BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00002953
         (5953 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]  1121   0.0  
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]              1118   0.0  
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]  1058   0.0  
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...  1054   0.0  
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...  1033   0.0  
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]    1033   0.0  
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...  1033   0.0  
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...  1032   0.0  
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]        1030   0.0  
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]        1030   0.0  
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...  1029   0.0  
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...  1029   0.0  
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]    1029   0.0  
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                      1028   0.0  
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]        1026   0.0  
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]        1025   0.0  
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc...  1027   0.0  
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...  1027   0.0  
gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subc...  1022   0.0  
emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]          1025   0.0  

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 1121 bits (2900), Expect = 0.0
 Identities = 591/1289 (45%), Positives = 826/1289 (64%), Gaps = 24/1289 (1%)
 Frame = -1

Query: 4105 NLSDLSKLEPLDGSNYKRWSQKLLIFFQQIEISYVLVQDXXXXXXXXXXXXXXXXXXXXX 3926
            ++S   K E   G N+KRW QK+L +   + ++  L +D                     
Sbjct: 34   SVSPGEKPEKFSGLNFKRWQQKMLFYLTTLNLARFLTEDAPKLKEDEHDIQVISAIDA-- 91

Query: 3925 XXXXXVKYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVT 3746
                   ++  +   R +++  + D+L++++ D   AKE+WE L  KY  +DAG KK+V 
Sbjct: 92   -------WKHSDFLCRNYVMNGLADSLYNVYSDKKTAKELWESLDRKYKTEDAGAKKFVV 144

Query: 3745 GKWMDFKLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIK 3566
            G+++D+K+++ K ++S++ E + +   + AEGM + E  +   ++EKLPP+W D++N +K
Sbjct: 145  GRFLDYKMVDSKTVVSQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNYLK 204

Query: 3565 HKKRDFTLKELISHMRTEEANRIKDKS-SNLVNFSGANLVESGGAS--------GSGKPH 3413
            HK+++ ++++LI  +R EE NR  +K  ++ +N + AN VE G +S        G G   
Sbjct: 205  HKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGKGSKL 264

Query: 3412 G-----FKKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPK 3248
            G      KK KF GK                C+ CG  GHKS  C  R    NK      
Sbjct: 265  GPKGGISKKPKFQGK----------------CFNCGKQGHKSVDC--RLPKKNK------ 300

Query: 3247 PPNQANLAETDAKAEKEGDGNDVIAAVTEANLV-ENKNDWVLDTGASRHFCSNRSLFQNF 3071
             P +AN+ +   K   +    D+ A V+E NLV  N  +W +DTGA+RH CS++ +F  F
Sbjct: 301  -PKEANVIDDITKNVYD---IDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTF 356

Query: 3070 EDAAEGECVYMGNXXXXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAG 2891
            E    GE V+MGN                        +NV++VP +R+NLVSG LL   G
Sbjct: 357  EPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHG 416

Query: 2890 LKLVFESDRVVMTKSGDFVGKGYLCDGLFVLNVESEIMNE--NASSSAYLIESLDVWHGR 2717
             +LVF S++VV++KSG +VGKGY+ DG++ LNV + I +    AS+S Y++ES ++WHGR
Sbjct: 417  FRLVFXSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGR 476

Query: 2716 LGHVNYASIKKLRSMGLIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTD 2537
            LGHVNY ++++L ++  IP         KCE CVEAK T+  F++V+ R+T  L+LIH+D
Sbjct: 477  LGHVNYDTLRRLINLNHIPTFQINSNH-KCETCVEAKLTRSSFQSVE-RNTEPLDLIHSD 534

Query: 2536 LAEFKGVISRGGKRYYISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRV 2357
            + + K V +RGG +Y+I+FVDD ++Y  +YLL++KDEA E  + +KTEV+NQLN KIK +
Sbjct: 535  ICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVL 594

Query: 2356 RSDRGGEYSTLFLKDFCEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSE 2177
            RSDRGGEY + F+ D C +HGIIHE T PYSP  NG+AERKNRTLK M  AML+SS L +
Sbjct: 595  RSDRGGEYESPFV-DICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLPQ 653

Query: 2176 NMWGEAVLSACYVLNRVPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIG 1997
            NMWGEA+L+A Y+LN+VP KK +KTPYELWK   P+   L++WGCLAKV +  PK+V IG
Sbjct: 654  NMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIG 713

Query: 1996 SKTFDCVFIGYAQNSAAYRFLT-------IGDKSICESRDAEFFEHIFPMKTNXXXXXXX 1838
             KT DC+FIGYA NS AYRFL        I   +I ESR+A FFE +FP K+        
Sbjct: 714  PKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKSKEEP---- 769

Query: 1837 STSGNASVEQSGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAF 1658
              S +  + +S   ++E+E  VEPRRSKR RTEK++G DF+T                 F
Sbjct: 770  --SSSKRMLESQDQNEEVE--VEPRRSKRVRTEKSFGPDFLT-----------------F 808

Query: 1657 MICEDPVSYRAAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKL 1478
            M+  +P +++ A++S +   WKEAI+SEIDSI  NHTW+LV+LP  CKP+ SKWIFK+K+
Sbjct: 809  MLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKM 868

Query: 1477 KPDGSIDRFKARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKT 1298
            K DGSID++KARLV+ G  Q + +D+FDTYSPV RI++IR ++A+A++ +L +HQMD+K 
Sbjct: 869  KVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDMK- 927

Query: 1297 AFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVV 1118
                     EIY+ QPEG    G E KVC+L +SLYGLKQAP QW+EKF N +L +GF +
Sbjct: 928  ---------EIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKI 978

Query: 1117 SGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILG 938
            +  + C+Y K      V++CLYVDDMLI G+   ++  TK  L+S FDMKD+G ADVILG
Sbjct: 979  NECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILG 1038

Query: 937  IKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARIL 758
            IK+ RT+    LSQSHY++++L +F+  +    RTP D ++HL KN G++VSQ +Y+RI+
Sbjct: 1039 IKIKRTSNELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRII 1098

Query: 757  GSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVM 578
            GS+MYL +CTRPDIAYAV +LSRYT  P  +HW  + R++KYL+ T+D  L Y+R+P V+
Sbjct: 1099 GSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAVL 1158

Query: 577  EGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAK 398
            EGY DANW+S+  D  S SG+VFTLGG AVSWKS KQT IA STMESEFIAL+    EA+
Sbjct: 1159 EGYSDANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAE 1218

Query: 397  WLRELLADIPLGKRSDAPISLHCDSQSAI 311
            WLR  L DIP   +   PI +HCDSQSAI
Sbjct: 1219 WLRHFLEDIPRWSKPVPPICIHCDSQSAI 1247



 Score = 66.6 bits (161), Expect = 1e-07
 Identities = 28/63 (44%), Positives = 47/63 (74%)
 Frame = -2

Query: 303  AKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGI 124
            A++++YNGK RHIR +H  +R+++  GVIS+D+V+++ N+ADP TK L +  VE+   G+
Sbjct: 1250 AQSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRELVEKSSXGM 1309

Query: 123  GMK 115
             +K
Sbjct: 1310 XLK 1312


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 1118 bits (2891), Expect = 0.0
 Identities = 580/1269 (45%), Positives = 818/1269 (64%), Gaps = 7/1269 (0%)
 Frame = -1

Query: 4096 DLSKLEPLDGSNYKRWSQKLLIFFQQIEISYVLVQDXXXXXXXXXXXXXXXXXXXXXXXX 3917
            D+SK+E   G N++RW +++        +++ L                           
Sbjct: 32   DVSKIEVFTGQNFRRWQERVSTLLDMYGVAHALTT---------------AKPDSTTAAK 76

Query: 3916 XXVKYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKW 3737
                +   N   R  +L+ +++ LFD++     AK+IW+ L  KY  +D   +++V  K+
Sbjct: 77   QVDDWIHANKVCRHTLLSVLSNDLFDVYASYKNAKDIWDSLILKYTAEDIVRQRFVIAKY 136

Query: 3736 MDFKLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKK 3557
              +++++ K +  +++EY  L   +  E +++ +   + +L+EKLP SW DY+  +KH++
Sbjct: 137  YRWEMIKGKDIKIQINEYHKLIEDIKTESIKLPDEFVSELLIEKLPQSWTDYKQQLKHRQ 196

Query: 3556 RDFTLKELISHMRTEEANRIKDKSSNLVNFSG-ANLVESGGASGSGKPHGFKKQKFNGKN 3380
            +  +L +LI+H+  E+ NR +  ++     S  AN++E   A    +     K+K N K 
Sbjct: 197  KQMSLSDLITHIIIEDTNRKECAAAKAKALSAKANVIEDKPAPKRYEKKFDHKKKPNNKF 256

Query: 3379 PNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKAEK 3200
                      K K  C+ CG PGH + QC  R     K  + PK    ANLAE +     
Sbjct: 257  SRPSGTNPTFKKKGNCFVCGKPGHHAPQCRHRA----KNDYPPK----ANLAEGE----- 303

Query: 3199 EGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE-CVYMGNXXX 3023
                + ++A V++ NLV N + WV+D+GA+RH C+NR++F ++    +GE  VY+G+   
Sbjct: 304  ----DTIVAVVSQVNLVTNVSKWVVDSGATRHICANRNVFTSYTSVGDGEEQVYLGDSRT 359

