BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00000217
         (1499 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU25198.1| hypothetical protein MIMGU_mgv1a004656mg [Mimulus...   556   e-156
gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus...   553   e-155
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   543   e-152
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   530   e-148
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   531   e-148
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   526   e-147
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   526   e-147
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   523   e-146
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   523   e-145
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     522   e-145
gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlise...   514   e-143
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   508   e-141
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   505   e-140
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   503   e-140
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]     500   e-139
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   498   e-138
ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, part...   494   e-137
ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,...   494   e-137
ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phas...   494   e-137
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   494   e-137

>gb|EYU25198.1| hypothetical protein MIMGU_mgv1a004656mg [Mimulus guttatus]
          Length = 516

 Score =  556 bits (1434), Expect = e-156
 Identities = 281/371 (75%), Positives = 317/371 (85%), Gaps = 3/371 (0%)
 Frame = -3

Query: 1353 SLVRSQRKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLV 1174
            +LVRSQR+G+RL+L+KR+ +RM KE   +   + + + + D+DEK DRL+R+Y+ S+D  
Sbjct: 146  NLVRSQRRGKRLSLEKRVALRMKKESVPLLSQKKEVNNKSDDDEKIDRLLRDYSISSDFF 205

Query: 1173 SLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVV 994
            SLDWKK KIPPVLPSSEH WLFKLMQPMKEILKVKETL +DLGRE+ DDELA A NT+V 
Sbjct: 206  SLDWKKTKIPPVLPSSEHVWLFKLMQPMKEILKVKETLTNDLGREVRDDELAEATNTDVF 265

Query: 993  QLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFE 814
            QLRKQLEVGR ARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGL+TAIDRFE
Sbjct: 266  QLRKQLEVGRTARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLITAIDRFE 325

Query: 813  PRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVE 634
            P+RKFRLSTYGLFWIRHAIVRSMT+SSFTKVSFGLESVRVEIQ+AK EL F+L R+PT E
Sbjct: 326  PKRKFRLSTYGLFWIRHAIVRSMTISSFTKVSFGLESVRVEIQKAKTELLFELHRLPTDE 385

Query: 633  EIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDV---EGDSRRQPAXXXX 463
            EIIERVGIS ER++EV R SKPI SLH RH++T EEFIN + D+   EGD R+QPA    
Sbjct: 386  EIIERVGISAERFNEVTRVSKPISSLHARHKITHEEFINGVADIDGFEGDQRQQPALLRL 445

Query: 462  XXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPA 283
                    LKPKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKA MKLKHPA
Sbjct: 446  ALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKAFMKLKHPA 505

Query: 282  RVDYLRHYIYK 250
            RVDYLRH+I K
Sbjct: 506  RVDYLRHHISK 516


>gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus guttatus]
          Length = 515

 Score =  553 bits (1425), Expect(2) = e-155
 Identities = 283/374 (75%), Positives = 322/374 (86%), Gaps = 4/374 (1%)
 Frame = -3

Query: 1359 AVSLVRSQR-KGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSST 1183
            A ++VRS+R K RRLNL+KRI +R  KE E  A+ Q +K  ++DEDEK DRLVR+Y++S+
Sbjct: 142  ADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQRRKTGKNDEDEKIDRLVRDYSASS 201

Query: 1182 DLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNT 1003
            DLVSLDWKKMKIPPVLPS+EH WLFKLMQP+K IL VKET++++LGRE TD++LA A+N 
Sbjct: 202  DLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDVKETIENNLGREPTDEKLATAINM 261

Query: 1002 EVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAID 823
            + VQLRKQLE+GRAARNKLIKHNLRLVLFVMNKYFQDF+NG RFQDLCQAG KGL+TAID
Sbjct: 262  DTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYFQDFSNGSRFQDLCQAGAKGLITAID 321

Query: 822  RFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIP 643
            RFEP+RK RLSTYGLFWIRH+I+RSMTLSSFTKVSFGLESVRVEI++AK EL F+L+R+P
Sbjct: 322  RFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVSFGLESVRVEIRKAKLELMFELKRLP 381

Query: 642  TVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAX 472
            T EEI+ RVGIS ERYHEVMR SKPI SLH RH VTQEEFIN ITD   VEGD R+QPA 
Sbjct: 382  TDEEIVGRVGISQERYHEVMRVSKPIISLHARHSVTQEEFINGITDVDGVEGDRRKQPAL 441

Query: 471  XXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLK 292
                       LKPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLK
Sbjct: 442  LRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLK 501

Query: 291  HPARVDYLRHYIYK 250
            H ARVDYLR Y++K
Sbjct: 502  HRARVDYLRRYVFK 515



 Score = 25.8 bits (55), Expect(2) = e-155
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -1

Query: 1496 RVKRRQPQRKKSGETEEAEKEKAVSLVRS 1410
            RVKRRQP RK++   +EAEK  A ++VRS
Sbjct: 122  RVKRRQP-RKRTEYADEAEK-IADNVVRS 148


