BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00001391
         (2988 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus...  1184   0.0  
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...  1086   0.0  
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...  1044   0.0  
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   942   0.0  
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   942   0.0  
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   922   0.0  
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   922   0.0  
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   874   0.0  
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   852   0.0  
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   849   0.0  
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   849   0.0  
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   847   0.0  
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   843   0.0  
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   834   0.0  
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   830   0.0  
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...   827   0.0  
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas...   820   0.0  
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   819   0.0  
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   819   0.0  
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   818   0.0  

>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
          Length = 1379

 Score = 1184 bits (3062), Expect = 0.0
 Identities = 593/977 (60%), Positives = 739/977 (75%), Gaps = 4/977 (0%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L ELVSL  QLVNGQ+GRNLL+L QDSLT+A+L LEDGV+L K+E+QQLQMFSS +    
Sbjct: 444  LQELVSLDKQLVNGQSGRNLLSLAQDSLTAAHLILEDGVILNKTEIQQLQMFSSSL---- 499

Query: 182  AVEKSKSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNLF 361
                                        +YAS    +  G+++SSS GSSWLND+S NL+
Sbjct: 500  -------------------FGHLLPPEFSYASNSAHVMNGEVLSSS-GSSWLNDTSENLY 539

Query: 362  QCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQE 541
            QCL                E+LCEW+ RRGL+VSL+DLYLS D  S  NLLD+I YGLQE
Sbjct: 540  QCL----------------EVLCEWIARRGLSVSLADLYLSSDQHSRKNLLDEIFYGLQE 583

Query: 542  AERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVFR 721
            A+ +SD S LMV  NQDFLV+C EE   ME+   E++ I +QT AE+FQAS++ +K+V R
Sbjct: 584  AKMLSDISSLMVDWNQDFLVECPEEVG-MENLLTEQMLIGQQTKAEIFQASVSVSKSVVR 642

Query: 722  DMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASW 901
            D+Q LAYKY  K+N+FIAM+KAGSKGNL KL Q S+C+GLQH+LAP+SF++PR L+CASW
Sbjct: 643  DIQNLAYKYPSKNNSFIAMLKAGSKGNLAKLFQQSLCLGLQHTLAPVSFSIPRDLTCASW 702

Query: 902  NHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIP 1081
            N+QK    V   +    V +S+IPC +++ SF AGLNPLE F+LSLT RD SF G+AD+ 
Sbjct: 703  NYQKGNSGVHNFNGYPEVSESYIPCALVSSSFLAGLNPLENFVLSLTARDSSFSGHADVS 762

Query: 1082 GTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDEIDATHAEVSMGGHPVGSIAAC 1261
            GT+ RR+M+F+RD++IGYDGTVRS YGNQV+QF+Y + E+ A  ++ ++GGHPVG++AAC
Sbjct: 763  GTITRRIMYFMRDIIIGYDGTVRSSYGNQVVQFNYCTKEMSAADSDAAVGGHPVGALAAC 822

Query: 1262 AITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNGFEYG 1441
            AI+EA YSALDQP+S LEPSP+LA+KKILECGVKK+TGYK            WT+G EYG
Sbjct: 823  AISEAAYSALDQPVSALEPSPLLAMKKILECGVKKNTGYKSASLFLSRALGRWTDGLEYG 882

Query: 1442 ALEVMNHLECLPFSNIVSETRICYSKRT--STSISPWSCHFHINKEVINKRRLTLLSIIN 1615
            A EV +HLEC+ FS++VSETRICYS +T  S SISPW CHFHINKEV  KR+L + S+IN
Sbjct: 883  AKEVKSHLECIVFSDVVSETRICYSSQTNSSNSISPWVCHFHINKEVARKRQLQIRSVIN 942

Query: 1616 ALRLNNKLNGAKSKFDLPKLHITSEVCSEAD--SQTDSIICISAALTESIQNIPDVDILR 1789
            AL  N+K +G   K +LPKL ITS +CSEAD  +Q+DSIICIS +L E+ +   D+DILR
Sbjct: 943  ALYTNSKFSGVNLKINLPKLQITSRLCSEADICNQSDSIICISVSLIETFREFSDLDILR 1002

Query: 1790 DMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSS 1969
            DMV+P +LQTV+KGF EFKK+DILWK+   + KF +   G+ +LRVVMS+YCE TKFWS 
Sbjct: 1003 DMVMPVILQTVIKGFREFKKVDILWKDDPKHPKFSRSPPGKPFLRVVMSEYCERTKFWSI 1062

Query: 1970 LIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVV 2149
            L DKCLPIRNIIDW++SHPD +LD  EA G+D AWQ FV SLH+AIS TGK ILPEHL++
Sbjct: 1063 LKDKCLPIRNIIDWKQSHPDDILDISEAYGVDAAWQCFVTSLHSAISGTGKPILPEHLIL 1122

Query: 2150 TANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKAEQVDGLRGSL 2329
            TANCLSATGEF+PLN +GL  QRKE N++SPF+Q C SNPSDCF+KAAK  Q+DGL+GSL
Sbjct: 1123 TANCLSATGEFVPLNAKGLALQRKEANVHSPFNQGCLSNPSDCFLKAAKMGQMDGLQGSL 1182

Query: 2330 EALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASAEVKQVCRKSIA 2509
            EALAWGQTP IGTGC F+I+Y GKGH PA  ADVY+LLSTH + AK +A  KQV   SI+
Sbjct: 1183 EALAWGQTPPIGTGCRFDIVYNGKGHIPAKNADVYSLLSTHAERAKPNAMPKQVSGISIS 1242

Query: 2510 SYHFDSKGQNNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKF 2689
            SYHF++KG   LLR M+S+ F++VGI+K+SQRLKR+LK+YP N  L   D STA+ AL+F
Sbjct: 1243 SYHFNTKGCKTLLRRMVSQNFSMVGIQKISQRLKRMLKQYPMNSQLTGEDRSTAIRALQF 1302

Query: 2690 HPKWQDKRGSGISHIKVGRHPEYKENCFFLVRTDGSEEDFSYHKCINRALEMISPEKVKT 2869
            HP+W+DK GSG+S IKVGRHPE+KE CFFLVRTDG+EEDFSY+KCI  ALE+I+PEK K 
Sbjct: 1303 HPQWKDKIGSGVSEIKVGRHPEHKETCFFLVRTDGTEEDFSYNKCIRHALEIIAPEKAKG 1362

Query: 2870 YEPKNNNGTRNHIIELD 2920
            Y  +  N  RN +IELD
Sbjct: 1363 YRSRKENVVRNQVIELD 1379


>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score = 1086 bits (2809), Expect = 0.0
 Identities = 549/958 (57%), Positives = 704/958 (73%), Gaps = 5/958 (0%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            + EL SLK QLVNGQNGR+L++LGQDSLT+AYL L + V L K+E QQLQMF SC+ + P
Sbjct: 434  IGELASLKKQLVNGQNGRSLMSLGQDSLTAAYLILNNSVTLNKAEFQQLQMFCSCVPILP 493

Query: 182  AVEKSKSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNLF 361
            A+    S  ++WTGKQ             Y S+ VCIRKG+LISSS+ +SWL D+  NL+
Sbjct: 494  AIVNMSSNGTWWTGKQLFTLLLPVDSGFDYVSSDVCIRKGELISSSNCTSWLRDADENLY 553

Query: 362  QCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQE 541
             CL+RH GDRALG LN  QE+LCEWL+R+GL+VSLSDLY+S D  S  NLL+++ YGLQE
Sbjct: 554  LCLVRHCGDRALGFLNTAQEVLCEWLSRQGLSVSLSDLYISSDRHSRKNLLEEVYYGLQE 613

Query: 542  AERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVFR 721
            A R+S+ S LMV  ++DFLV   E    ME   KE  +I+    AELFQAS++A+++VFR
Sbjct: 614  AGRLSEVSSLMVDQHRDFLV---EHMGNMEDSIKEHTAISSHARAELFQASVSASRSVFR 670

Query: 722  DMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASW 901
            D+Q L Y+Y+   N+FI+M+K+GSKGNLQK VQHSMCVGLQHSLAPLSF+V   L+CASW
Sbjct: 671  DLQNLVYRYASNENSFISMLKSGSKGNLQKFVQHSMCVGLQHSLAPLSFSVADQLTCASW 730

Query: 902  NHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIP 1081
            N +K   ++  S    +V DS+I C+++  SF  GLNP++CF  SLT+RD SF G+AD+ 
Sbjct: 731  NKEKCYSDIPKS----VVSDSYIVCSIVKNSFLEGLNPIQCFTHSLTSRDSSFSGHADVS 786

Query: 1082 GTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDEIDATHAEVSMGGHPVGSIAAC 1261
            GT+ RRLM+F+RDL+IGYDGTVR+CYGNQV+QF+Y S +++    + +MGGHPVGS+A C
Sbjct: 787  GTICRRLMYFMRDLIIGYDGTVRNCYGNQVVQFNYFSGDVNK---DAAMGGHPVGSLAGC 843

Query: 1262 AITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNGFEYG 1441
            AI+EA YSALD PIS LEPSP+LALK++LECGVK+ST  K            W +GFEYG
Sbjct: 844  AISEAAYSALDLPISALEPSPLLALKEVLECGVKRSTRCKTASLFLSKGLRRWAHGFEYG 903

Query: 1442 ALEVMNHLECLPFSNIVSETRIC--YSKRTSTSISPWSCHFHINKEVINKRRLTLLSIIN 1615
            ALEV NHLE L FS+IVS+ RIC      TST+ SPW+C+F+INKEV  K RL + SI++
Sbjct: 904  ALEVKNHLERLCFSDIVSDVRICPWIDDNTSTT-SPWTCNFYINKEVAKKMRLKMHSIVD 962

Query: 1616 ALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTDSIICISAALTESIQNIPDVDILRDM 1795
            AL  NNKL   K K  LP L I++++CSEAD +     CI+A L    +   D++ILRDM
Sbjct: 963  ALHRNNKLASKKLKIYLPALWISTKLCSEADVKRSDSFCIAAKLIMKHEKFSDMEILRDM 1022

Query: 1796 VIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLI 1975
            V+P LL+TV+KGF EFKK+DILWK+  ++ K  +  SGEL++RV MS+YC+  KFWS+L+
Sbjct: 1023 VVPVLLKTVIKGFPEFKKVDILWKDEPNHEKVARRTSGELFIRVSMSEYCDPNKFWSNLV 1082

Query: 1976 DKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTA 2155
            D CL IRN+IDWERS PD +LDY  A GI  AWQ FV +LH++I DTGK+ILPEHL+VTA
Sbjct: 1083 DSCLRIRNLIDWERSLPDDILDYSNAFGISSAWQSFVKNLHSSIIDTGKTILPEHLIVTA 1142

Query: 2156 NCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKAEQVDGLRGSLEA 2335
            NCLSATGEF+ LN +GL  QRKE +I SPF+QA F NPSD FVKAAKA Q D L GS+EA
Sbjct: 1143 NCLSATGEFVALNAKGLVNQRKEIDIRSPFNQATFLNPSDTFVKAAKACQTDDLVGSVEA 1202

Query: 2336 LAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASAEVKQVCRKSIASY 2515
            L+WGQTP IGTGC+F+++YKGKGHE A   DVY LL +H   AK++ + + +  KS    
Sbjct: 1203 LSWGQTPRIGTGCQFDLIYKGKGHETAKNEDVYGLLISHDGRAKSNVKERSLSMKSSNPL 1262

Query: 2516 HFDSKGQNNLLRDMLS---RCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALK 2686
            H  +  Q+    + LS      +V+GIKK+SQ+LKRILKEYP +R L+  D STA+ AL+
Sbjct: 1263 HGINTQQHKSWLERLSANMNHLSVLGIKKISQKLKRILKEYPMDRQLSGEDKSTALTALQ 1322

