BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00036685
         (668 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU43536.1| hypothetical protein MIMGU_mgv1a001173mg [Mimulus...   281   1e-73
gb|EPS63838.1| hypothetical protein M569_10945, partial [Genlise...   261   2e-67
ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat...   245   1e-62
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat...   241   2e-61
gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]     241   2e-61
ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat...   240   3e-61
ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat...   240   3e-61
ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat...   240   3e-61
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...   238   1e-60
ref|XP_007204493.1| hypothetical protein PRUPE_ppa019635mg [Prun...   235   1e-59
ref|XP_002308333.2| pentatricopeptide repeat-containing family p...   234   2e-59
ref|XP_007028037.1| Pentatricopeptide repeat (PPR) superfamily p...   234   2e-59
ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Caps...   232   9e-59
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat...   231   1e-58
ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutr...   230   3e-58
ref|XP_007145770.1| hypothetical protein PHAVU_007G266200g [Phas...   229   8e-58
ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat...   228   2e-57
ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat...   227   2e-57
ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citr...   226   5e-57
ref|XP_002871218.1| pentatricopeptide repeat-containing protein ...   226   7e-57

>gb|EYU43536.1| hypothetical protein MIMGU_mgv1a001173mg [Mimulus guttatus]
          Length = 873

 Score =  281 bits (720), Expect = 1e-73
 Identities = 130/176 (73%), Positives = 159/176 (90%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALAL+++IG EKNLL+QYTYGS +H LLR GRLE+AL KIK M++ G+ PTVHVYTSLII
Sbjct: 682  ALALMDKIGSEKNLLDQYTYGSLIHCLLRRGRLEDALAKIKCMEKQGVHPTVHVYTSLII 741

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            +FLK++++NRAL TLEEMK++GCQPTIVTYSALICGYVR GK+++AWDVF ++K+NGP P
Sbjct: 742  YFLKEKEINRALETLEEMKKRGCQPTIVTYSALICGYVRLGKITEAWDVFGNIKKNGPLP 801

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMF+DCLCR G SE+A  LI+EMLHDGI+PST+NFR I++GLNREGKPDLA
Sbjct: 802  DFKTYSMFVDCLCRVGKSEEASRLISEMLHDGIIPSTINFRNIIYGLNREGKPDLA 857



 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 48/168 (28%), Positives = 85/168 (50%)
 Frame = +2

Query: 20  EIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDR 199
           EI  +KN+ ++  Y   +   LR   + EAL   +  K+ G   +V  YT+L+ H     
Sbjct: 247 EIMKKKNVFDENIYRILISTYLRRNEVAEALSLFEEAKKYG-NISVSTYTNLMQHLFWKN 305

Query: 200 DMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYS 379
           +  + L   +EM E G +   V  +A   GYVR   +S+AW+VF S+ + G  P  K+Y+
Sbjct: 306 EFQKGLELYDEMLEMGLELDCVAITAAAVGYVRKNCISEAWEVFMSMDEKGIKPTSKSYT 365

Query: 380 MFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
           +FI+ LC+  ++++    + EM    +      FR +   L ++G+ +
Sbjct: 366 IFINELCKVCSTDEIIKTLNEMKVRKVNIQDDIFRHVRSHLKKKGETE 413


>gb|EPS63838.1| hypothetical protein M569_10945, partial [Genlisea aurea]
          Length = 913

 Score =  261 bits (666), Expect = 2e-67
 Identities = 121/177 (68%), Positives = 153/177 (86%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIK-SMKQTGIQPTVHVYTSLI 178
            ALAL+++ G  K +LEQYTYGS +HG LR G+LE+AL K+K  MKQ GI PTVHVYT+LI
Sbjct: 721  ALALIDKSGSVKAVLEQYTYGSLIHGFLRKGQLEKALAKMKYMMKQYGIPPTVHVYTALI 780

Query: 179  IHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPS 358
            IHF+K+R++NRA+ TL+EMK++GCQPT+VT+SAL+CGYVR+G+V DAW++F  LKQNGP 
Sbjct: 781  IHFIKEREINRAIETLDEMKKEGCQPTVVTFSALVCGYVRTGQVEDAWNLFNELKQNGPL 840