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  543 bits (1398), Expect(2) = e-152
 Identities = 277/373 (74%), Positives = 314/373 (84%), Gaps = 4/373 (1%)
 Frame = -3

Query: 1359 AVSLVRSQRK-GRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSST 1183
            A ++V+++RK  +RLNLD+RI +   KE E VA ++ +K + D EDEK D+LVREY+ +T
Sbjct: 144  ADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERRKLKEDTEDEKIDKLVREYSGAT 203

Query: 1182 DLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNT 1003
            DL SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+VKE L++DLGRE TD E+A A N 
Sbjct: 204  DLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATNM 263

Query: 1002 EVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAID 823
            +  +LRK+LEVGRAARNKLIKHNLRLVLFVMNKYFQDFANG RFQDLCQAGVKGL+TAID
Sbjct: 264  DASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGSRFQDLCQAGVKGLITAID 323

Query: 822  RFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIP 643
            RFEP RKFRLSTYGLFWIRHAI+RSMT SSFTKV FGLES+RVEIQ+AK EL F+LQRIP
Sbjct: 324  RFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAKLELLFELQRIP 383

Query: 642  TVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAX 472
            T EEII RVG+SPERYHEVM+ SKP+ SLH R++ TQEE IN ITD   V+GD R+QPA 
Sbjct: 384  TDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTTQEELINGITDVDGVDGDKRKQPAL 443

Query: 471  XXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLK 292
                       LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLK
Sbjct: 444  LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLK 503

Query: 291  HPARVDYLRHYIY 253
            HP RVDY+R YI+
Sbjct: 504  HPTRVDYVRRYIF 516



 Score = 25.0 bits (53), Expect(2) = e-152
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -1

Query: 1499 HRVKRRQPQRKKSGE-TEEAEKEKAVSLVRS 1410
            H VKRR   RK+  E  EEA+KE A ++V++
Sbjct: 120  HLVKRRPRTRKRIVEGDEEAKKEVADNVVKN 150


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  530 bits (1366), Expect(2) = e-148
 Identities = 269/365 (73%), Positives = 304/365 (83%), Gaps = 3/365 (0%)
 Frame = -3

Query: 1338 QRKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLVSLDWK 1159
            ++K +RLNLD+RI +   KE + +A ++ +K   D EDEK D+LVREY+ +TDL SLDWK
Sbjct: 152  RKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDEKIDKLVREYSGATDLASLDWK 211

Query: 1158 KMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVVQLRKQ 979
            KMKIPPVLPSSEH WLFKLMQPMK IL+VKE L++DLGRE TD E+A A N +  +LRK+
Sbjct: 212  KMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATNMDASELRKK 271

Query: 978  LEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFEPRRKF 799
            LE GRAARNKLIKHNLRLVLFVMNKYFQDFAN  RFQDLCQAGVKGL+TAIDRFEP RKF
Sbjct: 272  LEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKF 331

Query: 798  RLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVEEIIER 619
            RLSTYGLFWIRHAI+R MT SSFTKV FGLES+RVEIQ+AK EL F+LQRIPT +EII+R
Sbjct: 332  RLSTYGLFWIRHAIIRYMTTSSFTKVPFGLESIRVEIQKAKLELLFELQRIPTDDEIIKR 391

Query: 618  VGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAXXXXXXXXX 448
            VG SPERYHEVM+ SKPI SLH R++ TQEE IN ITD   V+GD R+QPA         
Sbjct: 392  VGFSPERYHEVMKVSKPIFSLHARNKTTQEELINGITDVDGVDGDKRKQPALLRLALDDV 451

Query: 447  XXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARVDYL 268
               LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHP RVDY+
Sbjct: 452  LDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYV 511

Query: 267  RHYIY 253
            R YI+
Sbjct: 512  RRYIF 516



 Score = 24.3 bits (51), Expect(2) = e-148
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 1499 HRVKRRQPQRKKSGETEEAEKEKAVSLV 1416
            H VKRR   RK+  E++E  K++ V  V
Sbjct: 120  HLVKRRPRTRKRIVESDEEAKKEVVDNV 147


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  531 bits (1367), Expect = e-148
 Identities = 270/370 (72%), Positives = 315/370 (85%), Gaps = 4/370 (1%)
 Frame = -3

Query: 1353 SLVRSQ-RKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDL 1177
            ++VR++ +K +RL+L+KR+ ++  K+ + ++    K+  R +E+EK + LVREY++STDL
Sbjct: 149  TVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKIEELVREYSTSTDL 208

Query: 1176 VSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEV 997
            VSLDWKKMKIPPVL SSEHAWLFKLMQPMK +L+VKE L+ DLGRE T+ ELA A N  V
Sbjct: 209  VSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEATNMSV 268

Query: 996  VQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRF 817
            VQ++K LEVGRAAR+KLIKHNLRLVLFVMNKYFQDFANGP+FQDLCQAGVKGL+TAIDRF
Sbjct: 269  VQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRF 328