Query: 2687 FHPKWQDKRGSGISHIKVGRHPEYKENCFFLVRTDGSEEDFSYHKCINRALEMISPEK 2860
            FHP+W +K GSGI  IKVG HPE+++ CF L R+DG+EEDFSY KCIN ALE+++P K
Sbjct: 1323 FHPRWPEKIGSGIQEIKVGLHPEHQQTCFILKRSDGTEEDFSYRKCINHALELVAPRK 1380


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score = 1044 bits (2700), Expect = 0.0
 Identities = 537/957 (56%), Positives = 692/957 (72%), Gaps = 15/957 (1%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L ELV+L  QLVNGQ+G+NLL+L QDSLT+A+L  +DGV L K EMQQLQMFS+ I + P
Sbjct: 147  LKELVTLNKQLVNGQSGQNLLSLSQDSLTAAHLISQDGVFLNKPEMQQLQMFSAWIPMLP 206

Query: 182  AVEKSKSG-ASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ +S S   SFWTGKQ            + AS GV I+ G+L+S S GSSWL DS  NL
Sbjct: 207  AIIQSTSRETSFWTGKQLFSQLLPLDFEFSNASNGVGIKHGELVSFSDGSSWLRDSGENL 266

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            FQCLLRH  ++ L +L+  QE+LCEWL+RRGL+VSLSDL LS D +S  NLLDDI+ GL+
Sbjct: 267  FQCLLRHCPEKTLDILHAAQEVLCEWLSRRGLSVSLSDLCLSSDPQSRKNLLDDIACGLE 326

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            EAE++SD SLLMVG NQ FL++ SEE   M    KE + +A+QT AEL QASL A+K+VF
Sbjct: 327  EAEKMSDISLLMVGHNQRFLIENSEEDEDMLK-SKEHLYVAQQTSAELCQASLFASKSVF 385

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RDMQ L Y Y+G  N+ +AM+KAGSKGNLQKL QHSMC+GLQHSL P+SF++P +LSCAS
Sbjct: 386  RDMQNLIYHYAGDTNSLLAMLKAGSKGNLQKLFQHSMCLGLQHSLTPVSFSMPHYLSCAS 445

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN+QKN  ++        + DS+IPCT+++ S+  GLNPLE F+ SLTTRD SF G AD+
Sbjct: 446  WNNQKNHLSLYRLDGTREILDSYIPCTVVSSSYLMGLNPLESFLHSLTTRDSSFSGQADV 505

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDEIDATHAEVSMGGHPVGSIAA 1258
             GTL R+LMFF+RD++ GYDGTVR+ YG+Q++QF YG+ ++ A +++V MGGHPVGS+AA
Sbjct: 506  SGTLTRKLMFFMRDIITGYDGTVRNSYGSQIVQFDYGTGDMSAVNSDVLMGGHPVGSLAA 565

Query: 1259 CAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNGFEY 1438
            CAI+EA YSALDQP+S LEPSP++ALKK+L+CGVK +TG K            W NGFE+
Sbjct: 566  CAISEAAYSALDQPVSALEPSPLIALKKVLDCGVKNNTGGKSASLFLSRRLGKWVNGFEF 625

Query: 1439 GALEVMNHLECLPFSNIVSETRICYSKRTSTSISPWSCHFHINKEVINKRRLTLLSIINA 1618
            GALEV +H+E L FS +VSE  I +S    T+ISPW C+F INKEV  KR L L S+++ 
Sbjct: 626  GALEVKDHMESLLFSEVVSEVTISFSTERRTNISPWVCNFCINKEVFMKRNLKLESVVHT 685

Query: 1619 LRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTDSI-ICISAALTE---------SIQNI 1768
            LR N      K K  LP L I ++ CSEAD   DS  ICIS A+++         S++  
Sbjct: 686  LRANCNATPKKMKLKLPNLLIENKDCSEADFHEDSSRICISVAVSQNELSNLHFGSLKEY 745

Query: 1769 PDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSDYCE 1948
              +D LR+MVIP LL+TVVKGF EFKK+DILWK+    S+F KC SGE Y+RV MS+ CE
Sbjct: 746  EILDYLRNMVIPVLLRTVVKGFPEFKKVDILWKDEQSRSRFSKCSSGEPYVRVFMSENCE 805

Query: 1949 ITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSI 2128
              +FW+ L++K L IR++IDW+RSHPD + DY EA GID AW  FVNSL++AIS+TGK+I
Sbjct: 806  RARFWNILVEKSLRIRSLIDWDRSHPDDVHDYGEAFGIDTAWMCFVNSLNSAISETGKTI 865

Query: 2129 LPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKAEQV 2308
            LPEHL+ TANCLS TGEF+ LN +GL QQRKE  I SPF QACFSNPSDCF+KAAK  Q+
Sbjct: 866  LPEHLIATANCLSMTGEFVSLNAKGLAQQRKEATINSPFVQACFSNPSDCFIKAAKMGQM 925

Query: 2309 DGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASAEVK- 2485
            D L+GS+++LAWGQTP IGTG +F+I+Y GKGHEP+   DVY+LL++ +  AK S ++K 
Sbjct: 926  DNLQGSVDSLAWGQTPPIGTGGQFDIIYSGKGHEPSKPTDVYSLLNSQVGFAKPSEKIKL 985

Query: 2486 --QVCRKSIASYHFDSKGQNNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFND 2659
              Q    +  S +  + G+   L  M S       I++VS  LKR+L EY ++  L   D
Sbjct: 986  PVQFTSGNDQSQNLKTNGRKRFLAGMKSLRSAEDEIREVSLALKRMLHEYASDCQLRGED 1045

Query: 2660 NSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCI 2827
             + A+ AL++HP+W++K G+G   IKVGRHP++KE+ CFF+V+TDG+EED SY K I
Sbjct: 1046 KTLALRALQYHPRWEEKTGAGTVEIKVGRHPDHKESRCFFVVKTDGTEEDISYRKSI 1102


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  942 bits (2436), Expect = 0.0
 Identities = 506/983 (51%), Positives = 659/983 (67%), Gaps = 27/983 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L+ELV+LK QL++GQNG+NLL+L  DSLT+A+L LE GV L + +MQQLQMF        
Sbjct: 242  LSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMT 301

Query: 182  AVEKSKSG-ASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ K+  G   +WTGKQ             + S GVCI +G++++SS GSSWL D S NL
Sbjct: 302  AIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDVSDNL 361

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            F  L++H G   L +L   Q +LCEWL+ RGL+VSLSDLY+S DS S  N++D++  GLQ
Sbjct: 362  FYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRENMIDEVCSGLQ 421

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            EAER+S   LLM+  N+DFL    EES     F  E +SI +Q  A L QAS +A K VF
Sbjct: 422  EAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVF 481

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RD+Q L Y Y+   N+ +AM+KAGSKGNL KLVQHSMC+GLQ SL P+SF +PR LSC +
Sbjct: 482  RDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLGLQQSLVPVSFRMPRQLSCDA 541

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN+ K+   +E  H     P S+IP  ++  SF AGLNPLECF+ SLTTRD SF G+AD+
Sbjct: 542  WNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADV 601

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQF-HYGSDEIDATHA--------EVSMG 1231
             GTLNR+LMFF+RDL +GYDGTVR+ YGNQ++QF +Y +++I +T            ++G
Sbjct: 602  SGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTKGTGDALESHNHAIG 661

Query: 1232 GHPVGSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXX 1411
            GHPVGS+AACAI+EA YSALDQP+S LE SP+L LKKILE G    +G K          
Sbjct: 662  GHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGAGSRSGEKTASMFLSKRL 721

Query: 1412 XXWTNGFEYGALEVMNHLECLPFSNIVSETRICYSKRT--STSISPWSCHFHINKEVINK 1585
              W +GFEYGALEV  HLE L  S +VS   IC+S  T  ST   PW CHFHI+KE +  
Sbjct: 722  GRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKENVKT 781

Query: 1586 RRLTLLSIINALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTD-SIICISAALTESIQ 1762
            RRL L SI++AL +  +    K   DLP LHIT + CS A+++ + S ICI+ ++ E+ +
Sbjct: 782  RRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKSEICITVSVVETSK 841

Query: 1763 NIPD-VDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSD 1939
            +    +D LRD+VIP LL+TV+KGF  FKK+DILWKE    SK  +  +GELYL+V MS+
Sbjct: 842  DPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQVFMSE 901

Query: 1940 YCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTG 2119
             C+  KFW++L+D CL IR++IDWERS+PD + D   A GIDVAW+YF+  LH+A+S+TG
Sbjct: 902  SCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETG 961

Query: 2120 KSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKA 2299
            K ILPEHLV+ A+ L+ATGEF+PL+ +GLT QRK   + SPF QACFSNP D FV+AAK 
Sbjct: 962  KKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRAAKM 1021

Query: 2300 EQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASAE 2479
               D L+GSLE+LAWG+TPSIGTG  F+I+Y GKG+EPA   DVYTLL  H+ S     +
Sbjct: 1022 GLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVK 1081

Query: 2480 V----------KQVCRKSIASYHFDSKGQNNLLRDMLSRCF-TVVGIKKVSQRLKRILKE 2626
            V          K + R+       + K   +       R F +   IKK+SQ LK++L +
Sbjct: 1082 VTLDEDGGMDGKSLARRLDRLDDLNKKSCKSEWSITKLRSFISFNDIKKLSQSLKQMLSK 1141

Query: 2627 YPANRHLNFNDNSTAMIALKFHPKWQDKRGSGI-SHIKVGRHPEYKEN-CFFLVRTDGSE 2800
            Y  +R LN  D   AM+AL+FHP+  +K G G    IK+G H EY+++ CF LVR+DGS 
Sbjct: 1142 YAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSV 1201

Query: 2801 EDFSYHKCINRALEMISPEKVKT 2869
            EDFSY KC+  ALE+I+P+K KT
Sbjct: 1202 EDFSYRKCMQHALELIAPQKAKT 1224


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  942 bits (2436), Expect = 0.0
 Identities = 506/983 (51%), Positives = 659/983 (67%), Gaps = 27/983 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L+ELV+LK QL++GQNG+NLL+L  DSLT+A+L LE GV L + +MQQLQMF        
Sbjct: 455  LSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMT 514

Query: 182  AVEKSKSG-ASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ K+  G   +WTGKQ             + S GVCI +G++++SS GSSWL D S NL
Sbjct: 515  AIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDVSDNL 574

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            F  L++H G   L +L   Q +LCEWL+ RGL+VSLSDLY+S DS S  N++D++  GLQ
Sbjct: 575  FYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRENMIDEVCSGLQ 634

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            EAER+S   LLM+  N+DFL    EES     F  E +SI +Q  A L QAS +A K VF
Sbjct: 635  EAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVF 694

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RD+Q L Y Y+   N+ +AM+KAGSKGNL KLVQHSMC+GLQ SL P+SF +PR LSC +
Sbjct: 695  RDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLGLQQSLVPVSFRMPRQLSCDA 754

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN+ K+   +E  H     P S+IP  ++  SF AGLNPLECF+ SLTTRD SF G+AD+
Sbjct: 755  WNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADV 814

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQF-HYGSDEIDATHA--------EVSMG 1231
             GTLNR+LMFF+RDL +GYDGTVR+ YGNQ++QF +Y +++I +T            ++G
Sbjct: 815  SGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTKGTGDALESHNHAIG 874

Query: 1232 GHPVGSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXX 1411
            GHPVGS+AACAI+EA YSALDQP+S LE SP+L LKKILE G    +G K          
Sbjct: 875  GHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGAGSRSGEKTASMFLSKRL 934

Query: 1412 XXWTNGFEYGALEVMNHLECLPFSNIVSETRICYSKRT--STSISPWSCHFHINKEVINK 1585
              W +GFEYGALEV  HLE L  S +VS   IC+S  T  ST   PW CHFHI+KE +  
Sbjct: 935  GRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKENVKT 994

