BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00000454
         (2318 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus...   678   0.0  
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              610   e-172
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   610   e-172
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   604   e-170
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     603   e-169
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   603   e-169
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...   602   e-169
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   601   e-169
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   599   e-168
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   581   e-163
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   576   e-161
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   574   e-161
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   574   e-161
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      563   e-157
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   563   e-157
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   553   e-154
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   553   e-154
ref|XP_007203880.1| hypothetical protein PRUPE_ppa006657mg [Prun...   551   e-154
ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arab...   547   e-153
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   545   e-152

>gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus guttatus]
          Length = 589

 Score =  678 bits (1750), Expect = 0.0
 Identities = 378/601 (62%), Positives = 426/601 (70%), Gaps = 11/601 (1%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXV--L 1905
            MSCLLPQFKCSPDTFAVNF            SR++INFRTQC+L               L
Sbjct: 1    MSCLLPQFKCSPDTFAVNFKSQTLFTVHSSKSRESINFRTQCVLSTTSPPPTMAATTTLL 60

Query: 1904 ELEKLQLSW---------RXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAV 1752
            E EKLQLS                     ++ L+L+K+ SL     P  + +TLTYVG+V
Sbjct: 61   EFEKLQLSPLETIPNSLPADRSWTTPRAKTSLLDLDKLTSL-----PVASNKTLTYVGSV 115

Query: 1751 GPPSEIHLGPNMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXX 1572
            GPPSEI+LG N+D+  L+TS++ VIT                    +MM+SLH       
Sbjct: 116  GPPSEINLGANLDKEALITSDEAVITAAASEALALAKAAVKVAKDAAMMVSLHRSTKPDT 175

Query: 1571 XXTGVLPEVDNHPVETIFREAKVGDIGLSEKFLASDPVAEPDEVEPXXXXXXXXXXXXXX 1392
                   EVD      + REA++G     +  L        D  EP              
Sbjct: 176  KS---FLEVDTSAERVVVREAEIGSGENDDHVLGESD----DSEEPSAEELELLDLQLSS 228

Query: 1391 SIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTS 1212
            SIAVRSKRQ               +N+                QE+DYSDPLRYLR TTS
Sbjct: 229  SIAVRSKRQIERKVRRGRAAEKAAANVVSVKSGSSKKKRSPV-QEVDYSDPLRYLRATTS 287

Query: 1211 SSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNY 1032
            S+RLLTASEEQ+LSEGIQVLLK+E+LQ EL +RFG  P+++QWAAAAGVDQKTLR+Q+NY
Sbjct: 288  STRLLTASEEQVLSEGIQVLLKLERLQVELIERFGGEPSYSQWAAAAGVDQKTLREQINY 347

Query: 1031 GVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYA 852
            G+LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG+EKFDA+KGFKFSTYA
Sbjct: 348  GILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYA 407

Query: 851  HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSM 672
            HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL+SENG+VPNDEEVAEATGLSM
Sbjct: 408  HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRVPNDEEVAEATGLSM 467

Query: 671  KRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTL 492
            KRLSAVMLTPK PRSLDQKIG+NQDLKPS+VI+DPEAETSEELLIKQFM+QDLA VLD+L
Sbjct: 468  KRLSAVMLTPKPPRSLDQKIGVNQDLKPSEVISDPEAETSEELLIKQFMKQDLADVLDSL 527

Query: 491  NPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 312
            NPREKQVV WRFG+EDGRMKTLQEIGELMGVSRER+RQIESCAFRKLKNKKRTK LQQYV
Sbjct: 528  NPREKQVVKWRFGIEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKKRTKQLQQYV 587

Query: 311  M 309
            M
Sbjct: 588  M 588


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  610 bits (1573), Expect = e-172
 Identities = 342/602 (56%), Positives = 401/602 (66%), Gaps = 11/602 (1%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXV-LE 1902
            MSCLLPQFKC PDTF+ +             +R+ I FR QC L              L+
Sbjct: 1    MSCLLPQFKCPPDTFSTH-----PKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLD 55

Query: 1901 LEKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGP 1722
            +EKL+L                      PSL++H     A R  TY+G VGPP+E +   
Sbjct: 56   IEKLRL----------------------PSLESHSNSVAAHRPWTYIGVVGPPTEANFEA 93

Query: 1721 NMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVD 1542
             +    LLTSE+ VI                     + ++  +            L   D
Sbjct: 94   TLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDD 153

Query: 1541 NHPVETI-FREAK----VGD-----IGLSEKFLASDPVAEPDEVEPXXXXXXXXXXXXXX 1392
                  I F E +    +GD      G+ +     D   + D++EP              
Sbjct: 154  TSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSK 213

Query: 1391 SIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTS 1212
            SI VRS RQ               + +               +QE+DYSDPLRYLRGTTS
Sbjct: 214  SIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTS 273

Query: 1211 SSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNY 1032
            +SRLLTA+EE  LSEGIQ LLK+EKLQ++L +RFG  PTFAQWAAAAGVDQKTLR++ NY
Sbjct: 274  TSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNY 333

Query: 1031 GVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYA 852
            G+ CKDKMIKSNIRLVISIAKNYQGAGMN+QDLVQEGCRGLVRG+EKFDASKGFKFSTYA
Sbjct: 334  GIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 393

Query: 851  HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSM 672
            HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PN+EEVAEATGLSM
Sbjct: 394  HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSM 453

Query: 671  KRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTL 492
            KRL+AV+LTPKAPRSLDQKIG+NQ+LKPS+VIADP+AET+EELLIKQFMR+DL KVL++L
Sbjct: 454  KRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSL 513

Query: 491  NPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 312
            NPREKQV+ WR+GLEDGR KTLQEIGELMGVSRERIRQIESCAFRKLKNK+RTKHLQQY+
Sbjct: 514  NPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYL 573

Query: 311  MA 306
            ++
Sbjct: 574  VS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  610 bits (1573), Expect = e-172
 Identities = 342/602 (56%), Positives = 401/602 (66%), Gaps = 11/602 (1%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXV-LE 1902
            MSCLLPQFKC PDTF+ +             +R+ I FR QC L              L+
Sbjct: 1    MSCLLPQFKCPPDTFSTH--PKLHILCKSPKNREAIYFRVQCALSTTSPPLSTSTTAVLD 58