Query: 816  EPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTV 637
            EP+R FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLESVR EIQ+AK  + F L+R+PT 
Sbjct: 329  EPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKRMPTE 388

Query: 636  EEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAXXX 466
            +EIIE+VGISPERYHEVMRASKP+ SLH RH  TQEEFIN ITD   VEGD+R++PA   
Sbjct: 389  DEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGDNRQKPALLR 448

Query: 465  XXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHP 286
                     LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHP
Sbjct: 449  LALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP 508

Query: 285  ARVDYLRHYI 256
            ARVDYLR Y+
Sbjct: 509  ARVDYLRRYV 518


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  526 bits (1356), Expect = e-147
 Identities = 272/369 (73%), Positives = 308/369 (83%), Gaps = 4/369 (1%)
 Frame = -3

Query: 1350 LVRSQ-RKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLV 1174
            +VR+Q  + +RL+LD RI ++  +E + V   + KK   ++E EK DRLVR+Y++STDLV
Sbjct: 148  VVRNQTNRIKRLSLDNRIALKKNREEKPVVSVRRKKSS-ENESEKIDRLVRDYSASTDLV 206

Query: 1173 SLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVV 994
            SLDW+KMKIPPVLPS EH WLFKLMQPMK +L+ KE L+ DLGR+ T+DELA A N    
Sbjct: 207  SLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQAKENLQKDLGRDPTEDELAEATNMSAA 266

Query: 993  QLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFE 814
            Q+RK LEVG+AARNKLIKHNLRLVLF +NKYFQDFANGPRFQDLCQAGVKGL+TAIDRFE
Sbjct: 267  QVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQDFANGPRFQDLCQAGVKGLITAIDRFE 326

Query: 813  PRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVE 634
            PRR+FRLSTY LFWIRHAI+RSMTLSSFT+VSFGLESVRVEIQRAK EL F+L R PT E
Sbjct: 327  PRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLELLFELHREPTEE 386

Query: 633  EIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVE---GDSRRQPAXXXX 463
            EII++VGISPERY EVMRASKP+ SLH RH VTQEEFIN ITD++   GD RRQPA    
Sbjct: 387  EIIKKVGISPERYQEVMRASKPVASLHSRHSVTQEEFINGITDIDGVGGDHRRQPALLRL 446

Query: 462  XXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPA 283
                    LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHPA
Sbjct: 447  ALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPA 506

Query: 282  RVDYLRHYI 256
            RVDYLR Y+
Sbjct: 507  RVDYLRRYV 515


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  526 bits (1356), Expect = e-147
 Identities = 273/368 (74%), Positives = 312/368 (84%), Gaps = 2/368 (0%)
 Frame = -3

Query: 1353 SLVRSQ-RKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDL 1177
            ++VR++ +K +RL+LDKRI ++  +E E V   + KK  +DD +EK + LVR Y++ST+L
Sbjct: 134  TIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKKDSKDD-NEKIEELVRTYSASTNL 192

Query: 1176 VSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEV 997
            VSLDW+KMKIPPVLPS+EHAWLFKLMQPMK +L VK  L+ +LGR+ TD ELA A N  V
Sbjct: 193  VSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRDPTDGELAEATNMNV 252

Query: 996  VQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRF 817
             ++RKQLEVGRAARNKLIKHNLRLV+FVMNKYFQDFANGPRFQDLCQAGVKGL+TAIDRF
Sbjct: 253  EKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLCQAGVKGLITAIDRF 312

Query: 816  EPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTV 637
            EP+R+F+LSTY LFWIRHAI+RSMTLSSFTKVSFGLESVR EIQ+AK EL  +LQR PT 
Sbjct: 313  EPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLESVRTEIQKAKLELLIELQRRPTE 372

Query: 636  EEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVE-GDSRRQPAXXXXX 460
            EEIIERVGIS ERYHEV+RA+KP  SLH RH VTQEEFIN ITD++ GD+RRQPA     
Sbjct: 373  EEIIERVGISAERYHEVIRAAKPALSLHARHAVTQEEFINGITDIDGGDNRRQPALLRLA 432

Query: 459  XXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPAR 280
                   LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPAR
Sbjct: 433  LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPAR 492

Query: 279  VDYLRHYI 256
            VDYLR Y+
Sbjct: 493  VDYLRRYV 500


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  523 bits (1348), Expect = e-146
 Identities = 271/364 (74%), Positives = 308/364 (84%), Gaps = 3/364 (0%)
 Frame = -3

Query: 1335 RKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLVSLDWKK 1156
            +K +RL+L+KRI +   K+ + VA  Q K+  ++ EDE  D LVREY++STDLVSLDWKK
Sbjct: 156  KKPKRLSLEKRIALSKMKQEKAVASIQKKRDSKN-EDENIDVLVREYSASTDLVSLDWKK 214

Query: 1155 MKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVVQLRKQL 976
            MKIPPVLP SEHAWLFKLMQPMK +L+VK+ L+ DLGRE TD ELA A++   VQ+R+ +
Sbjct: 215  MKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHM 274