Query: 1586 RRLTLLSIINALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTD-SIICISAALTESIQ 1762
            RRL L SI++AL +  +    K   DLP LHIT + CS A+++ + S ICI+ ++ E+ +
Sbjct: 995  RRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKSEICITVSVVETSK 1054

Query: 1763 NIPD-VDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSD 1939
            +    +D LRD+VIP LL+TV+KGF  FKK+DILWKE    SK  +  +GELYL+V MS+
Sbjct: 1055 DPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQVFMSE 1114

Query: 1940 YCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTG 2119
             C+  KFW++L+D CL IR++IDWERS+PD + D   A GIDVAW+YF+  LH+A+S+TG
Sbjct: 1115 SCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETG 1174

Query: 2120 KSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKA 2299
            K ILPEHLV+ A+ L+ATGEF+PL+ +GLT QRK   + SPF QACFSNP D FV+AAK 
Sbjct: 1175 KKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRAAKM 1234

Query: 2300 EQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASAE 2479
               D L+GSLE+LAWG+TPSIGTG  F+I+Y GKG+EPA   DVYTLL  H+ S     +
Sbjct: 1235 GLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVK 1294

Query: 2480 V----------KQVCRKSIASYHFDSKGQNNLLRDMLSRCF-TVVGIKKVSQRLKRILKE 2626
            V          K + R+       + K   +       R F +   IKK+SQ LK++L +
Sbjct: 1295 VTLDEDGGMDGKSLARRLDRLDDLNKKSCKSEWSITKLRSFISFNDIKKLSQSLKQMLSK 1354

Query: 2627 YPANRHLNFNDNSTAMIALKFHPKWQDKRGSGI-SHIKVGRHPEYKEN-CFFLVRTDGSE 2800
            Y  +R LN  D   AM+AL+FHP+  +K G G    IK+G H EY+++ CF LVR+DGS 
Sbjct: 1355 YAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSV 1414

Query: 2801 EDFSYHKCINRALEMISPEKVKT 2869
            EDFSY KC+  ALE+I+P+K KT
Sbjct: 1415 EDFSYRKCMQHALELIAPQKAKT 1437


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  922 bits (2384), Expect = 0.0
 Identities = 497/983 (50%), Positives = 654/983 (66%), Gaps = 27/983 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L+ELV+LK QL++GQNG+NLL+L  DSLT+A+L LE GV L + +MQQLQMF        
Sbjct: 455  LSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMT 514

Query: 182  AVEKSKSG-ASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ K+  G   +WTGKQ             + S GVCI +G++++SS GSSWL D+S NL
Sbjct: 515  AIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDASDNL 574

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            F  L++H G   L +L   Q +LCEWL+ RGL+VSLSDLY+S DS S  N++D++  GLQ
Sbjct: 575  FYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQ 634

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            EAER+S   LLM+  N+DFL    EES     F  E +SI +Q  A L QAS +A K VF
Sbjct: 635  EAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVF 694

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RD+Q L Y Y+   N+ +AM+KAGSKGNL KLVQH+MC+GLQ SL P+SF +PR LSC +
Sbjct: 695  RDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDA 754

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN+ K+   +E  H     P S+IP  ++  SF AGLNPLECF+ SLTTRD SF G+AD+
Sbjct: 755  WNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADV 814

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQF-HYGSDEIDATHA--------EVSMG 1231
             GTLNR+LMFF+RDL +GYDGTVR+ YGNQ++QF +Y +++I +T            ++G
Sbjct: 815  SGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALESHNHAIG 874

Query: 1232 GHPVGSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXX 1411
            GHPVGS+AACAI+EA Y ALDQP+S LE SP+L LKKILE G    TG K          
Sbjct: 875  GHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMFLSKRL 934

Query: 1412 XXWTNGFEYGALEVMNHLECLPFSNIVSETRICYSKRT--STSISPWSCHFHINKEVINK 1585
              W +GFEYGALEV  HLE L  S +VS   IC+S  T  ST   PW CHFHI+KE +  
Sbjct: 935  GRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKENVKT 994

Query: 1586 RRLTLLSIINALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTD-SIICISAALTESIQ 1762
            RRL L S+++AL +  +    K+  DLP LHIT + CS A+ Q + S ICI+ ++ E+ +
Sbjct: 995  RRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQKEKSEICITVSVVETSK 1054

Query: 1763 NIPD-VDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSD 1939
            +    +D LRD+VIP LL+TV+KGF  FKK+DILWKE    SK  +  +GELYL+V MS+
Sbjct: 1055 DPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGPTGELYLQVFMSE 1114

Query: 1940 YCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTG 2119
             C+  KFW++L+D CL IR++IDWERS+PD + D   A GIDVAW+YF+  LH+A+S+TG
Sbjct: 1115 SCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETG 1174

Query: 2120 KSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKA 2299
            K ILPEHLV+ A+ L+ TGEF+PL+ +GLT QRK   + SPF QACF+NP D FV+AAK 
Sbjct: 1175 KKILPEHLVLAADSLTTTGEFVPLSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKM 1234

Query: 2300 EQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASAE 2479
               D L+GSLE+LAWG+TPSIGTG  F+I+Y GKG+E A Q +VYTLL   +     + +
Sbjct: 1235 GLSDDLQGSLESLAWGKTPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVK 1294

Query: 2480 V----------KQVCRKSIASYHFDSKG-QNNLLRDMLSRCFTVVGIKKVSQRLKRILKE 2626
            V            + R+       D K  ++ L    L   F+   IKK+SQ LK++L +
Sbjct: 1295 VTLGKDGGMDGMSLVRRLDRLDDLDKKSCKSELSFTKLRSYFSFNDIKKLSQSLKQMLSK 1354

Query: 2627 YPANRHLNFNDNSTAMIALKFHPKWQDKRGSGI-SHIKVGRHPEYK-ENCFFLVRTDGSE 2800
            Y   R LN  D   AM+AL+FHP+  +K G G    IK+G H E++   CF +VR+D + 
Sbjct: 1355 YDIGRELNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTV 1414

Query: 2801 EDFSYHKCINRALEMISPEKVKT 2869
            EDFSY KC+  ALE+I+P+K KT
Sbjct: 1415 EDFSYRKCMQHALELIAPQKAKT 1437


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  922 bits (2384), Expect = 0.0
 Identities = 497/983 (50%), Positives = 654/983 (66%), Gaps = 27/983 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L+ELV+LK QL++GQNG+NLL+L  DSLT+A+L LE GV L + +MQQLQMF        
Sbjct: 147  LSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMT 206

Query: 182  AVEKSKSG-ASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ K+  G   +WTGKQ             + S GVCI +G++++SS GSSWL D+S NL
Sbjct: 207  AIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDASDNL 266

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            F  L++H G   L +L   Q +LCEWL+ RGL+VSLSDLY+S DS S  N++D++  GLQ
Sbjct: 267  FYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQ 326

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            EAER+S   LLM+  N+DFL    EES     F  E +SI +Q  A L QAS +A K VF
Sbjct: 327  EAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVF 386

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RD+Q L Y Y+   N+ +AM+KAGSKGNL KLVQH+MC+GLQ SL P+SF +PR LSC +
Sbjct: 387  RDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDA 446

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN+ K+   +E  H     P S+IP  ++  SF AGLNPLECF+ SLTTRD SF G+AD+
Sbjct: 447  WNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADV 506

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQF-HYGSDEIDATHA--------EVSMG 1231
             GTLNR+LMFF+RDL +GYDGTVR+ YGNQ++QF +Y +++I +T            ++G
Sbjct: 507  SGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALESHNHAIG 566

Query: 1232 GHPVGSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXX 1411
            GHPVGS+AACAI+EA Y ALDQP+S LE SP+L LKKILE G    TG K          
Sbjct: 567  GHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMFLSKRL 626

Query: 1412 XXWTNGFEYGALEVMNHLECLPFSNIVSETRICYSKRT--STSISPWSCHFHINKEVINK 1585
              W +GFEYGALEV  HLE L  S +VS   IC+S  T  ST   PW CHFHI+KE +  
Sbjct: 627  GRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKENVKT 686

Query: 1586 RRLTLLSIINALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTD-SIICISAALTESIQ 1762
            RRL L S+++AL +  +    K+  DLP LHIT + CS A+ Q + S ICI+ ++ E+ +
Sbjct: 687  RRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQKEKSEICITVSVVETSK 746

Query: 1763 NIPD-VDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSD 1939
            +    +D LRD+VIP LL+TV+KGF  FKK+DILWKE    SK  +  +GELYL+V MS+
Sbjct: 747  DPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGPTGELYLQVFMSE 806

Query: 1940 YCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTG 2119
             C+  KFW++L+D CL IR++IDWERS+PD + D   A GIDVAW+YF+  LH+A+S+TG
Sbjct: 807  SCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETG 866

Query: 2120 KSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKA 2299
            K ILPEHLV+ A+ L+ TGEF+PL+ +GLT QRK   + SPF QACF+NP D FV+AAK 
Sbjct: 867  KKILPEHLVLAADSLTTTGEFVPLSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKM 926

Query: 2300 EQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASAE 2479
               D L+GSLE+LAWG+TPSIGTG  F+I+Y GKG+E A Q +VYTLL   +     + +
Sbjct: 927  GLSDDLQGSLESLAWGKTPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVK 986

Query: 2480 V----------KQVCRKSIASYHFDSKG-QNNLLRDMLSRCFTVVGIKKVSQRLKRILKE 2626
            V            + R+       D K  ++ L    L   F+   IKK+SQ LK++L +
Sbjct: 987  VTLGKDGGMDGMSLVRRLDRLDDLDKKSCKSELSFTKLRSYFSFNDIKKLSQSLKQMLSK 1046

Query: 2627 YPANRHLNFNDNSTAMIALKFHPKWQDKRGSGI-SHIKVGRHPEYK-ENCFFLVRTDGSE 2800
            Y   R LN  D   AM+AL+FHP+  +K G G    IK+G H E++   CF +VR+D + 
Sbjct: 1047 YDIGRELNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTV 1106

Query: 2801 EDFSYHKCINRALEMISPEKVKT 2869
            EDFSY KC+  ALE+I+P+K KT
Sbjct: 1107 EDFSYRKCMQHALELIAPQKAKT 1129


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  874 bits (2258), Expect = 0.0
 Identities = 472/986 (47%), Positives = 633/986 (64%), Gaps = 26/986 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L+ELV+L  QL+N Q+GRNLL+L QDSL++A+L +EDGVLL   +MQQL+MF      SP
Sbjct: 502  LSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSP 561

Query: 182  AVEKSKS-GASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ K+       WTGKQ             +   GV I  G+LISSS GS+WL D  GNL
Sbjct: 562  AIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSAWLRDIDGNL 621

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            F  L++    +AL  L   QE+LCEWL+ RGL+VSLSD+YLS DS S  N++D++  GL 
Sbjct: 622  FSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNMIDEVFCGLL 681

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
             AE+      L+V  +Q+FL+   E +        + +   RQ  A L Q+S+ A K  F
Sbjct: 682  VAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAALCQSSVCAFKQKF 741

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RD+Q L Y+Y+ K N+ +AM+KAGSKGNL KLVQ  +C+GLQHSL PLSF +P  LSCA+
Sbjct: 742  RDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAA 801

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN QK +P + I +D     +S+IP  ++  SF  GLNPLECF+ S+T+RD SF  NAD+
Sbjct: 802  WNKQK-VPGL-IQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADL 859

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYG-------SDEIDATHAEVSMGGH 1237
            PGTL RRLMFF+RDL I YDGTVR+ YGNQ++QF Y        SD I+       MGG 
Sbjct: 860  PGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDGINEDTCAYDMGGQ 919

Query: 1238 PVGSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXX 1417
            PVGSI+ACAI+EA YSALDQPIS+LEPSP+L LK++LECG++KST  +            
Sbjct: 920  PVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEK 979