Query: 1901 LEKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGP 1722
            +EKL+L                      PSL++H     A R  TY+G VGPP+E +   
Sbjct: 59   IEKLRL----------------------PSLESHSNSVAAHRPWTYIGVVGPPTEANFEA 96

Query: 1721 NMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVD 1542
             +    LLTSE+ VI                     + ++  +            L   D
Sbjct: 97   TLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDD 156

Query: 1541 NHPVETI-FREAK----VGD-----IGLSEKFLASDPVAEPDEVEPXXXXXXXXXXXXXX 1392
                  I F E +    +GD      G+ +     D   + D++EP              
Sbjct: 157  TSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSK 216

Query: 1391 SIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTS 1212
            SI VRS RQ               + +               +QE+DYSDPLRYLRGTTS
Sbjct: 217  SIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTS 276

Query: 1211 SSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNY 1032
            +SRLLTA+EE  LSEGIQ LLK+EKLQ++L +RFG  PTFAQWAAAAGVDQKTLR++ NY
Sbjct: 277  TSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNY 336

Query: 1031 GVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYA 852
            G+ CKDKMIKSNIRLVISIAKNYQGAGMN+QDLVQEGCRGLVRG+EKFDASKGFKFSTYA
Sbjct: 337  GIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 396

Query: 851  HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSM 672
            HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PN+EEVAEATGLSM
Sbjct: 397  HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSM 456

Query: 671  KRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTL 492
            KRL+AV+LTPKAPRSLDQKIG+NQ+LKPS+VIADP+AET+EELLIKQFMR+DL KVL++L
Sbjct: 457  KRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSL 516

Query: 491  NPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 312
            NPREKQV+ WR+GLEDGR KTLQEIGELMGVSRERIRQIESCAFRKLKNK+RTKHLQQY+
Sbjct: 517  NPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYL 576

Query: 311  MA 306
            ++
Sbjct: 577  VS 578


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  604 bits (1558), Expect = e-170
 Identities = 343/619 (55%), Positives = 395/619 (63%), Gaps = 28/619 (4%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXV-LE 1902
            MS LLPQF   PD F +              SRD+I+ RTQCIL              L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 1901 LEKLQL--------------SWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTY 1764
            +EKLQL              SW+             ++  K+PS + +      +R  TY
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPG--IQKLKLPSFEANPDSVAPDRPWTY 118

Query: 1763 VGAVGPPSEIHLGPNMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXX 1584
             GAVGPP+E +  P     + L SE+ ++                      M++  +   
Sbjct: 119  TGAVGPPAEANTKPE----DSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLK 174

Query: 1583 XXXXXXTGVLPEVDNHPVETIF-------------REAKVGDIGLSEKFLASDPVAEPDE 1443
                   G L E    P E++               E    ++  +   L  D + + D+
Sbjct: 175  DSDNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTDSDD 234

Query: 1442 VEPXXXXXXXXXXXXXXSIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXV 1263
            +EP               IAV+S RQ               +N+               V
Sbjct: 235  LEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKRASV 294

Query: 1262 QEIDYSDPLRYLRGTTSSSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQW 1083
            Q++DYSDPLRYLRGTT SSRLLTASEEQ LS GIQ LLK+E+LQ ELT+R G  PTF QW
Sbjct: 295  QDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQW 354

Query: 1082 AAAAGVDQKTLRKQLNYGVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 903
            AAAAGVDQ TLRK+LNYG+LCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVR
Sbjct: 355  AAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 414

Query: 902  GSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSEN 723
            G+EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL +EN
Sbjct: 415  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTEN 474

Query: 722  GKVPNDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEEL 543
            G+ PND EVAEATGLSMKRL+AVMLTPKAPRSLDQK+G N+ LKPS+V+ADP+AETSEE+
Sbjct: 475  GRHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSEEI 534

Query: 542  LIKQFMRQDLAKVLDTLNPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 363
            L KQFMRQDL KVLDTLNPREKQVV WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA
Sbjct: 535  LTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 594

Query: 362  FRKLKNKKRTKHLQQYVMA 306
            FRKLKNKKRTK LQQY+ A
Sbjct: 595  FRKLKNKKRTKFLQQYINA 613


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  603 bits (1555), Expect = e-169
 Identities = 330/591 (55%), Positives = 394/591 (66%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXVLEL 1899
            MSCLLPQF C PDTF+  F                 NFRT   L            +  L
Sbjct: 1    MSCLLPQFNCKPDTFSAQF-----------------NFRTHS-LPTPNSHLPKARDINSL 42

Query: 1898 EKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGPN 1719
             +  LS              ++E  + PSLD +     + R  TY GA GPP E +    
Sbjct: 43   AQCVLSTTSPSTSVGATYVLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEAT 102

Query: 1718 MDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVDN 1539
            +    LLTSE+ VI                     ++++            +     +  
Sbjct: 103  LATETLLTSEEAVIAAAAAEAVTLAKAAVKVAKDAALLVRPSTRAESISLVSSEARNIKT 162

Query: 1538 HPVETIFREAKVGDIGLSEKFLASDPVAEPDEVEPXXXXXXXXXXXXXXSIAVRSKRQPX 1359
                +  R++   ++ L E     D   E ++++P              SIAVRS+RQ  
Sbjct: 163  AQAASRVRDSLRAEMALIEDHPPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSE 222

Query: 1358 XXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTSSSRLLTASEEQ 1179
                         +N+               VQ++D+SDPLRYLR TTS+SRLLTA+EE 
Sbjct: 223  RKAKRDRAAEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEI 282

Query: 1178 LLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNYGVLCKDKMIKS 999
             LSEGIQ LLK+EKLQ+EL +R G PPTFAQWAAAAGVDQKTLR+++NYG+LCKDKMIKS
Sbjct: 283  ELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKS 342

Query: 998  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKS 819
            N+RLVISIAKNYQGAGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKS
Sbjct: 343  NVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 402

Query: 818  LSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPK 639
            LSDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PNDEEVAEATGLSMKRL+AV+LTPK
Sbjct: 403  LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPK 462

Query: 638  APRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTLNPREKQVVSWR 459
            APRSL+QKIG+NQ+LKPS++IADP+AET E++L +QFM+QDL KVLD+LN REKQV+ WR
Sbjct: 463  APRSLEQKIGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWR 522

