKFIWKTNELAMVKFDVPLCRNMHRAQEIVETKTGGM 309

Query: 1842 VVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARDQGNSSS---------NITYQNTRTVA 1690
            VVWGKKD L +YRGCNY S S+    M   SA  Q   SS         N +YQ      
Sbjct: 310  VVWGKKDTLVIYRGCNYQSSSKFFPKMRPCSADRQETLSSDHMQPDLEENSSYQYK---- 365

Query: 1689 LETSGESNPHELIHGRD--------GKLENSEMA------SLYEREADRLLDELGPRFVD 1552
               S ES   E +  +D        G  + + M+      SLYE+EADRLLD LGPRF+D
Sbjct: 366  ---SFESPVDEKMSRKDAEEDCIQSGTFQETSMSCQPTSRSLYEKEADRLLDGLGPRFID 422

Query: 1551 WWMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRN 1372
            WWM KPLPVD DLLP VVPGFK P R CPP  R+KL DDELT+LR+ AR LPTHFVLGRN
Sbjct: 423  WWMHKPLPVDADLLPEVVPGFKAPIRRCPPHTRSKLTDDELTFLRKFARSLPTHFVLGRN 482

Query: 1371 RNLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYR 1192
            R LQGLAAAILKLWEK  IAKIAVK+GVPNT+NEQMA EL+     VL+LRNKF+I+LYR
Sbjct: 483  RKLQGLAAAILKLWEKSLIAKIAVKFGVPNTNNEQMAYELR---ARVLILRNKFIILLYR 539

Query: 1191 GKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFHRM 1012
            GKDFLP  VA +VA+RE ELT+ QL EE AR KA E+F  + + L+++   GTLSEF  +
Sbjct: 540  GKDFLPCGVADLVAKREVELTRWQLYEEHARQKAIETFCESGEPLVNT--VGTLSEFQDI 597

Query: 1011 RSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLA 832
            ++E G L K    V+++LEAE+++LE+EL++QE K FIL KKIEKS+  L KL ++   A
Sbjct: 598  QTEYGELIKENKNVEIKLEAEKEQLERELRNQERKFFILNKKIEKSTNELSKLNSQRTPA 657

Query: 831  EEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQR 652
            E++ D E+++ EE+ CLR +GL++ S LVLGRRG+++GV+EG+HQHWKHREVVKVITMQ+
Sbjct: 658  EQDVDQEMMTEEEKECLRTVGLKMHSCLVLGRRGVFNGVMEGLHQHWKHREVVKVITMQK 717

Query: 651  TFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSAAVNLLNKKEALSR 475
             F QVMHTAK +EAESGGILV V KLKEGHAII+YRGKNY+RP      NLL+K++AL R
Sbjct: 718  LFRQVMHTAKLLEAESGGILVSVDKLKEGHAIIIYRGKNYRRPLMPTGGNLLSKRKALHR 777

Query: 474  SLEIQRLGSLKFFARQREQAILDLKQKL 391
            SLE+QR+GSLKFFA QR+QA LDLK KL
Sbjct: 778  SLEMQRIGSLKFFASQRQQATLDLKLKL 805


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857343|ref|XP_006482226.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score =  724 bits (1870), Expect = 0.0
 Identities = 401/751 (53%), Positives = 511/751 (68%), Gaps = 19/751 (2%)
 Frame = -2

Query: 2541 KAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIF 2362
            K PTAPWM  P+ ++P+E+    + K K     +  +  D+ LT K  G RG+ AMKKI 
Sbjct: 54   KMPTAPWMRSPIVLQPDEIIKPSKPKTK-----KSFKKTDKGLTAKESGVRGKQAMKKII 108

Query: 2361 KSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYGGDXXXXXXECSKAAEENLNGNE 2182
            ++ EKLQ+   L+   K +   KF+F  G    N  +               EE+L G  
Sbjct: 109  ENIEKLQKDQILDETQK-KVMEKFEF-KGCFEENVSH---------------EEDLRGG- 150

Query: 2181 FDIPLFNAGKEVKSKKLPWEKEEKMVIRMAKKEKVLTAAESSLDEILLERLRNEAALMKK 2002
                           K+PW +E++ V R  KKE+++T AE+ LD  LLERL++EA  M+K
Sbjct: 151  ------------FGGKVPWLREDRFVFRRMKKERMVTKAETMLDGELLERLKDEARKMRK 198

Query: 2001 WVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREIVELKTGGLVVWGKKD 1822
            WVKV KAGVT++VV ++   WR +ELA+VKFD+PL RNM RAREI+ELKTGGLV+W KKD
Sbjct: 199  WVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKD 258

Query: 1821 LLAVYRGCNYGSGSENLRNMNYSSARDQGNSSS-----------NITYQNTRTVALETS- 1678
               VYR    G  S++   M   SA DQ    S           N+++  + T  L+ + 
Sbjct: 259  AHVVYR----GDSSKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNR 314

Query: 1677 ----GESN--PHELIHGRDGKLENSEMASLYEREADRLLDELGPRFVDWWMQKPLPVDGD 1516
                GE N  P  +   ++ +++     SLYERE DRLLD LGPRFVDWWM KPLPVDGD
Sbjct: 315  SLKDGEENSLPTSIFMDKNLRIDK----SLYEREGDRLLDGLGPRFVDWWMWKPLPVDGD 370

Query: 1515 LLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAAILK 1336
            LLP VVPGFK PFRL PP  R+KL DDELTYLR+LA PLPTHFVLGRNR LQGLA AILK
Sbjct: 371  LLPEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILK 430

Query: 1335 LWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPSEVAKV 1156
            LWEK  +AKI VKWG+PNTDNEQMANELK LTGGVLLLRNKFLIILYRG DFLP  V  +
Sbjct: 431  LWEKSLVAKITVKWGIPNTDNEQMANELKHLTGGVLLLRNKFLIILYRGNDFLPCGVENL 490

Query: 1155 VAERETELTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFHRMRSEIGSLKKGKT 976
            + ERE EL  CQ  EE ARLKA E+F + H+ L  +   GTLSEF  ++S+ G LK G  
Sbjct: 491  IVERERELQICQNHEEGARLKAIETFHLPHEPLEKTSKAGTLSEFQNIQSDFGDLKMGNR 550

Query: 975  EVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAEEEPDLEILSNE 796
            E +++LEAE + LE+EL+ QE KLFIL  KIEKS+K L +L +  +  E++PDLE+++ E
Sbjct: 551  EFELQLEAEIEDLERELRKQERKLFILNIKIEKSAKELSRLNSAWKPREQDPDLEMITEE 610

Query: 795  ERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRTFSQVMHTAKYV 616
            ER CL ++G+++ S+L+LGRRG++DGVIEG+HQHWK+REV +VIT Q+ F+QV++TAK +
Sbjct: 611  ERQCLHKIGMKMNSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQVIYTAKSL 670