Query: 1418 WTNGFEYGALEVMNHLECLPFSNIVSETRICYSKR--TSTSISPWSCHFHINKEVINKRR 1591
              +GFEYGALEV NHLE L FS+IVS   I +S +  + T  SPW CHFH+ +E+  KR 
Sbjct: 980  RKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFSPWVCHFHVCEEIAKKRS 1039

Query: 1592 LTLLSIINALRLNNKLNGAKSKFDLPKLHITSEVCS-EADSQTDSIICISAALTESIQNI 1768
            L   SII+AL +      A+SK +LP L ITS+ C  + + +     CI+ ++  S ++ 
Sbjct: 1040 LKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFVDMEKEDSDCFCITVSIVNSKKSC 1099

Query: 1769 PDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSDYCE 1948
              +D +RD+VIP LL  VVKG L+ KK+DILW +  D+    K  SG LYLRV +S  C 
Sbjct: 1100 IQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPDSDVL-KSSSGRLYLRVYVSGDCG 1158

Query: 1949 ITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSI 2128
               FW  L+D CL I ++IDWERSHPD + D +   GID  W+YF+NSL +AISD GK++
Sbjct: 1159 KKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISDIGKTV 1218

Query: 2129 LPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKAEQV 2308
            LPEHL++ A+CLSATGEF+ LN +G+ +Q++ T+I SPF Q CFS+P  CF+KA K    
Sbjct: 1219 LPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFSSPGSCFIKAGKRAVA 1278

Query: 2309 DGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASAEVK- 2485
            D L GSL+ALAWG+ PS+G+G  F+ILY  KGHE A   D+Y LL +     + + +VK 
Sbjct: 1279 DNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKV 1338

Query: 2486 --------QVCRKSIASYHFDS-----KGQNNLLRDMLSRCFTVVGIKKVSQRLKRILKE 2626
                      C   +   + DS     K    + + +L    ++  I+K+S+RLK IL++
Sbjct: 1339 PITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQK 1398

Query: 2627 YPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEY-KENCFFLVRTDGSEE 2803
            YP N  L+  D +T M+AL FHP+  +K G G  +IKV  H +Y    CF LVRTDG+EE
Sbjct: 1399 YPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEE 1458

Query: 2804 DFSYHKCINRALEMISPEKVKTYEPK 2881
            DFSYHKC++ ALE+I P + ++Y+ +
Sbjct: 1459 DFSYHKCVHGALEIIDPRRARSYQSR 1484


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  852 bits (2201), Expect = 0.0
 Identities = 474/1000 (47%), Positives = 623/1000 (62%), Gaps = 40/1000 (4%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L ELVSL  QL+NGQ+GRNLL+L  DSLT+AYL  EDGVLL   +MQQL+MF       P
Sbjct: 483  LIELVSLNRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPFP 542

Query: 182  AVEKSKS-GASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ K+    +S WTGKQ             +    V IR G+LISSS GS+WL D+ GNL
Sbjct: 543  AIVKAPLLRSSVWTGKQLLSMLFPLEFDYDFTPNDVVIRNGELISSSEGSTWLRDADGNL 602

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            FQ L++H+  + L  L   QE+LCEWL+ RGL+VSLSDLYLS DS S  N++D+I  GLQ
Sbjct: 603  FQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLSDLYLSSDSNSQKNMMDEIFCGLQ 662

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            E E+  +   LMV  N DFLV   EE +       E++   +Q  A L QAS+ + K VF
Sbjct: 663  EIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCYEKQRSAALSQASVDSFKQVF 722

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RD+Q L YKY+ K N+ + M KAGSKGNL KLVQHS+C+GLQHSL PLSF  P  LSCA+
Sbjct: 723  RDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLGLQHSLVPLSFRFPHQLSCAA 782

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN+QK+    +   D      ++IP  ++  SF  GLNPLE F+ S+T+RD SF  NAD+
Sbjct: 783  WNNQKSHGLTQKVDDTAESAKNYIPYAVVESSFMTGLNPLESFVHSVTSRDSSFSDNADL 842

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDE-----IDATHAEVS------ 1225
            PGTL+RRLMFF+RDL   YDGTVR+ YG+ V+QF Y  D+         H  +S      
Sbjct: 843  PGTLSRRLMFFMRDLYTAYDGTVRNSYGDLVVQFCYDIDKDASSPTSCAHGLISESSTIP 902

Query: 1226 --MGGHPVGSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXX 1399
              +GG PVGS++ACAI+EA YSALDQP+S+LE SP+L LK+++ECG K+S   +      
Sbjct: 903  EGIGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKRVVECGSKRSNADQTMTLFL 962

Query: 1400 XXXXXXWTNGFEYGALEVMNHLECLPFSNIVSETRICYSKR--TSTSISPWSCHFHINKE 1573
                    +G EY ALEV NHLE L FS+IV+   I +S +       +PW CHFH+ K+
Sbjct: 963  SNKLGRKRHGSEYAALEVKNHLERLTFSDIVTTVSIIFSPQMYRENHFTPWVCHFHVCKD 1022

Query: 1574 VINKRRLTLLSIINALRLNNKLNGAKSKFDLPKLHITS--EVCSEAD-SQTDSIICISAA 1744
             + +R+L + SII++L ++        K  LP + ITS    CS  D    D   CI+  
Sbjct: 1023 TMKRRQLKVQSIIDSLHMHCTTAKTMWKISLPDMQITSNGRACSHIDMPNEDDTFCITVT 1082

Query: 1745 LTE-SIQNIPDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYL 1921
            + E S  +  ++D++RDMVIP LL+ V+KGF E KK+DILWK+    SK  K   GELYL
Sbjct: 1083 IVEYSKSSHMELDVIRDMVIPYLLEAVIKGFPEIKKVDILWKDRLKVSKPHKSSCGELYL 1142

Query: 1922 RVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHT 2101
            RV +S    ITK W  L++ CL I ++IDW RSHPD +     A GID  W++F+N+L +
Sbjct: 1143 RVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDNINQLCLAYGIDAGWKFFLNNLKS 1202

Query: 2102 AISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCF 2281
            AISDTGK+IL EHL+V ANCLSATGEF+ LN +GL QQR+   + SPF QACFSNPS  F
Sbjct: 1203 AISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLRQQREHAYVSSPFMQACFSNPSASF 1262

Query: 2282 VKAAKAEQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKS 2461
            VKAAK    D L+G+++ALAWG+ P IGTG +F+I+Y  K    A   DVY LL + + S
Sbjct: 1263 VKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIYSVKDQRLAEPVDVYKLLGSSISS 1322

Query: 2462 AKASAEVKQVCRKSIASYHFDSKGQNNLLRDMLS-------------------RCFTVVG 2584
             K   E +        + +F S+   +LL D L                       T+  
Sbjct: 1323 QKQDVEFEVP-----KALNFKSEKYGSLLIDALGDSASEELKKIETKRRSIWRELLTLDD 1377

Query: 2585 IKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEY-K 2761
            I+++S+ L+ IL +YP +  L+  D +T M+AL FHP+  +K GSG   IKVG HPE+  
Sbjct: 1378 IQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHPRRDEKIGSGAQEIKVGYHPEHAN 1437

Query: 2762 ENCFFLVRTDGSEEDFSYHKCINRALEMISPEKVKTYEPK 2881
              CF LVRTDG+  DFSYHKC+  ALE+I+P + K+Y+ K
Sbjct: 1438 ARCFSLVRTDGTIVDFSYHKCVLGALEIIAPHRAKSYKSK 1477


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  849 bits (2193), Expect = 0.0
 Identities = 471/977 (48%), Positives = 619/977 (63%), Gaps = 17/977 (1%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L ELV+L  QL+N Q+GRNLL+LGQDSLT+A+L +ED VLL   +MQQLQMF     +SP
Sbjct: 472  LTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDSVLLSHLQMQQLQMFCPHRFLSP 531

Query: 182  AVEKSKSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNLF 361
             + K  S  S W+GKQ            T+ S  V I  G+LIS+  GSSWL D  GNLF
Sbjct: 532  DIFKI-SKDSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLISAE-GSSWLRDYEGNLF 589

Query: 362  QCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQE 541
            Q L++ + D+ L  L   QE+LCEWL+ RG+TVSLSDLYL+  S S   L+D+I YGL+E
Sbjct: 590  QYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLRE 649

Query: 542  AERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVFR 721
            A+   +   LMV  + +FL+  +E+S      Q E +S  +Q  A L QAS+ A K VF 
Sbjct: 650  AQDTCNFQQLMVDSHMNFLMS-AEDSESTRSLQGEHLSYEKQRSAALSQASVDAFKHVFW 708

Query: 722  DMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASW 901
            D+Q LAYKY  K N+ +AM KAGSKGNL KLVQHS+C+GLQHSLAPLSF  P  LSCA+W
Sbjct: 709  DIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAW 768

Query: 902  NHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIP 1081
            N  +   N E +        S+IP  ++A SF  GLNPLECFI S+T+RD SF  NAD+P
Sbjct: 769  NRLRAGDNTECAK-------SYIPSAVVANSFLTGLNPLECFIHSVTSRDSSFSDNADLP 821

Query: 1082 GTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDEIDATHAEVSMGGHPVGSIAAC 1261
            GTL RRLMFF+RDL   YDGTVR+ YGNQ++QF Y  +       E+  GG  VGS++AC
Sbjct: 822  GTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEI--GGQSVGSLSAC 879

Query: 1262 AITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNGFEYG 1441
            AI+EA YSALDQPIS+LE SP+L LK +LECG KKS   +              +GFEYG
Sbjct: 880  AISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYG 939

Query: 1442 ALEVMNHLECLPFSNIVSETRICYSKRTSTS--ISPWSCHFHINKEVINKRRLTLLSIIN 1615
            ALEV NHLECL  S+IVS + I YS +T +    SPW CHFH+ KE++ +  L   SII+
Sbjct: 940  ALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIID 999

Query: 1616 ALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTD--SIICISAALTESIQNIP-DVDIL 1786
            +L    K    + K  +P + I+++ CS  + Q +     C++  + E+ +    D++ +
Sbjct: 1000 SLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETI 1059

Query: 1787 RDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWS 1966
            +  V+P LL+TVVKGF E KK+DILWK+    SK      GELYLRV MS  C IT  WS
Sbjct: 1060 QMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWS 1119

Query: 1967 SLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLV 2146
            +L++ C  I ++IDW RSHPD +  +  A GID   Q+F+ +L +AISDTGK+ILPEHL+
Sbjct: 1120 ALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLL 1179

Query: 2147 VTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKAEQVDGLRGS 2326
            + AN LSATGEF+ LN +GL  QRK +++ SPF QA FSNP   F+KAAKA  VD L+GS
Sbjct: 1180 IVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGS 1239

Query: 2327 LEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLST--------HLKSAKASAEV 2482
            ++AL WG+ PS+GTG  F+I+Y G+G   +   DVY LLST         LK  KA   +
Sbjct: 1240 VDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLI 1299

Query: 2483 KQVCRKSIASYHFDSKGQ---NNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNF 2653
               C      + F   G      + R +L + +T   + ++S  LK+IL +Y   + L+ 
Sbjct: 1300 SDKCGAKFGDFAFKGLGNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSE 1359

Query: 2654 NDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCIN 2830
             D +T + AL FHP+  +K G     I+V  HPE++ + CF LVR DGS EDFSYHKC+ 
Sbjct: 1360 KDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVI 1419

Query: 2831 RALEMISPEKVKTYEPK 2881
             ALE+I+PEK + Y  K
Sbjct: 1420 GALEIIAPEKAEIYRAK 1436


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  849 bits (2193), Expect = 0.0
 Identities = 471/977 (48%), Positives = 619/977 (63%), Gaps = 17/977 (1%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L ELV+L  QL+N Q+GRNLL+LGQDSLT+A+L +ED VLL   +MQQLQMF     +SP
Sbjct: 510  LTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDSVLLSHLQMQQLQMFCPHRFLSP 569