Query: 975  EVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFEPRRKFR 796
            EVG+AARNKLIKHNLRLVLFV+NKYFQ+FANGP+FQDLCQAGVKGL+TAIDRFEP+R FR
Sbjct: 275  EVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFR 334

Query: 795  LSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVEEIIERV 616
            LSTYGLFWIRHAI+RSMTLSSFT+VSFGLESVRVEIQRAK EL FKLQR+PT EEIIE+V
Sbjct: 335  LSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKV 394

Query: 615  GISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVE---GDSRRQPAXXXXXXXXXX 445
            GISPERYHEVMRASK + SLH RH  TQEE+IN ITDVE   GD  RQ A          
Sbjct: 395  GISPERYHEVMRASKSVLSLHARHATTQEEYINGITDVEGVGGDRGRQLALLRLALDDVL 454

Query: 444  XXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARVDYLR 265
              LKPKESLV+RQRYGLDGKGDRTLGEIAGNL+ISREMVRK+EVKALMKLKHPARVDYLR
Sbjct: 455  DSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLR 514

Query: 264  HYIY 253
             YI+
Sbjct: 515  QYIF 518


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  523 bits (1346), Expect = e-145
 Identities = 268/369 (72%), Positives = 310/369 (84%), Gaps = 4/369 (1%)
 Frame = -3

Query: 1350 LVRS-QRKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLV 1174
            +VRS  +K +RL+LDKR+ ++  K+ +  A    K+  +  E+E  + LVREY++STDLV
Sbjct: 151  VVRSVTKKAKRLSLDKRVALKWNKDEKVAASVVRKRKDKRSENEMMEELVREYSASTDLV 210

Query: 1173 SLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVV 994
            SLDWKKM+IPPVL SSEH WLFKLMQPMK +L+VKE L+ DLGRE    ELA A N  VV
Sbjct: 211  SLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGREPNKGELAEATNMTVV 270

Query: 993  QLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFE 814
            Q+++ LEVGRAARNKLIKHNLRLVLFV+NKYFQDFANGP+FQDLCQAGVKGL+TAIDRFE
Sbjct: 271  QVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITAIDRFE 330

Query: 813  PRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVE 634
            P+R+FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLESVR EIQ+AK E+  +L+R+PT +
Sbjct: 331  PQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLVQLKRMPTED 390

Query: 633  EIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAXXXX 463
            EIIE+VGISPERYHEVMRASKP+ SL+ RH VTQEEFIN ITD   V+GD+RR+PA    
Sbjct: 391  EIIEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVDGVDGDNRRKPALLRL 450

Query: 462  XXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPA 283
                    LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHPA
Sbjct: 451  AIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPA 510

Query: 282  RVDYLRHYI 256
            RVDYLR YI
Sbjct: 511  RVDYLRRYI 519


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  522 bits (1344), Expect = e-145
 Identities = 263/364 (72%), Positives = 307/364 (84%), Gaps = 3/364 (0%)
 Frame = -3

Query: 1338 QRKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLVSLDWK 1159
            ++K +RL+L KR+ ++  KE     +   K+    +E+EK ++LVREY++STDLVSLDWK
Sbjct: 153  KKKAKRLSLHKRVELKRDKEENVAVVLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWK 212

Query: 1158 KMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVVQLRKQ 979
            KMKIPPVLPSSEH WLFKLMQP+K++ +V E L+  LGRE T++ELA A N  VVQ+++ 
Sbjct: 213  KMKIPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLGREPTENELAEATNISVVQVKRH 272

Query: 978  LEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFEPRRKF 799
            LE GRAARNKLIKHNLRLVLFVMNKYFQDF NGP+FQDLCQAGV+GL+TAIDRFEP+R+F
Sbjct: 273  LEAGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGVRGLITAIDRFEPKRRF 332

Query: 798  RLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVEEIIER 619
            RLSTYGLFWIRHAI+RSMT+SSFT+VSFGLESVR EIQ+AK EL F+L+R+PT EEIIE+
Sbjct: 333  RLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKIELTFELKRLPTEEEIIEK 392

Query: 618  VGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAXXXXXXXXX 448
            VGISPERYHEVMRASKP+ SL+ RH  TQEEFINAITD   V+GD RR+PA         
Sbjct: 393  VGISPERYHEVMRASKPVISLNSRHVTTQEEFINAITDVDGVDGDDRRKPALLRLALDDV 452

Query: 447  XXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARVDYL 268
               LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHPARVDYL
Sbjct: 453  LDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYL 512

Query: 267  RHYI 256
            R Y+
Sbjct: 513  RRYM 516


>gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlisea aurea]
          Length = 488

 Score =  514 bits (1323), Expect(2) = e-143
 Identities = 267/374 (71%), Positives = 304/374 (81%), Gaps = 5/374 (1%)
 Frame = -3