Query: 615  EAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSAAVNLLNKKEALSRSLEIQRLGSLKF 439
             AESGGIL+ V KLKEGHAII+YRGKNY+RP K    NLL+K++AL RSLE+QRLGSLKF
Sbjct: 671  VAESGGILISVDKLKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALRRSLEMQRLGSLKF 730

Query: 438  FARQREQAILDLKQKLDELSEKMC*FLKLIS 346
            FA QR++ I +LK KL EL E     +K+I+
Sbjct: 731  FAYQRQRVISNLKIKLAELQESRQKNMKIIA 761


>ref|XP_007033219.1| maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
            cacao] gi|508712248|gb|EOY04145.1| maize chloroplast
            splicing factor CRS1, putative isoform 3 [Theobroma
            cacao]
          Length = 788

 Score =  723 bits (1866), Expect = 0.0
 Identities = 396/765 (51%), Positives = 514/765 (67%), Gaps = 22/765 (2%)
 Frame = -2

Query: 2607 ERGSEDSSAQSSKSIPHSRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEH 2428
            E  S +++++ S S   +   +K PTAPWM  PL ++P+E+ +  +  +K     +  + 
Sbjct: 41   ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSK-AKA 99

Query: 2427 PDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYG 2248
            PD+ L GK  G RG+  MKKI ++ E LQ    LE                         
Sbjct: 100  PDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIG-------------------- 139

Query: 2247 GDXXXXXXECSKAAEENLNGNEFDIPLFNAGKEVK--SKKLPW-EKEEKMVIRMAKKEKV 2077
                          EE   GN  +   F +  EVK    K+PW  +EEK+V R  KKEK+
Sbjct: 140  ------------IREEFEVGNWLEE--FGSDGEVKRFDGKMPWLREEEKVVFRRMKKEKL 185

Query: 2076 LTAAESSLDEILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPL 1897
            LT AE SLD+ LLERLR +A  M+KW+KVMK GVT+AVVD++   WR +EL +VKF +PL
Sbjct: 186  LTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPL 245

Query: 1896 SRNMGRAREIVELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARD----QGNS 1729
             RNM RAREI+E+KT GLVVWGKKD L VYRGC++G  S+ + +M Y    D      ++
Sbjct: 246  CRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK-ISSMKYPRCADGQEISSST 304

Query: 1728 SSNITYQNTRTVALETSGESNPHELIHGRDGKLENSEM--------------ASLYEREA 1591
             S++T  N   ++LE    S     ++  D + E+  +               SLYERE 
Sbjct: 305  FSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERET 364

Query: 1590 DRLLDELGPRFVDWWMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRL 1411
            DRLLD LGPRF+DWWM+KPLP+D DLLP  VPGF+ P RL PP  R  L DDEL YLR+L
Sbjct: 365  DRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKL 424

Query: 1410 ARPLPTHFVLGRNRNLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGV 1231
              PLP HF LG+NRNLQGLAAAILKLWEK  IAKIA+KWG+ NTDNEQMA ELK LTGGV
Sbjct: 425  THPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGV 484

Query: 1230 LLLRNKFLIILYRGKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLIS 1051
            LL+RNKFL+ILYRGKDFLP  VA +V ERE  L +CQL EE AR+K +E+  +  + L  
Sbjct: 485  LLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAK 544

Query: 1050 SDITGTLSEFHRMRSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSS 871
            +   GTLSEF  +++  G LKK  +E++++LEA+++ LE+EL++QE KL IL  KIEKS+
Sbjct: 545  TSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSA 604

Query: 870  KVLDKLKNESRLAEEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHW 691
            K L KLK+  + AE++ DLEI++ EER CLR++GL++ S LVLGRRG+++GVIEG++QHW
Sbjct: 605  KELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHW 664

Query: 690  KHREVVKVITMQRTFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSA 514
            KHREVVKVITMQR F++V++TAK++ AE+GGILV V KLKEGHA+I+YRGKNY+RP K  
Sbjct: 665  KHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLM 724

Query: 513  AVNLLNKKEALSRSLEIQRLGSLKFFARQREQAILDLKQKLDELS 379
              NLL K+EAL +S+E+QR+GSLKFFA QR QAILDLK KL  +S
Sbjct: 725  TNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLKLVRIS 769


>ref|XP_007033220.1| maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
            cacao] gi|508712249|gb|EOY04146.1| maize chloroplast
            splicing factor CRS1, putative isoform 4 [Theobroma
            cacao]
          Length = 767

 Score =  722 bits (1863), Expect = 0.0
 Identities = 395/761 (51%), Positives = 512/761 (67%), Gaps = 22/761 (2%)
 Frame = -2

Query: 2607 ERGSEDSSAQSSKSIPHSRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEH 2428
            E  S +++++ S S   +   +K PTAPWM  PL ++P+E+ +  +  +K     +  + 
Sbjct: 41   ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSK-AKA 99

Query: 2427 PDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYG 2248
            PD+ L GK  G RG+  MKKI ++ E LQ    LE                         
Sbjct: 100  PDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIG-------------------- 139

Query: 2247 GDXXXXXXECSKAAEENLNGNEFDIPLFNAGKEVK--SKKLPW-EKEEKMVIRMAKKEKV 2077
                          EE   GN  +   F +  EVK    K+PW  +EEK+V R  KKEK+
Sbjct: 140  ------------IREEFEVGNWLEE--FGSDGEVKRFDGKMPWLREEEKVVFRRMKKEKL 185

Query: 2076 LTAAESSLDEILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPL 1897
            LT AE SLD+ LLERLR +A  M+KW+KVMK GVT+AVVD++   WR +EL +VKF +PL
Sbjct: 186  LTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPL 245

Query: 1896 SRNMGRAREIVELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARD----QGNS 1729
             RNM RAREI+E+KT GLVVWGKKD L VYRGC++G  S+ + +M Y    D      ++
Sbjct: 246  CRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK-ISSMKYPRCADGQEISSST 304

Query: 1728 SSNITYQNTRTVALETSGESNPHELIHGRDGKLENSEM--------------ASLYEREA 1591
             S++T  N   ++LE    S     ++  D + E+  +               SLYERE 
Sbjct: 305  FSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERET 364

Query: 1590 DRLLDELGPRFVDWWMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRL 1411
            DRLLD LGPRF+DWWM+KPLP+D DLLP  VPGF+ P RL PP  R  L DDEL YLR+L
Sbjct: 365  DRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKL 424

Query: 1410 ARPLPTHFVLGRNRNLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGV 1231
              PLP HF LG+NRNLQGLAAAILKLWEK  IAKIA+KWG+ NTDNEQMA ELK LTGGV
Sbjct: 425  THPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGV 484

Query: 1230 LLLRNKFLIILYRGKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLIS 1051
            LL+RNKFL+ILYRGKDFLP  VA +V ERE  L +CQL EE AR+K +E+  +  + L  
Sbjct: 485  LLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAK 544

Query: 1050 SDITGTLSEFHRMRSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSS 871
            +   GTLSEF  +++  G LKK  +E++++LEA+++ LE+EL++QE KL IL  KIEKS+
Sbjct: 545  TSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSA 604

Query: 870  KVLDKLKNESRLAEEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHW 691
            K L KLK+  + AE++ DLEI++ EER CLR++GL++ S LVLGRRG+++GVIEG++QHW
Sbjct: 605  KELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHW 664

Query: 690  KHREVVKVITMQRTFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSA 514
            KHREVVKVITMQR F++V++TAK++ AE+GGILV V KLKEGHA+I+YRGKNY+RP K  
Sbjct: 665  KHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLM 724

Query: 513  AVNLLNKKEALSRSLEIQRLGSLKFFARQREQAILDLKQKL 391
              NLL K+EAL +S+E+QR+GSLKFFA QR QAILDLK KL
Sbjct: 725  TNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLKL 765


>gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 828

 Score =  721 bits (1860), Expect = 0.0
 Identities = 399/755 (52%), Positives = 506/755 (67%), Gaps = 25/755 (3%)
 Frame = -2

Query: 2577 SSKSIPHSRSKL---KAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTG 2407
            S+K  P S+  L   K PT PWM  PL ++P+E+  + + +N     +R  E     LT 
Sbjct: 48   STKENPDSKPPLEPIKMPTPPWMKGPLVLQPHEVTDLSKPENDNKFSNRKAEKSVNGLTD 107

Query: 2406 KVGGARGRLAMKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYGGDXXXXX 2227
            K+ G RG+  +KKI +  E+L     +++    ++            G    G       
Sbjct: 108  KLVGRRGKNVIKKIARRIEELGRKSKVDSEETQKD----------FVGKNGIGD------ 151

Query: 2226 XECSKAAEENLNGNEFDIPLFNAGKEVKSKKLPWEKEEKMVIRMAKKEKVLTAAESSLDE 2047
              C +   E+ +G E               ++PWEK+E  V R  KKEK++++AE  L+ 
Sbjct: 152  --CLEGLGESRSGGE---------------RMPWEKDEGFVFRRMKKEKIVSSAELRLER 194

Query: 2046 ILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREI 1867
             LLERLR+EA  M+KWVKV KAGVT+ VV+ V F W+++ELA+VKFD+PL RNM RA+EI
Sbjct: 195  ELLERLRSEARKMRKWVKVKKAGVTKEVVEDVKFVWKSNELAMVKFDVPLCRNMDRAQEI 254

Query: 1866 VELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNM--NYSSARD------------QGNS 1729
            +E+KTGGLVVW +KD   +YRGCNY   S+        +S  ++            +GNS
Sbjct: 255  LEMKTGGLVVWRRKDAQVIYRGCNYQPTSKTFPRTYAGFSGHQETPFSNLVQLDSRKGNS 314

Query: 1728 SSNI-TYQNT---RTVALETSGESNPHELIHGRDGKLENSEMASLYEREADRLLDELGPR 1561
             S + +Y+NT   +     T GE+ P  +I   D   + S  +SLY READRLLD LGPR
Sbjct: 315  VSEVKSYENTIERKISKKNTEGETIPTAIILKNDANFQPS--SSLYVREADRLLDGLGPR 372

Query: 1560 FVDWWMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVL 1381
            F+DWWM KPLPVD DLLP VVPGF+ PFR CPP  R+KL D+ELTYLR+LA  LPTHFVL
Sbjct: 373  FIDWWMNKPLPVDADLLPEVVPGFRPPFRRCPPHTRSKLTDEELTYLRKLAHSLPTHFVL 432

Query: 1380 GRNRNLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKR---LTGGVLLLRNKF 1210
            GRNR LQGLAAAILKLWEKCHIAKIAVK GVPNT+NEQMA ELK    LTGG LLLRNKF
Sbjct: 433  GRNRKLQGLAAAILKLWEKCHIAKIAVKLGVPNTNNEQMAYELKARICLTGGDLLLRNKF 492

Query: 1209 LIILYRGKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLISSDITGTL 1030
            +IILYRGKDFLP ++A+++ +RETEL  CQL EE ARL  +E   +  + L  +   GTL
Sbjct: 493  IIILYRGKDFLPDQIAELITKRETELEYCQLYEEHARLVVAEKVFVADEPLKKTSPAGTL 552

Query: 1029 SEFHRMRSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLK 850
            SEFH ++ E G   KG  EV +  EAE++RLE EL+ QE KL IL  KI+KS+K L KL 
Sbjct: 553  SEFHDIQIEYGDSNKGNIEVKLPFEAEKERLESELRKQERKLLILNSKIKKSTKELLKLN 612

Query: 849  NESRLAEEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVK 670
               + +E + D E+L+ EER C R++GL+++S LVLGRRGI+DGVIEG+ QHWKHREV K
Sbjct: 613  TAWKPSERDGDQEMLTEEERECFRKIGLKMRSVLVLGRRGIFDGVIEGLRQHWKHREVAK 672

Query: 669  VITMQRTFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSAAVNLLNK 493
            VITMQR F QVM+TA  +EAESGG+LV V KLKEGHAII+YRGKNY+RP K  +VNLL K
Sbjct: 673  VITMQRYFWQVMYTATSLEAESGGLLVSVEKLKEGHAIIIYRGKNYRRPLKLISVNLLTK 732

Query: 492  KEALSRSLEIQRLGSLKFFARQREQAILDLKQKLD 388
            ++ALSRSLE+QR+GSLKFFA QR +AI DLK KL+
Sbjct: 733  RKALSRSLEMQRIGSLKFFAYQRHRAISDLKLKLN 767


>gb|EPS58217.1| hypothetical protein M569_16596, partial [Genlisea aurea]
          Length = 668

 Score =  720 bits (1859), Expect = 0.0
 Identities = 400/735 (54%), Positives = 507/735 (68%), Gaps = 13/735 (1%)
 Frame = -2

Query: 2556 SRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLA 2377
            S   + APTAPWM +PLFV P+++  +++   K    ++  +  D+DL+ KVG  R +LA
Sbjct: 1    SSESVSAPTAPWMRKPLFVNPSQLLDLRKSPIKKNSFNK--QRLDKDLSEKVGNGRNKLA 58

Query: 2376 MKKIFKSFEKLQETHDLEAFSKNRESRK---FKFAPGALCGNGDYGGDXXXXXXECSKAA 2206
            M++IF+  +KLQE+      +    S K   FKF PG L GN     +       C + +
Sbjct: 59   MRQIFRGIKKLQESRPSSEAAATEGSPKNFEFKFRPGELSGNPQDSKNDG-----CERNS 113