Query: 359  PDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            PDFKTYSMFI+CLC+TGNSEDA  LI EM+ DG+ PST+NFR I++GLNRE KP+LA
Sbjct: 841  PDFKTYSMFIECLCKTGNSEDALKLIDEMVEDGMSPSTINFREIIWGLNREDKPELA 897



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 46/166 (27%), Positives = 80/166 (48%)
 Frame = +2

Query: 20  EIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDR 199
           EI  +K  +++  YG  +   L+  R+ EA       K++GI  +   YT L+ H  +  
Sbjct: 275 EIMKKKGAVDENVYGILISEYLKRSRVFEASTLFDEAKKSGIVTSAATYTELMQHHFRKN 334

Query: 200 DMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYS 379
           +  + +    EM E G +P+    +++  GYVR  ++ +AW+VFRS  + G  P    Y 
Sbjct: 335 EFQKGMDLYREMLETGIRPSSDAIASVAAGYVRKNRIREAWEVFRSANEKGIQPTSDGYL 394

Query: 380 MFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGK 517
           +F+D LCR   + +    + EM    I      F+ I   L ++G+
Sbjct: 395 IFVDELCRASKTNEVLEALNEMQASEINIPQKMFKMIESYLEKKGE 440



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
 Frame = +2

Query: 86  RSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNRALATLEEMKEQGCQPTIV 265
           ++G L ++L   + MK+TGIQP    Y +++I   ++     AL     M     +  + 
Sbjct: 122 KAGMLAKSLILFEEMKKTGIQPDATAYRTMVIALCRNGQTELALEFYRAMVRNEMEVDLA 181

Query: 266 TYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLCRTGNSEDAFTLITEM 445
            Y  L+     SG V     +   + +    P+ +  S+ +  LC  G  E++  LI + 
Sbjct: 182 VYKRLLQSLAFSGNVDAVRSIGEEMTKLSEIPESRAQSLMLKSLCTAGRIEESLELIGDA 241

Query: 446 LHDG-IVPSTVNFRTIMFGLNREGK 517
           ++ G  +  T  F T++ GL R  K
Sbjct: 242 MNKGTALDDTATFGTLVKGLCRRNK 266


>ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Solanum lycopersicum]
          Length = 1092

 Score =  245 bits (625), Expect = 1e-62
 Identities = 118/176 (67%), Positives = 144/176 (81%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALAL+NE+  E+++L QY YGS VHGLL+ G LEEAL +I+SMKQTGI PTVHVYTSLI 
Sbjct: 899  ALALINEVDDEQHVLSQYVYGSLVHGLLQKGNLEEALARIESMKQTGIHPTVHVYTSLIG 958

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            +F K + +++AL T +EMK+ GCQPTIVTYSALI GY+  GKVS+A DVF  +K+NGP P
Sbjct: 959  YFFKVKQVSKALQTFKEMKDSGCQPTIVTYSALIRGYMNVGKVSEARDVFHQMKKNGPYP 1018

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DF  YSMFI CLCR GNSE+A  LI+EML+ GI+PSTVN+RT+ +GLNREGK DLA
Sbjct: 1019 DFNAYSMFISCLCRIGNSEEALQLISEMLNIGIIPSTVNYRTVFYGLNREGKQDLA 1074



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 47/171 (27%), Positives = 84/171 (49%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V EI  ++N  ++  Y   +   LR   + +AL   +SMK +G    V  YT+L+ 
Sbjct: 443 ALEIV-EILKKRNGADEKVYAVLISAYLRRNEISKALNLFQSMKDSGSLLNVSTYTNLMQ 501

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
              + ++   AL    EM E G +   V  +A++ GY+   ++S+ W VF ++K  G   
Sbjct: 502 RLFRVKEFQEALNLYNEMTEMGVKLDAVAATAVVAGYIIQNRISEMWQVFENMKDKGIVF 561

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREG 514
             K+Y +F+  L +   + D F ++ EM    +      F+ ++  L R+G
Sbjct: 562 TRKSYLIFVKELTKVSGTTDIFKVLNEMKASKMCIGNDIFQYVISYLERKG 612



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
 Frame = +2

Query: 5   LALVNEIGCEK----NLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTS 172
           +A V+++G +     ++ E + Y   +     +GR+ EALE I+ +K   +     ++T+
Sbjct: 370 IAAVHKVGDDMIRVCSIPENHVYRLMLKSFCITGRITEALELIRDLKSKNMNLDSEIFTT 429