Query: 3022 XXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKSG 2843
                                 ++V+ VPS+R NLVS  LL K G+K+ FESD++V+TK+ 
Sbjct: 360  TPVLGKGKVLLKLTSGKTLALNDVLHVPSIRVNLVSVALLSKVGVKVSFESDKIVITKNN 419

Query: 2842 DFVGKGYLCDGLFVLNVESEIMNENASSSAYLIESLDVWHGRLGHVNYASIKKLRSMGLI 2663
             FVGKGY   GLFVLN+ SEIMNE+ +SSAY+++S D+WH RLGHVN + + KL+ +GLI
Sbjct: 420  VFVGKGYCDQGLFVLNI-SEIMNES-TSSAYIVDSYDIWHARLGHVNSSYVIKLQRLGLI 477

Query: 2662 PNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYYIS 2483
                +    +KC+                     +L LIHTDLA+ K  +SRGGK Y+++
Sbjct: 478  N--MHDKESSKCDK--------------------ILGLIHTDLADLKQTMSRGGKNYFVT 515

Query: 2482 FVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDFCE 2303
            F+DDFSRYT++YL++ KDEA +  L +K EV+NQLN KIKR+RSDRGGEY  +   D+C 
Sbjct: 516  FIDDFSRYTKVYLIKHKDEAFDMFLTYKAEVENQLNKKIKRIRSDRGGEY--VLFNDYCV 573

Query: 2302 KHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNRVP 2123
            K GIIHE T PYSP  NG+AERKNRTLK M  AML+SS   +N+WGE++L+AC++ NR+P
Sbjct: 574  KEGIIHEVTPPYSPESNGVAERKNRTLKEMMNAMLISSNAPDNLWGESLLTACFLQNRIP 633

Query: 2122 HKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSAAY 1943
            H+K  KTPYELWK + P L+ L+VWG LAKV L DPK+  IGSKT DC+F+GYA++SAAY
Sbjct: 634  HRKTGKTPYELWKGYQPNLKYLRVWGSLAKVMLPDPKKRKIGSKTSDCMFLGYAEHSAAY 693

Query: 1942 RFLTIGD-----KSICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASVEQSGQLSQEIEI 1778
            RFL +        +I E+++AEFFEHIFP+K++        TS       S  LS+++  
Sbjct: 694  RFLVLNSDIIERNTIVETKNAEFFEHIFPLKSSG-------TSEQPIDSVSDTLSEDV-- 744

Query: 1777 AVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDTPF 1598
                RRSKRQR E ++G DF T                 +++  DP+S+  A S+ D   
Sbjct: 745  ----RRSKRQRKETSFGNDFYT-----------------YLVENDPISFVEATSAPDAKH 783

Query: 1597 WKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFKARLVVVGCSQ 1418
            W +AI++E++SI  N+TW LV+LP   KPI  KWIFKKK  PDGSI+++KARLV  G +Q
Sbjct: 784  WDKAIKTELESIKKNNTWTLVDLPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQ 843

Query: 1417 KKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCV 1238
            K ++D+FDT++PV RIS+IR L+ALASIH LV+HQMDVKT FLNG+L+EEIY+ QPEGCV
Sbjct: 844  KHNIDYFDTFAPVTRISSIRVLLALASIHKLVIHQMDVKTTFLNGELEEEIYMTQPEGCV 903

Query: 1237 VSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAKTRGSDSVLIC 1058
            V G + KVC+L +SLYGLKQAP QW+EK  N +L  GF  + ++ C+Y+++   + V+IC
Sbjct: 904  VLGQKEKVCKLLKSLYGLKQAPKQWHEKLDNVLLCEGFSTNDADKCVYSRSENGEYVIIC 963

Query: 1057 LYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQ 878
            LYVDDMLIFGTC DIV +TK++L S F+MKD+GEA VILG+K++R      LSQ  Y E+
Sbjct: 964  LYVDDMLIFGTCNDIVFKTKLFLGSKFEMKDMGEASVILGVKIIRKGDSILLSQEKYTEK 1023

Query: 877  VLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSR 698
            +L +F   D   V TPYD++  LKKN G+++SQ QYA+I+GS+++L + +RPDIAYAV R
Sbjct: 1024 LLKKFGYYDFKSVSTPYDANSKLKKNRGESISQTQYAQIIGSLLHLMSFSRPDIAYAVGR 1083

Query: 697  LSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSG 518
            LSR T  PS++HW+AL RLMKYL+GT D  + YS FP V+EGY DANW+SD D+  STSG
Sbjct: 1084 LSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAVLEGYSDANWISDSDETKSTSG 1143

Query: 517  FVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPIS 338
            +VFTLGGGAV+W+S +QT IA STMESEF+ALE+A  EA+WL+  LA+IPLG +    +S
Sbjct: 1144 YVFTLGGGAVTWRSARQTIIARSTMESEFVALEMAGSEAEWLKNFLANIPLGMKPTPSVS 1203

Query: 337  LHCDSQSAI 311
            +HCD QSAI
Sbjct: 1204 MHCDCQSAI 1212



 Score = 78.2 bits (191), Expect = 4e-11
 Identities = 32/66 (48%), Positives = 51/66 (77%)
 Frame = -2

Query: 306  VAKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAG 127
            +AKN  YNGK RHI+++H  V+++++ G IS+D+V++ER+LADP TKPL ++ + E   G
Sbjct: 1214 IAKNKSYNGKNRHIQLRHNLVKQLLKSGTISIDYVKSERDLADPLTKPLGRKMILETSRG 1273

Query: 126  IGMKNL 109
            +G+K L
Sbjct: 1274 MGLKPL 1279


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score = 1058 bits (2736), Expect(2) = 0.0
 Identities = 565/1277 (44%), Positives = 791/1277 (61%), Gaps = 15/1277 (1%)
 Frame = -1

Query: 4096 DLSKLEPLDGSNYKRWSQKLLIFFQQIEISYVLVQDXXXXXXXXXXXXXXXXXXXXXXXX 3917
            DL +L+  DGSN+ RW  K+      ++I Y+L                           
Sbjct: 12   DLVRLDRFDGSNFXRWQDKVRFLLTALKIFYIL-------DPTLXPLPEPKENDTPQVVA 64

Query: 3916 XXVKYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKW 3737
               K E+D L  RGHIL  ++D L+DL+ +   A+EIWE L+ KY  ++ G KK++  ++
Sbjct: 65   ARKKREEDELICRGHILNALSDRLYDLYTNTXSAREIWEALENKYKAEEEGTKKFLISQY 124

Query: 3736 MDFKLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKK 3557
            +DFK  ++KPL+ ++HE + +   +    +++ E  +   ++ KLP SW  YR  I HK 
Sbjct: 125  IDFKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHKS 184

Query: 3556 RDFTLKELISHMRTEEANRIKDKSSNLVNFSGANLVESGGASGSGKPHGFKKQKFNGKNP 3377
             D++L+E+  H+R EE +R +DK   +V  S     ++   S +  P G  K   N KN 
Sbjct: 185  EDYSLEEIQKHLRIEEESRSRDK---MVEESNGGTNKANAISKANHPRG--KNNNNKKNS 239

Query: 3376 -NYQADKKIVKP----KVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDA 3212
             NY + KK  +     K  C+ CG PGH + +C  R+                       
Sbjct: 240  GNYMSPKKNQEQFKGKKGPCFVCGKPGHYARECRFRKDQKG------------------- 280

Query: 3211 KAEKEGDGNDVIAAVTEANLVENK-NDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMG 3035
             A       ++IA +++  +V+ K   W  DT A+ H   ++SLF+ FEDA   + V MG
Sbjct: 281  -AVVNAIDEEIIATLSDVCVVQGKVQGWWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMG 339

Query: 3034 NXXXXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVM 2855
            N                         NV++VP M +NLVSG LL K G+K VFES ++++
Sbjct: 340  NEGKSKVLGKGTIEVVFTSGKKVTLKNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLIL 399

Query: 2854 TKSGDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES--LDVWHGRLGHVNYASIKKL 2681
            TKSG+FVGKGY CDG+  L+    I N+  S+SAY+ +S  L +WH RL HV  ++IK++
Sbjct: 400  TKSGNFVGKGYSCDGMIKLSTNDNI-NKMTSTSAYMCDSNSLXLWHNRLAHVGLSTIKRI 458

Query: 2680 RSMGLIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGG 2501
               GLI   C      KCE+CV++K  KKPF +V+ RS+ LL+L H+DL E  G+++RGG
Sbjct: 459  VKCGLIA--CDTKKFEKCEICVKSKMIKKPFHSVE-RSSNLLDLXHSDLCELNGMLTRGG 515

Query: 2500 KRYYISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLF 2321
             RY+++F+DD SR+T ++LL+ K E       +K EV+NQL   IK +RSDRG EY +  
Sbjct: 516  NRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLXKNIKVLRSDRGXEYFSSE 575

Query: 2320 LKDFCEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACY 2141
               FCE++GIIHE T PY+P  NGIAERKNRT   M   ML+ + L+ N+WGEA+L+AC+
Sbjct: 576  FNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNXMLLHAKLNFNLWGEALLTACH 635