Query: 182  AVEKSKSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNLF 361
             + K  S  S W+GKQ            T+ S  V I  G+LIS+  GSSWL D  GNLF
Sbjct: 570  DIFKI-SKDSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLISAE-GSSWLRDYEGNLF 627

Query: 362  QCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQE 541
            Q L++ + D+ L  L   QE+LCEWL+ RG+TVSLSDLYL+  S S   L+D+I YGL+E
Sbjct: 628  QYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLRE 687

Query: 542  AERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVFR 721
            A+   +   LMV  + +FL+  +E+S      Q E +S  +Q  A L QAS+ A K VF 
Sbjct: 688  AQDTCNFQQLMVDSHMNFLMS-AEDSESTRSLQGEHLSYEKQRSAALSQASVDAFKHVFW 746

Query: 722  DMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASW 901
            D+Q LAYKY  K N+ +AM KAGSKGNL KLVQHS+C+GLQHSLAPLSF  P  LSCA+W
Sbjct: 747  DIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAW 806

Query: 902  NHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIP 1081
            N  +   N E +        S+IP  ++A SF  GLNPLECFI S+T+RD SF  NAD+P
Sbjct: 807  NRLRAGDNTECAK-------SYIPSAVVANSFLTGLNPLECFIHSVTSRDSSFSDNADLP 859

Query: 1082 GTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDEIDATHAEVSMGGHPVGSIAAC 1261
            GTL RRLMFF+RDL   YDGTVR+ YGNQ++QF Y  +       E+  GG  VGS++AC
Sbjct: 860  GTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEI--GGQSVGSLSAC 917

Query: 1262 AITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNGFEYG 1441
            AI+EA YSALDQPIS+LE SP+L LK +LECG KKS   +              +GFEYG
Sbjct: 918  AISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYG 977

Query: 1442 ALEVMNHLECLPFSNIVSETRICYSKRTSTS--ISPWSCHFHINKEVINKRRLTLLSIIN 1615
            ALEV NHLECL  S+IVS + I YS +T +    SPW CHFH+ KE++ +  L   SII+
Sbjct: 978  ALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIID 1037

Query: 1616 ALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTD--SIICISAALTESIQNIP-DVDIL 1786
            +L    K    + K  +P + I+++ CS  + Q +     C++  + E+ +    D++ +
Sbjct: 1038 SLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETI 1097

Query: 1787 RDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWS 1966
            +  V+P LL+TVVKGF E KK+DILWK+    SK      GELYLRV MS  C IT  WS
Sbjct: 1098 QMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWS 1157

Query: 1967 SLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLV 2146
            +L++ C  I ++IDW RSHPD +  +  A GID   Q+F+ +L +AISDTGK+ILPEHL+
Sbjct: 1158 ALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLL 1217

Query: 2147 VTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKAEQVDGLRGS 2326
            + AN LSATGEF+ LN +GL  QRK +++ SPF QA FSNP   F+KAAKA  VD L+GS
Sbjct: 1218 IVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGS 1277

Query: 2327 LEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLST--------HLKSAKASAEV 2482
            ++AL WG+ PS+GTG  F+I+Y G+G   +   DVY LLST         LK  KA   +
Sbjct: 1278 VDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLI 1337

Query: 2483 KQVCRKSIASYHFDSKGQ---NNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNF 2653
               C      + F   G      + R +L + +T   + ++S  LK+IL +Y   + L+ 
Sbjct: 1338 SDKCGAKFGDFAFKGLGNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSE 1397

Query: 2654 NDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCIN 2830
             D +T + AL FHP+  +K G     I+V  HPE++ + CF LVR DGS EDFSYHKC+ 
Sbjct: 1398 KDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVI 1457

Query: 2831 RALEMISPEKVKTYEPK 2881
             ALE+I+PEK + Y  K
Sbjct: 1458 GALEIIAPEKAEIYRAK 1474


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  847 bits (2187), Expect = 0.0
 Identities = 469/977 (48%), Positives = 618/977 (63%), Gaps = 17/977 (1%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L ELV+L  QL+N Q+GRNLL+LGQDSLT+A+L +EDGVLL   +MQQLQMF     +SP
Sbjct: 472  LTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDGVLLSHLQMQQLQMFCPHRFLSP 531

Query: 182  AVEKSKSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNLF 361
             + K  S  S W+GKQ            T+ S  V I  G+LIS+  GSSWL D  GNLF
Sbjct: 532  DIFKI-SKDSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLISAE-GSSWLRDYEGNLF 589

Query: 362  QCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQE 541
            Q L++ + D+ L  L   QE+LCEWL+ RG+TVSLSDLYL+  S S   L+D+I YGL+E
Sbjct: 590  QYLIKRYRDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLRE 649

Query: 542  AERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVFR 721
            A+   +   LMV  + +FL+  +++S      Q E +S  +Q  A L QAS+ A K VF 
Sbjct: 650  AQDTCNFQQLMVDSHMNFLMS-AKDSESTRSLQGEHLSYEKQRSAALSQASVDAFKHVFW 708

Query: 722  DMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASW 901
            D+Q LAYKY  K N+ + M KAGSKGNL KLVQHS+C+GLQHSLAPLSF  P  LSCA+W
Sbjct: 709  DIQNLAYKYGSKDNSLLGMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAW 768

Query: 902  NHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIP 1081
            N  +   N E +        S+IP  ++  SF  GLNPLECFI S+T+RD SF  NAD+P
Sbjct: 769  NRLRAGDNTECAK-------SYIPSAVVENSFLTGLNPLECFIHSVTSRDSSFSDNADLP 821

Query: 1082 GTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDEIDATHAEVSMGGHPVGSIAAC 1261
            GTL RRLMFF+RDL   YDGTVR+ YGNQ++QF Y  +       E+  G  PVGS++AC
Sbjct: 822  GTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEI--GDQPVGSLSAC 879

Query: 1262 AITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNGFEYG 1441
            AI+EA YSALDQPIS+LE SP+L LK +LECG KKS   +              +GFEYG
Sbjct: 880  AISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYG 939

Query: 1442 ALEVMNHLECLPFSNIVSETRICYSKRTSTS--ISPWSCHFHINKEVINKRRLTLLSIIN 1615
            ALEV NHLECL  S+IVS + I YS +T +    SPW CHFH+ KE++ +  L   SII+
Sbjct: 940  ALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIID 999

Query: 1616 ALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTD--SIICISAALTESIQNIP-DVDIL 1786
            +L    K    + K  +P + I+++ CS  + Q +     C++  + E+ +    D++ +
Sbjct: 1000 SLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETI 1059

Query: 1787 RDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWS 1966
            +  V+P LL+TVVKGF E KK+DILWK+    SK      GELYLRV MS  C IT  WS
Sbjct: 1060 QMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWS 1119

Query: 1967 SLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLV 2146
            +L++ C  I ++IDW RSHPD +  +  A GID   Q+F+ +L +AISDTGK+ILPEHL+
Sbjct: 1120 ALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLL 1179

Query: 2147 VTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKAEQVDGLRGS 2326
            + AN LSATGEF+ LN +GL  QRK +++ SPF QA FSNP   F+KAAKA  VD L+GS
Sbjct: 1180 IVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGS 1239

Query: 2327 LEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLST--------HLKSAKASAEV 2482
            ++AL WG+ PS+GTG  F+I+Y G+G   +   DVY LLST         LK  KA   +
Sbjct: 1240 VDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLI 1299

Query: 2483 KQVCRKSIASYHFDSKGQ---NNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNF 2653
               C      + F   G      + R +L + +T   + ++S  LK+IL +Y   + L+ 
Sbjct: 1300 SDKCGAKFGDFAFKGLGNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSE 1359

Query: 2654 NDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCIN 2830
             D +T + AL FHP+  +K G     I+V  HPE++ + CF LVR DGS EDFSYHKC+ 
Sbjct: 1360 KDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVI 1419

Query: 2831 RALEMISPEKVKTYEPK 2881
             ALE+I+PEK + Y  K
Sbjct: 1420 GALEIIAPEKAEIYRAK 1436


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  843 bits (2178), Expect = 0.0
 Identities = 466/989 (47%), Positives = 626/989 (63%), Gaps = 29/989 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            + ELVSL  QL NGQ+GRNLL+L  DSLT+A+L LEDGV L   +MQQLQM +    + P
Sbjct: 481  VRELVSLDKQLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP 540

Query: 182  AVEKSKSGASF-WTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ KS    +  WTGKQ            +  S  V I KG+LISS  GS WL DS  NL
Sbjct: 541  AIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISSE-GSYWLRDSGRNL 599

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            FQ L+ H   + L  L D Q +LCEWL+ RGL+VSLSDLYLS DS SH N++DDI  GLQ
Sbjct: 600  FQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHENMMDDIFCGLQ 659

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            EAE   +   LMV  +++ L+   E++ ++     ER+   +Q  A L QAS+ A K VF
Sbjct: 660  EAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIYEKQKSAALNQASVDAFKKVF 719

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RD+Q L YKYSGK N+ + M KAGSKGNL KLVQHSMC+GLQHSL  LSF++P  LSCA+
Sbjct: 720  RDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCAA 779

Query: 899  WNHQKNLPNVEISHDAGLVPD---SFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGN 1069
            WN QK +P   I  D   +PD   SFIP  ++  SF +GLNP ECF  S+T RD SF  N
Sbjct: 780  WNSQK-MPRY-IQKDG--LPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDN 835

Query: 1070 ADIPGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSD------EIDATHAEVSMG 1231
            A++PGTL R+L F +RD+   YDGTVR+ YGNQ++QF Y  D      E +  + +  +G
Sbjct: 836  AEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSESESENNNRDRGIG 895

Query: 1232 GHPVGSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXX 1411
            GHPVGS+AACAI+EA YSALDQPIS+LE SP+L LK++LECG K+++  +          
Sbjct: 896  GHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSTKQTFSLFLSEKL 955

Query: 1412 XXWTNGFEYGALEVMNHLECLPFSNIVSETRICYSKRTSTS--ISPWSCHFHINKEVINK 1585
               + GFEYGAL V NHLE + F +IVS   I +S   S     SPW CHFH+ KE++ K
Sbjct: 956  SKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPLPSRKKHFSPWVCHFHVCKEILKK 1015

Query: 1586 RRLTLLSIINALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQTD--SIICISAALTESI 1759
            RRL + S+I++L +       + + +LP L I ++ C  ADS T+    +C++  + E+ 
Sbjct: 1016 RRLKMNSVIHSLNMRCDSMRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENT 1075

Query: 1760 QN-IPDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMS 1936
            +N    +D ++D++I  LL TV++GF E  ++DI W +     K P+C  GELYLRV MS
Sbjct: 1076 KNSFLQLDFIQDLLIHFLLGTVIRGFTEIDRVDITWNDRPKVPK-PRCSHGELYLRVTMS 1134

Query: 1937 DYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDT 2116
                 ++FW++L++ CLPI ++IDW RSHPD       A GID  W+YF+NSL +A  D 
Sbjct: 1135 GEGN-SRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATLDV 1193

Query: 2117 GKSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAK 2296
            GK+I  EHL++ +N LSATGEF+ LN +GLT QR+   + +PF QACFS+P  C +KAAK
Sbjct: 1194 GKTIRLEHLLLVSNSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACMIKAAK 1253

Query: 2297 AEQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASA 2476
            A   D L GSL+ALAWG+ PS+GTG +F+ILY GKGHE     DVY LL       K + 
Sbjct: 1254 AGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNT 1313

Query: 2477 EVKQVCRKSIASYHFDS-------------KGQNNLLRDMLSRCFTVVGIKKVSQRLKRI 2617
            +++ + + +I+  +                K  +++ + +L +  T+  I+K+S  L+ I
Sbjct: 1314 KIESLDKNTISEKYSAQLMLKNGGSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTI 1373

