BLASTX nr result
ID: Mentha28_contig00037382
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00037382
(427 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza] 88 1e-23
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus... 89 8e-16
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 74 2e-11
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 73 4e-11
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 71 2e-10
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 67 3e-09
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 61 1e-07
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 61 1e-07
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 61 2e-07
gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana] 61 2e-07
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 60 4e-07
gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus no... 56 4e-06
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr... 56 4e-06
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 55 1e-05
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 55 1e-05
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 55 1e-05
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ... 55 1e-05
>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
Length = 898
Score = 88.2 bits (217), Expect(2) = 1e-23
Identities = 40/68 (58%), Positives = 53/68 (77%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QLL L+KLEFRKLFLLLSYA Q LEDVLT ++AN++Y LPM +FE +IW+++G+++
Sbjct: 158 QLLTLNKLEFRKLFLLLSYANGQKLEDVLTTEEANQVYANKALPMPEFERLIWDKFGYRY 217
Query: 100 CEQPDRIQ 77
C DR Q
Sbjct: 218 CNGLDRSQ 225
Score = 47.4 bits (111), Expect(2) = 1e-23
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -3
Query: 425 LHSSSSNLQRTGFQSTSCRLSFEEEAQESRTSASTLS 315
L SS SNLQ TGFQ+ SC+LSFE+EA ESR + +S
Sbjct: 120 LQSSLSNLQGTGFQNISCQLSFEDEALESRNESMAIS 156
>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus guttatus]
Length = 878
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/72 (58%), Positives = 54/72 (75%)
Frame = -1
Query: 292 TICLQLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRY 113
TI QL+ L+KLE+RKLFL+LSY R+ LEDV+TV+DA+EIYRM PM FE IW +Y
Sbjct: 63 TITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENKIWKKY 122
Query: 112 GHKFCEQPDRIQ 77
G +F ++ DR Q
Sbjct: 123 GQRFYDESDRSQ 134
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QLL L+KLEFRK FL+L+Y R+ +EDV+T+ D +I M PM+ FE+ IWN+YGH
Sbjct: 187 QLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVGDILDMIYQPMSHFESYIWNKYGH-L 245
Query: 100 CEQPDRIQ 77
CE R+Q
Sbjct: 246 CEHNKRVQ 253
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 73.2 bits (178), Expect = 4e-11
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QLL LSKLEFRK FL+L+Y R+ +EDV+ + D +I M PM+ FE+ IWN+YGH
Sbjct: 243 QLLALSKLEFRKFFLILNYIGRRKVEDVIMLHDVGDILDMIYQPMSHFESYIWNKYGH-L 301
Query: 100 CEQPDRIQ 77
CE R+Q
Sbjct: 302 CEHNKRVQ 309
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = -1
Query: 295 PTICLQLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNR 116
P + QL+IL++LEFRKLFL+LSY + LED+++ A++I R L MTDFE+ IWN
Sbjct: 155 PNVSQQLMILNELEFRKLFLVLSYIGCKKLEDIVSPQIADDIVRKKNLSMTDFESEIWNA 214
Query: 115 YGHKFCEQPDR 83
+G + + DR
Sbjct: 215 FGKAYYAESDR 225
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 67.0 bits (162), Expect = 3e-09
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = -1
Query: 295 PTICLQLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNR 116
P + QL+IL++LEFRKLFL+LSY LEDV++ A++I R L MTDFE+ IWN
Sbjct: 153 PYVSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKKNLSMTDFESEIWNA 212
Query: 115 YGHKFCEQPDR 83
+G DR
Sbjct: 213 FGKACYAVSDR 223