Query: 458  FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMA 306
            FG++DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+++
Sbjct: 523  FGMDDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLIS 573


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  603 bits (1554), Expect = e-169
 Identities = 342/612 (55%), Positives = 406/612 (66%), Gaps = 13/612 (2%)
 Frame = -1

Query: 2105 IYTCVYRIRMSCLLPQFKCSPDTFAVNF---XXXXXXXXXXXXSRDTINFRTQCIL-XXX 1938
            I T  +   MSCLLPQFKC PDTF+++F               S++ I FRT C+L    
Sbjct: 15   ISTSSFNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTS 74

Query: 1937 XXXXXXXXXVLELEKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVG 1758
                     VL++EKL+L                      PSL+ H     A R  TY G
Sbjct: 75   PSTSTAMTTVLDVEKLRL----------------------PSLEAHSNAVAANRQWTYFG 112

Query: 1757 AVGPPSEIHLGPNMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLH----- 1593
            AVGP +E +LG ++  T  LTS++ VI                     ++M++ H     
Sbjct: 113  AVGPSTEENLGTSL-ATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSAKP 171

Query: 1592 ----XXXXXXXXXTGVLPEVDNHPVETIFREAKVGDIGLSEKFLASDPVAEPDEVEPXXX 1425
                         T +  ++      +I  ++ + +    E++    P+ +  ++EP   
Sbjct: 172  KSKPAISLSADTNTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHE 231

Query: 1424 XXXXXXXXXXXSIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYS 1245
                       SIAVRS+RQ               +N+               VQE+DYS
Sbjct: 232  ELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYS 291

Query: 1244 DPLRYLRGTTSSSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGV 1065
            DPLRYLR TTSSSRLLTA+EE  LS GIQ LLK+E L++ L++R G  PTFAQWAAAAGV
Sbjct: 292  DPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGV 351

Query: 1064 DQKTLRKQLNYGVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFD 885
            DQ+ LR++LNYG+LCKDKMI SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG+EKFD
Sbjct: 352  DQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 411

Query: 884  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPND 705
            ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PN+
Sbjct: 412  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNN 471

Query: 704  EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFM 525
            EEVAEATGLSMKRL AV+LTPKAPRSLDQK G+NQ+LKPS+VIADPEAET+E+LLIK+FM
Sbjct: 472  EEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFM 531

Query: 524  RQDLAKVLDTLNPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 345
            ++DL KVLDTLNPRE+QVV WRFGLEDGRMKTLQEIGELMGVSRERIRQIES AFRKLKN
Sbjct: 532  KEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKN 591

Query: 344  KKRTKHLQQYVM 309
            KKRTKHL QY +
Sbjct: 592  KKRTKHLMQYAI 603


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
            gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
            [Theobroma cacao]
          Length = 623

 Score =  602 bits (1553), Expect = e-169
 Identities = 349/643 (54%), Positives = 410/643 (63%), Gaps = 52/643 (8%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXS---------------------------- 1983
            MSCLLPQFKC PDTF++ F            +                            
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIFV 60

Query: 1982 -----RDTINFRTQCILXXXXXXXXXXXXV-LELEKLQLSWRXXXXXXXXXXSATLELEK 1821
                 ++ I FRTQC+L              L++EKL+L                     
Sbjct: 61   VLAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRL--------------------- 99

Query: 1820 VPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGPNMDETNLLTSEDTVITXXXXXXXXXXX 1641
             PS + H      +R  TY+GA GPPSE  LG  +   NLLTS++ VI            
Sbjct: 100  -PSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALAR 158

Query: 1640 XXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVDNHPVE-TIFREAK----VGDIGLSEKF 1476
                     ++M   +         +GV    D+   +  +F EA+    +GD    E  
Sbjct: 159  AAVKVAKDAALMAE-NYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGIIGDSPTDESE 217

Query: 1475 LASDP-----VAEPDEVEPXXXXXXXXXXXXXXSIAVRSKRQPXXXXXXXXXXXXXXSNI 1311
            +  D        E DE+EP              SIAVRS+RQ               +N+
Sbjct: 218  MEEDDSEQNSTTESDELEPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANV 277

Query: 1310 XXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTSSSRLLTASEEQLLSEGIQVLLKMEKLQ 1131
                           +Q++DYSDPLRYLRGTTS+SRLLTA+EE  LSEGIQ LLK+E+LQ
Sbjct: 278  VSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQ 337

Query: 1130 DELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNYGVLCKDKMIKSNIRLVISIAKNYQGAG 951
            +EL +R G  PTFAQWAAAAGVDQKTLR +LNYGV CKDKMIKSNIRLVISIAKNYQGAG
Sbjct: 338  EELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAG 397

Query: 950  MNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 771
            MNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
Sbjct: 398  MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 457

Query: 770  ATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGMNQDLK 591
            ATYRVKEARKQL+SENG+ P++EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIG+NQ+LK
Sbjct: 458  ATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLK 517

Query: 590  PS--------DVIADPEAETSEELLIKQFMRQDLAKVLDTLNPREKQVVSWRFGLEDGRM 435
            PS        +VIADPEAET+E++LIKQFMR+DL KVLD+L+ RE+QV+ WRFG+EDGRM
Sbjct: 518  PSVCPVSSLAEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRM 577

Query: 434  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMA 306
            KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+++
Sbjct: 578  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLLS 620


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  601 bits (1549), Expect = e-169
 Identities = 343/619 (55%), Positives = 392/619 (63%), Gaps = 28/619 (4%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXV-LE 1902
            MS LLPQF   PD F +              SRD I+ RTQCIL              L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 1901 LEKLQL--------------SWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTY 1764
            +EKLQL              SW+             ++  K+PS + +      +R  TY
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPD--IQKLKLPSFEANPDSVAPDRPWTY 118

Query: 1763 VGAVGPPSEIHLGPNMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXX 1584
             GAVGPP+E +  P     N L SE+ ++                      M++  +   
Sbjct: 119  TGAVGPPAEANTKPE----NSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLN 174

Query: 1583 XXXXXXTGVLPEVDNHPVETIF-------------REAKVGDIGLSEKFLASDPVAEPDE 1443
                   G L E    P E++               E    ++  +   L  + + + D+
Sbjct: 175  DSDNVGRGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRETLTDSDD 234