Query: 2618 LKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKE-NCFFLVRTDG 2794
            L +Y  N  LN  D ST M+AL FHP   +K G G   IKVG H +Y+   CF L+R+DG
Sbjct: 1374 LHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDG 1433

Query: 2795 SEEDFSYHKCINRALEMISPEKVKTYEPK 2881
            + EDFSYHKC+  ALE+I+P +VK Y+ K
Sbjct: 1434 TTEDFSYHKCVLGALEIIAPHRVKGYQSK 1462


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  834 bits (2154), Expect = 0.0
 Identities = 459/986 (46%), Positives = 615/986 (62%), Gaps = 26/986 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            LNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL LEDGVLL   +MQQLQM  S   + P
Sbjct: 476  LNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQLQMHCSRKLIPP 535

Query: 182  AVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ K+  S  S W+GKQ             + S GV +  G+LIS S  S WL DS  N+
Sbjct: 536  AIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSEASGWLRDSDNNV 595

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            FQ L+ H+  + L +L+  Q+ LCEWL+  G +VSLSDLYLS DS +  N++++ISYGLQ
Sbjct: 596  FQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEISYGLQ 655

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            EAE+  D + L+V    DFL    +E   +     + ++  RQ  A L QAS+ A + VF
Sbjct: 656  EAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAALSQASVDAFRQVF 715

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            R++Q+LA KY+ K NAF+AM KAGSKGNL KLVQHSMC+GLQHSL  L + +PR LSCA+
Sbjct: 716  RNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLPYKIPRKLSCAA 775

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN QK +   +I  D      S+IP  ++  SF  GLNPLECF+ S+T RD SF  NAD+
Sbjct: 776  WNSQKGM---QIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADL 832

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDE---IDATHAEVSMGGHPVGS 1249
            PGTL RRLMFF+RD+   YDGTVR+ YGNQ+IQF Y ++E    D+   E ++GG PVG+
Sbjct: 833  PGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSHFREDTIGGEPVGT 892

Query: 1250 IAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNG 1429
            ++ACA++EA YSAL QPIS+LE SP+L LK +LECG +K  G +              NG
Sbjct: 893  LSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSEKIGKQRNG 952

Query: 1430 FEYGALEVMNHLECLPFSNIVSETRICYS--KRTSTSISPWSCHFHINKEVINKRRLTLL 1603
            FEY ALEV N+LE L FS+IVS   I ++   R+    SPW CHFH++KE + +R L + 
Sbjct: 953  FEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSPWVCHFHLDKENVTRRNLEVH 1012

Query: 1604 SIINALRLNNKLNGAKSKFDLPKLHITSEVCS-----------EADSQTDSIICISAALT 1750
            SII++L          SK  LP L I+++ CS             D + D   CI+  + 
Sbjct: 1013 SIIDSLYQRYDSLRKGSKVTLPNLKISTKKCSVHYMAKEGGETSVDKEIDGEDCITVTIV 1072

Query: 1751 ESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVV 1930
            E+  N   +D++R+M+IP LL+T +KG  E KK+DILWK+ S  SK     SGELYLRV 
Sbjct: 1073 ENYMNSVQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDLSKGSKSYNGSSGELYLRVT 1132

Query: 1931 MSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAIS 2110
            MS   +   FW +LI+ C  I  +IDW RSHPD +  +  A GID  WQ+F+++L +A S
Sbjct: 1133 MSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSAFGIDAGWQHFLHNLSSATS 1192

Query: 2111 DTGKSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKA 2290
            DTG SILP+HL + AN LSA+GEF+ LN +G+ +QR   ++ SPF QACFSNP   F+KA
Sbjct: 1193 DTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNHASVSSPFVQACFSNPGSTFLKA 1252

Query: 2291 AKAEQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKA 2470
            AK+  VD L+G+L+ LAWG   S+GT  +F+++Y  K  E A   DVY LL T       
Sbjct: 1253 AKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQELAKSVDVYDLLETSFDQLDQ 1312

Query: 2471 SAEVKQVCRKS---IASYHFDSKG-----QNNLLRDMLSRCFTVVGIKKVSQRLKRILKE 2626
                 Q    S     S     KG     +    + ++    T   I+K++   + IL +
Sbjct: 1313 EINTSQSNNYSSDKCNSQFRHKKGRYAPKEPKQWKSVIRNFMTANDIQKLTSASRFILNK 1372

Query: 2627 YPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFLVRTDGSEE 2803
            YP ++ L+  D  T M  L FHP+  +K GSG  HIKVG HP++ ++ CFF++RTDG+ E
Sbjct: 1373 YPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQHIKVGWHPKFTDSRCFFIIRTDGTVE 1432

Query: 2804 DFSYHKCINRALEMISPEKVKTYEPK 2881
            DFSY KCI  AL+++ PEK K  + K
Sbjct: 1433 DFSYRKCILGALDVVDPEKSKIQKKK 1458


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  830 bits (2145), Expect = 0.0
 Identities = 460/987 (46%), Positives = 614/987 (62%), Gaps = 27/987 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            LNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL LEDGVLL   +MQQLQM  S   + P
Sbjct: 476  LNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQLQMHCSRKLIPP 535

Query: 182  AVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ K+  S  S W+GKQ             + S GV +  G+LIS S  S WL DS  N+
Sbjct: 536  AIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSEASGWLRDSDNNV 595

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            FQ L+ H+  + L +L+  Q+ LCEWL+  G +VSLSDLYLS DS +  N++++ISYGLQ
Sbjct: 596  FQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEISYGLQ 655

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            EAE+  D + L+V    DFL    +E   +     + ++  RQ  A L QAS+ A + VF
Sbjct: 656  EAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAALSQASVDAFRQVF 715

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            R++Q+LA KY+ K NAF+AM KAGSKGNL KLVQHSMC+GLQHSL  L + +PR LSCA+
Sbjct: 716  RNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLPYKIPRKLSCAA 775

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN QK +   +I  D      S+IP  ++  SF  GLNPLECF+ S+T RD SF  NAD+
Sbjct: 776  WNSQKGM---QIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADL 832

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDE---IDATHAEVSMGGHPVGS 1249
            PGTL RRLMFF+RD+   YDGTVR+ YGNQ+IQF Y ++E    D+   E ++GG PVG+
Sbjct: 833  PGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSHFREDTIGGEPVGT 892

Query: 1250 IAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNG 1429
            ++ACA++EA YSAL QPIS+LE SP+L LK +LECG +K  G +              NG
Sbjct: 893  LSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSEKIGKQRNG 952

Query: 1430 FEYGALEVMNHLECLPFSNIVSETRICYS--KRTSTSISPWSCHFHINKEVINKRRLTLL 1603
            FEY ALEV N+LE L FS+IVS   I ++   R+    SPW CHFH++KE + +R L + 
Sbjct: 953  FEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSPWVCHFHLDKENVTRRNLEVH 1012

Query: 1604 SIINALRLNNKLNGAKSKFDLPKLHI-TSEVCS-----------EADSQTDSIICISAAL 1747
            SII++L          SK  LP L I T+  CS             D + D   CI+  +
Sbjct: 1013 SIIDSLYQRYDSLRKGSKVTLPNLKISTNRKCSVHYMAKEGGETSVDKEIDGEDCITVTI 1072

Query: 1748 TESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRV 1927
             E+  N   +D++R+M+IP LL+T +KG  E KK+DILWK+ S  SK     SGELYLRV
Sbjct: 1073 VENYMNSVQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDLSKGSKSYNGSSGELYLRV 1132

Query: 1928 VMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAI 2107
             MS   +   FW +LI+ C  I  +IDW RSHPD +  +  A GID  WQ+F+++L +A 
Sbjct: 1133 TMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSAFGIDAGWQHFLHNLSSAT 1192

Query: 2108 SDTGKSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVK 2287
            SDTG SILP+HL + AN LSA+GEF+ LN +G+ +QR   ++ SPF QACFSNP   F+K
Sbjct: 1193 SDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNHASVSSPFVQACFSNPGSTFLK 1252

Query: 2288 AAKAEQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAK 2467
            AAK+  VD L+G+L+ LAWG   S+GT  +F+++Y  K  E A   DVY LL T      
Sbjct: 1253 AAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQELAKSVDVYDLLETSFDQLD 1312

Query: 2468 ASAEVKQVCRKS---IASYHFDSKG-----QNNLLRDMLSRCFTVVGIKKVSQRLKRILK 2623
                  Q    S     S     KG     +    + ++    T   I+K++   + IL 
Sbjct: 1313 QEINTSQSNNYSSDKCNSQFRHKKGRYAPKEPKQWKSVIRNFMTANDIQKLTSASRFILN 1372

Query: 2624 EYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFLVRTDGSE 2800
            +YP ++ L+  D  T M  L FHP+  +K GSG  HIKVG HP++ ++ CFF++RTDG+ 
Sbjct: 1373 KYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQHIKVGWHPKFTDSRCFFIIRTDGTV 1432

Query: 2801 EDFSYHKCINRALEMISPEKVKTYEPK 2881
            EDFSY KCI  AL+++ PEK K  + K
Sbjct: 1433 EDFSYRKCILGALDVVDPEKSKIQKKK 1459


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score =  827 bits (2136), Expect = 0.0
 Identities = 457/985 (46%), Positives = 633/985 (64%), Gaps = 27/985 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L ELVSL  QL+NGQ+G+NL++L QDSLT+A+L LED V + + +MQQLQMF S   +SP
Sbjct: 429  LKELVSLDKQLLNGQSGKNLISLSQDSLTAAHLMLEDSVTINRFQMQQLQMFISHHPLSP 488

Query: 182  AVEKSKS-GASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ K+ S     WTGKQ             ++SA V I+ G+LIS+  GSSWL D+  N+
Sbjct: 489  AIIKAPSLSTPVWTGKQVFSMLLPEGFDYVFSSANVYIKNGELISAE-GSSWLRDTD-NI 546

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            FQ L +++ D+ L +L   QE+LCEWL+ RGL+VSL DL LS D  S  N+ D+I YGLQ
Sbjct: 547  FQSLAKNFPDKVLDILFAAQEILCEWLSTRGLSVSLLDLNLSSDPSSWKNMKDEIFYGLQ 606

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            EAE+      L+  C  DFL + S E       Q E++S  +Q  A L QAS+ A K VF
Sbjct: 607  EAEQACMFKQLLNTC-WDFLTEDSMEDLSPISLQVEKLSHDKQRSAVLSQASIDAFKKVF 665

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RD+QTLA++Y+ + N+ + M+KAGSKGNL KLVQHSMC+GLQHSL PLSF  P  LSCA+
Sbjct: 666  RDIQTLAFRYACEDNSLLTMLKAGSKGNLLKLVQHSMCLGLQHSLVPLSFGFPHLLSCAA 725

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN  K    ++   DA     S+IP  ++  SF  GLNPLE F+ S+T+R+ SF  NA++
Sbjct: 726  WNEHKVSCLIQEDADAPKSAKSYIPYAVVGNSFLTGLNPLESFVHSVTSRESSFSDNAEL 785

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDEIDATHAEVSMGGHPVGSIAA 1258
            PGTL+RRLM+F+RDL I YDGT+R+ YG+ V+QF+YG+DE         + G PVGS++A
Sbjct: 786  PGTLHRRLMYFMRDLYIAYDGTIRNSYGSHVVQFYYGTDE-----GTSEIAGQPVGSLSA 840

Query: 1259 CAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNGFEY 1438
            CAI+EA YSALDQPIS+LE SP+L LK  LECG KK  G +              +G+EY
Sbjct: 841  CAISEAAYSALDQPISLLETSPLLNLKNALECGSKKRQGGQTMLLYLSRRLGRQRHGYEY 900

Query: 1439 GALEVMNHLECLPFSNIVSETRICY-----SKRTSTSISPWSCHFHINKEVINKRRLTLL 1603
             ALEV N+LE L FS+IVS   I +     S+++  S SPW        E++ +RRLT+ 
Sbjct: 901  AALEVKNYLEALMFSDIVSTVMITFTSQAGSQKSQKSFSPW--------EILRRRRLTVQ 952