Query: 1356 VSLVRSQRKG--RRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSST 1183
            V++VRS R    +RLNL++RI +RM  E +  A    K   + D+D+K  RL+REY++S 
Sbjct: 115  VNIVRSTRNKTKKRLNLNERISLRMKVESDSSATIHRKNVPKSDDDQKISRLLREYSASA 174

Query: 1182 DLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNT 1003
            DL SLDWKKMKIPPVLPSSEH WLFKLMQPMKE  KVKETLK  LGRE TD ELA A+N 
Sbjct: 175  DLSSLDWKKMKIPPVLPSSEHTWLFKLMQPMKETNKVKETLKVALGREPTDYELAEAMNM 234

Query: 1002 EVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAID 823
            + V LRK++EVGRA+RNKLI+HNLRLVLFVMNKYFQDF+NGP+FQDLCQAGVKGL+TAID
Sbjct: 235  DPVPLRKRIEVGRASRNKLIRHNLRLVLFVMNKYFQDFSNGPKFQDLCQAGVKGLITAID 294

Query: 822  RFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIP 643
            RFEP+RK RLSTYGLFWIRHA+VRSMTLSSFTKVSFGLES+R EIQ+ K EL  KLQR P
Sbjct: 295  RFEPKRKSRLSTYGLFWIRHAVVRSMTLSSFTKVSFGLESIRAEIQKTKMELMVKLQRRP 354

Query: 642  TVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAIT---DVEGDSRRQPAX 472
            T EEI+ RVGIS ERY EVMR +KP+ SL+ RHE+T EEFI  I+   DVEGD R++ A 
Sbjct: 355  TDEEIMNRVGISEERYREVMRVTKPVSSLNARHELTNEEFIAGISDADDVEGDRRKELAL 414

Query: 471  XXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLK 292
                       LKPKE LVIRQRYGLDGKGDRTLGE+AGNLNISREMVRK+EVKALMKLK
Sbjct: 415  LRLAIDDVLDSLKPKEGLVIRQRYGLDGKGDRTLGEVAGNLNISREMVRKHEVKALMKLK 474

Query: 291  HPARVDYLRHYIYK 250
            HPARVDYLR YI+K
Sbjct: 475  HPARVDYLRRYIFK 488



 Score = 23.1 bits (48), Expect(2) = e-143
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 1490 KRRQPQRKKSGETEEAEKEKAVSLVRS 1410
            KR++PQRK+  E   A     V++VRS
Sbjct: 98   KRKRPQRKRKSEHANA----GVNIVRS 120


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  508 bits (1308), Expect = e-141
 Identities = 263/367 (71%), Positives = 307/367 (83%), Gaps = 2/367 (0%)
 Frame = -3

Query: 1350 LVRSQ-RKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLV 1174
            +VR++ +K +RL+L+KRI +R+  E + V+ A  +K R++ E+EK D LVREY++STDLV
Sbjct: 146  IVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGKRKDRKN-ENEKIDDLVREYSASTDLV 204

Query: 1173 SLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVV 994
            SLDWKKMKIPPVL SSEH WLFKLMQPMK +L+VKE L+ +LG E TD ELA A N +V+
Sbjct: 205  SLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTDVELAKATNMDVL 264

Query: 993  QLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFE 814
            Q+RKQ+ VGRAARNKLIKHNLRLVLFV+ KYFQDFANG +FQD CQAGVKGL+TAIDRFE
Sbjct: 265  QVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAGVKGLITAIDRFE 324

Query: 813  PRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVE 634
            P+R+FRLSTYGLFWIRHAI+RSMTLSSFT+VSFGLES+R EIQ+AK EL F+L+R P  +
Sbjct: 325  PKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELWFQLKRQPMED 384

Query: 633  EIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVE-GDSRRQPAXXXXXX 457
            EIIE+V ISPERYHEV RASKP+ SLH RH+ TQEEFI  I DV+ GD RRQ A      
Sbjct: 385  EIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEFIGGIADVDGGDDRRQSALLRLAL 444

Query: 456  XXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARV 277
                  LKPKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHP RV
Sbjct: 445  DDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRV 504

Query: 276  DYLRHYI 256
            DYLR Y+
Sbjct: 505  DYLRRYV 511


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  505 bits (1301), Expect = e-140
 Identities = 265/373 (71%), Positives = 309/373 (82%), Gaps = 8/373 (2%)
 Frame = -3

Query: 1350 LVRSQRKG-RRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDE----KTDRLVREYTSS 1186
            +VR+Q K  +RL+LDKRI ++  KE + VAL + +K  +++ DE    + DRLVR+Y++S
Sbjct: 141  IVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKDTKNEADEIDDDEIDRLVRDYSAS 200

Query: 1185 TDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVN 1006
            TDLVSLDWKKMKIPPVLPSSEH  LFKL+QPMK +++V+E L+  LGRE T+ ELA A N
Sbjct: 201  TDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGREPTEGELANATN 260

