BLASTX nr result
ID: Mentha28_contig00036939
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha28_contig00036939 (472 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 257 1e-66 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 209 4e-52 gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 209 4e-52 gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 206 3e-51 gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 199 3e-49 gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 197 1e-48 gb|ABG22121.1| polyprotein [Solanum melongena] 197 1e-48 gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 197 2e-48 emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 196 3e-48 gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 195 6e-48 gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 195 6e-48 gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 194 8e-48 gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 192 3e-47 gb|AFB73912.1| polyprotein [Citrus sinensis] 189 3e-46 gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 189 3e-46 emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera] 189 3e-46 gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 188 8e-46 emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 188 8e-46 gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 187 1e-45 gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 187 1e-45 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 257 bits (657), Expect = 1e-66 Identities = 123/157 (78%), Positives = 145/157 (92%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDSYM++LGY RS YDCCVY+N+ +D S IYLVLYVDDMLIAAK K DI+KLK LLSAE Sbjct: 954 RFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAE 1013 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 F+MKDLGAA+KILGMEI R+RE+RKLFLSQ+SYI+K+L+RFGMS++KPIDTP AANIHL+ Sbjct: 1014 FEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLT 1073 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 + +AP+SE EKEYMSRVPYA+AVGSLMYAMVCTRPD+ Sbjct: 1074 AMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDL 1110 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 209 bits (531), Expect = 4e-52 Identities = 107/157 (68%), Positives = 126/157 (80%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M+ + RS YD CVY K DGS IYL+LYVDDMLIAAK KS+I KLKA LS+E Sbjct: 1186 RFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSE 1244 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 F+MKDLGAAKKILGMEI R+R KL+LSQK YIEK+L RF M AKP+ TP AA+ LS Sbjct: 1245 FEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLS 1304 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 SD P+S+ + EYMSRVPY++AVGSLMYAMVC+RPD+ Sbjct: 1305 SDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVCSRPDL 1341 >gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1243 Score = 209 bits (531), Expect = 4e-52 Identities = 108/157 (68%), Positives = 125/157 (79%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M+ + S YD CVY K DGS+IYL+LYVDDMLIAAK KS+IEKLKA LS+E Sbjct: 951 RFDSFMLSQKFRISNYDSCVYL-KVVDGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSE 1009 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 F+MKDLGAAKKILGMEI RER KL+LSQK YIEK+L RF M AKP+ TP AA+ LS Sbjct: 1010 FEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLS 1069 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 SD P S+ + EYMSRVPY++AVGSLMYAMVC RPD+ Sbjct: 1070 SDLCPLSDYDIEYMSRVPYSSAVGSLMYAMVCCRPDL 1106 >gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1211 Score = 206 bits (524), Expect = 3e-51 Identities = 107/157 (68%), Positives = 123/157 (78%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M + RS YD CVY K DGS IYL+LYVDDMLIAAK KS+IEKLKA LS+E Sbjct: 858 RFDSFMFSQKFRRSNYDSCVYL-KVVDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSE 916 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 F+MKDLGAAKKILGMEI RER KL+LSQK YIEK+L RF M AKP+ TP AA+ LS Sbjct: 917 FEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLS 976 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 SD P+S+ + EYMSRVPY + VGSLMYAMVC+R D+ Sbjct: 977 SDLCPQSDYDIEYMSRVPYLSVVGSLMYAMVCSRLDL 1013 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 199 bits (506), Expect = 3e-49 Identities = 105/157 (66%), Positives = 122/157 (77%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M+ + RS YD CVY K DGS IYL+LYVDDMLIAAK KS+I KLKA LS+E Sbjct: 888 RFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSE 946 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 F+MKDLGAAKKILGMEI RER KL+LSQK YIEK+L RF M AK + T AA+ LS Sbjct: 947 FEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVSTLLAAHFRLS 1006 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 SD P+S + EYMSRVPY++AV SLMYAMVC+RPD+ Sbjct: 1007 SDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCSRPDL 1043 >gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1138 Score = 197 bits (501), Expect = 1e-48 Identities = 101/149 (67%), Positives = 119/149 (79%) Frame = +2 Query: 26 LGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAEFDMKDLGA 205 L + RS YD CVY K DGS IYL+LYVDDMLIAAK KS+I KLKA LS+EF+MKDLGA Sbjct: 793 LKFRRSNYDSCVYP-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGA 851 Query: 206 AKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLSSDYAPKSE 385 AKKILG+EI +ER KL+LSQK YIEK+L RF M AKP+ TP AA+ LSSD P+S+ Sbjct: 852 AKKILGIEITKERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSD 911 Query: 386 AEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 + EYMSRVPY++ VGSLMYAMVC+RPD+ Sbjct: 912 YDIEYMSRVPYSSVVGSLMYAMVCSRPDL 940 >gb|ABG22121.1| polyprotein [Solanum melongena] Length = 361 Score = 197 bits (501), Expect = 1e-48 Identities = 97/158 (61%), Positives = 127/158 (80%), Gaps = 1/158 (0%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 +FD +M Y RS YD CVY +K +GS +YL+LYVDDMLIAAKS+ +I++LKA LS E Sbjct: 51 QFDKFMQDQRYTRSKYDHCVYFHKLQNGSYVYLLLYVDDMLIAAKSQFEIDRLKAQLSKE 110 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMS-TAKPIDTPCAANIHL 358 F+MKDLG AKKILGMEI R+R++ KL L+QK Y++K+L RFG++ +KP+ TP A ++ L Sbjct: 111 FEMKDLGEAKKILGMEISRDRQRGKLCLTQKQYLKKVLQRFGINDDSKPVSTPLAPHLKL 170 Query: 359 SSDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 SS +PK++ E+EYM++VPYANAVGSLMYAMVCTR DI Sbjct: 171 SSQLSPKTDEEREYMAKVPYANAVGSLMYAMVCTRSDI 208 >gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 983 Score = 197 bits (500), Expect = 2e-48 Identities = 103/150 (68%), Positives = 119/150 (79%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M+ + RS YD CVY K DGS IYL+LYVDDMLIAAK KS+IEKLKA LS+E Sbjct: 721 RFDSFMLSQKFRRSNYDNCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSE 779 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 F+MKDLGAAKKILGMEI RER KL+LSQK YIEK+L RF M AKP+ TP AA+ S Sbjct: 780 FEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRSS 839 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAM 451 SD P+S+ + EYMSRVPY++AVGSLMYAM Sbjct: 840 SDLCPQSDYDIEYMSRVPYSSAVGSLMYAM 869 >emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] Length = 1335 Score = 196 bits (498), Expect = 3e-48 Identities = 101/157 (64%), Positives = 123/157 (78%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M+ + RS YD CVY K +GS IYL+LYVDDMLIAAKSK +I KLK LLS+E Sbjct: 982 RFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSE 1040 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMKDLG+AKKILGMEI R+R+ LFLSQ +YI+K+L RF M AK + TP A + LS Sbjct: 1041 FDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLS 1100 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 + P ++AE EYMSRVPY++AVGSLMYAMVC+RPD+ Sbjct: 1101 AAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDL 1137 >gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1333 Score = 195 bits (495), Expect = 6e-48 Identities = 101/157 (64%), Positives = 122/157 (77%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M+ + RS YD CVY K +GS IYL+LYVDDMLIAAKSK +I KLK LLS+E Sbjct: 980 RFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSE 1038 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMKDLG+AKKILGMEI R+R+ LFLSQ +YI+K+L RF M AK + TP A + LS Sbjct: 1039 FDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLS 1098 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 + P +AE EYMSRVPY++AVGSLMYAMVC+RPD+ Sbjct: 1099 AAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDL 1135 >gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77549942|gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1373 Score = 195 bits (495), Expect = 6e-48 Identities = 101/157 (64%), Positives = 122/157 (77%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M+ + RS YD CVY K +GS IYL+LYVDDMLIAAKSK +I KLK LLS+E Sbjct: 980 RFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSE 1038 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMKDLG+AKKILGMEI R+R+ LFLSQ +YI+K+L RF M AK + TP A + LS Sbjct: 1039 FDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLS 1098 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 + P +AE EYMSRVPY++AVGSLMYAMVC+RPD+ Sbjct: 1099 AAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDL 1135 >gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] Length = 1305 Score = 194 bits (494), Expect = 8e-48 Identities = 93/157 (59%), Positives = 118/157 (75%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+++ LGYNR D C Y+ + DDG I L+LYVDDML+ +K +++LKA L+ E Sbjct: 950 RFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQELKAQLARE 1009 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMKDLG A KILGM+I+R+R+ RK++LSQK+Y++K+L RF M PI TP N LS Sbjct: 1010 FDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLS 1069 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 S P SEAE+ MSRVPYA+AVGSLMYAM+CTRPDI Sbjct: 1070 SSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRPDI 1106 >gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1333 Score = 192 bits (489), Expect = 3e-47 Identities = 100/157 (63%), Positives = 122/157 (77%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M+ + RS YD CVY K +GS IYL+LYVDDMLIAAKSK +I KLK LLS+E Sbjct: 980 RFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSE 1038 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMKDLG+AKKIL MEI R+R+ LFLSQ +YI+K+L RF M AK + TP A + LS Sbjct: 1039 FDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLS 1098 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 + P ++AE EYMSRVPY++AVGSLMYAMVC+RPD+ Sbjct: 1099 AAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDL 1135 >gb|AFB73912.1| polyprotein [Citrus sinensis] Length = 1309 Score = 189 bits (481), Expect = 3e-46 Identities = 91/157 (57%), Positives = 118/157 (75%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+++ LGYNR D C Y+ + +D I L+LYVDDML+A +K I++LKA L+ E Sbjct: 954 RFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLARE 1013 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 F+MKDLG A KILGM+I+R+R RK++LSQK+Y++KIL RF M K I TP N LS Sbjct: 1014 FEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNMQDCKSISTPLPVNFKLS 1073 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 S P +EAE++ MSRVPYA+AVGSLM+AM+CTRPDI Sbjct: 1074 SSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRPDI 1110 >gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 189 bits (481), Expect = 3e-46 Identities = 91/157 (57%), Positives = 116/157 (73%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS++I L YNR D C Y+ + D I L+LYVDDML+ +K +++LKA L+ E Sbjct: 950 RFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLARE 1009 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMKDLG A KILGM+I+R+R+ RK++LSQK+Y+ K+L RF M KPI TP N LS Sbjct: 1010 FDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLS 1069 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 S +P +EAE+ MSRVPYA+AVGSLMYAM+CTRPDI Sbjct: 1070 SGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDI 1106 >emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera] Length = 367 Score = 189 bits (481), Expect = 3e-46 Identities = 93/158 (58%), Positives = 119/158 (75%), Gaps = 1/158 (0%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVY-HNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSA 178 RF+SY+I++GY R YDCCVY N DD S I+L+LYVDDMLI KS ++ KLK+LLS Sbjct: 53 RFESYIIRIGYKRCEYDCCVYVKNLDDDSSFIFLLLYVDDMLIVVKSMVEVNKLKSLLSK 112 Query: 179 EFDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHL 358 EFDMKDLGA KKILGMEI+ +R +L+LSQ +Y++++L RF M AKP+ TP A + L Sbjct: 113 EFDMKDLGATKKILGMEIHGDRALGRLWLSQHNYVKRMLERFNMDNAKPVSTPLANHFRL 172 Query: 359 SSDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 S+ PK++ E MS+VPYA+AVG LMYAMVCTR D+ Sbjct: 173 STSQCPKTDGEVNDMSKVPYASAVGCLMYAMVCTRLDL 210 >gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 188 bits (477), Expect = 8e-46 Identities = 90/157 (57%), Positives = 116/157 (73%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS++I L YNR D C Y+ + D I L+LYVDD+L+ +K +++LKA L+ E Sbjct: 950 RFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDILVVGPNKDRVQELKAQLARE 1009 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMKDLG A KILGM+I+R+R+ RK++LSQK+Y+ K+L RF M KPI TP N LS Sbjct: 1010 FDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLS 1069 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 S +P +EAE+ MSRVPYA+AVGSLMYAM+CTRPDI Sbjct: 1070 SGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDI 1106 >emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] Length = 595 Score = 188 bits (477), Expect = 8e-46 Identities = 92/157 (58%), Positives = 120/157 (76%), Gaps = 1/157 (0%) Frame = +2 Query: 5 FDSYMIQLGYNRSPYDCCVYHNKADD-GSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 FDSY+I++GY R YDC VY DD S I+L+LYVDDMLIAAKS ++ KLK+LLS E Sbjct: 325 FDSYIIRIGYKRCEYDCFVYVKSLDDDSSFIFLLLYVDDMLIAAKSMVEVNKLKSLLSKE 384 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMK+L AAKKI+GMEI+R+R R+L+LSQ SY++++ RF M AKP+ TP A + LS Sbjct: 385 FDMKELDAAKKIIGMEIHRDRASRRLWLSQYSYVKRVFERFNMDDAKPVSTPLANHFRLS 444 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 ++ PK++ E + MS+VPYA+AVG MYAMVC RPD+ Sbjct: 445 TNQCPKTBDEVKDMSKVPYASAVGCFMYAMVCIRPDL 481 >gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 187 bits (476), Expect = 1e-45 Identities = 90/157 (57%), Positives = 116/157 (73%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS++I L Y+R D C Y+ + D I L+LYVDDML+ +K +++LKA L+ E Sbjct: 950 RFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLARE 1009 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMKDLG A KILGM+I+R+R+ RK++LSQK+Y+ K+L RF M KPI TP N LS Sbjct: 1010 FDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLS 1069 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 S +P +EAE+ MSRVPYA+AVGSLMYAM+CTRPDI Sbjct: 1070 SGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDI 1106 >gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group] gi|53370655|gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica Group] gi|108710286|gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1322 Score = 187 bits (476), Expect = 1e-45 Identities = 98/157 (62%), Positives = 119/157 (75%) Frame = +2 Query: 2 RFDSYMIQLGYNRSPYDCCVYHNKADDGSMIYLVLYVDDMLIAAKSKSDIEKLKALLSAE 181 RFDS+M+ G+ RS +D CVY K +GS IYL+LYVDDMLIAAKSK I LK LS+E Sbjct: 969 RFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSE 1027 Query: 182 FDMKDLGAAKKILGMEIYREREQRKLFLSQKSYIEKILSRFGMSTAKPIDTPCAANIHLS 361 FDMKDLGAAKKILGMEI R+R LFLSQ+SYI+K+L RF M AKP+ TP A + LS Sbjct: 1028 FDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLS 1087 Query: 362 SDYAPKSEAEKEYMSRVPYANAVGSLMYAMVCTRPDI 472 + ++ + EYMSRVPY++AVGSLMYAMVC+ PD+ Sbjct: 1088 ALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSWPDL 1124