BLASTX nr result
ID: Mentha29_contig00004409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00004409
(793 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus... 270 3e-70
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 236 5e-60
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 236 7e-60
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 219 1e-54
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 219 1e-54
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 214 3e-53
ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, I... 211 3e-52
gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subun... 210 4e-52
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun... 208 2e-51
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 208 2e-51
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 206 1e-50
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 206 1e-50
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 206 1e-50
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8... 204 2e-50
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I... 204 3e-50
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ... 203 5e-50
gb|ABK26380.1| unknown [Picea sitchensis] 202 1e-49
ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cac... 201 2e-49
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S... 201 2e-49
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I... 200 4e-49
>gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus guttatus]
Length = 145
Score = 270 bits (691), Expect = 3e-70
Identities = 134/145 (92%), Positives = 141/145 (97%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
MVETLFEDIFR+D +DPDGKKFDRVSRISARSEQFDMLM LDINTEIYPMR+G+KFMMVL
Sbjct: 1 MVETLFEDIFRVDELDPDGKKFDRVSRISARSEQFDMLMFLDINTEIYPMRTGDKFMMVL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLM 539
ASTLNLDGTPD+GY+ PGNKKSLADKFDYVMQGKLYRISEESREKQVKADI+VSFGGLLM
Sbjct: 61 ASTLNLDGTPDSGYFAPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIFVSFGGLLM 120
Query: 540 MLKGDPSIAARFELDQKLFILIRKV 614
LKGDPSIAARFELDQKLFILIRKV
Sbjct: 121 QLKGDPSIAARFELDQKLFILIRKV 145
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 236 bits (603), Expect = 5e-60
Identities = 118/145 (81%), Positives = 128/145 (88%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
MVETLFEDIF + DPDGKKFDRV+RI ARSEQFDM M LDINTEIYPMR +KFMMVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLM 539
ASTLNLDGTPDTGY+ GNKKSLADKF+YVM GKLYRISEE K VKADI+VSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 540 MLKGDPSIAARFELDQKLFILIRKV 614
L+GDPSIAA+FELDQK+F+LIRKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like isoform 1 [Solanum lycopersicum]
gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
isoform 2 [Solanum lycopersicum]
Length = 145
Score = 236 bits (602), Expect = 7e-60
Identities = 117/145 (80%), Positives = 128/145 (88%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
MVETLFEDIF + DPDGKKFDRV+RI ARSEQFDM M LD+NTEIYPMR +KFMMVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLM 539
ASTLNLDGTPDTGY+ GNKKSLADKF+YVM GKLYRISEE K VKADI+VSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 540 MLKGDPSIAARFELDQKLFILIRKV 614
L+GDPSIAA+FELDQK+F+LIRKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 219 bits (557), Expect = 1e-54
Identities = 108/146 (73%), Positives = 123/146 (84%), Gaps = 1/146 (0%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
MVE LFEDIF + +DPDGKKFDRVSRI ARSEQFDM M LD+ TE+YPMR+G++F MVL
Sbjct: 251 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 310
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQ-VKADIYVSFGGLL 536
A TLNLDGTPDTG+YT +K+LADKFDYVM GKLY+ISE+S Q K +IY SFGGLL
