BLASTX nr result
ID: Mentha29_contig00000146
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha29_contig00000146
(536 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK4565... 66 5e-09
gb|AFK33868.1| unknown [Lotus japonicus] 66 5e-09
sp|Q9XGX4.1|RBS3_AMAHP RecName: Full=Ribulose bisphosphate carbo... 66 6e-09
prf||0709274A carboxylase S,RBP 65 8e-09
gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 65 8e-09
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 65 8e-09
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 65 1e-08
gb|AAD27881.1|AF139469_1 ribulose-1,5-bisphosphate carboxylase s... 65 1e-08
sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carbox... 65 1e-08
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 65 1e-08
ref|XP_007151771.1| hypothetical protein PHAVU_004G073400g, part... 64 2e-08
ref|XP_007151650.1| hypothetical protein PHAVU_004G064800g [Phas... 64 2e-08
gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulg... 64 2e-08
emb|CAA42617.1| ribulose bisphosphate carboxylase [Phaseolus vul... 64 2e-08
sp|P00868.1|RBS1_PEA RecName: Full=Ribulose bisphosphate carboxy... 64 2e-08
emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vul... 64 2e-08
pdb|4HHH|S Chain S, Structure Of Pisum Sativum Rubisco gi|410563... 64 2e-08
emb|CAA59218.1| ribulose-bisphosphate carboxylase [synthetic con... 64 3e-08
ref|NP_001066607.1| Os12g0292400 [Oryza sativa Japonica Group] g... 64 3e-08
ref|NP_001066606.1| Os12g0291400 [Oryza sativa Japonica Group] g... 64 3e-08
>gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK45650.1| unknown
[Lotus japonicus]
Length = 177
Score = 66.2 bits (160), Expect = 5e-09
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKELEE +P AF+RIIGF+ KRQVQ +SFIAHRP GY
Sbjct: 133 DASQVLKELEEAKKAYPNAFIRIIGFDNKRQVQCISFIAHRPEGY 177
>gb|AFK33868.1| unknown [Lotus japonicus]
Length = 177
Score = 66.2 bits (160), Expect = 5e-09
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKELEE +P AF+RIIGF+ KRQVQ +SFIAHRP GY
Sbjct: 133 DASQVLKELEEAKKAYPNAFIRIIGFDNKRQVQCISFIAHRPEGY 177
>sp|Q9XGX4.1|RBS3_AMAHP RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor gi|5002365|gb|AAD37440.1|AF150667_1 ribulose
1,5 bisphosphate carboxylase small subunit precursor
[Amaranthus hypochondriacus]
Length = 180
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
DP QVL E+EE +P AF+RIIGF+ KRQVQ VSFIA +PPGY
Sbjct: 136 DPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAFKPPGY 180
>prf||0709274A carboxylase S,RBP
Length = 123
Score = 65.5 bits (158), Expect = 8e-09
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
DP QV+KEL+EV +PEAFVR+IGFN RQVQ +SFIAH P Y
Sbjct: 79 DPAQVVKELDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTPESY 123
>gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Rosa
roxburghii]
Length = 179
Score = 65.5 bits (158), Expect = 8e-09
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKELEE HP+ F+RIIGF+ RQVQ +SFIA++PPGY
Sbjct: 135 DSAQVLKELEEAKKAHPDGFIRIIGFDNVRQVQCISFIAYKPPGY 179
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 65.5 bits (158), Expect = 8e-09
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
DP+QV KEL+E +P AFVRIIGF+ KRQVQ +SFIA++PPG+
Sbjct: 137 DPLQVFKELDEAIKTYPNAFVRIIGFDNKRQVQCISFIAYKPPGF 181
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKELEE +P AFVRIIGF+ KRQVQ +SFIA +PPGY
Sbjct: 137 DSAQVLKELEECKKAYPTAFVRIIGFDNKRQVQCISFIAFKPPGY 181
>gb|AAD27881.1|AF139469_1 ribulose-1,5-bisphosphate carboxylase small subunit [Vigna radiata]
Length = 181
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKEL E TL+P+ FVRI+GF+ RQVQ +SFIA++PPGY
Sbjct: 137 DSSQVLKELREARTLYPDGFVRIVGFDSVRQVQCISFIAYKPPGY 181
>sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|1536889|emb|CAA69102.1|
ribulose-bisphosphate carboxylase [Betula pendula]
Length = 182
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPG 404
D QVLKELEE +P AF+RIIGF+ KRQVQI+SFIA++PPG
Sbjct: 138 DSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPG 181
>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 179
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKELEE +P AF+RIIGF+ KRQVQ +SFIA++PPG+
Sbjct: 135 DSAQVLKELEEAKKAYPTAFIRIIGFDNKRQVQCISFIAYKPPGF 179
>ref|XP_007151771.1| hypothetical protein PHAVU_004G073400g, partial [Phaseolus
vulgaris] gi|561025080|gb|ESW23765.1| hypothetical
protein PHAVU_004G073400g, partial [Phaseolus vulgaris]
Length = 121
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKEL E T HP+ F+RIIGF+ RQVQ +SFIA++PPGY