Query: 1005 TEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAI 826
              V+Q+R+QLEVGRAARNKLIKHNLRLVLFV+NKYF+DFA+GP+FQDLCQAGVKGL+TAI
Sbjct: 261  MNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAI 320

Query: 825  DRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRI 646
            DRFEP+RKFRLSTY LFWIRHAI+RSMTLSSFT+VSFGL+SVRVEIQRAK EL  +L R+
Sbjct: 321  DRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRL 380

Query: 645  PTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVE---GDSRRQPA 475
            PT  EI  +VGIS ERY EVMRA+KP+ SLH RH  T EE IN ITDVE   GD+RRQPA
Sbjct: 381  PTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEGTGGDNRRQPA 440

Query: 474  XXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKL 295
                        LKPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRK+EVKALMKL
Sbjct: 441  LLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKL 500

Query: 294  KHPARVDYLRHYI 256
            KHPARVDYLR Y+
Sbjct: 501  KHPARVDYLRRYL 513


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  503 bits (1296), Expect = e-140
 Identities = 264/369 (71%), Positives = 305/369 (82%), Gaps = 4/369 (1%)
 Frame = -3

Query: 1350 LVRSQ-RKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLV 1174
            +VR+Q ++ +RL+LDKRI +R  ++ + V   + +K    DE EK ++LVREY+ STDLV
Sbjct: 146  VVRNQVKRPKRLSLDKRIELRKNEDEKVVT--KTRKTDSKDEHEKIEKLVREYSYSTDLV 203

Query: 1173 SLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVV 994
            SLDWKKMKIPPVL S+EH WLFKLMQPMK  ++VKE L+ DLGRE TD ELA A N    
Sbjct: 204  SLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGREPTDVELAEATNMSAA 263

Query: 993  QLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFE 814
            Q++K LEVGRAARNKLIKHNLRLVLFV+ KYFQDFANGPRFQDLCQAGVKGL+TAIDRFE
Sbjct: 264  QVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQAGVKGLITAIDRFE 323

Query: 813  PRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVE 634
            P+R+FRLSTYGLFWIRHAI+RSMT+SSFT+V FGLESVR EIQRAK EL F+L+R+PT E
Sbjct: 324  PKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRGEIQRAKLELLFELKRVPTDE 383

Query: 633  EIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVEG---DSRRQPAXXXX 463
            EII+ V ISPERY EVM+ASKPI SLH RH VTQEEFIN ITDV+G   +++RQPA    
Sbjct: 384  EIIQGVNISPERYREVMKASKPILSLHSRHGVTQEEFINGITDVDGVENENQRQPALLRL 443

Query: 462  XXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPA 283
                    LKPKESLVIRQR+GLDGKGDRTLGEIAGNLNISREMVRK+EVK LMKLKHP 
Sbjct: 444  ALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKGLMKLKHPT 503

Query: 282  RVDYLRHYI 256
            RVDYLR ++
Sbjct: 504  RVDYLRQHM 512


>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
          Length = 511

 Score =  500 bits (1287), Expect = e-139
 Identities = 251/363 (69%), Positives = 301/363 (82%), Gaps = 4/363 (1%)
 Frame = -3

Query: 1332 KGRRLNLDKRICM-RMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLVSLDWKK 1156
            K +RL+LDKRI + R  +E   V  AQ K  ++  E+EK +RLVR+Y++S D+VSLDWKK
Sbjct: 148  KEKRLSLDKRIALKRNIQEKPLVPSAQKKVTKKQQEEEKIERLVRDYSASHDIVSLDWKK 207

Query: 1155 MKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVVQLRKQL 976
            MKIPPVLPS+EHAWLFKLMQPMK +L+VK+ L+  LGRE  + E+A  +N    ++++++
Sbjct: 208  MKIPPVLPSTEHAWLFKLMQPMKALLQVKDELQKSLGREPRETEIAGEINMSAAEVKRKI 267

Query: 975  EVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFEPRRKFR 796
            E+GRAARNKLIKHNLRLVLFVMNKYFQDF NGP+FQDLCQAG++GL+TAIDRFEP+RKFR
Sbjct: 268  EIGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGMRGLITAIDRFEPKRKFR 327

Query: 795  LSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVEEIIERV 616
            LSTYGLFWIRHAI+RSMT S+FT+V FGLESVRVEI + K EL F+L R+PT +E++ER+
Sbjct: 328  LSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKTKMELLFELGRLPTEDEVVERL 387

Query: 615  GISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVEG---DSRRQPAXXXXXXXXXX 445
             ISPERY EV+RA+KP+ SL+ +H VTQEEFIN ITDV+G   D+RRQPA          
Sbjct: 388  KISPERYREVLRAAKPVFSLNSKHSVTQEEFINGITDVDGVGADNRRQPAILRLALDDVL 447

Query: 444  XXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARVDYLR 265
              LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKH ARVDYLR
Sbjct: 448  DSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHQARVDYLR 507