Query: 2140 VLNRVPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYA 1961
            +LNR+P KK + +PYELWK   P +   KVWGCLA  +  DP +  +G +   C F+G A
Sbjct: 636  ILNRIPMKKKEISPYELWKGRKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFVGCA 695

Query: 1960 QNSAAYRFLTIGDKSICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASVEQSGQLSQEIE 1781
             NS AYR L +    I ESR+ EFFE++     +        TS   S E++   S+ +E
Sbjct: 696  SNSNAYRLLDLESNVIIESREVEFFENLLSDSNSQVP-----TSVGESQEETP--SKVVE 748

Query: 1780 IAVEPRRSKRQRTEKTYGTDFITA-----FVVE--HPDLIDDYVVSAFMICEDPVSYRAA 1622
              + PR+S+R R EK  G+D I +     ++VE    D+I    +    I EDP +Y+ A
Sbjct: 749  QPIVPRKSQRARKEKVLGSDEIDSQRISFYLVEGNREDIIRKIPI-VLQIEEDPKTYKEA 807

Query: 1621 MSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFKAR 1442
            M+S D  FWKEAI  E+DSI SN TW+LV+LP   KPI  KW+F++K   DG I  FKAR
Sbjct: 808  MASRDVAFWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKAR 867

Query: 1441 LVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIY 1262
            LV  G  Q++ +D+FDTY+PVAR ++IR L ALASIH+L VHQMDVKTAFLNGDL+EE+Y
Sbjct: 868  LVAKGFKQREGIDYFDTYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEVY 927

Query: 1261 IHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAKTR 1082
            + QPEG V+ G ENKVC+L +SLYGLKQAP QW+EKF + IL +GF  +  + CLY+KT 
Sbjct: 928  MEQPEGFVLLGNENKVCKLVKSLYGLKQAPKQWHEKFDHAILSDGFRHNNVDKCLYSKTC 987

Query: 1081 GSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGFGL 902
                V++CLYVDDMLI    +  ++ETK +LS TF MKDL E D ILGIK+ R +GG+ L
Sbjct: 988  DDYMVIVCLYVDDMLILSDDMXGIIETKRFLSXTFKMKDLXEVDTILGIKVKRNSGGYAL 1047

Query: 901  SQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCTRP 722
            +Q+HYIE+V+++F+   +    TP+DSSI L+KN+G +V+Q +YA  +GS+MY   CTR 
Sbjct: 1048 NQTHYIEKVVSKFSHLKIKDANTPFDSSIKLEKNBGRSVAQLEYASAIGSLMYAAQCTRA 1107

Query: 721  DIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDC 542
            DI++AVS+LSR+T  PS EHW A+ R++ YLK TK+L L YS+FP ++EGY DA+W+S  
Sbjct: 1108 DISFAVSKLSRFTSNPSVEHWKAIGRVLGYLKNTKELSLQYSKFPAIIEGYSDASWISSV 1167

Query: 541  DDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIPLG 362
             D  ST+G+VFTLGGGAVSW S KQTCI+ STME+EFIAL     EA+WLR+L+ DIP  
Sbjct: 1168 GDNLSTTGWVFTLGGGAVSWGSKKQTCISHSTMEAEFIALAATGKEAEWLRDLMMDIPFT 1227

Query: 361  KRSDAPISLHCDSQSAI 311
              + + +S+HCDSQ+ +
Sbjct: 1228 ANNVSTVSIHCDSQATL 1244



 Score = 68.2 bits (165), Expect(2) = 0.0
 Identities = 29/50 (58%), Positives = 40/50 (80%)
 Frame = -2

Query: 303  AKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVK 154
            A + VYNGK RHI ++H  VR++I++G+IS+ FVR+  NLADPFTKPL +
Sbjct: 1247 AYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTR 1296


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score = 1054 bits (2726), Expect(2) = 0.0
 Identities = 563/1280 (43%), Positives = 802/1280 (62%), Gaps = 16/1280 (1%)
 Frame = -1

Query: 4099 SDLSKLEPLDGSNYKRWSQKLLIFFQQIEISYVLVQDXXXXXXXXXXXXXXXXXXXXXXX 3920
            SD+ K E  DG+++KRW  K  ++   +++ +V+                          
Sbjct: 22   SDVIKPEAFDGASFKRWQIKTRMWLTDLKLFWVVTS-----AVPQAASDDSDDAAKAAAL 76

Query: 3919 XXXVKYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGK 3740
                K+++ N A    +L  +++ LFD++   + AK +W +L+ ++   D G + + T  
Sbjct: 77   AEKAKWDEANEACLSRLLNVLSNRLFDVYSAFTSAKGLWTDLENEFSEVDNGNESFTTEN 136

Query: 3739 WMDFKLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHK 3560
            ++++K++E + +M +L E + L   +V  G  + +  + N +L KLPPSW D+  + +H 
Sbjct: 137  YLNYKMVEGRSVMEQLQEIQLLVRDLVQYGCVLPDSFQVNAILAKLPPSWRDFVTSRRHM 196

Query: 3559 KRDFTLKELISHMRTEEANRIKDKSSNLVNFSGANLVESGGASGSGKPHGFKKQKFNG-- 3386
            K+  TL EL + +  EE  R  +K S  +    A++VE GG         F+K+K N   
Sbjct: 197  KKQMTLTELSAAINVEERARSSNKPSQQLQ---AHVVEKGG------DRKFQKKKKNSPQ 247

Query: 3385 KNPNYQADKKIVKPK-VTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAK 3209
            KN N    KK+ K +   CY CG  GH + +C  R+  G        PP Q         
Sbjct: 248  KNLNQPKSKKMKKKEDFICYVCGVSGHTARRCKLRKGKG--------PPPQ--------- 290

Query: 3208 AEKEGDG--NDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMG 3035
              KEG+   N       +A +    +DW +D+GA+ H C++RS+F +F+       V MG
Sbjct: 291  -RKEGNVVVNSTPGYALQAFMASPSDDWWMDSGATVHICADRSMFSSFQGFNSAP-VLMG 348

Query: 3034 NXXXXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVM 2855
            N                         +V++VPSM RNL+S  LL + GLKLVFES++VV+
Sbjct: 349  NGVPAAVRGTGQVYLKLTSGKTLVLKDVLYVPSMSRNLISVSLLCRQGLKLVFESNKVVL 408

Query: 2854 TKSGDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIESLD----VWHGRLGHVNYASIK 2687
            +K G FVGK Y   GLF L+V    +N ++S    ++ + D    +WH RL HVN+ +IK
Sbjct: 409  SKFGTFVGKSYESGGLFRLSV----LNNHSSYHVNVVCNNDSINNIWHSRLCHVNFEAIK 464

Query: 2686 KLRSMGLIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISR 2507
            +L  M LIP   +  G  KC +CV+AK  +KPF  V+ RST  LELIH+D+ E  G+I +
Sbjct: 465  RLSDMSLIPEYKHVKG-VKCGICVQAKQPRKPFHTVEGRSTTPLELIHSDICEMNGIIIK 523

Query: 2506 GGKRYYISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYST 2327
            GGKRY+++ +DD +R+  +YLLRTKDEA E    +KTEV+NQL+ KIKR+RSDRGGEY +
Sbjct: 524  GGKRYFLTLIDDATRFCYIYLLRTKDEALEHFKIYKTEVENQLDKKIKRLRSDRGGEYLS 583

Query: 2326 LFLKDFCEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSA 2147
                ++C++ GIIHE T PYSP  NG+AERKNRT+ ++  A+L SSG+ +  WGEAVL+ 
Sbjct: 584  NLFDEYCKECGIIHETTAPYSPQSNGVAERKNRTVCDLANALLQSSGMPDIWWGEAVLTV 643

Query: 2146 CYVLNRVPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIG 1967
            CYVLNRVP +  + TPYE +K   P L  L+ WGCLAKV +  PK+  +G KT DCVF+G
Sbjct: 644  CYVLNRVPPRNREATPYEGFKGRKPDLSHLRTWGCLAKVNVPLPKKRKLGPKTVDCVFLG 703

Query: 1966 YAQNSAAYRFLTIGDKS-------ICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASVEQ 1808
            YA NSAAYRFL +  ++       I ESRD  FFE IFPM+          +   +    
Sbjct: 704  YAHNSAAYRFLVVHSETSEIAVNVIMESRDVTFFESIFPMRDKEVVAPDGPSRTYSLPSS 763

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
                + ++E+    RRSKRQRTEK+ G               DDY++  +++ E+P S  
Sbjct: 764  VNDQTPDLEL----RRSKRQRTEKSLG---------------DDYII--YLVDEEPRSLT 802

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +W+EA+ SE+DSI SN TW++ +LPA CKP+  KWIF++K +PDG+I+++K
Sbjct: 803  EAYTSPDAEYWREAVLSEMDSIISNGTWEITDLPAGCKPVGCKWIFRRKRRPDGTIEKYK 862

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QKK+ D+FDTYSPVAR+ TIR L+ALA+ + L+VHQMDVKTAFLNG+L+EE
Sbjct: 863  ARLVAKGFTQKKEEDYFDTYSPVARLPTIRVLLALAAAYKLLVHQMDVKTAFLNGELEEE 922