Sbjct: 311 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 370
Query: 537 MMLKGDPSIAARFELDQKLFILIRKV 614
MMLKGDPS AA FELDQ+LF+LIRKV
Sbjct: 371 MMLKGDPSSAASFELDQRLFLLIRKV 396
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 219 bits (557), Expect = 1e-54
Identities = 108/146 (73%), Positives = 123/146 (84%), Gaps = 1/146 (0%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
MVE LFEDIF + +DPDGKKFDRVSRI ARSEQFDM M LD+ TE+YPMR+G++F MVL
Sbjct: 46 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 105
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQ-VKADIYVSFGGLL 536
A TLNLDGTPDTG+YT +K+LADKFDYVM GKLY+ISE+S Q K +IY SFGGLL
Sbjct: 106 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 165
Query: 537 MMLKGDPSIAARFELDQKLFILIRKV 614
MMLKGDPS AA FELDQ+LF+LIRKV
Sbjct: 166 MMLKGDPSSAASFELDQRLFLLIRKV 191
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 214 bits (545), Expect = 3e-53
Identities = 106/146 (72%), Positives = 121/146 (82%), Gaps = 1/146 (0%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
MVE LFEDIF + +DPDGKKFDRVSRI ARSEQFDM M LD+ TE+YPMR G+KF MVL
Sbjct: 1 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEE-SREKQVKADIYVSFGGLL 536
A TLNLDGTPD G+YT +K+LADK+DYVM GKLY+ISE+ S + K +IY SFGGLL
Sbjct: 61 APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120
Query: 537 MMLKGDPSIAARFELDQKLFILIRKV 614
MMLKGDPS AA FELDQ+LF+LIRKV
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146
>ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Cucumis sativus]
gi|449484745|ref|XP_004156968.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
[Cucumis sativus]
Length = 144
Score = 211 bits (536), Expect = 3e-52
Identities = 102/145 (70%), Positives = 125/145 (86%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
MVE LF+DIF+I+ ++PDGKKFD+V+RI A+SE+FDM MHLDIN+EIYP++ GEKF M L
Sbjct: 1 MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLM 539
A TLNLDGTPDTGY+ GN+KSLAD+++YVMQGKL+RISE S KA+I SFGGLLM
Sbjct: 61 APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRISESSGHGG-KAEIDASFGGLLM 119
Query: 540 MLKGDPSIAARFELDQKLFILIRKV 614
MLKGDPS ++FELDQ+LF+LIRKV
Sbjct: 120 MLKGDPSHCSKFELDQRLFLLIRKV 144
>gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Morus
notabilis]
Length = 187
Score = 210 bits (535), Expect = 4e-52
Identities = 101/145 (69%), Positives = 122/145 (84%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
M E LFEDIF+ID ++PDGKKFD+V+RI A+SE+FDM MHLD+ T++YPM GEKF M L
Sbjct: 1 MAEFLFEDIFKIDRLNPDGKKFDKVTRIEAKSEKFDMFMHLDVGTDVYPMNEGEKFSMAL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLM 539
+STLN DGTPDTGYYTPGN+K+LAD ++YVMQGKLYRI+E S KA+I SFGGLLM
Sbjct: 61 SSTLNEDGTPDTGYYTPGNRKTLADNYEYVMQGKLYRIAEGSGH-HGKAEIDASFGGLLM 119
Query: 540 MLKGDPSIAARFELDQKLFILIRKV 614
MLKGDPS ++ELDQ+LF+LIRKV
Sbjct: 120 MLKGDPSYFKKYELDQRLFLLIRKV 144
>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
[Aegilops tauschii]
Length = 220
Score = 208 bits (530), Expect = 2e-51
Identities = 103/148 (69%), Positives = 118/148 (79%), Gaps = 3/148 (2%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
M E LFEDIF + IDPDGKKFDRV+RI ARSEQ +M M LDI T++YPM G+KF MVL
Sbjct: 1 MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQ---VKADIYVSFGG 530
A TLNLDGTPDTGYYT +K+LADK+DYVM GKLY+ISE++ K K +IY SFGG
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120
Query: 531 LLMMLKGDPSIAARFELDQKLFILIRKV 614
LLM+LKGDPS AA ELDQKLF+LIRKV
Sbjct: 121 LLMLLKGDPSSAANLELDQKLFLLIRKV 148
>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3 isoform 1 [Vitis vinifera]
gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3 isoform 2
[Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
protein product [Vitis vinifera]
Length = 145