Query: 2205 EENLNGNEFDIPLFNA--GKEVKSKKLPWEKEEKMVIRMAKKEKVLTAAE-SSLDEILLE 2035
            E     + F IPL  A  G+EV+ K +PW++E   V RMA    ++ AA+ +++DE+LLE
Sbjct: 114  ETT---DGFCIPLREAAEGEEVRLKAMPWQREA--VGRMATNRPLMKAAKLNAIDELLLE 168

Query: 2034 RLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRND--ELALVKFDLPLSRNMGRAREIVE 1861
            RL+NEAA M+KW+KV K GVT  VVDQVH TWR+   +LAL+KFD+PL+R M RAREIVE
Sbjct: 169  RLQNEAAKMRKWIKVKKLGVTPTVVDQVHSTWRSSRSQLALLKFDVPLNRCMSRAREIVE 228

Query: 1860 LKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARDQGNSSSNITYQNTRTVALET 1681
            +KTGG+ +W  KDL+AVYRG                      + SSN             
Sbjct: 229  MKTGGIAIWKSKDLIAVYRG----------------------SESSN------------- 253

Query: 1680 SGESNPHELIHGRDGKLENSEMASLYEREADRLLDELGPRFVDWWMQKPLPVDGDLLPAV 1501
                           +  ++  +SLYERE DRLLDELGPRFVDWW+ KPLPVD DLLP V
Sbjct: 254  --------------AQQSSASFSSLYERETDRLLDELGPRFVDWWLHKPLPVDADLLPQV 299

Query: 1500 VPGFKTPFRLCPP-FNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAAILKLWEK 1324
            VPGFK P RLCPP F R +L DDELTYLR+LARPLPTHFVLGRN  LQGLAAAILKLWEK
Sbjct: 300  VPGFKPPPRLCPPPFTRPQLFDDELTYLRKLARPLPTHFVLGRNNKLQGLAAAILKLWEK 359

Query: 1323 CHIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVAER 1144
            CHIAKIA+KWGV NTDNE MA+ELKRLTGGVL+LRNK+LI+LYRGKDFLP +VAK VAER
Sbjct: 360  CHIAKIALKWGVQNTDNELMADELKRLTGGVLILRNKYLILLYRGKDFLPRKVAKAVAER 419

Query: 1143 ETELTQCQLREEAARLKASESFSITH----DHLISSDITGTLSEFHRMRSEIGSLKKGKT 976
               L+  Q  EEAAR+KASE F I      D   +S   GTL+EFH + +E  S+     
Sbjct: 420  NILLSTSQQLEEAARIKASEPFLIAEEEEEDSCSASLGGGTLAEFHDICTERSSMTM--- 476

Query: 975  EVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAEEEPDLEILSNE 796
                E E +++RLEKEL++Q+  L  LK+KIE+SS+VL K+K+E+  +E +PD+E+LSNE
Sbjct: 477  ---TEAELKKERLEKELENQQKSLSNLKRKIERSSRVLKKIKSEATYSEPDPDVEVLSNE 533

Query: 795  ERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRTFSQVMHTAKYV 616
            E   LR +G+R  ++L+LGRRG+YDGVIEGMHQHWKHRE+VKV+TMQR +SQ+M TAK +
Sbjct: 534  ELRSLRNLGMRNDNTLLLGRRGVYDGVIEGMHQHWKHREIVKVVTMQRKYSQIMLTAKTL 593

Query: 615  EAESGGILVDVVKLKEGHAIIVYRGKNYKRPKSAAVNLLNKKEALSRSLEIQRLGSLKFF 436
            EAESGGI++ V+KLK+GHAI+VYRGKNY RPK  A+NLLNKK+ALS S+E QRLGSLKFF
Sbjct: 594  EAESGGIVISVLKLKKGHAILVYRGKNYSRPKCVALNLLNKKDALSHSIERQRLGSLKFF 653

Query: 435  ARQREQAILDLKQKL 391
            + QRE  I  LK++L
Sbjct: 654  SLQRETTINRLKRQL 668


>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Glycine max]
            gi|571550194|ref|XP_006603056.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Glycine max]
            gi|571550197|ref|XP_006603057.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Glycine max]
          Length = 747

 Score =  709 bits (1831), Expect = 0.0
 Identities = 388/737 (52%), Positives = 507/737 (68%), Gaps = 9/737 (1%)
 Frame = -2

Query: 2556 SRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLA 2377
            S+  +K+PT PWM  PL ++P+E+  +   K+K  + ++  E  D+ L GK    RG+ A
Sbjct: 40   SQVPIKSPTPPWMKVPLLLQPHELVDLSNPKSKKFKPEK-HELSDKALMGKE--VRGKRA 96

Query: 2376 MKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYGGDXXXXXXECSKAAEEN 2197
            MKKI    EKL +T +      + E+R                               ++
Sbjct: 97   MKKIVDRVEKLHKTQN------SNETRV------------------------------DS 120

Query: 2196 LNGNEFD--IPLFNAGKEVKSK-KLPWEKEEKMVIRMAKKEKVLTAAESSLDEILLERLR 2026
            LN   F   + +    +EV+SK ++PWEK+EK      K+EK +TAAE +LD+ LL RLR
Sbjct: 121  LNVENFGGYLEILKENEEVRSKGRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLR 180

Query: 2025 NEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREIVELKTGG 1846
            NEAA M+ W+KV KAGVTQ VVDQ+  TWR +ELA++KFD+PL RNM RAREIVE KTGG
Sbjct: 181  NEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGG 240

Query: 1845 LVVWGKKDLLAVYRGCNYG---SGSENLRNMNYSSARDQGNSSSNITYQNTRTVALETSG 1675
            LVV  KKD L VYRGCN+     GS +LR  +Y   R +  +  +I    +   + E   
Sbjct: 241  LVVLSKKDFLVVYRGCNHQLTTKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLN 300

Query: 1674 ESNPHELIHGRDGKLENSEMA--SLYEREADRLLDELGPRFVDWWMQKPLPVDGDLLPAV 1501
             +  H+       +  N ++   SLYERE +RLLD LGPRF+DWWM KPLPVD DLLP  
Sbjct: 301  WNADHKDSISTGIQDVNCQLVNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEE 360

Query: 1500 VPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAAILKLWEKC 1321
            VPGF+ PFRLCPP + AKL D ELTY R+LA+ LPTHFVLGRN+ L+GLA+AILKLWEK 
Sbjct: 361  VPGFQPPFRLCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKS 420

Query: 1320 HIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVAERE 1141
             IAKIA+K+G+PNTDNE MANELK LTGGVLLLRNKF I+LYRG DFLP  VA +V +RE
Sbjct: 421  LIAKIAIKYGIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRE 480

Query: 1140 TELTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFHRMRSEIGSLKKGKTEVDVE 961
             EL   QL EE AR+KA ++FS   +  + +  +GTL+EF ++++++   K    + +++
Sbjct: 481  LELKSRQLHEEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQ 540