Query: 173 LIIHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNG 352
           L+    K   +N AL  +E +K++      V Y+ LI  Y+R  ++S A ++F+S+K +G
Sbjct: 430 LVKGLCKAERINDALEIVEILKKRNGADEKV-YAVLISAYLRRNEISKALNLFQSMKDSG 488

Query: 353 PSPDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFG 499
              +  TY+  +  L R    ++A  L  EM   G+    V    ++ G
Sbjct: 489 SLLNVSTYTNLMQRLFRVKEFQEALNLYNEMTEMGVKLDAVAATAVVAG 537



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
 Frame = +2

Query: 128  MKQTGIQPTVHVYTSLIIHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYV--RS 301
            M++ G   T H +T +I+ + +    + A+ T +EMK  GC+PT  TY ALI      + 
Sbjct: 765  MRRNGCLVTAHTWTIMIMLYGRTGLTDIAVRTFKEMKHSGCKPTESTYKALITSLCQKKG 824

Query: 302  GKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDG 457
             ++ +A  +F+ + Q G SPD +    ++ CLC  G   DA +    +L  G
Sbjct: 825  RRIDEAVKIFQEMIQVGYSPDKELIEDYLGCLCELGKLRDARSCTESLLKLG 876



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 28/108 (25%), Positives = 50/108 (46%)
 Frame = +2

Query: 140 GIQPTVHVYTSLIIHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDA 319
           G   T   Y ++I      ++       +EEM+   C+  + T+S L+  Y     +  A
Sbjct: 244 GFSHTTETYNTMIYMAADCKEFRLVDELVEEMERSSCRKNLKTWSILLSHYGNGKLIGKA 303

Query: 320 WDVFRSLKQNGPSPDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIV 463
             +F  LK+ G  PD + Y++ +  LC  G ++ A     EM+H G++
Sbjct: 304 LSLFEQLKKLGYEPDLRAYTIMLSSLCNAGKADIALEYFNEMIHKGLM 351



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
 Frame = +2

Query: 26   GCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFL--KDR 199
            GC   L+  +T+   +    R+G  + A+   K MK +G +PT   Y +LI      K R
Sbjct: 769  GC---LVTAHTWTIMIMLYGRTGLTDIAVRTFKEMKHSGCKPTESTYKALITSLCQKKGR 825

Query: 200  DMNRALATLEEMKEQGCQP---TIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFK 370
             ++ A+   +EM + G  P    I  Y   +C     GK+ DA     SL + G S    
Sbjct: 826  RIDEAVKIFQEMIQVGYSPDKELIEDYLGCLC---ELGKLRDARSCTESLLKLGFSTPL- 881

Query: 371  TYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREG 514
             YS++I  LCR    E+A  LI E+  +  V S   + +++ GL ++G
Sbjct: 882  AYSLYIRSLCRAWRLEEALALINEVDDEQHVLSQYVYGSLVHGLLQKG 929


>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score =  241 bits (615), Expect = 2e-61
 Identities = 116/176 (65%), Positives = 141/176 (80%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALALV+E+G E+  L+QY YGS VHGLLR GRL+EALEK+ SMKQ GI PTVHVYTSLI+
Sbjct: 857  ALALVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSMKQIGIHPTVHVYTSLIV 916

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF K++ M +AL T ++MKE+GC+PTIVTYSALI G++  G   DA +VF  L+  GP P
Sbjct: 917  HFFKEKQMRKALETFQKMKEEGCEPTIVTYSALIRGHMAMGNFVDARNVFGLLQLKGPFP 976

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMFI CLC+ G SE+A  L++EML  GI+PST+NFRT+MFGLNREGK  LA
Sbjct: 977  DFKTYSMFISCLCKVGKSEEALQLLSEMLDSGIIPSTINFRTVMFGLNREGKHSLA 1032



 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 45/173 (26%), Positives = 95/173 (54%)
 Frame = +2

Query: 8   ALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHF 187
           A + +I  ++ +++   YG  + G LR   + +A + +++M ++G  PT+  YT L+ H 
Sbjct: 400 AEIVDIMKKRKVVDAKVYGIIISGYLRRNDIPKAFDVLQTMTESGYLPTISTYTELMQHL 459