Query: 1442 VEPXXXXXXXXXXXXXXSIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXV 1263
            +EP               IAV+S RQ               +N+               V
Sbjct: 235  LEPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRASV 294

Query: 1262 QEIDYSDPLRYLRGTTSSSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQW 1083
            Q++DYSDPLRYLRGTT SSRLLTASEEQ LS GIQ LLK+E+LQ ELT+R G  PTF QW
Sbjct: 295  QDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQW 354

Query: 1082 AAAAGVDQKTLRKQLNYGVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 903
            AAAAGVDQ TLRK+LNYG+LCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVR
Sbjct: 355  AAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVR 414

Query: 902  GSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSEN 723
            G+EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQL +EN
Sbjct: 415  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTEN 474

Query: 722  GKVPNDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEEL 543
            G+ PND EVAEA GLSMKRL+AVMLTPKAPRSLDQKIG N+ LKPS+V+ADPEAETSEE+
Sbjct: 475  GRHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSEEI 534

Query: 542  LIKQFMRQDLAKVLDTLNPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 363
            L KQFMRQDL KVLDTLNPREKQVV WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA
Sbjct: 535  LTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 594

Query: 362  FRKLKNKKRTKHLQQYVMA 306
            FRKLKNKKRTK LQQY+ A
Sbjct: 595  FRKLKNKKRTKFLQQYINA 613


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  599 bits (1545), Expect = e-168
 Identities = 337/612 (55%), Positives = 402/612 (65%), Gaps = 13/612 (2%)
 Frame = -1

Query: 2105 IYTCVYRIRMSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXS---RDTINFRTQCILXXXX 1935
            I T  +   MSCLLPQFKC PDTF+++F                ++ I FRT C+L    
Sbjct: 15   ISTSSFNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTS 74

Query: 1934 XXXXXXXXV-LELEKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVG 1758
                      L++EKL+L                      PSL+ H     A R  TY G
Sbjct: 75   PSTSTAMTTVLDVEKLRL----------------------PSLEAHSNAVAANRQWTYFG 112

Query: 1757 AVGPPSEIHLGPNMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXX 1578
            AVGP +E +LG ++  T  LTS++ VI                     ++M++ H     
Sbjct: 113  AVGPSTEENLGTSL-ATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSAKP 171

Query: 1577 XXXXT---------GVLPEVDNHPVETIFREAKVGDIGLSEKFLASDPVAEPDEVEPXXX 1425
                           +  ++      +I  ++ + +    E++    P+ +  ++EP   
Sbjct: 172  KSKPAISLSADTSTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHE 231

Query: 1424 XXXXXXXXXXXSIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYS 1245
                       SIAVRS+RQ               +N+               VQE+DYS
Sbjct: 232  ELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTTRRKRPSVQEVDYS 291

Query: 1244 DPLRYLRGTTSSSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGV 1065
            DPLRYLR TTSSSRLLTA+EE  LS GIQ LLK+E L++ L++R G  PTFAQWAAAAGV
Sbjct: 292  DPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGV 351

Query: 1064 DQKTLRKQLNYGVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFD 885
            DQ+ LR++LNYG+LCKDKMI SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG+EKFD
Sbjct: 352  DQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 411

Query: 884  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPND 705
            ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PN+
Sbjct: 412  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNN 471

Query: 704  EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFM 525
            EEVA+ATGLSMKRL AV+L PKAPRSLDQK G+NQ+LKPS+VIADPEAET+E+LLIK+FM
Sbjct: 472  EEVAKATGLSMKRLHAVLLAPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFM 531

Query: 524  RQDLAKVLDTLNPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 345
            ++DL KVLDTLNPRE+QVV WRFGLEDGRMKTLQEIGELMGVSRERIRQIES AFRKLKN
Sbjct: 532  KEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKN 591

Query: 344  KKRTKHLQQYVM 309
            KKRTKHL QY +
Sbjct: 592  KKRTKHLMQYAI 603


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  581 bits (1497), Expect = e-163
 Identities = 314/519 (60%), Positives = 369/519 (71%), Gaps = 9/519 (1%)
 Frame = -1

Query: 1835 LELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGPNMDETNLLTSEDTVITXXXXXX 1656
            +E   +PSL  +    +  R  TY GA+GPP+E + G  +    LLTSE+ VI       
Sbjct: 98   MEEFSLPSLTVNSDSLIVNRPWTYTGAIGPPTEANYGAALATETLLTSEEAVIAAAAAEA 157

Query: 1655 XXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVDNHPVETIFREA----KVGDIGL 1488
                          ++++S +                  H       E     ++GD   
Sbjct: 158  VTLAKAALKVAKDVALLVSNNHYAKVENSSPVSCGTSAFHINWAQHLETEPTLRIGDSMA 217

Query: 1487 SEKFLASD-----PVAEPDEVEPXXXXXXXXXXXXXXSIAVRSKRQPXXXXXXXXXXXXX 1323
            SE  L  D      + E + VEP               IA RS RQ              
Sbjct: 218  SETALVEDHFLQIAINESENVEPANEEFELLQEQLSNGIAARSSRQTERKARRTRAAEKA 277

Query: 1322 XSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTSSSRLLTASEEQLLSEGIQVLLKM 1143
             ++I               +Q++D+SDPLRYLR TT +SRLLTA+EE  LSEGIQ LLK+
Sbjct: 278  AASIVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKL 337

Query: 1142 EKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNYGVLCKDKMIKSNIRLVISIAKNY 963
            EKLQ++L QR G+ PTFAQWAAAAGVDQKTLRK++NYG++CKDKMIKSNIRLVISIAKNY
Sbjct: 338  EKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGIMCKDKMIKSNIRLVISIAKNY 397

Query: 962  QGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 783
            QGAGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 398  QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 457

Query: 782  HMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGMN 603
            HMVEATYRV+EA+KQL+S NG+ PNDEEVAEATGLSMKRL+AV+LTPKAPRSL+QKIG+N
Sbjct: 458  HMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGIN 517

Query: 602  QDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTLNPREKQVVSWRFGLEDGRMKTLQ 423
            Q+LKPSDVIADP+AET+E+LL+K+FM+QDL KVLD+LNPREKQV+ WRFG+EDGRMKTLQ
Sbjct: 518  QNLKPSDVIADPDAETAEDLLMKKFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQ 577