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QPEG VV G E+KVCRL +SLYGLKQAP QW+EKF+NT+   GF V+ ++ C+Y +
Sbjct: 923  IYMQQPEGFVVKGQESKVCRLIKSLYGLKQAPRQWHEKFNNTLTTAGFCVNEADKCVYYR 982

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G   V++CLYVDD+LIFGT L+ ++ETK++LS  FDMKDLGEADVIL IKL++   G 
Sbjct: 983  FSGGKGVIMCLYVDDILIFGTDLEAIMETKLFLSKNFDMKDLGEADVILNIKLIKGEDGI 1042

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             LSQSHY+E+V+ RF   D  PV TPYD S  L K  G+ V+Q  Y++I+GS+MYL++ T
Sbjct: 1043 TLSQSHYVEKVMTRFGHMDCKPVTTPYDPSYTLSKYEGEPVNQLLYSQIIGSLMYLSSAT 1102

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI+YAV RL+RY+  P   HW ALYR+++YLKG  +L + Y+ FP V+EG+ DANW+S
Sbjct: 1103 RPDISYAVCRLARYSASPGDRHWVALYRVLRYLKGAMNLGIKYTGFPSVLEGFSDANWIS 1162

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D + STSG+VFTL GGAVSW+S KQ+    ST E+E +AL+ A+ EA+WLR+LL+D+P
Sbjct: 1163 DSDQMKSTSGYVFTLAGGAVSWRSSKQSVSTRSTKEAELVALDSAALEAEWLRDLLSDLP 1222

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            +  +    + ++CD+ S +L
Sbjct: 1223 MLAKPIPAVLVYCDNTSVLL 1242



 Score = 52.0 bits (123), Expect(2) = 0.0
 Identities = 23/52 (44%), Positives = 36/52 (69%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGM 118
            RHIR +    R   E GVI++D++++ERNLADPFTK L ++ ++    G+G+
Sbjct: 1255 RHIRRRLDSCRHARETGVITVDYIKSERNLADPFTKGLAQKPIQAACMGMGL 1306


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score = 1033 bits (2670), Expect(2) = 0.0
 Identities = 542/1220 (44%), Positives = 779/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+          K P        +   
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTI 276

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N WV DTGA+ H C++ SLF +++  A G  V MGN  
Sbjct: 277  GNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP      G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LIPKFSIVKG-SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD +R+  +YLL+TKDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 513  MTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P+L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G V+ G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 916  IYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTFAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G + V++CLYVDD+LIFGT ++++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1216 VVEKPVPAILMNCDNQTVIV 1235



 Score = 50.4 bits (119), Expect(2) = 0.0
 Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = -2

Query: 297  NSVYNGKK-RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIG 121
            NS  N K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G
Sbjct: 1239 NSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMG 1298

Query: 120  MKNLYGES 97
            ++ +  ++
Sbjct: 1299 LRPISNDA 1306


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score = 1033 bits (2672), Expect(2) = 0.0
 Identities = 544/1220 (44%), Positives = 781/1220 (64%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ A E+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDANELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLP SW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPSSWRSFGTALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSS-NLVNFSGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S +    S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKDDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +CSQR+          K P        +   
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCSQRKGM--------KAPAGQTSKSANVTI 276

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N WV DTGA+ H C++ SLF +++  A G  V MGN  
Sbjct: 277  GNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP      G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LIPKFSIVKG-SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++F+DD +R+  +YLL+TKDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 513  MTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIA+RKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAKRKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P+L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKHKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G VV G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 916  IYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G + V++CLYVDD+LIFGT L+++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L L Y+R+P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1216 VVEKLVPAILMNCDNQTVIV 1235



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1248 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score = 1033 bits (2670), Expect(2) = 0.0
 Identities = 543/1220 (44%), Positives = 779/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+          K P        +   
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTI 276

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N WV DTGA+ H C++ SLF +++  A G  V MGN  
Sbjct: 277  GNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP      G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LIPKFSIVKG-SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD +R+  +YLL+TKDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 513  MTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P+L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G V+ G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 916  IYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G + V++CLYVDD+LIFGT L+++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1216 VVEKPVPAILMNCDNQTVIV 1235



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1248 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score = 1032 bits (2668), Expect(2) = 0.0
 Identities = 542/1220 (44%), Positives = 779/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+          K P        +   
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTI 276

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N WV DTGA+ H C++ SLF +++  A G  V MGN  
Sbjct: 277  GNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP      G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LIPKFSIVKG-SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD +R+  +YLL+TKDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 513  MTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P+L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G V+ G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 916  IYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G + V++CLYVDD+LIFGT ++++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1216 VVEKPVPAILMNCDNQTVIV 1235



 Score = 50.1 bits (118), Expect(2) = 0.0
 Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = -2

Query: 297  NSVYNGKK-RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIG 121
            NS  N K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G
Sbjct: 1239 NSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMG 1298

Query: 120  MK 115
            ++
Sbjct: 1299 LR 1300


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score = 1030 bits (2664), Expect(2) = 0.0
 Identities = 543/1220 (44%), Positives = 777/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+          K P        +   
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTI 276

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N WV DTGA+ H C++ SLF +++  A G  V MGN  
Sbjct: 277  GNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP        +KC  CV++K  +KP KA K R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LIPKFSIVKS-SKCHSCVQSKQPRKPHKAAKERNLAPLELLHSDLCEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD +R+  +YLL+TKDEA +    +K E++NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 513  MTLIDDATRFCYVYLLKTKDEALDYFKIYKAEIENQLDRKIKRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P+L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPSEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEAI SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAICSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G VV G E KVC+L +SLYGLKQAP QW+EKF  T++  GF V+ ++ C+Y +
Sbjct: 916  IYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLISAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G + V++CLYVDD+LIFGT L+++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L   Y+ +P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGFHYTGYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1216 VVEKPVPAILMNCDNQTVIV 1235



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1248 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score = 1030 bits (2663), Expect(2) = 0.0
 Identities = 543/1220 (44%), Positives = 777/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+  G K P        +  A      
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCPQRK--GMKAP----AGQTSKSANVTIGN 278

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
              +G G   + +V   N   N   W +DTGA+ H C++ SLF +++  A G  V MGN  
Sbjct: 279  TGDGSGYGNLPSVFSVNQSTN---WWVDTGANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP      G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LIPKFSIVKG-SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD +R+  +YLL+TKDEA +    +K EV+NQL+ +I R+RSDRGGE+ +     F
Sbjct: 513  MTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRRINRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ YVLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNYVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P+L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G VV G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 916  IYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G + V++CLYVDD+LIFGT L+++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW  L R+M+YLKGT +L L Y+ +P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRVLERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1216 VVEKPVPAILMNCDNQTVIV 1235



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1248 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score = 1029 bits (2661), Expect(2) = 0.0
 Identities = 543/1220 (44%), Positives = 777/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 269  QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 328

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 329  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 388

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 389  SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 448

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+          K P        +   
Sbjct: 449  NNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTI 492

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N WV DT A+ H C++ SLF +++  A G  V MGN  
Sbjct: 493  GNTGDGSGYGNLPTVFSVNQSTNWWV-DTRANVHVCADISLFSSYQ-VARGSTVLMGNGS 550

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 551  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 610

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 611  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMC 669

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP      G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 670  LIPKFSIVKG-SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF 728

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD +R+  +YLL+TKDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 729  MTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLF 788

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 789  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 848

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 849  VPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 908

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 909  AYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 968

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 969  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 1011

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 1012 EAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 1071

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 1072 ARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 1131

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G VV G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 1132 IYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYR 1191

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G + V++CLYVDD+LIFGT L+++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 1192 HGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1251

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1252 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASAT 1311

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+S
Sbjct: 1312 RPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1371

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1372 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1431

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1432 VVEKPVPAILMNCDNQTVIV 1451



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1464 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1516


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score = 1029 bits (2661), Expect(2) = 0.0
 Identities = 543/1220 (44%), Positives = 777/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+          K P        +   
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTI 276

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N WV DT A+ H C++ SLF +++  A G  V MGN  
Sbjct: 277  GNTGDGSGYGNLPTVFSVNQSTNWWV-DTRANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP      G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LIPKFSIVKG-SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD +R+  +YLL+TKDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 513  MTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G VV G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 916  IYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G + V++CLYVDD+LIFGT L+++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1216 VVEKPVPAILMNCDNQTVIV 1235



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1248 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score = 1029 bits (2660), Expect(2) = 0.0
 Identities = 539/1202 (44%), Positives = 770/1202 (64%), Gaps = 20/1202 (1%)
 Frame = -1

Query: 3853 DTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDFKLMEDKPLMSKLHEYENL 3674
            D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+K+ +++ ++ + HE + +
Sbjct: 160  DRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVVEQAHEIQTM 219

Query: 3673 AAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDFTLKELISHMRTEEANRIK 3494
            A  +      + +   A  ++ KLPPSW  +   +KHK+++++++ LI+ +  EE  R K
Sbjct: 220  AKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREK 279

Query: 3493 DKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNGKNPNYQADKKIVKPKVTC 3332
            D +S      S AN+V        GK        FKKQK N  NPN        + + TC
Sbjct: 280  DAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPN--------QDERTC 331