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QL+ L +LEF+K FLLLSY Q L +V+T A EI R LPM +E +W+ G KF
Sbjct: 144 QLVALGELEFKKAFLLLSYIPGQRLGEVVT---AEEIRRWKDLPMVAYEAAVWDSLGRKF 200
Query: 100 CEQPDR--IQVSSG 65
C Q D +Q SG
Sbjct: 201 CPQTDERVLQWDSG 214
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QL+ L +LEF+K+FLLLSY Q++ V+T D EI LPM ++E +W+R G +
Sbjct: 130 QLVALGELEFKKVFLLLSYIPGQHVGQVITAD---EIRLWKDLPMVEYEAAVWDRLGRHY 186
Query: 100 CEQPDR--IQVSSG 65
C Q DR +Q SG
Sbjct: 187 CPQKDRRMLQWDSG 200
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QL+ L +LEFRK FL+LSY + ED+L+ A EI ++ LPM FET +WN G KF
Sbjct: 101 QLVALGELEFRKAFLILSYIGDKRPEDLLS---AEEILKLKNLPMGVFETEVWNNLGRKF 157
Query: 100 CEQPDR 83
++ DR
Sbjct: 158 IKEEDR 163
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/66 (48%), Positives = 42/66 (63%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QL+ L +LEFRK FL+LSY ED+L+ A EI ++ LPM FET +WN G KF
Sbjct: 101 QLVALGELEFRKAFLILSYIGELRPEDLLS---AEEILKLKNLPMGVFETEVWNNLGRKF 157
Query: 100 CEQPDR 83
++ DR
Sbjct: 158 IKEEDR 163
>gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]
Length = 929
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QL+ L +LEF+K+FLLLSY Q++ V+T D EI LPM ++E +W+R G +
Sbjct: 130 QLVALGELEFKKVFLLLSYIPGQHVGQVITAD---EIRLWKDLPMVEYEAAVWDRLGRHY 186
Query: 100 CEQPDR 83
C Q DR
Sbjct: 187 CPQKDR 192
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QL+ L +LEF+K FLLLSY Q L V T D EI LPM +E +W+R G ++
Sbjct: 140 QLVALGELEFKKAFLLLSYIPGQQLGQVTTAD---EIRLWKDLPMVAYEAAVWDRLGRRY 196
Query: 100 CEQPDR--IQVSSG 65
C Q DR +Q SG
Sbjct: 197 CPQTDRRMLQWDSG 210
>gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus notabilis]
Length = 529
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
Q+ L +LEFRK FL+L+Y R L+ V T A EI + L M FE +W R+G K+
Sbjct: 119 QMEALGELEFRKQFLILNYIGRNELQSVTT---AEEIRSLKNLSMVQFEKQVWQRFGEKY 175
Query: 100 CEQPDR 83
+Q DR
Sbjct: 176 VDQEDR 181
>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
gi|557110063|gb|ESQ50360.1| hypothetical protein
EUTSA_v10001896mg [Eutrema salsugineum]
Length = 988
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
QLL L +LEF+K FLLLSY ++L +V A+EI ++ LPM +E +W+R+G +
Sbjct: 133 QLLALGELEFKKAFLLLSYIPGKSLAEVTIT--ADEIRQLKDLPMVAYEAAVWHRFGQQC 190
Query: 100 CEQPDR 83
C +R
Sbjct: 191 CSPKER 196
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 55.1 bits (131), Expect = 1e-05
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
Q + L +LEFRK FL+LSY +LE+V+T D EI M L M FE+ +W + G K
Sbjct: 148 QYVALGELEFRKAFLILSYIGENSLEEVITAD---EIRGMRDLQMARFESEVWEKLGRKN 204
Query: 100 CEQPDR 83
Q DR
Sbjct: 205 ISQEDR 210
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 55.1 bits (131), Expect = 1e-05
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = -1
Query: 280 QLLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
Q + L +LEFRK FL+LSY +LE+V+T D EI M L M FE+ +W + G K
Sbjct: 150 QYVALGELEFRKAFLILSYIGENSLEEVITAD---EIRGMRDLQMARFESEVWEKLGRKN 206
Query: 100 CEQPDR 83
Q DR
Sbjct: 207 ISQEDR 212
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -1
Query: 277 LLILSKLEFRKLFLLLSYAKRQNLEDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKFC 98
L L +LEFRK FLL+SYA R+N+E+V+T A + + L M +FE IW G K+
Sbjct: 134 LTALGELEFRKSFLLMSYAGRENIENVVT---AEYVRSLKELTMKNFEKEIWETVGQKYI 190
Query: 97 EQP-DRI 80
E+P DR+
Sbjct: 191 ERPTDRL 197
>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 934
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = -1
Query: 277 LLILSKLEFRKLFLLLSYAKRQNL-EDVLTVDDANEIYRMGGLPMTDFETIIWNRYGHKF 101
LL L +LEF+K FLLLSY ++L E+V++ D EI + LPM ++E +WNR G ++
Sbjct: 133 LLALGELEFKKAFLLLSYIGGESLVEEVISGD---EIRKWKDLPMVEYEAEVWNRLGQRY 189
Query: 100 CEQPDR 83
C +R
Sbjct: 190 CPPKER 195