Query: 422  EIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMA 306
            EIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV++
Sbjct: 578  EIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVLS 616


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  576 bits (1485), Expect = e-161
 Identities = 315/520 (60%), Positives = 372/520 (71%), Gaps = 11/520 (2%)
 Frame = -1

Query: 1835 LELEKV--PSLDTHQIPFVAERTLTYVGAVGPPSEIHLGPNMDETNLLTSEDTVITXXXX 1662
            L++EK+  PSL+ H     A R  TY GAVGP +E +LG ++  T  LTS++ VI     
Sbjct: 5    LDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSL-ATETLTSDEAVIAAASA 63

Query: 1661 XXXXXXXXXXXXXXXXSMMISLH---------XXXXXXXXXTGVLPEVDNHPVETIFREA 1509
                            ++M++ H                  T +  ++      +I  ++
Sbjct: 64   EAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQLTERERASIIGDS 123

Query: 1508 KVGDIGLSEKFLASDPVAEPDEVEPXXXXXXXXXXXXXXSIAVRSKRQPXXXXXXXXXXX 1329
             + +    E++    P+ +  ++EP              SIAVRS+RQ            
Sbjct: 124  VIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAE 183

Query: 1328 XXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTSSSRLLTASEEQLLSEGIQVLL 1149
               +N+               VQE+DYSDPLRYLR TTSSSRLLTA+EE  LS GIQ LL
Sbjct: 184  KAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLL 243

Query: 1148 KMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNYGVLCKDKMIKSNIRLVISIAK 969
            K+E L++ L++R G  PTFAQWAAAAGVDQ+ LR++LNYG+LCKDKMI SNIRLVISIAK
Sbjct: 244  KLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAK 303

Query: 968  NYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 789
            NYQGAGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL
Sbjct: 304  NYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 363

Query: 788  PFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIG 609
            PFHMVEATYRVKEARKQL+SENG+ PN+EEVAEATGLSMKRL AV+LTPKAPRSLDQK G
Sbjct: 364  PFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFG 423

Query: 608  MNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTLNPREKQVVSWRFGLEDGRMKT 429
            +NQ+LKPS+VIADPEAET+E+LLIK+FM++DL KVLDTLNPRE+QVV WRFGLEDGRMKT
Sbjct: 424  INQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKT 483

Query: 428  LQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 309
            LQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 484  LQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 523


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  574 bits (1480), Expect = e-161
 Identities = 333/612 (54%), Positives = 402/612 (65%), Gaps = 21/612 (3%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXS----------RDTINFRTQCILXXXXXX 1929
            MSCLLPQFKC P+TF++ F                       RD  + RTQCIL      
Sbjct: 1    MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPP 60

Query: 1928 XXXXXXV-LELEKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAV 1752
                    L++++L                      K+P  DT+      ER  +Y+GAV
Sbjct: 61   TSTGTATTLDVDRL----------------------KLPPFDTNTDSVSVERLRSYLGAV 98

Query: 1751 GPPSEIHLGPNMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXX 1572
                E  L      + LLTSE+  I                     +++ + +       
Sbjct: 99   ----ESSLA-----STLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLAN-NINSSRAG 148

Query: 1571 XXTGVLPEVDN-HPVETIFREAKVGDI-----GLSEKFLASDPV----AEPDEVEPXXXX 1422
              +   P+ D  H     F E++  DI     G++++ +  D +     E D++EP    
Sbjct: 149  TKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEE 208

Query: 1421 XXXXXXXXXXSIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSD 1242
                      SI V+SKRQ               +++               VQE+DYSD
Sbjct: 209  LELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSD 268

Query: 1241 PLRYLRGTTSSSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVD 1062
            PLRYLR TT++SRLLTA+EE  LSEGIQ LLK+E+LQ+EL +R+G+ PTFAQWAAAAGV+
Sbjct: 269  PLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVN 328

Query: 1061 QKTLRKQLNYGVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDA 882
            Q+TLRK+LNYG LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG+EKFDA
Sbjct: 329  QRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 388

Query: 881  SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDE 702
            SKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL  ENG+ P+D+
Sbjct: 389  SKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDK 448

Query: 701  EVAEATGLSMKRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMR 522
            E+AEA GLSMKRL+AV++TPKAPRSL+QKIG+NQ+LKPS+VI+DPEAET E++LIKQFM+
Sbjct: 449  EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMK 508

Query: 521  QDLAKVLDTLNPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNK 342
            QDL KVLD+LNPREKQV+ WRFG+EDGRMKTLQEIGE+MGVSRERIRQIESCAFRKLKNK
Sbjct: 509  QDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK 568

Query: 341  KRTKHLQQYVMA 306
            KRTKHLQQYVM+
Sbjct: 569  KRTKHLQQYVMS 580


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  574 bits (1480), Expect = e-161
 Identities = 331/601 (55%), Positives = 384/601 (63%), Gaps = 10/601 (1%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXS---RDTINFRTQCILXXXXXXXXXXXXV 1908
            MSCLLPQFKC PDTF+++F            S   R+ I +R QCIL             
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTAV-- 59

Query: 1907 LELEKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEIHL 1728
            L+LEKL+L                      PS +            TY            
Sbjct: 60   LDLEKLRL----------------------PSFEAPSDSIAPNSPWTYAT---------F 88

Query: 1727 GPNMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVL-- 1554
            G  +    L+TS++ VI                     ++++            T     
Sbjct: 89   GSTLATETLITSDEAVIAAAAAEAVALARAAVKVAKDAALLVKNFPSAETESKLTSPSTI 148

Query: 1553 -----PEVDNHPVETIFREAKVGDIGLSEKFLASDPVAEPDEVEPXXXXXXXXXXXXXXS 1389
                 P+        I  ++   + G  E+      + E D +E                
Sbjct: 149  DASRWPQFTETERARIIGDSVATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEG 208

Query: 1388 IAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTSS 1209
            IAVRS+RQ               S++               +QE+DYSDPLRYLRGTTS+
Sbjct: 209  IAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTST 268

Query: 1208 SRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNYG 1029
            SRLLTASEE  LS  IQ LLK+E+LQ+EL +R+G  PTFAQWAAAAGVDQ+TLRK++N+G
Sbjct: 269  SRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHG 328

