BLASTX nr result

ID: Mentha29_contig00007463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00007463
         (548 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521381.1| PREDICTED: DNA-binding protein S1FA3 [Glycin...    58   1e-06
ref|XP_003554367.1| PREDICTED: DNA-binding protein S1FA3 [Glycin...    57   2e-06
ref|XP_006428828.1| hypothetical protein CICLE_v10013218mg [Citr...    55   9e-06

>ref|XP_003521381.1| PREDICTED: DNA-binding protein S1FA3 [Glycine max]
           gi|255626901|gb|ACU13795.1| unknown [Glycine max]
          Length = 89

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/89 (41%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = -3

Query: 477 MDGDFD----VPPSFDRVKNVARDGGAQGFNPXXXXXXXXXXXXXXXXXXXXXLYTYAQX 310
           M  DFD    VPPSFDRV NV +D G++GFNP                     LY+YAQ 
Sbjct: 1   MADDFDFADKVPPSFDRVGNVIKDSGSKGFNPGLIVLLVVGGLLLTFLIGNYVLYSYAQK 60

Query: 309 XXXXXXXXXXXXXXXXKERLKQGISAPGE 223
                           KERLKQG+SAPGE
Sbjct: 61  TLPPRKKKPVSKKKMKKERLKQGVSAPGE 89


>ref|XP_003554367.1| PREDICTED: DNA-binding protein S1FA3 [Glycine max]
           gi|255626863|gb|ACU13776.1| unknown [Glycine max]
          Length = 89

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/89 (41%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = -3

Query: 477 MDGDFD----VPPSFDRVKNVARDGGAQGFNPXXXXXXXXXXXXXXXXXXXXXLYTYAQX 310
           M  DFD    VPPSFDRV NV +D G++ FNP                     LYTYAQ 
Sbjct: 1   MADDFDFADKVPPSFDRVGNVIKDSGSKAFNPGLIVLLVVGGLLLTFLIGNYVLYTYAQK 60

Query: 309 XXXXXXXXXXXXXXXXKERLKQGISAPGE 223
                           KERLKQG+SAPGE
Sbjct: 61  TLPPRKKKPVSKKKMKKERLKQGVSAPGE 89


>ref|XP_006428828.1| hypothetical protein CICLE_v10013218mg [Citrus clementina]
           gi|568854037|ref|XP_006480642.1| PREDICTED: DNA-binding
           protein S1FA-like [Citrus sinensis]
           gi|557530885|gb|ESR42068.1| hypothetical protein
           CICLE_v10013218mg [Citrus clementina]
          Length = 89

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 35/89 (39%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -3

Query: 477 MDGDFD----VPPSFDRVKNVARDGGAQGFNPXXXXXXXXXXXXXXXXXXXXXLYTYAQX 310
           MD +F+     PPSFDRV N  +D GA+GFNP                     LY YAQ 
Sbjct: 1   MDEEFEFGDKAPPSFDRVGNTVKDAGAKGFNPGLIVLLVVGGLLLVFLIGNYILYMYAQK 60

Query: 309 XXXXXXXXXXXXXXXXKERLKQGISAPGE 223
                           KERLKQG+SAPGE
Sbjct: 61  TLPPKKKKPVSKKKMKKERLKQGVSAPGE 89


Top