Query: 3331 YTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKAEKEGDGNDVIAAVTEANL 3152
            + CG  GH + +C QR+          K P        +      GDG+      T  ++
Sbjct: 332  FVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSV 383

Query: 3151 VENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXXXXXXXXXXXXXXXXXXXX 2972
             ++ N WV DTGA+ H C++ SLF +++  A G  V MGN                    
Sbjct: 384  NQSTNWWV-DTGANVHVCADISLFSSYQ-VARGSTVLMGNGSHASVHGVGTVDLKFTSGK 441

Query: 2971 XXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKSGDFVGKGYLCDGLFVLNV 2792
                 NV  VPS+ RNLVSG  L + G KLVFES++VV++K G F+GKGY C GLF  ++
Sbjct: 442  IVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSL 501

Query: 2791 ESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMGLIPNLCYKGGDAKCEVCV 2615
             S+  N++ +     ++   +VWH RL H+N+  + +L SM LIP      G +KC  CV
Sbjct: 502  -SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKG-SKCHSCV 559

Query: 2614 EAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYYISFVDDFSRYTRLYLLRT 2435
            ++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+++ +DD +R+  +YLL+T
Sbjct: 560  QSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKT 619

Query: 2434 KDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDFCEKHGIIHEFTVPYSP*Q 2255
            KDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     FCE+HGIIHE T PYSP  
Sbjct: 620  KDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPES 679

Query: 2254 NGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNRVPHKKLDKTPYELWKSFP 2075
            NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR+P++  DKTPYE+W    
Sbjct: 680  NGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRIPNRNKDKTPYEIWIGRK 739

Query: 2074 PTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSAAYRFLTIGDK-------S 1916
            P+L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S AYRFL +  +       +
Sbjct: 740  PSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGT 799

Query: 1915 ICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQSGQLSQEIEIAVEPRRSK 1754
            I ESRDA FFE  FPMK         S    +S+      E + +L  E +++  PRRSK
Sbjct: 800  IMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSK 859

Query: 1753 RQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDTPFWKEAIQSE 1574
            RQRT K++G DF                 + +++ + P S   A +S D  +WKEA++SE
Sbjct: 860  RQRTAKSFGDDF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSE 902

Query: 1573 IDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFKARLVVVGCSQKKDVDFFD 1394
            +DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFD
Sbjct: 903  MDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFD 962

Query: 1393 TYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKV 1214
            TYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KV
Sbjct: 963  TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 1022

Query: 1213 CRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAKTRGSDSVLICLYVDDMLI 1034
            C+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +  G + V++CLYVDD+LI
Sbjct: 1023 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILI 1082

Query: 1033 FGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCS 854
            FGT L+++ E K +LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   
Sbjct: 1083 FGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1142

Query: 853  DLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKP 674
            D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P
Sbjct: 1143 DSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1202

Query: 673  SKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGG 494
              +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGG
Sbjct: 1203 GDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1262

Query: 493  AVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSA 314
            AVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ 
Sbjct: 1263 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1322

Query: 313  IL 308
            I+
Sbjct: 1323 IV 1324



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1337 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1389


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score = 1028 bits (2657), Expect(2) = 0.0
 Identities = 543/1229 (44%), Positives = 769/1229 (62%), Gaps = 30/1229 (2%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            +Y+  N    G +L+ + D L D  +  +  K++W+ L  KYG  DAG   Y+   + D+
Sbjct: 22   EYDHANTMFTGAVLSALVDRLVDANMQYTDGKQLWDALTTKYGASDAGSDLYIMESFHDY 81

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+++++ ++ + HE + +A  +    + + +   A  ++ KLP +W ++   +KHK+++ 
Sbjct: 82   KMVDNRSIVEQAHEIQCIAKELDHLKIVLPDRFVAGCIIAKLPSTWRNFATALKHKRQEI 141

Query: 3547 TLKELISHMRTEEANRIKDKSSNL-VNFSGANLVESGGASGSGKPHGFKKQKFNGKNPNY 3371
            +++ LI+ +  EE  R KD  S      S AN+V+     G GKP      K N  N   
Sbjct: 142  SVENLIASLDVEEKARAKDTGSKGGEGHSSANMVQKNHNKGKGKP------KSNKPNKTT 195

Query: 3370 QADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKAEKEGD 3191
               KK  K ++TC+ CG  GH +  C  R                        +  K+G+
Sbjct: 196  NFKKKKNKAELTCFACGEAGHFAKDCPDRAD----------------------RRGKKGN 233

Query: 3190 GNDVIAAVTE----ANL-----VENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYM 3038
             N VIA+  E     NL     V     W LDTGA+ H CS+ +LF +++ A +   V M
Sbjct: 234  VNTVIASNEEDKGYGNLPFIFSVFQSPSWWLDTGANVHVCSDINLFSSYQGARDSS-VLM 292

Query: 3037 GNXXXXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVV 2858
            GN                         NV  VPS+ +NLVSG LL + G K+V ES+++V
Sbjct: 293  GNGSHASVHGTGTVDLKFTSGKIVQLKNVHHVPSIHKNLVSGTLLCRDGFKVVLESNKLV 352

Query: 2857 MTKSGDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIESLD----VWHGRLGHVNYASI 2690
            ++KSG F+GKGY C GLF  +    +++ N  S  ++  ++D    +WH RL H+N+ S+
Sbjct: 353  VSKSGQFIGKGYDCGGLFRFS----LLDFNNKSVNHICANVDDLASIWHSRLCHINFGSM 408

Query: 2689 KKLRSMGLIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVIS 2510
             +L +M LIPN+    G +KC  CV++K  +KP KA + R    LELIH+DL E  GV++
Sbjct: 409  SRLATMSLIPNITIVKG-SKCHSCVQSKQPRKPHKAAEERHLAPLELIHSDLCEMNGVLT 467

Query: 2509 RGGKRYYISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYS 2330
            +GGKRY+++ +DD SR+  +YLL+TKDEA +    +K EV+NQL  KIKR+RSDRGGE+ 
Sbjct: 468  KGGKRYFMTLIDDASRFCYVYLLKTKDEALDYFKIYKAEVENQLERKIKRLRSDRGGEFF 527

Query: 2329 TLFLKDFCEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLS 2150
                 DFC +HGIIHE T PYSP  NGIAERKNRTL ++  AML + GLS+  WGEAVL+
Sbjct: 528  PKVFDDFCAEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTCGLSKAWWGEAVLT 587

Query: 2149 ACYVLNRVPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFI 1970
            +C+VLNR+P  K +KTPYE W    P+L  L+ WGC+AKV +   K+  +G +T DCVF+
Sbjct: 588  SCHVLNRIPMGKEEKTPYEKWVGRKPSLSYLRTWGCMAKVNVPINKKRKLGPRTVDCVFL 647

Query: 1969 GYAQNSAAYRFLTIGDK-------SICESRDAEFFEHIFPMK---TNXXXXXXXSTSGNA 1820
            GYA  S AYRFL +  +       +I ESRDA FFEHIFPMK   +N           N 
Sbjct: 648  GYASCSIAYRFLVVKSEVPDVYVDTIMESRDATFFEHIFPMKDIHSNSRYSSEIIPEHNT 707

Query: 1819 SVEQSGQLSQEIEIAVE------PRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAF 1658
             +E      Q  EI +E      P+RSKRQR EK++G DFI                  +
Sbjct: 708  PIES---FEQPHEIVLEEDDNDAPKRSKRQRVEKSFGDDFIV-----------------Y 747

Query: 1657 MICEDPVSYRAAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKL 1478
            ++ + P +   A +S D   WKEA+ +E+DSI SN TW++ + P  CKP+  KW+FKKKL
Sbjct: 748  LVDDTPTTIAEAFASSDADDWKEAVHNEMDSILSNGTWEITDRPYGCKPVGCKWVFKKKL 807

Query: 1477 KPDGSIDRFKARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKT 1298
            KPDG+I+++KARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ + L+VHQMDVKT
Sbjct: 808  KPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARMTTIRVLLSLAASYGLLVHQMDVKT 867

Query: 1297 AFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVV 1118
            AFLNG+LDEEIY+ QP+G VV G E+KVC+L +SLYGLKQAP QW+EKF  T+   GF +
Sbjct: 868  AFLNGELDEEIYMEQPDGFVVKGQESKVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFAI 927

Query: 1117 SGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILG 938
            + ++ C+Y +  G + V++CLYVDD+LIFGT +D++ E K +LS +FDMKDLGEADVIL 
Sbjct: 928  NEADRCVYYRCGGGEGVILCLYVDDILIFGTNIDVINEVKSFLSKSFDMKDLGEADVILN 987

Query: 937  IKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARIL 758
            IKL++ +GG  LSQSHY+E+VL RF  S+  P  TPYD S+ L+KN    + Q +Y++I+
Sbjct: 988  IKLIKADGGITLSQSHYVEKVLKRFGFSECKPSPTPYDPSVTLRKNKRIGLDQLRYSQIV 1047

