BLASTX nr result

ID: Mentha29_contig00007373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00007373
         (311 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1211235CE ORF 79                                                  92   6e-17
ref|NP_054546.1| hypothetical protein NitaCp072 [Nicotiana tabac...    91   1e-16
ref|YP_001430147.1| hypothetical protein CureCp061 [Cuscuta refl...    59   5e-08
ref|YP_001109547.1| hypothetical protein Poptr_cp068 [Populus tr...    62   7e-08
ref|NP_054976.1| hypothetical protein SpolCp072 [Spinacia olerac...    62   8e-08

>prf||1211235CE ORF 79
          Length = 79

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 49/64 (76%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = -3

Query: 234 VMYGIYDKGGVFLLIGHIGPSWTSNCFDLNYPENAL-CIYQKDGQSNLFYFSIQ*KLKEV 58
           VMYGIYDKGG      HIGPSWTSNCFDLNYPENA+  IYQKDGQSNLF  S    LKEV
Sbjct: 1   VMYGIYDKGGSIDRSCHIGPSWTSNCFDLNYPENAMPDIYQKDGQSNLFLDS----LKEV 56

Query: 57  NRVP 46
           NRVP
Sbjct: 57  NRVP 60


>ref|NP_054546.1| hypothetical protein NitaCp072 [Nicotiana tabacum]
           gi|11466029|ref|NP_054571.1| hypothetical protein
           NitaCp098 [Nicotiana tabacum]
           gi|78102586|ref|YP_358726.1| hypothetical protein
           NisyCp082 [Nicotiana sylvestris]
           gi|78102613|ref|YP_358752.1| hypothetical protein
           NisyCp111 [Nicotiana sylvestris]
           gi|81301616|ref|YP_398912.1| hypothetical protein
           NitoCp081 [Nicotiana tomentosiformis]
           gi|81301643|ref|YP_398938.1| hypothetical protein
           NitoCp109 [Nicotiana tomentosiformis]
           gi|351653909|ref|YP_004891655.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|351653954|ref|YP_004891681.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|4388760|emb|CAA77389.1| hypothetical protein
           [Nicotiana tabacum] gi|4388762|emb|CAA77404.1|
           hypothetical protein [Nicotiana tabacum]
           gi|77799613|dbj|BAE46702.1| hypothetical protein
           [Nicotiana sylvestris] gi|77799640|dbj|BAE46729.1|
           hypothetical protein [Nicotiana sylvestris]
           gi|80750975|dbj|BAE48051.1| hypothetical protein
           [Nicotiana tomentosiformis] gi|80751002|dbj|BAE48078.1|
           hypothetical protein [Nicotiana tomentosiformis]
           gi|347453935|gb|AEO95593.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347453980|gb|AEO95638.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454046|gb|AEO95703.1| hypothetical protein
           [synthetic construct] gi|347454089|gb|AEO95746.1|
           hypothetical protein [synthetic construct]
          Length = 79

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 48/64 (75%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = -3

Query: 234 VMYGIYDKGGVFLLIGHIGPSWTSNCFDLNYPENAL-CIYQKDGQSNLFYFSIQ*KLKEV 58
           +MYGIYDKGG      HIGPSWTSNCFDLNYPENA+  IYQKDGQSNLF  S    LKEV
Sbjct: 1   MMYGIYDKGGSIDRSCHIGPSWTSNCFDLNYPENAMPDIYQKDGQSNLFLDS----LKEV 56

Query: 57  NRVP 46
           NRVP
Sbjct: 57  NRVP 60


>ref|YP_001430147.1| hypothetical protein CureCp061 [Cuscuta reflexa]
           gi|156618874|ref|YP_001430155.1| hypothetical protein
           CureCp070 [Cuscuta reflexa]
           gi|401482|sp|P32035.1|YCX1_CUSRE RecName:
           Full=Uncharacterized 6.8 kDa protein in trnL 3'region;
           AltName: Full=ORF 55 gi|12523|emb|CAA47850.1| unnamed
           protein product [Cuscuta reflexa]
           gi|156556051|emb|CAM98434.1| hypothetical protein
           [Cuscuta reflexa] gi|156556059|emb|CAM98442.1|
           hypothetical protein [Cuscuta reflexa]
           gi|1096970|prf||2113216D ORF 55
          Length = 55

 Score = 58.5 bits (140), Expect(2) = 5e-08
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = -2

Query: 187 SYRPELDIQLLRFELSGECLMYISKRWPIKPILFLDSIEAQRGE 56
           SYR +LDIQLLRFELSGECL+ ISKRW IKP+    S   QRGE
Sbjct: 16  SYRTQLDIQLLRFELSGECLIDISKRWTIKPL----SRFTQRGE 55



 Score = 24.3 bits (51), Expect(2) = 5e-08
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 227 MEYMTKVEYFY*SVI 183
           MEYM +VEY Y SV+
Sbjct: 1   MEYMKRVEYLYRSVM 15


>ref|YP_001109547.1| hypothetical protein Poptr_cp068 [Populus trichocarpa]
           gi|134093271|ref|YP_001109572.1| hypothetical protein
           Poptr_cp095 [Populus trichocarpa]
           gi|133712108|gb|ABO36751.1| conserved hypothetical
           protein [Populus trichocarpa]
           gi|133712133|gb|ABO36776.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 61

 Score = 62.0 bits (149), Expect(2) = 7e-08
 Identities = 32/43 (74%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = -3

Query: 186 HIGPSWTSNCFDLNYPENALCI-YQKDGQSNLFYFSIQ*KLKE 61
           HIGPS TSNCFDLNYPE+AL I YQK+GQSNLF  SI+ K  E
Sbjct: 19  HIGPSQTSNCFDLNYPEDALSILYQKNGQSNLFLDSIEAKRGE 61



 Score = 20.4 bits (41), Expect(2) = 7e-08
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 227 MEYMTKVE 204
           MEYMTKVE
Sbjct: 1   MEYMTKVE 8


>ref|NP_054976.1| hypothetical protein SpolCp072 [Spinacia oleracea]
           gi|11497597|ref|NP_055003.1| hypothetical protein
           SpolCp101 [Spinacia oleracea] gi|7636149|emb|CAB88771.1|
           hypothetical protein [Spinacia oleracea]
           gi|7636178|emb|CAB88800.1| hypothetical protein
           [Spinacia oleracea]
          Length = 57

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/37 (81%), Positives = 31/37 (83%)
 Frame = -2

Query: 208 WSISIDRSYRPELDIQLLRFELSGECLMYISKRWPIK 98
           WSISIDRSYRP  DIQLLRF LSG  L+YISKRW IK
Sbjct: 10  WSISIDRSYRPGSDIQLLRFALSGGYLIYISKRWTIK 46


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