Sbjct: 77 DSSQVLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAYKPPGY 121
>ref|XP_007151650.1| hypothetical protein PHAVU_004G064800g [Phaseolus vulgaris]
gi|593702483|ref|XP_007151651.1| hypothetical protein
PHAVU_004G064900g [Phaseolus vulgaris]
gi|561024959|gb|ESW23644.1| hypothetical protein
PHAVU_004G064800g [Phaseolus vulgaris]
gi|561024960|gb|ESW23645.1| hypothetical protein
PHAVU_004G064900g [Phaseolus vulgaris]
Length = 180
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKEL E T HP+ F+RIIGF+ RQVQ +SFIA++PPGY
Sbjct: 136 DSSQVLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAYKPPGY 180
>gb|AGV54682.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
Length = 180
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKEL E T HP+ F+RIIGF+ RQVQ +SFIA++PPGY
Sbjct: 136 DSSQVLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAYKPPGY 180
>emb|CAA42617.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
Length = 135
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKEL E T HP+ F+RIIGF+ RQVQ +SFIA++PPGY
Sbjct: 91 DSSQVLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAYKPPGY 135
>sp|P00868.1|RBS1_PEA RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; AltName:
Full=PSSU1; Flags: Precursor gi|169148|gb|AAA33684.1|
ribulose-1,5-bisphosphate carboxylase small subunit
precursor [Pisum sativum]
Length = 136
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
DP QV+KE++EV +PEAFVR+IGFN RQVQ +SFIAH P Y
Sbjct: 92 DPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTPESY 136
>emb|CAA42618.1| ribulose bisphosphate carboxylase [Phaseolus vulgaris]
gi|21053|emb|CAA40339.1| small subunit of ribulose
1,5-bisphosphate carboxylase/oxygenase [Phaseolus
vulgaris]
Length = 180
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
D QVLKEL E T HP+ F+RIIGF+ RQVQ +SFIA++PPGY
Sbjct: 136 DSSQVLKELYEAQTAHPDGFIRIIGFDNVRQVQCISFIAYKPPGY 180
>pdb|4HHH|S Chain S, Structure Of Pisum Sativum Rubisco gi|410563179|pdb|4HHH|T
Chain T, Structure Of Pisum Sativum Rubisco
gi|410563180|pdb|4HHH|U Chain U, Structure Of Pisum
Sativum Rubisco gi|410563181|pdb|4HHH|V Chain V,
Structure Of Pisum Sativum Rubisco
Length = 123
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPGY 401
DP QVLKEL+EV +P AFVR+IGFN RQVQ +SFIAH P Y
Sbjct: 79 DPAQVLKELDEVKKEYPRAFVRVIGFNNVRQVQCISFIAHTPESY 123
>emb|CAA59218.1| ribulose-bisphosphate carboxylase [synthetic construct]
gi|77554374|gb|ABA97170.1| Ribulose bisphosphate
carboxylase small chain A, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
Length = 128
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPG 404
D QVLKELEE +P+AFVRIIGF+ RQVQ++SFIA++PPG
Sbjct: 78 DATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 121
>ref|NP_001066607.1| Os12g0292400 [Oryza sativa Japonica Group]
gi|77554383|gb|ABA97179.1| Ribulose bisphosphate
carboxylase small chain C, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|77554384|gb|ABA97180.1| Ribulose bisphosphate
carboxylase small chain C, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113649114|dbj|BAF29626.1| Os12g0292400 [Oryza sativa
Japonica Group] gi|125579070|gb|EAZ20216.1| hypothetical
protein OsJ_35820 [Oryza sativa Japonica Group]
gi|149390921|gb|ABR25478.1| ribulose bisphosphate
carboxylase small chain c [Oryza sativa Indica Group]
gi|215687018|dbj|BAG90832.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215687290|dbj|BAG91855.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 175
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPG 404
D QVLKELEE +P+AFVRIIGF+ RQVQ++SFIA++PPG
Sbjct: 125 DATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
>ref|NP_001066606.1| Os12g0291400 [Oryza sativa Japonica Group]
gi|77554377|gb|ABA97173.1| Ribulose bisphosphate
carboxylase small chain A, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|108862507|gb|ABG21973.1| Ribulose bisphosphate
carboxylase small chain A, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113649113|dbj|BAF29625.1| Os12g0291400 [Oryza sativa
Japonica Group] gi|125579068|gb|EAZ20214.1| hypothetical
protein OsJ_35814 [Oryza sativa Japonica Group]
gi|215704569|dbj|BAG94202.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 175
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2
Query: 535 DPVQVLKELEEVSTLHPEAFVRIIGFNPKRQVQIVSFIAHRPPG 404
D QVLKELEE +P+AFVRIIGF+ RQVQ++SFIA++PPG
Sbjct: 125 DATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168