Query: 1604 SIINALRLNNKLNGAKSKFDLPKLHITSEVCS-----EADSQTDSIICISAALTESIQNI 1768
            S+IN+L   +  +   SK  LP L I S+ CS     E D+ T    CI+ ++  S  ++
Sbjct: 953  SVINSLYERHSTSRKGSKVKLPNLRIRSKDCSVPATREEDNDT---CCITVSIECSKNSV 1009

Query: 1769 PDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVMSDYCE 1948
              +  ++D++IP LL+T+VKGF E +K+DILW + S+ SK  +  SGELYL+V MS    
Sbjct: 1010 IQLITVQDLLIPFLLETIVKGFREIEKVDILWSDRSNTSKATRDSSGELYLKVSMSGDSG 1069

Query: 1949 ITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSI 2128
            +  +WS+L++ CL I ++IDW RSHP+ + ++    GID  W++F+N+L +A+SD GK+I
Sbjct: 1070 VKSYWSTLMNDCLRIMDLIDWSRSHPENVNEFCSVYGIDSGWKFFLNNLESAVSDVGKTI 1129

Query: 2129 LPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAAKAEQV 2308
            LPEHL++ AN LS TG F+ L P+GL +QR+  ++ +PFSQACFSNP+ CF+KAAKAE  
Sbjct: 1130 LPEHLLLVANTLSVTGNFVGLTPKGLARQREHASVATPFSQACFSNPAACFIKAAKAEVT 1189

Query: 2309 DGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKASAEVKQ 2488
            DGL G+L+ALAWG  P +GTG +F +++ GKGHE     +VY +L+T +     S +V+ 
Sbjct: 1190 DGLHGTLDALAWGNIPPLGTGGQFELVFSGKGHEVDKPINVYDMLATGI-----SPDVQG 1244

Query: 2489 VCRKSIASYH----------FD---SKGQNNL--LRDMLSRCFTVVGIKKVSQRLKRILK 2623
            V     A  H          +D   S+G   L   +D + + F +  I  +S  L +IL 
Sbjct: 1245 VNETPDAKNHRSVKFGALLLYDKSVSQGLKKLGISKDRIKKLFKLDDIWILSNALAKILN 1304

Query: 2624 EYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFLVRTDGSE 2800
            +YP N+ L+  D ST MIAL FHP+  +K G+G   IKV  HP+++ + CF LVR DG+ 
Sbjct: 1305 KYPINQSLDHKDKSTLMIALYFHPRIDEKIGTGFQDIKVAYHPKHQSSRCFVLVRADGTV 1364

Query: 2801 EDFSYHKCINRALEMISPEKVKTYE 2875
            EDFSY KC+  ALE+I P+  + Y+
Sbjct: 1365 EDFSYRKCVLGALEIIDPQAAEIYK 1389


>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
            gi|561031868|gb|ESW30447.1| hypothetical protein
            PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  820 bits (2117), Expect = 0.0
 Identities = 455/994 (45%), Positives = 617/994 (62%), Gaps = 34/994 (3%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L+ELV+L  QL NGQ+GRNLL+L +DSLT+AYL +EDGVLL   +MQQLQM  +     P
Sbjct: 463  LSELVALDKQLFNGQSGRNLLSLSEDSLTAAYLLMEDGVLLDVYQMQQLQMLCNKGLAPP 522

Query: 182  AVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            A+ KS  S +SFW+GKQ            ++ S GV +  G+L+SS   S WL DS  N+
Sbjct: 523  AIVKSPSSNSSFWSGKQLFSMLLPSDFDYSFPSDGVVVSDGELVSSFEASGWLRDSDCNV 582

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            FQ L+ H+  ++L  L   Q +LCEWL+  G +VSLSDLYLS DS +  N++++I YGLQ
Sbjct: 583  FQGLVEHFQGKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEICYGLQ 642

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            +AE+  +   L++ C  DFL    EES        + ++  RQ  A L QAS+ A + VF
Sbjct: 643  DAEKACNFKQLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAALSQASVDAFRHVF 702

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            R++Q+LA KY+   N F+AM KAGSK +L +L QHSMC+G+Q+SL  LS+ +PRHLSCA+
Sbjct: 703  RNIQSLADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQNSLVRLSYRLPRHLSCAA 762

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN QK L +++I         S+IPC ++  SF  GLNPLECF+ S+T R   F  NAD+
Sbjct: 763  WNSQKGLDSIQIYSGTLESVQSYIPCAVVKSSFLTGLNPLECFVHSVTIRASGFSENADV 822

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDE---IDATHAEVSMGGHPVGS 1249
            PGTL RRLMFF+RDL   YDGTVR+ YGNQ+IQF Y  DE    D +  E ++GG PVG+
Sbjct: 823  PGTLTRRLMFFMRDLFAAYDGTVRNLYGNQLIQFSYDIDENTSCDKSFKEYAIGGEPVGA 882

Query: 1250 IAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWTNG 1429
            ++A A++EA YSALDQP+S+LE SP+L LK +LECG +K  G +              +G
Sbjct: 883  LSASAVSEAGYSALDQPVSLLEASPLLNLKNVLECGSRKKNGDQSVSLFFSEKVGKQRHG 942

Query: 1430 FEYGALEVMNHLECLPFSNIVSETRICYSKRTSTSI---SPWSCHFHINKEVINKRRLTL 1600
            FEY ALEV N+LE L FS IVS   I ++   S+S+   SPW CHFH++KE++ +R+L +
Sbjct: 943  FEYAALEVKNYLERLLFSKIVSTVMIIFTPPDSSSLEKYSPWVCHFHLDKEILMRRKLKV 1002

Query: 1601 LSIINALRLNNKLNGAKSKFDLPKLHITSEVCSEADS-----------QTDSIICISAAL 1747
             SII+ L         + K    KL I+S+ CS  DS           + DS  CI+  +
Sbjct: 1003 HSIIDYLYQRYYSQSTEPKVGFTKLKISSKKCS-VDSTAKEGEDICIDKEDSDDCITVTI 1061

Query: 1748 TESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRV 1927
             E+ +N   ++ +RD++IP  L T +KGF++ KK+DILW   S  +      SGELYLRV
Sbjct: 1062 VENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWNNQSKGTNSYNGSSGELYLRV 1121

Query: 1928 VMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAI 2107
             ++      +FW  L++ C  I  IIDW RSHPD +     A GIDVAWQY+  SL +AI
Sbjct: 1122 TVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLSSAYGIDVAWQYYYKSLASAI 1181

Query: 2108 SDTGKSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVK 2287
            SDTGKSILP+HL + AN +SA+GEF+ LN +G+ QQR+  ++ SPF QACFSNP   F+K
Sbjct: 1182 SDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQHASVSSPFVQACFSNPGRSFIK 1241

Query: 2288 AAKAEQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHL---- 2455
            AAK+E  D L+GSL+ALAWG  PS+GT   F+I+Y  KGHE     DVY LL        
Sbjct: 1242 AAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGHEVDKAVDVYKLLEASFDKPN 1301

Query: 2456 ----------KSAKASAEVKQVCRKSIASYHF-DSKGQNNLLRDMLSRCFTVVGIKKVSQ 2602
                       S K  +E +         Y F + K   N+LR+ +    TV  I+K++ 
Sbjct: 1302 NKIGFHAHNNSSGKCGSEFRHK-----NGYAFKEGKQWKNILRNFV----TVNDIQKLTT 1352

Query: 2603 RLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFL 2779
              + IL +Y  +  L+  D ST +  L FHP+  +K G G   IKVG HP++K++ CF +
Sbjct: 1353 ASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGPQDIKVGWHPKFKDSRCFHI 1412

Query: 2780 VRTDGSEEDFSYHKCINRALEMISPEKVKTYEPK 2881
            VRTDG+ EDFSY KCI RALE++ P+  K  + K
Sbjct: 1413 VRTDGTVEDFSYRKCILRALEVVDPKMSKIQKKK 1446


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
            max]
          Length = 1369

 Score =  819 bits (2116), Expect = 0.0
 Identities = 459/987 (46%), Positives = 615/987 (62%), Gaps = 27/987 (2%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIE--V 175
            LNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL +EDGVLL   +MQQLQM S   +  +
Sbjct: 379  LNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISDKRLI 438

Query: 176  SPAVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSG 352
             PAV K+  S +S W+GKQ            ++ S GV +  G+L+SSS  S WL DS  
Sbjct: 439  PPAVVKAPSSNSSLWSGKQIFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDY 498

Query: 353  NLFQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYG 532
            N+FQ L+ H+  + L  L   Q++LCEWL+  G +VSLSDLYLS DS +  N++++I YG
Sbjct: 499  NVFQSLVEHYQGKTLNFLYTAQKVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEIFYG 558

Query: 533  LQEAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKT 712
            LQ+AE+  +   L++ C  DFL    +ES        +R++  RQ  A L QAS+ A + 
Sbjct: 559  LQDAEQACNFKQLLLDCYCDFLSGSIQESENAITVDADRLNYERQISAALSQASVDAFRQ 618

Query: 713  VFRDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSC 892
            VFR++Q+LA KY+ K NAF+AM KAGSKGNL KLVQHSMC+G+Q+SL  LS+ +PRHLSC
Sbjct: 619  VFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSC 678

Query: 893  ASWNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNA 1072
            A+WN QK L ++++S        S+IP  ++  SF  GLNPLECF+ S+T RD SF  +A
Sbjct: 679  AAWNSQKWLDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHA 738

Query: 1073 DIPGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDE---IDATHAEVSMGGHPV 1243
            D+PGTL RRLMFF+RDL   YDGTVR+ YGNQ+IQF Y  +E    D    E ++GG PV
Sbjct: 739  DLPGTLTRRLMFFMRDLHDAYDGTVRNLYGNQLIQFSYDIEEDSSCDKGFQEYAIGGEPV 798

Query: 1244 GSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWT 1423
            G+I+ACAI+EA YSAL QP+S+LE SP+L LK +LECG +K  G +              
Sbjct: 799  GAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQR 858

Query: 1424 NGFEYGALEVMNHLECLPFSNIVSETRICYSKRTSTS---ISPWSCHFHINKEVINKRRL 1594
            +GFEY ALEV N+LE L FSNIVS   I ++    +S    SPW CHFH++KE++ +R+L
Sbjct: 859  HGFEYAALEVKNYLERLLFSNIVSTVMIIFTPHDGSSQEKYSPWVCHFHLDKEIVTRRKL 918

Query: 1595 TLLSIINALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQT----DSII-------CISA 1741
             + SII++L          SK     L I+S     ADS      D+ I       CI+ 
Sbjct: 919  KVHSIIDSLYQRYYSQRKDSKVCFTNLKISSNRKCSADSMAKEGEDTSIDKKEGDDCITV 978

Query: 1742 ALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYL 1921
             + E+ +N   +D +RD+VIP LL T +KGFL+ KK+D+LW   S         SGELYL
Sbjct: 979  TIVENSKNPIQLDSVRDLVIPFLLGTAIKGFLDVKKVDVLWNNQSKVKNSCNGFSGELYL 1038

Query: 1922 RVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHT 2101
            RV +S      +FW  L++ C  I +IIDW RSHPD +  +  A GID  WQYF NSL +
Sbjct: 1039 RVTLSSEGSRGRFWGVLLNLCHKIMHIIDWTRSHPDNINHFSSAYGIDAGWQYFFNSLAS 1098

Query: 2102 AISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCF 2281
            A SDTGKSILP+HL + AN LS +GEF+ LN +G+  QRK  ++ SPF QACF+NP  CF
Sbjct: 1099 ATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVSSPFVQACFANPGSCF 1158

Query: 2282 VKAAKAEQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLL--STHL 2455
            +KAAK+   D L+GSL+ALAWG   S+GT   F+I+Y  K    A   +VY LL  S   
Sbjct: 1159 IKAAKSGVTDNLQGSLDALAWGNCLSMGTSGMFDIIYSEK---VAKSGNVYELLEASFDK 1215