Query: 188 LKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDF 367
            +  +  +     +EM E+G +P  V  +A++ G+VR   + +AW VF S+++ G    +
Sbjct: 460 FRLNEYQKGCKLYDEMLERGVEPDSVAITAMVAGHVRQNHIFEAWKVFNSMQERGIRATW 519

Query: 368 KTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDL 526
           K+YS+FI  LC+   +++   ++ EM    I+     F  ++  L ++G+ ++
Sbjct: 520 KSYSVFIKELCKISRTDEVIKVLNEMQASKIIIGDEVFNWVISYLEKKGETEM 572


>gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]
          Length = 1039

 Score =  241 bits (614), Expect = 2e-61
 Identities = 116/176 (65%), Positives = 138/176 (78%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALAL +EIG EK  L+Q TYGS  HGLLR GR+EEAL K+ SMK TGI PTVHVYTSLI+
Sbjct: 846  ALALADEIGEEKTTLDQSTYGSIFHGLLRKGRVEEALAKMDSMKATGINPTVHVYTSLIV 905

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HFLK++ + +AL TL++M+E+GC+PTIVTYSA I GYV  G + +AW+VF  +K  GP P
Sbjct: 906  HFLKEKQIQKALETLQKMREEGCEPTIVTYSAFIKGYVNMGNIGEAWNVFYLMKVKGPLP 965

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DF+TYSMFI CLC  G SE+A  LI EML+ GIVPSTVNFRT+  GLNREGK  LA
Sbjct: 966  DFRTYSMFISCLCNVGKSEEAVRLIDEMLNSGIVPSTVNFRTVFHGLNREGKQSLA 1021



 Score =  100 bits (248), Expect = 5e-19
 Identities = 51/166 (30%), Positives = 89/166 (53%)
 Frame = +2

Query: 20  EIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDR 199
           EI   + L++   YG  ++G LR     +AL+  +SMK+ G  P    YT L+ H  + +
Sbjct: 395 EIMKRRQLVDGNVYGIIINGYLRRNDTSKALDLFQSMKEVGHCPKASTYTELMQHLFRLK 454

Query: 200 DMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYS 379
              +      EM E+G +   V  +A++ G+VR+ +VS+AW VFRS++  G  P +K YS
Sbjct: 455 QYEKGCELYNEMLERGVERDSVAITAMVAGHVRANRVSEAWKVFRSMEDKGVWPTWKAYS 514

Query: 380 MFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGK 517
           +F+  LCR  N+++   ++ EM    I+        ++  L ++G+
Sbjct: 515 IFVKELCRISNTDEILKVLNEMRASEILIGDEVIHWVISHLEKKGE 560


>ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Solanum tuberosum]
          Length = 1087

 Score =  240 bits (613), Expect = 3e-61
 Identities = 118/176 (67%), Positives = 141/176 (80%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALAL+NE+  E+++L QY YGS VHGLL+ G+LEEAL +I+SMKQ GI PTVHVYTSLI 
Sbjct: 894  ALALINEVDDEQHVLSQYVYGSLVHGLLQKGQLEEALGRIESMKQAGIHPTVHVYTSLIG 953

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            +F K +   +AL T +EMK+ GCQPTIVTYSALI GY+  GKVS+A DVF  +K+NGP P
Sbjct: 954  YFFKVKQAGKALETFKEMKDSGCQPTIVTYSALIRGYMNVGKVSEARDVFHQMKKNGPYP 1013

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFK YSMFI CLCR G SE+A  LI+EML  GIVPSTVN+RT+ +GLNREGK DLA
Sbjct: 1014 DFKAYSMFISCLCRIGYSEEALQLISEMLDVGIVPSTVNYRTVFYGLNREGKQDLA 1069



 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 45/171 (26%), Positives = 87/171 (50%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V EI  ++N  ++  Y + +   LR   + +AL   +SMK +G    +  YT+L+ 
Sbjct: 438 ALEIV-EILKKRNGADEKVYAALISAYLRRNEISKALNLFQSMKDSGSLLNISTYTNLMQ 496

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  + ++   AL    EM E G +   V  +A++ GY+   ++S+ W+VF ++K  G   
Sbjct: 497 HLFRVKEFQEALNLYNEMTEMGVKLDAVAATAVVAGYIIQNRISEMWEVFENMKDKGIVF 556