Query: 264  HYI 256
             YI
Sbjct: 508  QYI 510


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  498 bits (1281), Expect = e-138
 Identities = 263/375 (70%), Positives = 307/375 (81%), Gaps = 10/375 (2%)
 Frame = -3

Query: 1350 LVRSQRKG-RRLNLDKRICMR------MTKECEFVALAQNKKHRRDDEDEKTDRLVREYT 1192
            +VR+Q K  +RL+LDKRI ++        KE + V   + +K  ++++DE  DRLVR+Y+
Sbjct: 141  IVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPSLRKQKETKNEDDE-IDRLVRDYS 199

Query: 1191 SSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVA 1012
            +STDLVSLDWKKMKIPPVLPSSEH  LFKL+QPMK +++V+E L+  LGRE T+ ELA A
Sbjct: 200  ASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGREPTEGELANA 259

Query: 1011 VNTEVVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMT 832
             N  V+Q+R+QLEVGRAARNKLIKHNLRLVLFV+NKYF+DFA+GP+FQDLCQAGVKGL+T
Sbjct: 260  TNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLIT 319

Query: 831  AIDRFEPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQ 652
            AIDRFEP+RKFRLSTY LFWIRHAI+RSMTLSSFT+VSFGL+SVRVEIQRAK EL  +L 
Sbjct: 320  AIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELH 379

Query: 651  RIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVE---GDSRRQ 481
            R+PT  EI  +VGIS ERY EVMRA+KP+ SLH RH  T EE IN ITDVE   GD+RRQ
Sbjct: 380  RLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEGTGGDNRRQ 439

Query: 480  PAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALM 301
            PA            LKPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRK+EVKALM
Sbjct: 440  PALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALM 499

Query: 300  KLKHPARVDYLRHYI 256
            KLKHPARVDYLR Y+
Sbjct: 500  KLKHPARVDYLRRYL 514


>ref|XP_006287402.1| hypothetical protein CARUB_v10000608mg, partial [Capsella rubella]
            gi|482556108|gb|EOA20300.1| hypothetical protein
            CARUB_v10000608mg, partial [Capsella rubella]
          Length = 557

 Score =  494 bits (1272), Expect = e-137
 Identities = 250/364 (68%), Positives = 301/364 (82%), Gaps = 4/364 (1%)
 Frame = -3

Query: 1335 RKGRRLNLDKRICM-RMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDLVSLDWK 1159
            +K +RL+LDKRI + R  +E  FVA A+ K  ++  E+EK D LVR+Y+ S D++SLDWK
Sbjct: 193  KKDKRLSLDKRIALKRNCQEKPFVASAEKKVTKKQQEEEKIDMLVRDYSVSNDILSLDWK 252

Query: 1158 KMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEVVQLRKQ 979
            KMKIPPVL S+EHAWLFKLMQPMK +L+VK+ L+  LGRE  + E+A  +     +++K+
Sbjct: 253  KMKIPPVLSSTEHAWLFKLMQPMKALLEVKDELQKSLGREPREAEIAGEIKMTTGEVKKK 312

Query: 978  LEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRFEPRRKF 799
            +E+GRAARNKLIKHNLRLVLFVMNKYFQ+F NGP+FQDLCQAG+KGL+TAIDRFEP+RKF
Sbjct: 313  IEIGRAARNKLIKHNLRLVLFVMNKYFQEFTNGPKFQDLCQAGMKGLITAIDRFEPKRKF 372

Query: 798  RLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVEEIIER 619
            RLSTYGLFWIRHAI+RSMT S+FT+V FGLESVRVEI +AK EL F+L R+PT +E+I+R
Sbjct: 373  RLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKAKMELLFELGRLPTEDEVIKR 432

Query: 618  VGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVEG---DSRRQPAXXXXXXXXX 448
            + I+PERY EV+RA+KP+ SL+ +H VTQEEFIN ITDV+G   D+RRQPA         
Sbjct: 433  LKITPERYREVLRAAKPVFSLNSKHAVTQEEFINGITDVDGVGADNRRQPALLRLALDDV 492

Query: 447  XXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPARVDYL 268
               LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKH ARVDYL
Sbjct: 493  LDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHQARVDYL 552

Query: 267  RHYI 256
            R YI
Sbjct: 553  RQYI 556


>ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Glycine max]
          Length = 488

 Score =  494 bits (1271), Expect = e-137
 Identities = 254/370 (68%), Positives = 307/370 (82%), Gaps = 4/370 (1%)
 Frame = -3

Query: 1353 SLVRSQ-RKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDL 1177
            ++VR+Q +K +RL+LDKRI ++   + E +   Q K++ ++   +  D L+R+Y++STDL
Sbjct: 120  NVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKN-RVQNIDVLIRDYSASTDL 178

Query: 1176 VSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEV 997
            VS+DWKKMKIPPVLPSSEHAWLFKLMQPMK +L+ KE LK ++ +E+T  ELA A N  +
Sbjct: 179  VSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDLK-EVDKEITGGELADATNMSI 237