Query: 757  GSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVM 578
            GS+MYL   TRPDI++AVS+LSR+   P  +HW AL R+M+YL+GT    + YS    V+
Sbjct: 1048 GSLMYLAGATRPDISFAVSKLSRFMSNPGTDHWHALERVMRYLQGTMSYGIHYSGQHAVL 1107

Query: 577  EGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAK 398
            EGY D+NW+SD D++ +TSG+VFT+GGGAVSW+S KQT +  STME+E  AL+ A+ EA+
Sbjct: 1108 EGYSDSNWISDADELYATSGYVFTIGGGAVSWRSCKQTILTRSTMEAELAALDTATVEAE 1167

Query: 397  WLRELLADIPLGKRSDAPISLHCDSQSAI 311
            WLRELL D+P+ ++    I ++CD+Q+ I
Sbjct: 1168 WLRELLMDLPVVEKPIPAILMNCDNQTVI 1196



 Score = 49.3 bits (116), Expect(2) = 0.0
 Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -2

Query: 285  NGKK-RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            NGK  RH++ +   VR++   GVIS+ ++ T++NLADPFTK L +  +E     +GM+
Sbjct: 1205 NGKSSRHVKRRLKSVRKLRNSGVISVTYISTDKNLADPFTKGLPRNVIEIASREMGMR 1262


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score = 1026 bits (2654), Expect(2) = 0.0
 Identities = 541/1220 (44%), Positives = 777/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+          K P        +   
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTI 276

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N W +D GA+ H C++ SLF +++  A G  V MGN  
Sbjct: 277  GNTGDGSGYGNLPTVFSVNQSTN-WRVDIGANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LI       G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LISKFYIVKG-SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD +R+  +YLL+TKDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 513  MTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P+L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSPVAR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G VV G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 916  IYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G + V++CLYVDD+LIFGT L+++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1216 VVEKPVPAILMNCDNQTVIV 1235



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1248 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score = 1025 bits (2649), Expect(2) = 0.0
 Identities = 540/1220 (44%), Positives = 776/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKSDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+          K P        +   
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTI 276

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N WV DTGA+ H C++ SLF +++  A G  V MGN  
Sbjct: 277  GNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGLGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VW+ RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWYSRLCHINFGLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP      G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LIPKFSIVKG-SKCHSCVQSKQPRKPHKAAEKRNLAPLELLHSDLYEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD + +  +YLL+ KDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 513  MTLIDDATTFCYVYLLKMKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    P+L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRFL +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFLIVKSEVLDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N  W++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAVRSEMDSIIANGIWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYSP+AR++TIR L++LA+ H L+VHQMDVKTAFLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSPIARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY+ QP+G VV G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 916  IYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
              G   V++CLYVDD+LIFGT L+++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGGGKGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KNN  A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNNRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRALERIMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++    I ++CD+Q+ I+
Sbjct: 1216 VVEKPVPAILMNCDNQTVIV 1235



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1248 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score = 1027 bits (2656), Expect(2) = 0.0
 Identities = 552/1284 (42%), Positives = 786/1284 (61%), Gaps = 24/1284 (1%)
 Frame = -1

Query: 4087 KLEPLDGSNYKRWSQKLLIFFQQIEISYVLVQDXXXXXXXXXXXXXXXXXXXXXXXXXXV 3908
            K    DGSNYKRW  + L++   ++  YV                               
Sbjct: 123  KPHAFDGSNYKRWKARALLWLTAMQCFYV---------------SRGKRSEPPLSPEEEA 167

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            K+E  +   RG +++ + D + D+++ +   K++W+ L+AK+G  DAG + YV  ++ D+
Sbjct: 168  KFEASDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDY 227

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+++D+ ++ + HE + LA  +     ++ +   A  ++ KLPPSW D+  ++KHK+++F
Sbjct: 228  KMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEF 287

Query: 3547 TLKELISHMRTEEANRIKD-KSSNLVNFSGANLVESGGASGSGKPHGFKKQKFNGKNPNY 3371
            ++ +LI  +  EE  R KD +   +   S AN+V+      S   H  KK K + K    
Sbjct: 288  SVPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHAS---HNNKKVKPDVKPKAA 344

Query: 3370 QADKKIVKPKVT--CYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKAEKE 3197
               KK  K K    C+ CG  GH +  C +R           K    AN+  +      E
Sbjct: 345  TNFKKKSKGKAKGDCFVCGKSGHWAKDCPER-----------KDRKSANMIIS------E 387

Query: 3196 GDGNDVIAAVTEANL-VENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXXXX 3020
            G G      +    L V +  DW +DTGA+ H C++ SLF +++    G  + MGN    
Sbjct: 388  GGGTSGYGKILPRVLSVFHSPDWWVDTGANIHVCADISLFSSYQ-VGRGSSLLMGNGSLA 446

Query: 3019 XXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKSGD 2840
                                 NV  VPS+++NLVSG LL + G +LVFES++ V++K G 
Sbjct: 447  AVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGT 506

Query: 2839 FVGKGYLCDGLFVLNVESEIMNENASSSAYLIESLDVWHGRLGHVNYASIKKLRSMGLIP 2660
            FVGKGY   GLF  ++     N N  +     +  +VWH RL HVN+  + +L +M LIP
Sbjct: 507  FVGKGYDSGGLFRFSLNDMCNNHNVVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIP 566

Query: 2659 NLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYYISF 2480
                  G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGK+Y+++ 
Sbjct: 567  KFTLVKG-SKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTL 625

Query: 2479 VDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDFCEK 2300
            +DD +R+  +YLL+TKDEA      +K EV+NQL  KIKR+RSDRGGEY +     FCE+
Sbjct: 626  IDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEE 685

Query: 2299 HGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNRVPH 2120
             GIIHE T PYSP  NG+AERKNRTL  M  AML ++GLS+  WGE VL+AC+VLN++P 
Sbjct: 686  FGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGETVLTACHVLNKIPM 745

Query: 2119 KKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSAAYR 1940
            K  + TP+E W+     L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S  YR
Sbjct: 746  KHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYR 805

Query: 1939 FLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV----------- 1814
            FL +          +I ESRDA FFE+ FPMK          TS   +V           
Sbjct: 806  FLIVNSGVPDMHVGTILESRDATFFENEFPMKYTPS------TSSKETVMPHEHFTPIEH 859

Query: 1813 -EQSGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPV 1637
             +Q+ + + E +  V+ R+SKRQR  K++G               DDY+V  +++ + P 
Sbjct: 860  NDQTPEENPEEDNIVDTRKSKRQRVVKSFG---------------DDYIV--YLVDDTPR 902

Query: 1636 SYRAAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSID 1457
            +   A SS D  +WKEA++SE+DSI SN TW++V  P  CKP+  KW+FKKKL+PDG+I+
Sbjct: 903  TIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEIVERPYGCKPVGCKWVFKKKLRPDGTIE 962

Query: 1456 RFKARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDL 1277
            ++KARLV  G +QK+  DFFDTYSPVAR++TIR L+ALA+ H L+VHQMDVKTAFLNG+L
Sbjct: 963  KYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGEL 1022

Query: 1276 DEEIYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCL 1097
            +EEIY+ QP+G V+ G E  VC+L +SLYGLKQAP QW+EKF  T+   GFVV+ ++ C+
Sbjct: 1023 EEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCV 1082

Query: 1096 YAKTRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVR-T 920
            Y +  G + V++CLYVDD+LIFGT L+++ E K YLS +F+MKDLGEADVIL IKL R  
Sbjct: 1083 YYRYGGGEGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGD 1142

Query: 919  NGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYL 740
             GG  L QSHY+++VL+RF  SD  P  TPYD S+ L+KN   A  Q +Y++I+GS+MYL
Sbjct: 1143 EGGITLVQSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYL 1202

Query: 739  TNCTRPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDA 560
             + TRPDI++AVS+LSR+   P  +HW AL R+M+YLKGT    + Y+ +P+V+EGY D+
Sbjct: 1203 ASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDS 1262

Query: 559  NWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELL 380
            NW+SD D++ +TSG+VFTLGGGAVSWKS KQT +  STME+E  AL+ A  EA+WLRELL
Sbjct: 1263 NWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALDTAIVEAEWLRELL 1322

Query: 379  ADIPLGKRSDAPISLHCDSQSAIL 308
             D+P+ ++    I ++CD+Q+ I+
Sbjct: 1323 MDLPVVEKPVPAILMNCDNQTVII 1346



 Score = 45.8 bits (107), Expect(2) = 0.0
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGM 118
            RHI+ +   VR+    GVI+LD+V+T RNLAD FTK L +  ++     +G+
Sbjct: 1359 RHIKRRLKSVRKQKNSGVIALDYVQTARNLADQFTKGLPRNVIDSASREMGL 1410


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score = 1027 bits (2656), Expect(2) = 0.0
 Identities = 552/1284 (42%), Positives = 786/1284 (61%), Gaps = 24/1284 (1%)
 Frame = -1

Query: 4087 KLEPLDGSNYKRWSQKLLIFFQQIEISYVLVQDXXXXXXXXXXXXXXXXXXXXXXXXXXV 3908
            K    DGSNYKRW  + L++   ++  YV                               
Sbjct: 104  KPHAFDGSNYKRWKARALLWLTAMQCFYV---------------SRGKRSEPPLSPEEEA 148