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREG 514
             K++ +F+  L +   + D F ++ EM    +      ++ ++  L R+G
Sbjct: 557 TRKSHLIFVKELTKVSGTTDIFKVLNEMKASKMFIGNDIYQYVISYLERKG 607



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
 Frame = +2

Query: 5   LALVNEIGCEK----NLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTS 172
           +A V+++G +     ++ E   Y   +     +GR+ EALE I+ +K         ++T+
Sbjct: 365 IAAVHKVGDDMIRVCSIPENRVYSLMLKSFCIAGRITEALELIRDLKSKNKNLDSEIFTT 424

Query: 173 LIIHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNG 352
           L+    K   +N AL  +E +K++      V Y+ALI  Y+R  ++S A ++F+S+K +G
Sbjct: 425 LVKGLCKAERINDALEIVEILKKRNGADEKV-YAALISAYLRRNEISKALNLFQSMKDSG 483

Query: 353 PSPDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFG 499
              +  TY+  +  L R    ++A  L  EM   G+    V    ++ G
Sbjct: 484 SLLNISTYTNLMQHLFRVKEFQEALNLYNEMTEMGVKLDAVAATAVVAG 532



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = +2

Query: 128  MKQTGIQPTVHVYTSLIIHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYV--RS 301
            M++ G   T H +T +I+ + +    + A+ T +EMK+ GC+PT  TY ALI      + 
Sbjct: 760  MRRNGCLVTAHTWTIMIMQYGRTGLTDIAVHTFKEMKDSGCKPTESTYKALITSLCQKKG 819

Query: 302  GKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDG 457
             ++ +A  +F+ + Q G SPD +    ++ CLC  G   DA +    +L  G
Sbjct: 820  RRIDEAVKIFQEMIQVGHSPDKELIEDYLGCLCELGKLRDARSCTESLLKLG 871



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/108 (26%), Positives = 50/108 (46%)
 Frame = +2

Query: 140 GIQPTVHVYTSLIIHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDA 319
           G   T   Y ++I      ++       +EEM+   CQ  + T+S L+  Y     +  A
Sbjct: 239 GFSHTTETYNTMIYMAADCKEFRLVDELVEEMERSSCQKNLKTWSILLSHYGNGKLIGKA 298

Query: 320 WDVFRSLKQNGPSPDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIV 463
             +F  LK+ G  PD + Y++ +  LC  G ++ A     EM+H G++
Sbjct: 299 LSMFEQLKKLGYEPDLRAYTIMLSSLCNAGKADIALEYFNEMIHKGLM 346


>ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like isoform 2 [Fragaria vesca
            subsp. vesca]
          Length = 1037

 Score =  240 bits (612), Expect = 3e-61
 Identities = 109/176 (61%), Positives = 144/176 (81%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            A  ++++IG E++ L++YTYGSFVHGLLRSG++EEAL K++SMKQ G++PTVHVYTSLI+
Sbjct: 845  ASEMMDDIGEERSTLDRYTYGSFVHGLLRSGQVEEALAKMESMKQAGMKPTVHVYTSLIV 904

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HFLK++ + RAL    EM+++GC+PT+VTYS LI GY+     ++AW VF ++K  GPSP
Sbjct: 905  HFLKEKQIKRALEIFNEMQQEGCEPTVVTYSTLIRGYMNMEMTAEAWSVFHNMKLKGPSP 964

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMF+ CLC+ G SE+A  LITEML+ GI+PS VNFRT+ +GLNREGK DLA
Sbjct: 965  DFKTYSMFLHCLCKAGKSEEAMQLITEMLNSGIIPSVVNFRTVFYGLNREGKHDLA 1020



 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 44/164 (26%), Positives = 83/164 (50%)
 Frame = +2

Query: 32  EKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNR 211
           +++ ++   YG  ++G LR   +  AL+    MK++G  PT   YT L+ H     +  +
Sbjct: 403 KRDFVDGNVYGIIINGYLRKNDVSRALDLFHGMKESGYLPTTSTYTELMQHLFNMNEHQK 462