Query: 1028 VLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAH 849
             +CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAH
Sbjct: 329  TICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH 388

Query: 848  WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMK 669
            WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ P+DEEVAEA GLSMK
Sbjct: 389  WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMK 448

Query: 668  RLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTLN 489
            RLSAV+LTPKAPRSLDQKIGMN DLKPS+VIADPEAET+EELL+KQFM+QDL KVL+TLN
Sbjct: 449  RLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLN 508

Query: 488  PREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 309
            PRE QVV WRFGLEDGRMKTLQEIGE+MGVSRERIRQIES AFRKLKNKKRTK L+QY++
Sbjct: 509  PRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYLL 568

Query: 308  A 306
            A
Sbjct: 569  A 569


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  563 bits (1451), Expect = e-157
 Identities = 322/598 (53%), Positives = 381/598 (63%), Gaps = 9/598 (1%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXS----RDTINFRTQCILXXXXXXXXXXXX 1911
            M+CLLPQFKC PDTF+++             S    RD + FR QC +            
Sbjct: 1    MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60

Query: 1910 VL-ELEKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEI 1734
             + ++EKL+L                      P ++++     A    T++  +G P+E+
Sbjct: 61   SIFDVEKLRL----------------------PYVESNSNSLSAFAQSTFLSTLGSPAEV 98

Query: 1733 HLGPNMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVL 1554
                 +    L+ +E+ VI                     ++M              G  
Sbjct: 99   KFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQS 158

Query: 1553 PEVDNHPVETIFREAKVGDI----GLSEKFLASDPVAEPDEVEPXXXXXXXXXXXXXXSI 1386
                      +    +VG +    G        D V+EP ++EP              SI
Sbjct: 159  LHFSG---AQLLENEQVGSMRNFEGSENSLREGDTVSEPADMEPTIEELQLLEVELDESI 215

Query: 1385 AVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTSSS 1206
             VRS RQ               SN+               VQE+DYSDPLRYLRG T+SS
Sbjct: 216  TVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSS 275

Query: 1205 RLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNYGV 1026
            RLLT+SEE  LS GIQ LLK+EKL DEL  RFG  P+F QWAAAAG+DQ+TLR++LN+G 
Sbjct: 276  RLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWAAAAGIDQRTLRRRLNHGT 335

Query: 1025 LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHW 846
             CKDKMIKSN+RLVISIAKNYQG+GMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHW
Sbjct: 336  FCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 395

Query: 845  WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKR 666
            WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL SENGK PN+EEVAEATGLSMKR
Sbjct: 396  WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKR 455

Query: 665  LSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTLNP 486
            L+AV++TPKAPRSLDQKIG N +LKPS+VIADPEAET+E+LL KQFMRQDL KVLDTL+ 
Sbjct: 456  LTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSS 515

Query: 485  REKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 312
            REKQV+ WRFGLEDGRMKTLQEIGELMGVSRERIRQIES AFRKL+NKK+T +LQQY+
Sbjct: 516  REKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINLQQYM 573


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  563 bits (1450), Expect = e-157
 Identities = 318/603 (52%), Positives = 384/603 (63%), Gaps = 12/603 (1%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXVLEL 1899
            MSCLLPQFKC PDTF+V+F                     QC+L             L+L
Sbjct: 1    MSCLLPQFKCQPDTFSVHFRNLQHHGTNHTQL-------PQCVLSSASPSTAV----LDL 49

Query: 1898 EKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGPN 1719
            EKL+L                      PSL+ H     A R  TY+G +GP  +   G +
Sbjct: 50   EKLRL----------------------PSLEPHSDSISANRPWTYIGGIGPQKKPPFGTS 87

Query: 1718 MDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMM------------ISLHXXXXXX 1575
            +    L+ +++ VI                     + M            I +       
Sbjct: 88   LAAETLIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSFMKKETKIPIASTTDSF 147

Query: 1574 XXXTGVLPEVDNHPVETIFREAKVGDIGLSEKFLASDPVAEPDEVEPXXXXXXXXXXXXX 1395
                 +L E +      I  ++   +  L E++    P  E D +EP             
Sbjct: 148  SSMWSLLTEKER---ADIIGDSVSAETRLREEYSVQYPTEEYDCLEPTQEELALLQKQLS 204

Query: 1394 XSIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTT 1215
              IAVRSKRQ               +N+               +QE+D SDPLR+ RG +
Sbjct: 205  EGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQEVDQSDPLRFFRGAS 264

Query: 1214 SSSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLN 1035
            SSSRLL+A+EE  LSEGIQ LLK+E++++EL +RFG  P+FAQWAAAAGVDQ TLRK+LN
Sbjct: 265  SSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAAAAGVDQLTLRKRLN 324

Query: 1034 YGVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTY 855
            YG+LCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTY
Sbjct: 325  YGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 384

Query: 854  AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLS 675
            AHWWIKQAVRKSLSD+SRTIRLPFHMV+ATYRVKEARKQL+SENG+ P+D+EVAEA GLS
Sbjct: 385  AHWWIKQAVRKSLSDRSRTIRLPFHMVDATYRVKEARKQLYSENGRHPDDKEVAEAAGLS 444

Query: 674  MKRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDT 495
            MKRLSAV+LTPKAPRSLDQK+G N DLK S+V ADPEAET+E+LL+K+FM++DLAKVL +
Sbjct: 445  MKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLAKVLGS 504

Query: 494  LNPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY 315
            L+PRE QVV WRFG+EDGRMKTLQEIGELMGVSRER+RQIE  AFRKLKNK RTK L+QY
Sbjct: 505  LSPRENQVVRWRFGMEDGRMKTLQEIGELMGVSRERVRQIELSAFRKLKNKNRTKQLRQY 564

Query: 314  VMA 306
            ++A
Sbjct: 565  MVA 567


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  553 bits (1425), Expect = e-154
 Identities = 312/601 (51%), Positives = 387/601 (64%), Gaps = 10/601 (1%)
 Frame = -1

Query: 2078 MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXVLEL 1899
            MSCLLP F C  DTF  +             +R  + F+ QC+L                
Sbjct: 1    MSCLLPHFNCHLDTFRTH---PYALPTHLSKTRPNLCFQPQCVLSATSPS---------- 47