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            K+E  +   RG +++ + D + D+++ +   K++W+ L+AK+G  DAG + YV  ++ D+
Sbjct: 149  KFEASDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGISDAGSELYVMEQFYDY 208

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+++D+ ++ + HE + LA  +     ++ +   A  ++ KLPPSW D+  ++KHK+++F
Sbjct: 209  KMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGDIIAKLPPSWSDFATSLKHKRQEF 268

Query: 3547 TLKELISHMRTEEANRIKD-KSSNLVNFSGANLVESGGASGSGKPHGFKKQKFNGKNPNY 3371
            ++ +LI  +  EE  R KD +   +   S AN+V+      S   H  KK K + K    
Sbjct: 269  SVPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHAS---HNNKKVKPDVKPKAA 325

Query: 3370 QADKKIVKPKVT--CYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKAEKE 3197
               KK  K K    C+ CG  GH +  C +R           K    AN+  +      E
Sbjct: 326  TNFKKKSKGKAKGDCFVCGKSGHWAKDCPER-----------KDRKSANMIIS------E 368

Query: 3196 GDGNDVIAAVTEANL-VENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXXXX 3020
            G G      +    L V +  DW +DTGA+ H C++ SLF +++    G  + MGN    
Sbjct: 369  GGGTSGYGKILPRVLSVFHSPDWWVDTGANIHVCADISLFSSYQ-VGRGSSLLMGNGSLA 427

Query: 3019 XXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKSGD 2840
                                 NV  VPS+++NLVSG LL + G +LVFES++ V++K G 
Sbjct: 428  AVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGT 487

Query: 2839 FVGKGYLCDGLFVLNVESEIMNENASSSAYLIESLDVWHGRLGHVNYASIKKLRSMGLIP 2660
            FVGKGY   GLF  ++     N N  +     +  +VWH RL HVN+  + +L +M LIP
Sbjct: 488  FVGKGYDSGGLFRFSLNDMCNNHNVVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIP 547

Query: 2659 NLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYYISF 2480
                  G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGK+Y+++ 
Sbjct: 548  KFTLVKG-SKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTL 606

Query: 2479 VDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDFCEK 2300
            +DD +R+  +YLL+TKDEA      +K EV+NQL  KIKR+RSDRGGEY +     FCE+
Sbjct: 607  IDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEE 666

Query: 2299 HGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNRVPH 2120
             GIIHE T PYSP  NG+AERKNRTL  M  AML ++GLS+  WGE VL+AC+VLN++P 
Sbjct: 667  FGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGETVLTACHVLNKIPM 726

Query: 2119 KKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSAAYR 1940
            K  + TP+E W+     L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S  YR
Sbjct: 727  KHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYR 786

Query: 1939 FLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV----------- 1814
            FL +          +I ESRDA FFE+ FPMK          TS   +V           
Sbjct: 787  FLIVNSGVPDMHVGTILESRDATFFENEFPMKYTPS------TSSKETVMPHEHFTPIEH 840

Query: 1813 -EQSGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPV 1637
             +Q+ + + E +  V+ R+SKRQR  K++G               DDY+V  +++ + P 
Sbjct: 841  NDQTPEENPEEDNIVDTRKSKRQRVVKSFG---------------DDYIV--YLVDDTPR 883

Query: 1636 SYRAAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSID 1457
            +   A SS D  +WKEA++SE+DSI SN TW++V  P  CKP+  KW+FKKKL+PDG+I+
Sbjct: 884  TIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEIVERPYGCKPVGCKWVFKKKLRPDGTIE 943

Query: 1456 RFKARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDL 1277
            ++KARLV  G +QK+  DFFDTYSPVAR++TIR L+ALA+ H L+VHQMDVKTAFLNG+L
Sbjct: 944  KYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGEL 1003

Query: 1276 DEEIYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCL 1097
            +EEIY+ QP+G V+ G E  VC+L +SLYGLKQAP QW+EKF  T+   GFVV+ ++ C+
Sbjct: 1004 EEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCV 1063

Query: 1096 YAKTRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVR-T 920
            Y +  G + V++CLYVDD+LIFGT L+++ E K YLS +F+MKDLGEADVIL IKL R  
Sbjct: 1064 YYRYGGGEGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGD 1123

Query: 919  NGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYL 740
             GG  L QSHY+++VL+RF  SD  P  TPYD S+ L+KN   A  Q +Y++I+GS+MYL
Sbjct: 1124 EGGITLVQSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYL 1183

Query: 739  TNCTRPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDA 560
             + TRPDI++AVS+LSR+   P  +HW AL R+M+YLKGT    + Y+ +P+V+EGY D+
Sbjct: 1184 ASATRPDISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDS 1243

Query: 559  NWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELL 380
            NW+SD D++ +TSG+VFTLGGGAVSWKS KQT +  STME+E  AL+ A  EA+WLRELL
Sbjct: 1244 NWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALDTAIVEAEWLRELL 1303

Query: 379  ADIPLGKRSDAPISLHCDSQSAIL 308
             D+P+ ++    I ++CD+Q+ I+
Sbjct: 1304 MDLPVVEKPVPAILMNCDNQTVII 1327



 Score = 45.8 bits (107), Expect(2) = 0.0
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGM 118
            RHI+ +   VR+    GVI+LD+V+T RNLAD FTK L +  ++     +G+
Sbjct: 1340 RHIKRRLKSVRKQKNSGVIALDYVQTARNLADQFTKGLPRNVIDSASREMGL 1391


>gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1302

 Score = 1022 bits (2642), Expect(2) = 0.0
 Identities = 540/1220 (44%), Positives = 776/1220 (63%), Gaps = 20/1220 (1%)
 Frame = -1

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            ++E+      G IL+ + D L ++++ ++ AKE+W+ L  K+G  DA    Y+  ++ D+
Sbjct: 53   QFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDY 112

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+ +++ ++ + HE + +A  +      + +   A  ++ KLPPSW  +   +KHK++++
Sbjct: 113  KMADNRSVVEQAHEIKTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGAALKHKRQEY 172

Query: 3547 TLKELISHMRTEEANRIKDKSSNLVNF-SGANLVESGGASGSGK-----PHGFKKQKFNG 3386
            +++ LI+ +  EE  R KD +S      S AN+V        GK        FKKQK N 
Sbjct: 173  SVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNN 232

Query: 3385 KNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKA 3206
             NPN        + + TC+ CG  GH + +C QR+          K P        +   
Sbjct: 233  NNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQTSKSANVTI 276

Query: 3205 EKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXX 3026
               GDG+      T  ++ ++ N WV DTGA+ H C++ SLF +++  A G  V MGN  
Sbjct: 277  GNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGSTVLMGNGS 334

Query: 3025 XXXXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKS 2846
                                   NV  VPS+ RNLVSG  L + G KLVFES++VV++K 
Sbjct: 335  HASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKH 394

Query: 2845 GDFVGKGYLCDGLFVLNVESEIMNENASSSAYLIES-LDVWHGRLGHVNYASIKKLRSMG 2669
            G F+GKGY C GLF  ++ S+  N++ +     ++   +VWH RL H+N+  + +L SM 
Sbjct: 395  GYFIGKGYECGGLFRFSL-SDFCNKSVNHICGSVDDEANVWHSRLCHINFVLMSRLSSMC 453

Query: 2668 LIPNLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYY 2489
            LIP      G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGKRY+
Sbjct: 454  LIPKFSIVKG-SKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYF 512

Query: 2488 ISFVDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDF 2309
            ++ +DD +R+  +YLL+TKDEA +    +K EV+NQL+ KIKR+RSDRGGE+ +     F
Sbjct: 513  MTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLF 572

Query: 2308 CEKHGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNR 2129
            CE+HGIIHE T PYSP  NGIAERKNRTL ++  AML ++GL +  WGEA+L++ +VLNR
Sbjct: 573  CEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNR 632

Query: 2128 VPHKKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSA 1949
            VP++  DKTPYE+W    PTL  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S 
Sbjct: 633  VPNRNKDKTPYEIWIGRKPTLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSI 692

Query: 1948 AYRFLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGNASV------EQ 1808
            AYRF  +  +       +I ESRDA FFE  FPMK         S    +S+      E 
Sbjct: 693  AYRFSIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEH 752

Query: 1807 SGQLSQEIEIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYR 1628
            + +L  E +++  PRRSKRQRT K++G DF                 + +++ + P S  
Sbjct: 753  THELVSEEDVSEAPRRSKRQRTAKSFGDDF-----------------TVYLVDDTPKSIS 795

Query: 1627 AAMSSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFK 1448
             A +S D  +WKEA++SE+DSI +N TW++   P  CKP+  KW+FKKKL+PDG+I+++K
Sbjct: 796  EAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYK 855

Query: 1447 ARLVVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEE 1268
            ARLV  G +QK+  DFFDTYS VAR++TIR L++LA+ H L+VHQMDVKT FLNG+LDEE
Sbjct: 856  ARLVAKGYTQKEGEDFFDTYSHVARLTTIRVLLSLAASHGLLVHQMDVKTTFLNGELDEE 915

Query: 1267 IYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAK 1088
            IY++QP+G VV G E KVC+L +SLYGLKQAP QW+EKF  T+   GF V+ ++ C+Y +
Sbjct: 916  IYMYQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYR 975