Query: 212 ALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFID 391
                +EM E+G +P  V  +A++ G+VR   +S+AW VF  +K  G  P  K+Y +FI 
Sbjct: 463 GCELYDEMLERGVEPDSVAVTAIVAGHVRQNHISEAWKVFIHMKDKGIKPTSKSYMVFIK 522

Query: 392 CLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
            LC+   +++   ++  M    +      F  ++  + ++G+ D
Sbjct: 523 ELCKISRTDEILKVLVHMQASDMRIQDEIFNWVILHMKKKGEMD 566



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 44/155 (28%), Positives = 69/155 (44%)
 Frame = +2

Query: 47  EQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNRALATL 226
           E   YG  +     SGR+ EAL  I+ +K          + +L+    +   +  AL  L
Sbjct: 339 EHVVYGCVLKSFCISGRIREALGYIRELKNKEFMLLPEYFETLVKGLCRADRIADALEIL 398

Query: 227 EEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLCRT 406
           + MK++      V Y  +I GY+R   VS A D+F  +K++G  P   TY+  +  L   
Sbjct: 399 DIMKKRDFVDGNV-YGIIINGYLRKNDVSRALDLFHGMKESGYLPTTSTYTELMQHLFNM 457

Query: 407 GNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNRE 511
              +    L  EML  G+ P +V    I+ G  R+
Sbjct: 458 NEHQKGCELYDEMLERGVEPDSVAVTAIVAGHVRQ 492


>ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like isoform 1 [Fragaria vesca
            subsp. vesca]
          Length = 1038

 Score =  240 bits (612), Expect = 3e-61
 Identities = 109/176 (61%), Positives = 144/176 (81%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            A  ++++IG E++ L++YTYGSFVHGLLRSG++EEAL K++SMKQ G++PTVHVYTSLI+
Sbjct: 845  ASEMMDDIGEERSTLDRYTYGSFVHGLLRSGQVEEALAKMESMKQAGMKPTVHVYTSLIV 904

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HFLK++ + RAL    EM+++GC+PT+VTYS LI GY+     ++AW VF ++K  GPSP
Sbjct: 905  HFLKEKQIKRALEIFNEMQQEGCEPTVVTYSTLIRGYMNMEMTAEAWSVFHNMKLKGPSP 964

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMF+ CLC+ G SE+A  LITEML+ GI+PS VNFRT+ +GLNREGK DLA
Sbjct: 965  DFKTYSMFLHCLCKAGKSEEAMQLITEMLNSGIIPSVVNFRTVFYGLNREGKHDLA 1020



 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 44/164 (26%), Positives = 83/164 (50%)
 Frame = +2

Query: 32  EKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNR 211
           +++ ++   YG  ++G LR   +  AL+    MK++G  PT   YT L+ H     +  +
Sbjct: 403 KRDFVDGNVYGIIINGYLRKNDVSRALDLFHGMKESGYLPTTSTYTELMQHLFNMNEHQK 462

Query: 212 ALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFID 391
                +EM E+G +P  V  +A++ G+VR   +S+AW VF  +K  G  P  K+Y +FI 
Sbjct: 463 GCELYDEMLERGVEPDSVAVTAIVAGHVRQNHISEAWKVFIHMKDKGIKPTSKSYMVFIK 522

Query: 392 CLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
            LC+   +++   ++  M    +      F  ++  + ++G+ D
Sbjct: 523 ELCKISRTDEILKVLVHMQASDMRIQDEIFNWVILHMKKKGEMD 566



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 44/155 (28%), Positives = 69/155 (44%)
 Frame = +2

Query: 47  EQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNRALATL 226
           E   YG  +     SGR+ EAL  I+ +K          + +L+    +   +  AL  L
Sbjct: 339 EHVVYGCVLKSFCISGRIREALGYIRELKNKEFMLLPEYFETLVKGLCRADRIADALEIL 398

Query: 227 EEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLCRT 406
           + MK++      V Y  +I GY+R   VS A D+F  +K++G  P   TY+  +  L   
Sbjct: 399 DIMKKRDFVDGNV-YGIIINGYLRKNDVSRALDLFHGMKESGYLPTTSTYTELMQHLFNM 457

Query: 407 GNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNRE 511
              +    L  EML  G+ P +V    I+ G  R+
Sbjct: 458 NEHQKGCELYDEMLERGVEPDSVAVTAIVAGHVRQ 492