Query: 960  LEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAEEEPDLEILSNEERVCL 781
            LEAE  RLEKELK+++ + FIL KKI++S + L KL      +E++ DLEI+++EER C 
Sbjct: 541  LEAEICRLEKELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECF 600

Query: 780  REMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRTFSQVMHTAKYVEAESG 601
            R++GL+++SSL+LGRRGI+DGV+EG+HQHWKHREVVKVITMQ+ FSQV++TAK +E ESG
Sbjct: 601  RKIGLKMQSSLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESG 660

Query: 600  GILVDVVKLKEGHAIIVYRGKNYKRPK-SAAVNLLNKKEALSRSLEIQRLGSLKFFARQR 424
            GILV V KLKEGHAII+YRGKNYKRP    A NLL K+EAL RSLE+QR+GS+KFFA QR
Sbjct: 661  GILVSVDKLKEGHAIIIYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQR 720

Query: 423  EQAILDLKQKLDELSEK 373
            EQAI +L+ KL +L +K
Sbjct: 721  EQAISELEVKLADLQQK 737


>ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phaseolus vulgaris]
            gi|561012308|gb|ESW11169.1| hypothetical protein
            PHAVU_008G007700g [Phaseolus vulgaris]
          Length = 744

 Score =  706 bits (1822), Expect = 0.0
 Identities = 392/753 (52%), Positives = 501/753 (66%), Gaps = 18/753 (2%)
 Frame = -2

Query: 2577 SSKSIPHSRSK-----LKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDL 2413
            SS  +P+S +      +K PT PWM  PL ++PNE+  +   K+K  +L+R  E  D+DL
Sbjct: 24   SSSMLPNSNNTPSQLPIKGPTPPWMKGPLLLQPNELLDLSNPKSKKFKLER-QELSDKDL 82

Query: 2412 TGKVGGARGRLAMKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYGGDXXX 2233
             GK   ARG+  MKKI +  EKL  TH+               + GAL G+ +       
Sbjct: 83   MGKE--ARGKKTMKKIVEKVEKLHGTHN---------------SAGALIGSPNV------ 119

Query: 2232 XXXECSKAAEENLNGNEFDIPLFNAGKEVKSKK--LPWEKEEKMVIRMAKKEKVLTAAES 2059
                      EN+ G    +      +EV+  K  +PWE + K V    K+++ +TAAE 
Sbjct: 120  ----------ENIGGV---LDSLKENEEVRRTKGRMPWENDWKFVYEKIKRKRTVTAAEL 166

Query: 2058 SLDEILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGR 1879
            +LD++L  RLRNEAA M+ W+KV KAGVTQ VVDQ+ +TWR +ELA+VKFD+PL RNM R
Sbjct: 167  TLDKVLFRRLRNEAATMRTWIKVKKAGVTQDVVDQIKWTWRRNELAMVKFDIPLCRNMSR 226

Query: 1878 AREIVELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARDQGNSSSNITYQNTR 1699
            AREIVE KTGGLVV  KKD L VY G     G+  L    Y S R   +  S      T 
Sbjct: 227  AREIVETKTGGLVVLSKKDFLVVYHG-----GNHQLTTTGYPSLRTNHSEMSGAELATTG 281

Query: 1698 TVALETSGESNPHELIHGRDGK--LENSEM--------ASLYEREADRLLDELGPRFVDW 1549
             +    S  S    L    + K  +  SE          SLYERE DRLLD+LGPRF+DW
Sbjct: 282  DICSVDSNHSLSEMLNFIAEDKDSIATSEQNMNFQTANGSLYERETDRLLDDLGPRFIDW 341

Query: 1548 WMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNR 1369
            WM KPLPVD DLLP  VPGF+ P R+CPP + AKL+D ELTY R+LA+ LPTHFVLGRN+
Sbjct: 342  WMAKPLPVDADLLPEDVPGFQPPLRICPPHSCAKLSDYELTYFRKLAQLLPTHFVLGRNK 401

Query: 1368 NLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRG 1189
             L+GLAAAILKLWEK  IAKI++K+G+PNTDNE MANELK LTGGVLLLRNKF IILYRG
Sbjct: 402  RLKGLAAAILKLWEKSLIAKISIKYGIPNTDNEMMANELKYLTGGVLLLRNKFYIILYRG 461

Query: 1188 KDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFHRMR 1009
             DFLP  VA +V  RE EL   +L EE AR+KA E+ S   +    +  +GTL+EF  ++
Sbjct: 462  NDFLPKRVATLVENRELELKSFELHEEVARMKALEALSPIDEVPQDTSTSGTLTEFKEIQ 521

Query: 1008 SEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAE 829
            ++    KKG  E++++LEAE  RLEKELK+++H+  IL KK+EKS K L KL      +E
Sbjct: 522  TKFEDAKKGDIELNLQLEAEICRLEKELKEEQHRALILNKKMEKSGKELSKLNAAWTPSE 581

Query: 828  EEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRT 649
            ++ DLE++++EER C R++GL+++S L+LGRRGI+DGV+EG+HQHWKHREVVKVITMQ+ 
Sbjct: 582  QDTDLEMMTDEERECFRKIGLKMQSFLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKL 641

Query: 648  FSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRPK-SAAVNLLNKKEALSRS 472
            FSQV++TAK +E ESGGILV V  LK GHAII+YRGKNY RP    A NLL K++AL RS
Sbjct: 642  FSQVINTAKLLETESGGILVSVDNLKRGHAIIIYRGKNYTRPSVKLAKNLLTKRKALRRS 701

Query: 471  LEIQRLGSLKFFARQREQAILDLKQKLDELSEK 373
            LE+QR GSLKFFARQREQ++ +L+QKL +L ++
Sbjct: 702  LELQRFGSLKFFARQREQSVSELEQKLADLHQR 734


>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Glycine max]
          Length = 744

 Score =  705 bits (1820), Expect = 0.0
 Identities = 386/736 (52%), Positives = 504/736 (68%), Gaps = 9/736 (1%)
 Frame = -2

Query: 2556 SRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLA 2377
            S+  +K+PT PWM  PL ++P+E+  +   K+K  + ++  E  D+ L GK    RG+ A
Sbjct: 40   SQVPIKSPTPPWMKVPLLLQPHELVDLSNPKSKKFKPEK-HELSDKALMGKE--VRGKRA 96

Query: 2376 MKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYGGDXXXXXXECSKAAEEN 2197
            MKKI    EKL +T +      + E+R                               ++
Sbjct: 97   MKKIVDRVEKLHKTQN------SNETRV------------------------------DS 120

Query: 2196 LNGNEFD--IPLFNAGKEVKSK-KLPWEKEEKMVIRMAKKEKVLTAAESSLDEILLERLR 2026
            LN   F   + +    +EV+SK ++PWEK+EK      K+EK +TAAE +LD+ LL RLR
Sbjct: 121  LNVENFGGYLEILKENEEVRSKGRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLR 180