Query: 1898 EKLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGPN 1719
                                 L LEK  +LD    P     +  Y+ AV PP + +    
Sbjct: 48   -------------------TLLSLEKKLALDAPSDP---NTSWPYIAAVSPPLQANFKST 85

Query: 1718 MDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVDN 1539
            +   +LLT+E+ VI                     ++++              V  + D+
Sbjct: 86   LSAESLLTNEEAVIVAAASEALALAKAAAKVAKDAALLVKKKPPAEAEYKSH-VSSKSDD 144

Query: 1538 HPVETIFREAKVGDIGLSEKFLAS----------DPVAEPDEVEPXXXXXXXXXXXXXXS 1389
              ++   +  +V D G++E+ + +           P  E  ++EP              S
Sbjct: 145  LLLKWFKQMEEVED-GVAEESMGAGAEIMEGVDVSPSEEESDLEPSHEELERLQEQLSDS 203

Query: 1388 IAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTSS 1209
            IAVRS+RQ               +N                +QE+DYSDPLRYLR TTS+
Sbjct: 204  IAVRSRRQTERKAKRVRATEKATTNFTSFKPGSSSRRKRVSMQEVDYSDPLRYLRTTTSA 263

Query: 1208 SRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNYG 1029
            SRLLT +EE  LS GIQ LLK+EK+Q++L +RFGS PTFAQWAA AGVDQKTLRK+LNYG
Sbjct: 264  SRLLTPTEEIKLSAGIQDLLKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLNYG 323

Query: 1028 VLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAH 849
            + CKDKMIKSNIRLVISIAKNYQG+GMNLQDLVQEGCRGLV+G+EKFD +KGFKFSTYAH
Sbjct: 324  IFCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAH 383

Query: 848  WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMK 669
            WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ P+DEEVAEATGLSMK
Sbjct: 384  WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLSMK 443

Query: 668  RLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTLN 489
            RL+AV++TPKAPRSL+QKIG+NQ+LKPS+VI+DP+AET+EE L+KQFM++DL + LD+LN
Sbjct: 444  RLNAVLMTPKAPRSLEQKIGINQNLKPSEVISDPDAETAEEQLLKQFMKKDLEEALDSLN 503

Query: 488  PREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 309
            PRE+QVV WRFG++DGR KTLQEIGE++GVSRERIRQIES AF+KLKNKKRT HLQQY++
Sbjct: 504  PRERQVVRWRFGMDDGRTKTLQEIGEMLGVSRERIRQIESSAFKKLKNKKRTNHLQQYLV 563

Query: 308  A 306
            +
Sbjct: 564  S 564


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  553 bits (1424), Expect = e-154
 Identities = 320/602 (53%), Positives = 383/602 (63%), Gaps = 12/602 (1%)
 Frame = -1

Query: 2075 SCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXVLELE 1896
            SCLLPQFKC PD+F+++F             +  + F+ QC +             L++ 
Sbjct: 3    SCLLPQFKCQPDSFSIHFRTSFSVSKQN---KGPVFFQPQCAVTTSPALLTST---LDVA 56

Query: 1895 KLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGPNM 1716
            KL+L                      PS DT     +++R  TY G VGP +E      +
Sbjct: 57   KLRL----------------------PSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEAL 94

Query: 1715 DETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVDNH 1536
                LLTS++ V+                     ++  + +              + D  
Sbjct: 95   ASETLLTSDEAVVAAAAAEAVALARAAVKVAKDATLFKNSNNTNLLISSTADKRSKWDQF 154

Query: 1535 PVET---IFREAKVGDIGL---------SEKFLASDPVAEPDEVEPXXXXXXXXXXXXXX 1392
              +    I     V D G+         S K  ++D ++E  EVE               
Sbjct: 155  TEKERAGILGHLAVSDTGIVSDKSTAPASNKESSADLISEIQEVE-------LVEEQPAA 207

Query: 1391 SIAVRSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTS 1212
            S+AVRS RQ               S I                QE+D++DPLRYLR TTS
Sbjct: 208  SLAVRSTRQTERKARRAKGLEKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTS 267

Query: 1211 SSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNY 1032
            SS+LLT  EE  LS GIQ LLK+E+LQ ELT+R G  PTF+QWA+AAGVDQK+LRK++NY
Sbjct: 268  SSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINY 327

Query: 1031 GVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYA 852
            G  CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG+EKFDA+KGFKFSTYA
Sbjct: 328  GTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYA 387

Query: 851  HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSM 672
            HWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQL++E G+ P +EEVAEATGLSM
Sbjct: 388  HWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLSM 447

Query: 671  KRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTL 492
            KRL AV+L+PK PRSLDQKIGMNQ+LKPS+VIADPEAETSE++LIKQFMR+DL KVLD+L
Sbjct: 448  KRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAETSEDILIKQFMREDLDKVLDSL 507

Query: 491  NPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 312
              REKQV+ WRFG+EDGRMKTLQEIGELMGVSRER+RQIES AFRKLKNKKR+ HLQQY+
Sbjct: 508  GTREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERVRQIESSAFRKLKNKKRSNHLQQYL 567

Query: 311  MA 306
            +A
Sbjct: 568  VA 569


>ref|XP_007203880.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
            gi|462399411|gb|EMJ05079.1| hypothetical protein
            PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  551 bits (1420), Expect = e-154
 Identities = 273/319 (85%), Positives = 304/319 (95%)
 Frame = -1

Query: 1262 QEIDYSDPLRYLRGTTSSSRLLTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQW 1083
            Q++D+SDPLRYLR TT +SRLLTA+EE  LSEGIQ LLK+EKLQ+EL QR G  PT AQW
Sbjct: 83   QDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQPTIAQW 142

Query: 1082 AAAAGVDQKTLRKQLNYGVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 903
            AAAAGVDQKTLRK++NYG+LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ+GCRGLVR
Sbjct: 143  AAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGCRGLVR 202

Query: 902  GSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSEN 723
            G+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQL+S N
Sbjct: 203  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVN 262

Query: 722  GKVPNDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEEL 543
            G+ PNDEEVAEATGLSMKRL+AV+LTPKAPRSL+QKIG+NQ+LKPS+VIADPEAET+E++
Sbjct: 263  GRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEDM 322

Query: 542  LIKQFMRQDLAKVLDTLNPREKQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 363
            L+K+FM+QDL KVLD+LN REKQVV WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA
Sbjct: 323  LMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 382