>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score =  238 bits (608), Expect = 1e-60
 Identities = 109/176 (61%), Positives = 138/176 (78%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            AL+L++E+G E++ L+QYTYG+ VHGLLR GR EEAL KI+SMK+ GI PTVHVYTSLI+
Sbjct: 879  ALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIV 938

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF K++ + +A+   E+M++ GC+PT+VTYSALI GY+   +  DAW V   LK  GP P
Sbjct: 939  HFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKP 998

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMFI CLC+ G SE+A  L++ ML DGIVPST+NFRT+ FGLN EGK DLA
Sbjct: 999  DFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIVPSTINFRTVFFGLNCEGKNDLA 1054



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 50/168 (29%), Positives = 90/168 (53%)
 Frame = +2

Query: 20  EIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDR 199
           EI  ++NL++   YG  ++G LR   L +A+E  + MK++GIQP    YT L+       
Sbjct: 409 EIMKKRNLIDAKIYGIIINGYLRKKDLSKAIELFQRMKESGIQPITSTYTELMQCLFNLN 468

Query: 200 DMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYS 379
             ++      EM E+G +   V   A++  +VR   +S+AW+VF ++K  G +P +K+YS
Sbjct: 469 QYDKGFELFNEMLERGIRVDSVATMAIVAAHVRQNHISEAWEVFNTMKDKGANPTWKSYS 528

Query: 380 MFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
           +FI  LCR   +++   ++ +M    I  +   F   +  + ++G+ D
Sbjct: 529 IFIKELCRVSRTDEILKVLYKMQASKIFINNDIFNLAIAFMEKKGEVD 576


>ref|XP_007204493.1| hypothetical protein PRUPE_ppa019635mg [Prunus persica]
            gi|462400024|gb|EMJ05692.1| hypothetical protein
            PRUPE_ppa019635mg [Prunus persica]
          Length = 893

 Score =  235 bits (599), Expect = 1e-59
 Identities = 109/176 (61%), Positives = 140/176 (79%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            A AL++++  +++ L+QYTYGS VHGLLRSG+LE AL K+ SMKQ GI PTVHVYTSLI+
Sbjct: 701  AAALMDDVREDRSKLDQYTYGSLVHGLLRSGQLEAALAKVDSMKQAGINPTVHVYTSLIV 760

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF K++ + +AL   +EM+++GC+PTIVTYSALI GY+     ++AW+VF  +KQ GP P
Sbjct: 761  HFFKEKQIGKALEIFKEMQQEGCEPTIVTYSALIRGYMNMEMFAEAWEVFHKMKQKGPLP 820

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DF+TYSMFI CLC+ G SE+A  LI EML+ GIVPS VNFRT+ +GLNREGK DLA
Sbjct: 821  DFRTYSMFISCLCKVGKSEEAIPLIPEMLNTGIVPSVVNFRTVFYGLNREGKQDLA 876



 Score =  104 bits (260), Expect = 2e-20
 Identities = 51/163 (31%), Positives = 87/163 (53%)
 Frame = +2

Query: 35  KNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNRA 214
           +N+L+   YG  ++G LR   + +AL+   SMK++G  P    YT L+ H  K  +  + 
Sbjct: 252 RNILDGKVYGIIINGYLRINEVSKALDLFHSMKESGYFPMTSTYTELMQHLFKLNEYQKG 311

Query: 215 LATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDC 394
               EEM E G +P  V  +A++ G+VR   +S+AW VF  +K+ G  P  K+YS+FI  
Sbjct: 312 CELYEEMLESGVEPDSVAITAVVAGHVRQNHISEAWKVFNKMKEKGIEPTVKSYSVFIKE 371

Query: 395 LCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
           LCR   +++   ++ +M    IV     F   +  + ++G+ +
Sbjct: 372 LCRISRTDEILKVLYDMQASSIVIRDDIFNLAIHHMEKKGETE 414



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 46/155 (29%), Positives = 75/155 (48%)
 Frame = +2

Query: 47  EQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNRALATL 226
           E   YGS +     SGR++EALE I+ +K   +      + +L+    +   +  AL  L
Sbjct: 187 EHIVYGSVLKCFCISGRIKEALEFIRELKNKEVILGPEYFETLVKGLCRADRIVDALEIL 246