Query: 2025 NEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREIVELKTGG 1846
            NEAA M+ W+KV KAGVTQ VVDQ+  TWR +ELA++KFD+PL RNM RAREIVE KTGG
Sbjct: 181  NEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGG 240

Query: 1845 LVVWGKKDLLAVYRGCNYG---SGSENLRNMNYSSARDQGNSSSNITYQNTRTVALETSG 1675
            LVV  KKD L VYRGCN+     GS +LR  +Y   R +  +  +I    +   + E   
Sbjct: 241  LVVLSKKDFLVVYRGCNHQLTTKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLN 300

Query: 1674 ESNPHELIHGRDGKLENSEMA--SLYEREADRLLDELGPRFVDWWMQKPLPVDGDLLPAV 1501
             +  H+       +  N ++   SLYERE +RLLD LGPRF+DWWM KPLPVD DLLP  
Sbjct: 301  WNADHKDSISTGIQDVNCQLVNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEE 360

Query: 1500 VPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAAILKLWEKC 1321
            VPGF+ PFRLCPP + AKL D ELTY R+LA+ LPTHFVLGRN+ L+GLA+AILKLWEK 
Sbjct: 361  VPGFQPPFRLCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKS 420

Query: 1320 HIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVAERE 1141
             IAKIA+K+G+PNTDNE MANELK LTGGVLLLRNKF I+LYRG DFLP  VA +V +RE
Sbjct: 421  LIAKIAIKYGIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRE 480

Query: 1140 TELTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFHRMRSEIGSLKKGKTEVDVE 961
             EL   QL EE AR+KA ++FS   +  + +  +GTL+EF ++++++   K    + +++
Sbjct: 481  LELKSRQLHEEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQ 540

Query: 960  LEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAEEEPDLEILSNEERVCL 781
            LEAE  RLEKELK+++ + FIL KKI++S + L KL      +E++ DLEI+++EER C 
Sbjct: 541  LEAEICRLEKELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECF 600

Query: 780  REMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRTFSQVMHTAKYVEAESG 601
            R++GL+++SSL+LGRRGI+DGV+EG+HQHWKHREVVKVITMQ+ FSQV++TAK +E ESG
Sbjct: 601  RKIGLKMQSSLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESG 660

Query: 600  GILVDVVKLKEGHAIIVYRGKNYKRPK-SAAVNLLNKKEALSRSLEIQRLGSLKFFARQR 424
            GILV V KLKEGHAII+YRGKNYKRP    A NLL K+EAL RSLE+QR+GS+KFFA QR
Sbjct: 661  GILVSVDKLKEGHAIIIYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQR 720

Query: 423  EQAILDLKQKLDELSE 376
            EQAI +L+  L +  E
Sbjct: 721  EQAISELEADLQQKKE 736


>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 750

 Score =  705 bits (1820), Expect = 0.0
 Identities = 386/731 (52%), Positives = 503/731 (68%), Gaps = 9/731 (1%)
 Frame = -2

Query: 2556 SRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLA 2377
            S+  +K+PT PWM  PL ++P+E+  +   K+K  + ++  E  D+ L GK    RG+ A
Sbjct: 40   SQVPIKSPTPPWMKVPLLLQPHELVDLSNPKSKKFKPEK-HELSDKALMGKE--VRGKRA 96

Query: 2376 MKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYGGDXXXXXXECSKAAEEN 2197
            MKKI    EKL +T +      + E+R                               ++
Sbjct: 97   MKKIVDRVEKLHKTQN------SNETRV------------------------------DS 120

Query: 2196 LNGNEFD--IPLFNAGKEVKSK-KLPWEKEEKMVIRMAKKEKVLTAAESSLDEILLERLR 2026
            LN   F   + +    +EV+SK ++PWEK+EK      K+EK +TAAE +LD+ LL RLR
Sbjct: 121  LNVENFGGYLEILKENEEVRSKGRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLR 180

Query: 2025 NEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREIVELKTGG 1846
            NEAA M+ W+KV KAGVTQ VVDQ+  TWR +ELA++KFD+PL RNM RAREIVE KTGG
Sbjct: 181  NEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGG 240

Query: 1845 LVVWGKKDLLAVYRGCNYG---SGSENLRNMNYSSARDQGNSSSNITYQNTRTVALETSG 1675
            LVV  KKD L VYRGCN+     GS +LR  +Y   R +  +  +I    +   + E   
Sbjct: 241  LVVLSKKDFLVVYRGCNHQLTTKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLN 300

Query: 1674 ESNPHELIHGRDGKLENSEMA--SLYEREADRLLDELGPRFVDWWMQKPLPVDGDLLPAV 1501
             +  H+       +  N ++   SLYERE +RLLD LGPRF+DWWM KPLPVD DLLP  
Sbjct: 301  WNADHKDSISTGIQDVNCQLVNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEE 360

Query: 1500 VPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAAILKLWEKC 1321
            VPGF+ PFRLCPP + AKL D ELTY R+LA+ LPTHFVLGRN+ L+GLA+AILKLWEK 
Sbjct: 361  VPGFQPPFRLCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKS 420

Query: 1320 HIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVAERE 1141
             IAKIA+K+G+PNTDNE MANELK LTGGVLLLRNKF I+LYRG DFLP  VA +V +RE
Sbjct: 421  LIAKIAIKYGIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRE 480

Query: 1140 TELTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFHRMRSEIGSLKKGKTEVDVE 961
             EL   QL EE AR+KA ++FS   +  + +  +GTL+EF ++++++   K    + +++
Sbjct: 481  LELKSRQLHEEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQ 540

Query: 960  LEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAEEEPDLEILSNEERVCL 781
            LEAE  RLEKELK+++ + FIL KKI++S + L KL      +E++ DLEI+++EER C 
Sbjct: 541  LEAEICRLEKELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECF 600

Query: 780  REMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRTFSQVMHTAKYVEAESG 601
            R++GL+++SSL+LGRRGI+DGV+EG+HQHWKHREVVKVITMQ+ FSQV++TAK +E ESG
Sbjct: 601  RKIGLKMQSSLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESG 660

Query: 600  GILVDVVKLKEGHAIIVYRGKNYKRPK-SAAVNLLNKKEALSRSLEIQRLGSLKFFARQR 424
            GILV V KLKEGHAII+YRGKNYKRP    A NLL K+EAL RSLE+QR+GS+KFFA QR
Sbjct: 661  GILVSVDKLKEGHAIIIYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQR 720

Query: 423  EQAILDLKQKL 391
            EQAI +L+ KL
Sbjct: 721  EQAISELEVKL 731


>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
            gi|557532797|gb|ESR43980.1| hypothetical protein
            CICLE_v10013368mg [Citrus clementina]
          Length = 770

 Score =  698 bits (1801), Expect = 0.0
 Identities = 390/743 (52%), Positives = 498/743 (67%), Gaps = 32/743 (4%)
 Frame = -2