Query: 2456 KSAKASAEVKQVCRKSIASYHFDSKG----QNNLLRDMLSRCFTVVGIKKVSQRLKRILK 2623
             + KA   + +       S      G    +    + +L    TV  I+K++   + IL 
Sbjct: 1216 PNNKAGTHLHKYSSDKCGSEFRHKNGYALKEGKQWKTILRNFVTVNDIQKLTFASRCILN 1275

Query: 2624 EYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFLVRTDGSE 2800
            +Y  +  L+ +D ST +  L FHP+  +K G G   IKVG HP+YK++ CF +VR DG+ 
Sbjct: 1276 KYSIDELLSESDRSTMLRVLNFHPRKSEKFGIGPQDIKVGWHPKYKDSRCFHIVRIDGTV 1335

Query: 2801 EDFSYHKCINRALEMISPEKVKTYEPK 2881
            EDFSY KCI  AL+++ P+K K  E K
Sbjct: 1336 EDFSYRKCILGALDIVDPKKSKIQEKK 1362


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  819 bits (2115), Expect = 0.0
 Identities = 464/973 (47%), Positives = 615/973 (63%), Gaps = 17/973 (1%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIEVSP 181
            L ELV+L  QL+N QNGRNLL+  QDSL +A+L +EDGVLL   +MQQLQMF      SP
Sbjct: 475  LRELVALDKQLINVQNGRNLLSFSQDSLVAAHLVMEDGVLLSLQQMQQLQMFCPHQLFSP 534

Query: 182  AVEKSKS-GASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 358
            AV K+ S     WTGKQ               S+ V IR G+LISS  GS WL D+ GNL
Sbjct: 535  AVRKAPSLNGCAWTGKQLISMLLPRGFDHECPSSDVYIRDGELISSE-GSFWLRDTDGNL 593

Query: 359  FQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYGLQ 538
            FQ L++   D+ L  L   QE+LCEWL+ RGL+VSLSDLYL PDS+S  N++D++ +GLQ
Sbjct: 594  FQSLIKQCQDQVLDFLYIAQEVLCEWLSMRGLSVSLSDLYLCPDSDSRENMMDEVLFGLQ 653

Query: 539  EAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKTVF 718
            +A+   +    MV   +DFL    E+  Y  +F  E +   +Q  A L QAS+ A K VF
Sbjct: 654  DAKGTCNMKQFMVDSCRDFLASIDEDEQYSVNFDVEHLCHEKQRSAALSQASVDAFKHVF 713

Query: 719  RDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCAS 898
            RD+QTL YKY+ K NA +AM K+GSKGNL K+VQHSMC+GLQHSL PLSF +P  LSC +
Sbjct: 714  RDIQTLGYKYASKDNALMAMFKSGSKGNLLKVVQHSMCLGLQHSLVPLSFRMPLQLSCDA 773

Query: 899  WNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADI 1078
            WN QK    VE +        S+IP  ++   F  GLNPLECF+ S+T+R+ SF  NAD+
Sbjct: 774  WNKQKAENAVECAR-------SYIPSAVVEGCFLTGLNPLECFVHSVTSRESSFSDNADL 826

Query: 1079 PGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDEIDATH----AEV-----SMG 1231
            PGTL RRLMFF+RD+   YDG+VRS YGNQ+IQF Y  DE  +      A++      M 
Sbjct: 827  PGTLTRRLMFFMRDVHAAYDGSVRSAYGNQLIQFSYNIDEGRSAETYGTAKIVDNYDGMA 886

Query: 1232 GHPVGSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXX 1411
            G PVGS+AAC+I+EA YSALDQPIS+LE SP+L LK +LECG+KKS  +K          
Sbjct: 887  GKPVGSLAACSISEAAYSALDQPISLLEKSPLLNLKNVLECGLKKSNAHKSMSLFLSEKL 946

Query: 1412 XXWTNGFEYGALEVMNHLECLPFSNIVSETRICYSKRTS--TSISPWSCHFHINKEVINK 1585
                +GFEYGAL+V +HLE L FS+IVS +RI +S ++   T  SPW CHFH+ KE++ K
Sbjct: 947  GRRRHGFEYGALKVQDHLERLLFSDIVSVSRIIFSSQSESKTCFSPWVCHFHVYKEIMKK 1006

Query: 1586 RRLTLLSIINALRLNNKLNG-AKSKFDLPKLHITSEVCSEADS--QTDSIICISAALTES 1756
            R L + SIIN L      NG  KS  +LP + I+ + CS AD+  + +  +CI+  + E 
Sbjct: 1007 RNLNVDSIINIL------NGRCKSNTNLPNVQISCKSCSIADNHREKEETLCITVTIVER 1060

Query: 1757 IQNIPD-VDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYLRVVM 1933
             +N    +  ++D++IP LL+TV+KG +E  K+DILWK+    SK      GELYLRV M
Sbjct: 1061 SKNSSTRLATIQDLMIPFLLETVLKGLMEINKVDILWKDWPRISKTHNQPYGELYLRVSM 1120

Query: 1934 SDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISD 2113
            S   E T+ W+ L+D CLPI ++IDW  S PD + D+  A GID  W++F+  L +AISD
Sbjct: 1121 SADSEKTRLWNLLMDYCLPIMDMIDWTCSRPDNVRDFSLAYGIDAGWKFFLQRLESAISD 1180

Query: 2114 TGKSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCFVKAA 2293
             GKS+LPEH+++ ANCLS TGEF+ LN +G  +QR++ ++ SPF QACFS+P +CF+KAA
Sbjct: 1181 VGKSVLPEHMLLVANCLSVTGEFVGLNAKGWKRQREDASVSSPFVQACFSSPGNCFIKAA 1240

Query: 2294 KAEQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLLSTHLKSAKAS 2473
            KA   D L+GSL+ALAWG+ PS+GTG +F+I+Y GK         V  LL          
Sbjct: 1241 KAGVKDDLQGSLDALAWGKVPSVGTG-QFDIVYSGK---------VKLLL---------F 1281

Query: 2474 AEVKQVCRKSIASYHFDSKGQNNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNF 2653
              VK+V  K+  S+                    VV    +   L  +L  Y  ++ LN 
Sbjct: 1282 LLVKRVKLKTPPSF--------------------VVLTVFLETPLINLLVWYSVDQQLNE 1321

Query: 2654 NDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFFLVRTDGSEEDFSYHKCIN 2830
             D  T  +AL FHP+ ++K GSG   IKV +HPEY+++ CF LVR+DG+ EDFSY KC+ 
Sbjct: 1322 ADKCTLTMALYFHPRKEEKIGSGFKDIKVVKHPEYQDSRCFSLVRSDGTIEDFSYRKCVY 1381

Query: 2831 RALEMISPEKVKT 2869
             ALE+I+P K ++
Sbjct: 1382 GALEIIAPHKARS 1394


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score =  818 bits (2114), Expect = 0.0
 Identities = 459/995 (46%), Positives = 619/995 (62%), Gaps = 35/995 (3%)
 Frame = +2

Query: 2    LNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVLLKKSEMQQLQMFSSCIE--V 175
            LNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL +EDGVLL   +MQQLQM S   +  +
Sbjct: 465  LNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLI 524

Query: 176  SPAVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSG 352
             PAV K+  S +S W GKQ            ++ S GV +  G+L+SSS  S WL DS  
Sbjct: 525  PPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDY 584

Query: 353  NLFQCLLRHWGDRALGVLNDCQELLCEWLTRRGLTVSLSDLYLSPDSESHNNLLDDISYG 532
            N+FQ L+ H+  + L  L   Q++LCEWL+  G +VSLSDLYLS DS +  N++++I YG
Sbjct: 585  NVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEEIFYG 644

Query: 533  LQEAERVSDASLLMVGCNQDFLVDCSEESNYMEHFQKERISIARQTVAELFQASLTAAKT 712
            LQ+AER  +   L++    DFL    +ES        +R++  RQ  A L QAS+ A + 
Sbjct: 645  LQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLSQASVDAFRQ 704

Query: 713  VFRDMQTLAYKYSGKHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSC 892
            VFR++Q+LA KY+ K N+F+AM KAGSKGNL KLVQHSMC+G+Q+SL  LS+ +PRHLSC
Sbjct: 705  VFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSC 764

Query: 893  ASWNHQKNLPNVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNA 1072
            A WN QK + ++++S        S+IP  ++  SF  GLNPLECF+ S+T RD SF  +A
Sbjct: 765  ADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHA 824

Query: 1073 DIPGTLNRRLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSDEIDATH---AEVSMGGHPV 1243
            D+PGTL RRLMFF+RDL   YDGTVR+ YGNQ+IQF Y  +E  + +    + ++GG  V
Sbjct: 825  DLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNKGFQQYALGGESV 884

Query: 1244 GSIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXXWT 1423
            G+I+ACAI+EA YSAL QP+S+LE SP+L LK +LECG +K  G +              
Sbjct: 885  GAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQR 944

Query: 1424 NGFEYGALEVMNHLECLPFSNIVSETRICYS---KRTSTSISPWSCHFHINKEVINKRRL 1594
            +GFEY ALEV N+LE L FSNIVS+  I ++    R+    SPW CHFH++KE++ +R+L
Sbjct: 945  HGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDKEIVTRRKL 1004

Query: 1595 TLLSIINALRLNNKLNGAKSKFDLPKLHITSEVCSEADSQT----DSII-------CISA 1741
             + SII++L          SK     L I+S  CS ADS      D+ I       CI  
Sbjct: 1005 KVHSIIDSLYQRYYSQRKDSKVCFTNLKISSRKCS-ADSMVKEGEDTSIDKEEGDDCIMV 1063

Query: 1742 ALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKIDILWKEGSDNSKFPKCRSGELYL 1921
             + E+ +N   +D +RD+VIP LL T ++GFL+ KK+DILW   S  +      SGELYL
Sbjct: 1064 TIVENSKNPIQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQSKVTNSRNGFSGELYL 1123

Query: 1922 RVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEANGIDVAWQYFVNSLHT 2101
            RV +S      +FW  L+  C  I +IIDW RSH D +  +  A GID  WQYF NSL  
Sbjct: 1124 RVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYGIDAGWQYFFNSLAC 1183

Query: 2102 AISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLTQQRKETNIYSPFSQACFSNPSDCF 2281
            A SDTGKSILP+HL + AN LS +GEF+ LN +G+  QRK  ++ SPF QACF+NP  CF
Sbjct: 1184 ATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVSSPFVQACFANPGSCF 1243

Query: 2282 VKAAKAEQVDGLRGSLEALAWGQTPSIGTGCEFNILYKGKGHEPAGQADVYTLL------ 2443
            +KAAK+   D L+GSL+ LAWG   S+GT   F+++Y  KGH+ A   DVY LL      
Sbjct: 1244 IKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVAKSVDVYELLEASFDK 1303

Query: 2444 -----STHL---KSAKASAEVKQVCRKSIASYHFDSKGQNNLLRDMLSRCFTVVGIKKVS 2599
                  THL    S K  +E +     ++     + K    +LR+ +    TV  I+K++
Sbjct: 1304 PNNKIGTHLHKYSSDKCGSEFRHKNGYALK----EGKQWKTILRNFV----TVNDIQKLT 1355

Query: 2600 QRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRHPEYKEN-CFF 2776
               + IL +Y  +  L+ +D ST +  L FHP   +K G G   IKVG HP+YK++ CF 
Sbjct: 1356 FASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKVGWHPKYKDSRCFH 1415

Query: 2777 LVRTDGSEEDFSYHKCINRALEMISPEKVKTYEPK 2881
            ++RTDG+ EDFSY KCI  AL+++ P+K K  E K
Sbjct: 1416 IIRTDGTVEDFSYRKCILGALDIVDPKKSKIQEKK 1450