Query: 362  FRKLKNKKRTKHLQQYVMA 306
            FRKLKNKKRTKHLQQYV++
Sbjct: 383  FRKLKNKKRTKHLQQYVVS 401


>ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arabidopsis lyrata subsp.
            lyrata] gi|297335543|gb|EFH65960.1| hypothetical protein
            ARALYDRAFT_470915 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  547 bits (1409), Expect = e-153
 Identities = 313/598 (52%), Positives = 379/598 (63%), Gaps = 8/598 (1%)
 Frame = -1

Query: 2075 SCLLPQFKCSPDTFAVNFXXXXXXXXXXXXSRDTINFRTQCILXXXXXXXXXXXXVLELE 1896
            SCLLPQFKC PD+F+++F             + ++ F+ QC +             L++ 
Sbjct: 3    SCLLPQFKCPPDSFSIHFRTSFCARKHN---KGSVFFQPQCAVSTSPALLTSM---LDVA 56

Query: 1895 KLQLSWRXXXXXXXXXXSATLELEKVPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGPNM 1716
            KL+L                      PS DT     +++R  TY    GP +E      +
Sbjct: 57   KLRL----------------------PSFDTDSDSRISDRQWTYTRTDGPSTEAKYLEAL 94

Query: 1715 DETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVDNH 1536
                LLTS++ V+                     ++  + +              + D  
Sbjct: 95   ASETLLTSDEAVVVAAAAEAVALARAAVKVAKDATLFKNSNNTNLLISSTADKRSKWDQF 154

Query: 1535 PVETIFREAKVGDIGLSEKFLASDPVAEP--------DEVEPXXXXXXXXXXXXXXSIAV 1380
              +   R   +G + +S+  + SD +  P        D                  S+AV
Sbjct: 155  TEKE--RAGILGHLAVSDNGIVSDKITAPASNKESPGDLESEKQEEVELLEEQPSVSLAV 212

Query: 1379 RSKRQPXXXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTSSSRL 1200
            RS RQ               S I                QE+D++DPLRYLR TTSSS+L
Sbjct: 213  RSTRQTERKARRAKGLEKTASGIPSVKTGSNPRKKRLVAQEVDHNDPLRYLRMTTSSSKL 272

Query: 1199 LTASEEQLLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNYGVLC 1020
            LT  EE  LS GIQ LLK+E+LQ ELT+R G  PTFAQWA+AAGVDQK+LRK++++G LC
Sbjct: 273  LTVREEHELSAGIQDLLKLERLQTELTERCGRQPTFAQWASAAGVDQKSLRKRIHHGTLC 332

Query: 1019 KDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWI 840
            KDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG+EKFDA+KGFKFSTYAHWWI
Sbjct: 333  KDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWI 392

Query: 839  KQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLS 660
            KQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQL+SE GK P +EE+AEATGLSMKRL 
Sbjct: 393  KQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLM 452

Query: 659  AVMLTPKAPRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTLNPRE 480
            AV+L+PK PRSLDQKIGMNQ+LKPS+VIADPEA TSE++LIK+FMRQDL KVLD+L  RE
Sbjct: 453  AVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTRE 512

Query: 479  KQVVSWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMA 306
            KQV+ WRFG+EDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR+ HLQQY++A
Sbjct: 513  KQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVA 570


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  545 bits (1404), Expect = e-152
 Identities = 304/531 (57%), Positives = 365/531 (68%), Gaps = 25/531 (4%)
 Frame = -1

Query: 1823 KVPSLDTHQIPFVAERTLTYVGAVGPPSEIHLGPNMDETNLLTSEDTVITXXXXXXXXXX 1644
            +VPSL  H         LTYVG +G   +      +   +LL SE+ +I           
Sbjct: 53   RVPSLGGHSTSVSTHGPLTYVGTIGSQKKTDFEAALVTESLLKSEEAIIAAAAAEAIALA 112

Query: 1643 XXXXXXXXXXSMMISLHXXXXXXXXXTGVLP-----EVDNHPVET-IFR----------- 1515
                      ++M+             G +P     +VD+ P E  I R           
Sbjct: 113  KAAAKLAKDAALMV-------------GSVPPSRSDKVDDFPSEADILRLQRARLTEMER 159

Query: 1514 -----EAKVGDIGLSEKFLASDPVAEPDEV---EPXXXXXXXXXXXXXXSIAVRSKRQPX 1359
                  + +  IG  +K  + + ++ P+E+   +                +AVRS+RQ  
Sbjct: 160  IGSMDGSSIAGIGPRDKHKSVNQLS-PNEMADKQSRENILEALQLQHSQRVAVRSRRQTE 218

Query: 1358 XXXXXXXXXXXXXSNIXXXXXXXXXXXXXXXVQEIDYSDPLRYLRGTTSSSRLLTASEEQ 1179
                         +N                +QEIDYSDPLRYLRGTT+S++LLTA+EE 
Sbjct: 219  RRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLRGTTNSTKLLTATEEL 278

Query: 1178 LLSEGIQVLLKMEKLQDELTQRFGSPPTFAQWAAAAGVDQKTLRKQLNYGVLCKDKMIKS 999
             LSEGIQ LLK+EKL  ELT+RFG  PTF QWAAAAG+DQK LR++L+YG  CKDKMIKS
Sbjct: 279  ELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLSYGTHCKDKMIKS 338

Query: 998  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKS 819
            NIRLVISIAKNYQG G+++QDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKS
Sbjct: 339  NIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 398

Query: 818  LSDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPK 639
            LSDQSRTIRLPFHMV+ATYRV+EA KQL+SENG+ PNDEEVAEATGLSMKRL+ V+LTPK
Sbjct: 399  LSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLSMKRLTTVLLTPK 458

Query: 638  APRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKVLDTLNPREKQVVSWR 459
            APRSLDQKIG+NQ+LKPS+VI+DPEAET+E+LL+KQFM+QDL KVL+TLNPREKQVV WR
Sbjct: 459  APRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKVLNTLNPREKQVVRWR 518

Query: 458  FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMA 306
            FGLEDGRMKTLQEIGELMGVSRERIRQIES AFRKLKNKKRTK+L+QY+++
Sbjct: 519  FGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKNLRQYLLS 569