BLASTX nr result

ID: Mentha29_contig00007374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00007374
         (304 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004891653.1| unnamed protein product (chloroplast) [Nicot...   101   9e-20
ref|YP_004891654.1| unnamed protein product (chloroplast) [Nicot...    86   5e-15

>ref|YP_004891653.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|351653955|ref|YP_004891682.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|11873|emb|CAA77388.1| hypothetical protein [Nicotiana
           tabacum] gi|1223685|emb|CAA77405.1| hypothetical protein
           [Nicotiana tabacum] gi|77799611|dbj|BAE46700.1|
           hypothetical protein [Nicotiana sylvestris]
           gi|77799641|dbj|BAE46730.1| hypothetical protein
           [Nicotiana sylvestris] gi|80750973|dbj|BAE48049.1|
           hypothetical protein [Nicotiana tomentosiformis]
           gi|80751003|dbj|BAE48079.1| hypothetical protein
           [Nicotiana tomentosiformis] gi|347453933|gb|AEO95591.1|
           hypothetical protein (chloroplast) [Nicotiana undulata]
           gi|347453981|gb|AEO95639.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454044|gb|AEO95701.1| hypothetical protein
           [synthetic construct] gi|347454090|gb|AEO95747.1|
           hypothetical protein [synthetic construct]
           gi|225244|prf||1211235CC ORF 115
          Length = 115

 Score =  101 bits (252), Expect = 9e-20
 Identities = 59/98 (60%), Positives = 61/98 (62%), Gaps = 35/98 (35%)
 Frame = -1

Query: 190 NKRARIESVLIYR--PA---------------------------------PTPEYMLQQE 116
           NKRARIESVLIYR  P+                                 P PEYMLQQE
Sbjct: 5   NKRARIESVLIYRFDPSSWNWNKFGSGSRNLGDLLYLMNGESALKSSALHPPPEYMLQQE 64

Query: 115 SHKGRLETSGKMPARHPADKVHYIVQGLATCPFSDFGT 2
           SHKGRLETSGKMPAR+PADKVHYIVQGLAT PFSDFGT
Sbjct: 65  SHKGRLETSGKMPARNPADKVHYIVQGLATYPFSDFGT 102


>ref|YP_004891654.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|351653956|ref|YP_004891683.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|11872|emb|CAA77387.1| hypothetical protein [Nicotiana
           tabacum] gi|1223686|emb|CAA77406.1| hypothetical protein
           [Nicotiana tabacum] gi|77799612|dbj|BAE46701.1|
           hypothetical protein [Nicotiana sylvestris]
           gi|77799642|dbj|BAE46731.1| hypothetical protein
           [Nicotiana sylvestris] gi|80750974|dbj|BAE48050.1|
           hypothetical protein [Nicotiana tomentosiformis]
           gi|80751004|dbj|BAE48080.1| hypothetical protein
           [Nicotiana tomentosiformis] gi|347453934|gb|AEO95592.1|
           hypothetical protein (chloroplast) [Nicotiana undulata]
           gi|347453982|gb|AEO95640.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454045|gb|AEO95702.1| hypothetical protein
           [synthetic construct] gi|347454091|gb|AEO95748.1|
           hypothetical protein [synthetic construct]
           gi|225245|prf||1211235CD ORF 92
          Length = 92

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 50/92 (54%), Positives = 52/92 (56%), Gaps = 35/92 (38%)
 Frame = +1

Query: 19  MGKSPIPGLCNVLYPLGDGRAFYQRFLIYPCVIPVEAYTLG------------------- 141
           MGKSPIPGLCNVLY LG GRAFYQRFLIYPCVIPVEAYT G                   
Sbjct: 1   MGKSPIPGLCNVLYLLGYGRAFYQRFLIYPCVIPVEAYTRGVGAGRTILKRTPHSLDRED 60

Query: 142 ----------------WVQVGISIPIRSELSY 189
                             ++GISIPIRSELSY
Sbjct: 61  HQDFAIRCRIYSNSKSSDRIGISIPIRSELSY 92


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