Query: 2541 KAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIF 2362
            K PTAPWM  P+ ++P+E+    + K K     +  +  D+ LT K  G RG+ AMKKI 
Sbjct: 60   KMPTAPWMRSPIVLQPDEIIKPSKPKTK-----KSFKKTDKGLTAKESGVRGKQAMKKII 114

Query: 2361 KSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYGGDXXXXXXECSKAAEENLNGNE 2182
            ++ EKLQ+   L+   K ++  KF+F  G    NG               + EE+L G  
Sbjct: 115  ENIEKLQKDQILDETQK-KDMEKFEFR-GCFEENG---------------SDEEDLRGGF 157

Query: 2181 FDIPLFNAGKEVKSKKLPWEKEEKMVIRMAKKEKVLTAAESSLDEILLERLRNEAALMKK 2002
                           K+PW +EE+ V R  KKE+++T AE+ LD  L+ERL++EA  M+K
Sbjct: 158  -------------GGKVPWLREERFVFRRMKKERMVTKAETMLDGELIERLKDEARKMRK 204

Query: 2001 WVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREIVELKTGGLVVWGKKD 1822
            WVKV KAGVT++VV ++   WR +ELA+VKFD+PL RNM RAREI+ELKTGGLV+W KKD
Sbjct: 205  WVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKD 264

Query: 1821 LLAVYRGCNYGSGSENLRNMNYSSARDQGNSSS-----------NITYQNTRTVALETS- 1678
               VYRG     GS++   M   SA DQ    S           N+++  + T  L+ + 
Sbjct: 265  AHVVYRG----DGSKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNR 320

Query: 1677 ----GESN--PHELIHGRDGKLENSEMASLYEREADRLLDELGPRFVDWWMQKPLPVDGD 1516
                GE N  P  +   ++ +++ S    LYERE DRLLD LGPRFVDWWM KPLPVDGD
Sbjct: 321  SLKDGEENSLPTSIFMDKNLRIDKS----LYEREGDRLLDGLGPRFVDWWMWKPLPVDGD 376

Query: 1515 LLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAAILK 1336
            LLP VVPGFK PFRL PP  R+KL DDELTYLR+LA PLPTHFVLGRNR LQGLA AILK
Sbjct: 377  LLPEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILK 436

Query: 1335 LWEKCHIAKIAVKWGVPNTDNEQMANELKR-------------LTGGVLLLRNKFLIILY 1195
            LWEK  +AKIAVKWG+PNTDNEQMANELK              LTGGVLLLRNKFLIILY
Sbjct: 437  LWEKSLVAKIAVKWGIPNTDNEQMANELKNFKFSDDGVLLMQHLTGGVLLLRNKFLIILY 496

Query: 1194 RGKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLISSDITGTLSEFHR 1015
            RGKDFLP  V  ++ ERE EL  CQ  EE ARLKA E+F +  + L  +   GTLSEF  
Sbjct: 497  RGKDFLPCGVENLIVERERELQICQNHEEGARLKAIETFHLPDEPLEKTSKAGTLSEFQN 556

Query: 1014 MRSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRL 835
            ++S+ G LK G  E +++LEAE + LE+EL+ QE KLFIL  KIEKS+K L +L +  + 
Sbjct: 557  IQSDFGDLKMGNREFELQLEAEIEDLERELRKQERKLFILNIKIEKSAKELSRLNSAWKP 616

Query: 834  AEEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQ 655
             E++PDLE+++ EER CL ++G++I S+L+LGRRG++DGVIEG+HQHWK+REV +VIT Q
Sbjct: 617  REQDPDLEMITEEERQCLHKIGMKINSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQ 676

Query: 654  RTFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSAAVNLLNKKEALS 478
            + F+QV++TAK + AESGGIL+ V KLKEGHAII+YRGKNY+RP K    NLL+K++AL 
Sbjct: 677  KLFAQVIYTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALR 736

Query: 477  RSLEIQRLGSLKFFARQREQAIL 409
            RSLE+QRLG+    +RQ+   I+
Sbjct: 737  RSLEMQRLGAELQESRQKNMKII 759


>ref|XP_007033221.1| maize chloroplast splicing factor CRS1, putative isoform 5 [Theobroma
            cacao] gi|508712250|gb|EOY04147.1| maize chloroplast
            splicing factor CRS1, putative isoform 5 [Theobroma
            cacao]
          Length = 788

 Score =  695 bits (1794), Expect = 0.0
 Identities = 380/746 (50%), Positives = 497/746 (66%), Gaps = 22/746 (2%)
 Frame = -2

Query: 2607 ERGSEDSSAQSSKSIPHSRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEH 2428
            E  S +++++ S S   +   +K PTAPWM  PL ++P+E+ +  +  +K     +  + 
Sbjct: 67   ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSK-AKA 125

Query: 2427 PDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYG 2248
            PD+ L GK  G RG+  MKKI ++ E LQ    LE                         
Sbjct: 126  PDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQIG-------------------- 165

Query: 2247 GDXXXXXXECSKAAEENLNGNEFDIPLFNAGKEVK--SKKLPW-EKEEKMVIRMAKKEKV 2077
                          EE   GN  +   F +  EVK    K+PW  +EEK+V R  KKEK+
Sbjct: 166  ------------IREEFEVGNWLEE--FGSDGEVKRFDGKMPWLREEEKVVFRRMKKEKL 211

Query: 2076 LTAAESSLDEILLERLRNEAALMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPL 1897
            LT AE SLD+ LLERLR +A  M+KW+KVMK GVT+AVVD++   WR +EL +VKF +PL
Sbjct: 212  LTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFGVPL 271

Query: 1896 SRNMGRAREIVELKTGGLVVWGKKDLLAVYRGCNYGSGSENLRNMNYSSARD----QGNS 1729
             RNM RAREI+E+KT GLVVWGKKD L VYRGC++G  S+ + +M Y    D      ++
Sbjct: 272  CRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK-ISSMKYPRCADGQEISSST 330

Query: 1728 SSNITYQNTRTVALETSGESNPHELIHGRDGKLENSEM--------------ASLYEREA 1591
             S++T  N   ++LE    S     ++  D + E+  +               SLYERE 
Sbjct: 331  FSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDENNQPVIGSLYERET 390

Query: 1590 DRLLDELGPRFVDWWMQKPLPVDGDLLPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRL 1411
            DRLLD LGPRF+DWWM+KPLP+D DLLP  VPGF+ P RL PP  R  L DDEL YLR+L
Sbjct: 391  DRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDELKYLRKL 450

Query: 1410 ARPLPTHFVLGRNRNLQGLAAAILKLWEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGV 1231
              PLP HF LG+NRNLQGLAAAILKLWEK  IAKIA+KWG+ NTDNEQMA ELK LTGGV
Sbjct: 451  THPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELKNLTGGV 510