Score = 208 bits (529), Expect = 2e-51
Identities = 102/145 (70%), Positives = 118/145 (81%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
M TLF DIF++ IDPDGKKFD+VSRI A+SEQ DM M LD+NTEIYPM +GEKF M L
Sbjct: 1 MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLM 539
ASTL+LDGTPDTGYYT +KSLADKF+YVM GKLY+ISEE VK IYVSFGGLLM
Sbjct: 61 ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120
Query: 540 MLKGDPSIAARFELDQKLFILIRKV 614
ML GDP+ A+ +LDQ++F+LIRKV
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145
>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Citrus
sinensis] gi|557545143|gb|ESR56121.1| hypothetical
protein CICLE_v10022723mg [Citrus clementina]
Length = 146
Score = 206 bits (523), Expect = 1e-50
Identities = 95/141 (67%), Positives = 119/141 (84%)
Frame = +3
Query: 192 LFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVLASTL 371
LFEDIF ++ IDPDGKKFD+VSRI A S+ DM M LD+N+E+YPMR G+KF M LA TL
Sbjct: 6 LFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTL 65
Query: 372 NLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKG 551
NLDGTPDTGYYTPG +K+LADK++Y+M GKL++I +E K +KA+IYVS+GGLLMMLKG
Sbjct: 66 NLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKG 125
Query: 552 DPSIAARFELDQKLFILIRKV 614
DPS + FELDQ+LF+L+RK+
Sbjct: 126 DPSYVSHFELDQRLFLLMRKL 146
>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
gi|241919960|gb|EER93104.1| hypothetical protein
SORBIDRAFT_01g001330 [Sorghum bicolor]
Length = 145
Score = 206 bits (523), Expect = 1e-50
Identities = 96/145 (66%), Positives = 119/145 (82%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
M E LFED F + +DPDGKKFD+VSR+ ARSEQ M M LD+ T++YP+R+GEKF MVL
Sbjct: 1 MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLM 539
A TLNLDGTPDTGYYT +K+LAD ++YVMQGKLY+ISE++ + K +IY SFGGLLM
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120
Query: 540 MLKGDPSIAARFELDQKLFILIRKV 614
+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145
>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
DNA-directed RNA polymerases I, II, and III 17.1 kDa
polypeptide, putative [Ricinus communis]
Length = 146
Score = 206 bits (523), Expect = 1e-50
Identities = 96/141 (68%), Positives = 118/141 (83%)
Frame = +3
Query: 192 LFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVLASTL 371
LFEDIF +D +DPDGKKFD+VSRI A S+ DM MHLD+NTEIYPM G+KF M LA TL
Sbjct: 6 LFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHTL 65
Query: 372 NLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKG 551
NLDGTPDTGYYT G +K+LADK++Y+M GKLY+ISEE K VKA++ VS+GGLLM+L+G
Sbjct: 66 NLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLRG 125
Query: 552 DPSIAARFELDQKLFILIRKV 614
DPS + FELDQ+LF+L+RK+
Sbjct: 126 DPSHVSHFELDQRLFLLMRKL 146
>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 1 [Zea mays]
gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 2 [Zea mays]
gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 3 [Zea mays]
gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 4 [Zea mays]
Length = 146
Score = 204 bits (520), Expect = 2e-50
Identities = 98/146 (67%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
M E LFED F + +DPDGKKFDRVSR+ ARSEQ DM M LD+ T++YPM +GEKF MV+
Sbjct: 1 MSEHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQ-VKADIYVSFGGLL 536
A TLNLDGTPDTGYYT +K+LAD ++YVMQGKLY+ISE++ Q K ++Y SFGGLL
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120
Query: 537 MMLKGDPSIAARFELDQKLFILIRKV 614
M+L+GDPS AA FELDQ+LF+LIRKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146
>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 146
Score = 204 bits (519), Expect = 3e-50
Identities = 101/146 (69%), Positives = 118/146 (80%), Gaps = 1/146 (0%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