Query: 996  VQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRF 817
            +Q+RK +EVGRAARNKLIKHNLRLVLFV+NKYFQDFA+GPRFQDLCQAGVKGL+TAIDRF
Sbjct: 238  IQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLITAIDRF 297

Query: 816  EPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTV 637
            EP+R+ +LSTY LFWIRH+IVRS+TLSSFT+V FGLE VRV+IQR K +L F+LQR PT 
Sbjct: 298  EPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQRSPTE 357

Query: 636  EEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVE---GDSRRQPAXXX 466
            EE++ER+GIS ERYHEVM+ASKPI SLH RH  TQEE+IN ITDV+   GD+RRQ A   
Sbjct: 358  EELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVDGVNGDNRRQLAVLR 417

Query: 465  XXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHP 286
                     LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE+VRK+EVKALMKLKHP
Sbjct: 418  LALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIVRKHEVKALMKLKHP 477

Query: 285  ARVDYLRHYI 256
            AR+DYLR Y+
Sbjct: 478  ARLDYLRRYV 487


>ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
            gi|561034810|gb|ESW33340.1| hypothetical protein
            PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  494 bits (1271), Expect = e-137
 Identities = 254/370 (68%), Positives = 310/370 (83%), Gaps = 4/370 (1%)
 Frame = -3

Query: 1353 SLVRSQ-RKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDL 1177
            S+VR+Q +K +RL+LDKRI ++   + E +  AQ K  R  +  E  D L+REY++STDL
Sbjct: 144  SVVRNQNKKAKRLSLDKRIALKRNPKQEVIVQAQKK--RDVNRIENIDALIREYSASTDL 201

Query: 1176 VSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEV 997
            VS+DWKK+KIPPVLPSSEHAWLFKLM+PMKE+L+V+E L+ ++G+E++D ELA A +  V
Sbjct: 202  VSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELLQVREDLQ-EVGKEISDGELADANSISV 260

Query: 996  VQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRF 817
            +Q+RK LEVG+AARNKLIKHNLRLVLFV+NKYFQDFA+GPRFQDLCQAGVKGL+TAIDRF
Sbjct: 261  IQVRKALEVGQAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLITAIDRF 320

Query: 816  EPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTV 637
            E +R+ +LSTY LFWIRH+IVRS+TLSS T+V FGL+ VR +I RAK EL+F+LQR PT 
Sbjct: 321  ESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVPFGLDRVRADIHRAKLELRFELQRSPTE 380

Query: 636  EEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITD---VEGDSRRQPAXXX 466
            +E++ER+GISPERY++V++ASKPI SLH RH VTQEEFIN ITD   V+GD+RRQ A   
Sbjct: 381  KEVVERIGISPERYYDVLKASKPIISLHSRHIVTQEEFINGITDLDGVDGDNRRQLAVLR 440

Query: 465  XXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHP 286
                     LKPKESLV+RQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKHP
Sbjct: 441  LALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP 500

Query: 285  ARVDYLRHYI 256
            AR+DYLR Y+
Sbjct: 501  ARLDYLRRYV 510


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  494 bits (1271), Expect = e-137
 Identities = 254/370 (68%), Positives = 307/370 (82%), Gaps = 4/370 (1%)
 Frame = -3

Query: 1353 SLVRSQ-RKGRRLNLDKRICMRMTKECEFVALAQNKKHRRDDEDEKTDRLVREYTSSTDL 1177
            ++VR+Q +K +RL+LDKRI ++   + E +   Q K++ ++   +  D L+R+Y++STDL
Sbjct: 144  NVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKN-RVQNIDVLIRDYSASTDL 202

Query: 1176 VSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNTEV 997
            VS+DWKKMKIPPVLPSSEHAWLFKLMQPMK +L+ KE LK ++ +E+T  ELA A N  +
Sbjct: 203  VSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDLK-EVDKEITGGELADATNMSI 261

Query: 996  VQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLMTAIDRF 817
            +Q+RK +EVGRAARNKLIKHNLRLVLFV+NKYFQDFA+GPRFQDLCQAGVKGL+TAIDRF
Sbjct: 262  IQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLITAIDRF 321

Query: 816  EPRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTV 637
            EP+R+ +LSTY LFWIRH+IVRS+TLSSFT+V FGLE VRV+IQR K +L F+LQR PT 
Sbjct: 322  EPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQRSPTE 381

Query: 636  EEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAITDVE---GDSRRQPAXXX 466
            EE++ER+GIS ERYHEVM+ASKPI SLH RH  TQEE+IN ITDV+   GD+RRQ A   
Sbjct: 382  EELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVDGVNGDNRRQLAVLR 441

Query: 465  XXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHP 286
                     LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE+VRK+EVKALMKLKHP
Sbjct: 442  LALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIVRKHEVKALMKLKHP 501

Query: 285  ARVDYLRHYI 256
            AR+DYLR Y+
Sbjct: 502  ARLDYLRRYV 511