Query: 1230 LLLRNKFLIILYRGKDFLPSEVAKVVAERETELTQCQLREEAARLKASESFSITHDHLIS 1051
            LL+RNKFL+ILYRGKDFLP  VA +V ERE  L +CQL EE AR+K +E+  +  + L  
Sbjct: 511  LLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQVADEPLAK 570

Query: 1050 SDITGTLSEFHRMRSEIGSLKKGKTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSS 871
            +   GTLSEF  +++  G LKK  +E++++LEA+++ LE+EL++QE KL IL  KIEKS+
Sbjct: 571  TSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERELRNQERKLSILNIKIEKSA 630

Query: 870  KVLDKLKNESRLAEEEPDLEILSNEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHW 691
            K L KLK+  + AE++ DLEI++ EER CLR++GL++ S LVLGRRG+++GVIEG++QHW
Sbjct: 631  KELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIEGVYQHW 690

Query: 690  KHREVVKVITMQRTFSQVMHTAKYVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSA 514
            KHREVVKVITMQR F++V++TAK++ AE+GGILV V KLKEGHA+I+YRGKNY+RP K  
Sbjct: 691  KHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYRRPLKLM 750

Query: 513  AVNLLNKKEALSRSLEIQRLGSLKFF 436
              NLL K+EAL +S+E+QR+G   FF
Sbjct: 751  TNNLLTKREALRQSIELQRIGVSPFF 776


>ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 764

 Score =  692 bits (1785), Expect = 0.0
 Identities = 386/744 (51%), Positives = 494/744 (66%), Gaps = 18/744 (2%)
 Frame = -2

Query: 2550 SKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMK 2371
            S +K+PT PW+  PL ++P +        N  +E   +    D+ L  K     G+  ++
Sbjct: 52   SIIKSPTPPWIKSPLHLQPQQ-----HLLNSNVEKSDLS---DKALNSKE--ISGKKVLR 101

Query: 2370 KIFKSFEKLQETHDLEAFSKNRESRKFKFAPGALCGNGDYGGDXXXXXXECSKAAEENLN 2191
            KI    EKL +  D E   KN    +              G +      +C     EN  
Sbjct: 102  KIAHKVEKLHKALDSE---KNETLTQM-------------GSEKVENFGDCLDILMEN-- 143

Query: 2190 GNEFDIPLFNAGKEVKSK-KLPWEKEEKMVIRMAKKEKVLTAAESSLDEILLERLRNEAA 2014
                        +EV +K ++PWEK+EK+     K+EK  +AA+ ++D+++L RLR EAA
Sbjct: 144  ------------EEVVNKGRMPWEKDEKIGFFKVKREKTFSAADLNVDKVVLHRLRGEAA 191

Query: 2013 LMKKWVKVMKAGVTQAVVDQVHFTWRNDELALVKFDLPLSRNMGRAREIVELKTGGLVVW 1834
             M+KWVKV K GVTQ VVD++  +WR +ELA+VKFD+PL +NMGRAREIVE KTGGLV+W
Sbjct: 192  RMRKWVKVKKIGVTQDVVDEIKRSWRMNELAMVKFDIPLCQNMGRAREIVETKTGGLVIW 251

Query: 1833 GKKDLLAVYRGCNYGSGSENLRNMNYSSARDQGNSS-------SNITYQNTRTVALETSG 1675
             KKD L VYRGCNY   S++   ++    R Q  +S       S      +R  + ++S 
Sbjct: 252  CKKDTLVVYRGCNYQLTSKSSPKIHTGYIRSQKTNSYETNEVKSATKGDLSRVESTQSSS 311

Query: 1674 ESNPHELIHGRDGKLENSEM------ASLYEREADRLLDELGPRFVDWWMQKPLPVDGDL 1513
            E       H      +N  M       SLYE+E DRLLD LGPRFVDWWM KPLPVD DL
Sbjct: 312  EILSSNAEHKDSLSTDNYNMNYQPRSGSLYEKECDRLLDGLGPRFVDWWMDKPLPVDADL 371

Query: 1512 LPAVVPGFKTPFRLCPPFNRAKLADDELTYLRRLARPLPTHFVLGRNRNLQGLAAAILKL 1333
            LP VVPGF+ PFRLCPP  R+KL DDELTY R+++ PLPTHFVLGRNR LQGLAAAILKL
Sbjct: 372  LPEVVPGFEPPFRLCPPHARSKLTDDELTYFRKISHPLPTHFVLGRNRGLQGLAAAILKL 431

Query: 1332 WEKCHIAKIAVKWGVPNTDNEQMANELKRLTGGVLLLRNKFLIILYRGKDFLPSEVAKVV 1153
            W+K H AKIA+K+GVPNTDNE MANELKRLTGGVLLLRNKF I+LYRGKDFLP  VA +V
Sbjct: 432  WQKSHTAKIAIKYGVPNTDNEVMANELKRLTGGVLLLRNKFYILLYRGKDFLPRRVAALV 491

Query: 1152 AERETELTQCQLREEAARLKASESFSITHDHL---ISSDITGTLSEFHRMRSEIGSLKKG 982
              RE EL  CQL EE AR KA ++FS + D L     +  +GTL+EF +++ +   +K+ 
Sbjct: 492  ERRELELKSCQLHEEVARAKAIQAFS-SFDELQLPQEASTSGTLTEFMKIQMKFEDIKEV 550

Query: 981  KTEVDVELEAERQRLEKELKDQEHKLFILKKKIEKSSKVLDKLKNESRLAEEEPDLEILS 802
              + ++ LEAE  RLEKELK+Q+HK FIL KKIE+S+  L KL      A E+ DLEI++
Sbjct: 551  NVDSNIALEAEIYRLEKELKEQQHKAFILNKKIERSAMELSKLNAVWTPAGEDIDLEIMT 610

Query: 801  NEERVCLREMGLRIKSSLVLGRRGIYDGVIEGMHQHWKHREVVKVITMQRTFSQVMHTAK 622
            +EER C R+MGL+++S LVLGRRGI+DGV+EG+HQ+WKHRE+ KVITMQR  SQV++T++
Sbjct: 611  DEERECFRKMGLKMRSCLVLGRRGIFDGVLEGLHQYWKHREIAKVITMQRLLSQVIYTSQ 670

Query: 621  YVEAESGGILVDVVKLKEGHAIIVYRGKNYKRP-KSAAVNLLNKKEALSRSLEIQRLGSL 445
            ++E ESGGILV V KLKEGHAII+YRGKNY RP +  A NLL K++AL RSLE+QR+GSL
Sbjct: 671  FLERESGGILVSVDKLKEGHAIIIYRGKNYSRPSQKIAKNLLTKRKALRRSLEMQRIGSL 730

Query: 444  KFFARQREQAILDLKQKLDELSEK 373
            KFFA QRE+ I +LK KL+ L  +
Sbjct: 731  KFFAYQREKTISNLKLKLETLQHR 754