M E LFEDIF ++ IDPDGKKFDRV+RI ARSEQF M M LD+ T +YPM +G+KF MVL
Sbjct: 1 MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQ-VKADIYVSFGGLL 536
A TLNLDGTPDTGYYT +K+LADK+DYVM GKLY+ISE+S Q K + Y SFGGLL
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120
Query: 537 MMLKGDPSIAARFELDQKLFILIRKV 614
M+LKGDPS AA ELDQ+LF+L+RKV
Sbjct: 121 MLLKGDPSSAANLELDQRLFLLMRKV 146
>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
[Zea mays]
Length = 146
Score = 203 bits (517), Expect = 5e-50
Identities = 97/146 (66%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
M + LFED F + +DPDGKKFDRVSR+ ARSEQ DM M LD+ T++YPM +GEKF MV+
Sbjct: 1 MSDHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQ-VKADIYVSFGGLL 536
A TLNLDGTPDTGYYT +K+LAD ++YVMQGKLY+ISE++ Q K ++Y SFGGLL
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120
Query: 537 MMLKGDPSIAARFELDQKLFILIRKV 614
M+L+GDPS AA FELDQ+LF+LIRKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146
>gb|ABK26380.1| unknown [Picea sitchensis]
Length = 145
Score = 202 bits (514), Expect = 1e-49
Identities = 98/145 (67%), Positives = 115/145 (79%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
MVE LFEDIF + IDPDGKKFD+VSRI ARSEQFDM M LD+N ++YP+ GEKF + L
Sbjct: 1 MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLM 539
A TLNLDGTPD GY+ G +KSLADK++YVM GKLY +SEE VK +I SFGGLLM
Sbjct: 61 APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120
Query: 540 MLKGDPSIAARFELDQKLFILIRKV 614
+LKGDPS A FELDQ+LF+L+RKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145
>ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
gi|508721888|gb|EOY13785.1| RNA polymerase Rpb8 isoform
1 [Theobroma cacao]
Length = 145
Score = 201 bits (512), Expect = 2e-49
Identities = 94/140 (67%), Positives = 120/140 (85%)
Frame = +3
Query: 195 FEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVLASTLN 374
FEDIF +D +DPDGKKFD+V+RI ARS+ DM MHLD+N+EIYPM G+KF M LA TLN
Sbjct: 7 FEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHTLN 66
Query: 375 LDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGD 554
LDGTPDTGYYTPG +KSLADK++YVM GKLY++S++ K +KA+IYVS+GGLLMML+G+
Sbjct: 67 LDGTPDTGYYTPG-RKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLRGE 125
Query: 555 PSIAARFELDQKLFILIRKV 614
S ++FELDQ+LF+L+RK+
Sbjct: 126 ASHVSQFELDQRLFLLMRKL 145
>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
gi|241917379|gb|EER90523.1| hypothetical protein
SORBIDRAFT_01g001420 [Sorghum bicolor]
Length = 145
Score = 201 bits (512), Expect = 2e-49
Identities = 95/145 (65%), Positives = 117/145 (80%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
M E LFED F ++ +DPDGKKFDRVSR+ ARSEQ M M LD+ T++YPM+ EKF MVL
Sbjct: 1 MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLM 539
A TLNLDGTPDTGYYT +K+LAD ++YVM GKLY+ISE++ + K +IY SFGGLLM
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLM 120
Query: 540 MLKGDPSIAARFELDQKLFILIRKV 614
+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145
>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 144
Score = 200 bits (509), Expect = 4e-49
Identities = 101/146 (69%), Positives = 118/146 (80%), Gaps = 1/146 (0%)
Frame = +3
Query: 180 MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRSGEKFMMVL 359
M E LFEDIF + IDPDGKKFDRV+RI ARSEQ M M LD+ T++YPM +G+KF MVL
Sbjct: 1 MAEHLFEDIFVVSRIDPDGKKFDRVNRIEARSEQ--MYMQLDVATDVYPMHAGDKFTMVL 58
Query: 360 ASTLNLDGTPDTGYYTPGNKKSLADKFDYVMQGKLYRISEESREKQ-VKADIYVSFGGLL 536
A TLNLDGTPDTGYYT +K+LADK+DYVM GKLY+ISE+S Q K +IY SFGGLL
Sbjct: 59 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLL 118
Query: 537 MMLKGDPSIAARFELDQKLFILIRKV 614
M+LKGDPS AA ELDQ+LF+L+RKV
Sbjct: 119 MLLKGDPSSAANLELDQRLFLLMRKV 144