Query: 1087 TRGSDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVRTNGGF 908
                + V++CLYVDD+LIF T L+++ E K +LS  FDMKDLG ADVIL IKL+R   G 
Sbjct: 976  HGRGEGVILCLYVDDILIFKTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGI 1035

Query: 907  GLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCT 728
             L QSHY+E++LNRF   D  P  TPYD S+ L+KN   A +Q +Y++I+GS+MYL + T
Sbjct: 1036 TLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASAT 1095

Query: 727  RPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVS 548
            RPDI++AVS+LSR+T  P  +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+S
Sbjct: 1096 RPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155

Query: 547  DCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIP 368
            D D++ +TSG+VFTLGGGAVSW+S KQT +  STME+E  AL+ A+ EA+WLR+LL D+P
Sbjct: 1156 DVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLP 1215

Query: 367  LGKRSDAPISLHCDSQSAIL 308
            + ++  + I ++CD+Q+ I+
Sbjct: 1216 VVEKPVSAILMNCDNQTVIV 1235



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 115
            RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1248 RHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
          Length = 1413

 Score = 1025 bits (2650), Expect(2) = 0.0
 Identities = 550/1278 (43%), Positives = 787/1278 (61%), Gaps = 18/1278 (1%)
 Frame = -1

Query: 4087 KLEPLDGSNYKRWSQKLLIFFQQIEISYVLVQDXXXXXXXXXXXXXXXXXXXXXXXXXXV 3908
            K    DGSNYKRW  + L++   ++  YV                               
Sbjct: 123  KPHAFDGSNYKRWKARALLWLTAMQCFYV---------------SRGKRSEPPLSPEEEA 167

Query: 3907 KYEKDNLAARGHILTHMTDTLFDLFVDISFAKEIWEELKAKYGGDDAGMKKYVTGKWMDF 3728
            K+E  +   RG +++ + D + D+++ +   K++W+ L+AK+G  DAG + YV  ++ D+
Sbjct: 168  KFEASDCLFRGALISVLADNIVDVYMHMPSGKDMWDALEAKFGVSDAGSELYVMEQFYDY 227

Query: 3727 KLMEDKPLMSKLHEYENLAAAVVAEGMQMCEVLKANVLLEKLPPSWHDYRNTIKHKKRDF 3548
            K+++D+ ++ + HE + LA  +     ++ +   A  ++ KLPPSW D+  ++KHK+++F
Sbjct: 228  KMVDDRSVVEQAHEIQMLAKELENNNCELPDKFVAGGIIAKLPPSWSDFATSLKHKRQEF 287

Query: 3547 TLKELISHMRTEEANRIKD-KSSNLVNFSGANLVESGGASGSGKPHGFKKQKFNGKNPNY 3371
            ++ +LI  +  EE  R KD +   +   S AN+V+      S   H  KK K + K    
Sbjct: 288  SVPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHAS---HNNKKVKPDVKPKAA 344

Query: 3370 QADKKIVKPKVT--CYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKAEKE 3197
               KK  K K    C+ CG  GH +  C +R           K    AN+  +      E
Sbjct: 345  TNFKKKSKGKAKGDCFVCGKSGHWAKDCPER-----------KDRKSANMIIS------E 387

Query: 3196 GDGNDVIAAVTEANL-VENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNXXXX 3020
            G G      +    L V +  DW +DTGA+ H C++ SLF +++    G  + MGN    
Sbjct: 388  GGGTSGYGKILPTVLSVFHSPDWWVDTGANIHVCADISLFSSYQ-VGRGFSLLMGNGSLA 446

Query: 3019 XXXXXXXXXXXXXXXXXXXXSNVMFVPSMRRNLVSGGLLIKAGLKLVFESDRVVMTKSGD 2840
                                 NV  VPS+++NLVSG LL + G +LVFES++ V++K G 
Sbjct: 447  AVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGT 506

Query: 2839 FVGKGYLCDGLFVLNVESEIMNENASSSAYLIESLDVWHGRLGHVNYASIKKLRSMGLIP 2660
            FVGKGY   GLF  ++     N NA +     +  +VWH RL HVN+  + +L +M LIP
Sbjct: 507  FVGKGYDSGGLFRFSLNDMCNNHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIP 566

Query: 2659 NLCYKGGDAKCEVCVEAKFTKKPFKAVKHRSTVLLELIHTDLAEFKGVISRGGKRYYISF 2480
                  G +KC  CV++K  +KP KA + R+   LEL+H+DL E  GV+++GGK+Y+++ 
Sbjct: 567  KFTLVKG-SKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVLTKGGKKYFMTL 625

Query: 2479 VDDFSRYTRLYLLRTKDEATETILKFKTEVKNQLNVKIKRVRSDRGGEYSTLFLKDFCEK 2300
            +DD +R+  +YLL+TKDEA      +K EV+NQL  KIKR+RSDRGGEY +     FCE+
Sbjct: 626  IDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEE 685

Query: 2299 HGIIHEFTVPYSP*QNGIAERKNRTLKNMTTAMLVSSGLSENMWGEAVLSACYVLNRVPH 2120
             GIIHE T PYSP  NG+AERKNRTL  M  AML ++GLS+  WGEAVL+AC+VLN++P 
Sbjct: 686  FGIIHEMTPPYSPQSNGMAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPM 745

Query: 2119 KKLDKTPYELWKSFPPTLELLKVWGCLAKVRLNDPKQVNIGSKTFDCVFIGYAQNSAAYR 1940
            K  + TP+E W+     L  L+ WGCLAKV +   K+  +G KT DCVF+GYA +S  YR
Sbjct: 746  KHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAIHSVGYR 805

Query: 1939 FLTIGDK-------SICESRDAEFFEHIFPMKTNXXXXXXXSTSGN---ASVEQSGQLSQ 1790
            FL +          +I ESRDA FFE+ FPMK         +   +   A +E + Q  +
Sbjct: 806  FLIVNSGVPNMHVGTILESRDATFFENEFPMKYTPSTSSKETVMPHEHFAPIEHNDQTPE 865

Query: 1789 EI---EIAVEPRRSKRQRTEKTYGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAM 1619
            E    +  V+ R+SKRQR  K++G               DDY+V  +++ + P +   A 
Sbjct: 866  ENPEEDNIVDTRKSKRQRVAKSFG---------------DDYIV--YLVDDTPRTIEEAY 908

Query: 1618 SSVDTPFWKEAIQSEIDSITSNHTWDLVNLPANCKPIRSKWIFKKKLKPDGSIDRFKARL 1439
            SS D  +WKEA++SE+DSI SN TW++V  P  CKP+  KW+FKKKL+PDG+I+++KARL
Sbjct: 909  SSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARL 968

Query: 1438 VVVGCSQKKDVDFFDTYSPVARISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYI 1259
            V  G +QK+  DFFDTYSPVAR++TIR L+ALA+ H L+VHQMDVKTAFLNG+L+EEIY+
Sbjct: 969  VAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYM 1028

Query: 1258 HQPEGCVVSGMENKVCRLKRSLYGLKQAPIQWYEKFHNTILLNGFVVSGSESCLYAKTRG 1079
             QP+G V+ G E  VC+L +SLYGLKQAP QW+EKF  T+   GFVV+ ++ C+Y +  G
Sbjct: 1029 DQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGG 1088

Query: 1078 SDSVLICLYVDDMLIFGTCLDIVVETKVYLSSTFDMKDLGEADVILGIKLVR-TNGGFGL 902
             + V++CLYVDD+LIFGT L+++ E K YLS +F+MKDLGEADVIL IKL R   GG  L
Sbjct: 1089 GEGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITL 1148

Query: 901  SQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLKKNNGDAVSQEQYARILGSVMYLTNCTRP 722
             QSHY+++VL+RF  SD  P  T YD S+ L+KN   A  Q +Y++I+GS+MYL + TRP
Sbjct: 1149 VQSHYVDKVLSRFGYSDCKPAPTSYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRP 1208

Query: 721  DIAYAVSRLSRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDC 542
            DI++AVS+LSR+   P  +HW AL R+M++LKGT    + Y+ +P+V+EGY D+NW+SD 
Sbjct: 1209 DISFAVSKLSRFVSNPGDDHWQALERVMRHLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1268

Query: 541  DDVSSTSGFVFTLGGGAVSWKSGKQTCIASSTMESEFIALELASHEAKWLRELLADIPLG 362
            D++ +TSG+VFTLGGGAVSWKS KQT +  STME+E  +L+ A+ EA+WLRELL D+P+ 
Sbjct: 1269 DEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTSLDTATVEAEWLRELLMDLPVV 1328

Query: 361  KRSDAPISLHCDSQSAIL 308
            ++    I ++CD+Q+ I+
Sbjct: 1329 EKPVPAILMNCDNQTVII 1346



 Score = 45.8 bits (107), Expect(2) = 0.0
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = -2

Query: 273  RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGM 118
            RHI+ +   VR+    GVI+LD+V+T RNLAD FTK L +  ++     +G+
Sbjct: 1359 RHIKRRLKSVRKQKNSGVIALDYVQTARNLADQFTKGLPRNVIDSASREMGL 1410