Query: 227 EEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLCRT 406
           + MK +      V Y  +I GY+R  +VS A D+F S+K++G  P   TY+  +  L + 
Sbjct: 247 DIMKRRNILDGKV-YGIIINGYLRINEVSKALDLFHSMKESGYFPMTSTYTELMQHLFKL 305

Query: 407 GNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNRE 511
              +    L  EML  G+ P +V    ++ G  R+
Sbjct: 306 NEYQKGCELYEEMLESGVEPDSVAITAVVAGHVRQ 340


>ref|XP_002308333.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550336797|gb|EEE91856.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 1048

 Score =  234 bits (597), Expect = 2e-59
 Identities = 109/176 (61%), Positives = 140/176 (79%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            AL+LV+++  EK  L++YT+ S VHGLL+ GRLEEAL K+ SMKQ GI PTVHVYTSLI+
Sbjct: 856  ALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLIV 915

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF +++  ++AL   E MK++GC+PTIVTYSALI GY+ +  V +AW+VF SLK  GP+P
Sbjct: 916  HFFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAP 975

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMF+ CLCR G SE+A  L+++M+ +GIVPS VNFRT+ FGLNREGK  LA
Sbjct: 976  DFKTYSMFLSCLCRAGKSEEALQLLSDMVDNGIVPSNVNFRTVFFGLNREGKQSLA 1031



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 52/174 (29%), Positives = 94/174 (54%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V EI   K+ ++   YG  ++G LR   L +AL+  +SMK+ G  PT   YT L+ 
Sbjct: 398 ALEIV-EIMKRKDFVDGKVYGIIINGYLRRNELSKALDLFQSMKEFGHLPTTSTYTELMQ 456

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  +  +  +     +EM E+G +   V   A++ G+VR   +S+AW+VF +++  G  P
Sbjct: 457 HLFRSNEYQKCCELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIKP 516

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
            +K+YS+FI  LC+   +++   ++ +M    +      F  ++  + R+G+ D
Sbjct: 517 TWKSYSIFIKELCKVLRTDEIIKVLGKMQASKMFICDEIFEWVISCMERKGEMD 570



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/116 (21%), Positives = 59/116 (50%)
 Frame = +2

Query: 119 IKSMKQTGIQPTVHVYTSLIIHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVR 298
           ++ M++   +  +  +T LI  + K + + +AL   E+M++ GC+P +  Y   +     
Sbjct: 227 LEEMEKYSCERDIKTWTILIRQYGKAKLIGKALLVHEKMRKSGCEPDVEVYEVTLHSLCD 286

Query: 299 SGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVP 466
           +GK   A ++++ + Q    P+   Y M ++CL ++G+     ++  +M+    +P
Sbjct: 287 AGKGEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIP 342


>ref|XP_007028037.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
            [Theobroma cacao] gi|508716642|gb|EOY08539.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative [Theobroma cacao]
          Length = 1050

 Score =  234 bits (596), Expect = 2e-59
 Identities = 109/176 (61%), Positives = 136/176 (77%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            AL +++ +G E+  L+ Y YGS VHGLLR GR E+AL K+ SMKQ GI PTVHVYTSLI+
Sbjct: 859  ALEMLDNVGTEQATLDLYVYGSLVHGLLRKGRFEQALAKVDSMKQAGIYPTVHVYTSLIV 918

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF K+R M RAL    +MK++GCQPTIVTYSA+I GY+  GKV DAW+VF  ++   P P
Sbjct: 919  HFFKERQMERALGIFAKMKKEGCQPTIVTYSAMIRGYMNMGKVVDAWNVFHHMRLKEPKP 978

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMFI CLCR G SE+A  L++EM + GI+PSTVNF+T+ FGLNR+G+ DLA
Sbjct: 979  DFKTYSMFISCLCRIGRSEEAMQLLSEMPNSGILPSTVNFQTVFFGLNRQGRHDLA 1034



 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 53/174 (30%), Positives = 94/174 (54%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V +I   + L+ Q  Y   ++G LR   L +AL+  KSM+++G  PT   YT L+ 
Sbjct: 400 ALEIV-DIMKRRQLVSQKVYEIIINGYLRRKDLSKALDLFKSMQESGYLPTASAYTELMQ 458

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  +     +      EM ++G +P  V   A++ G+VR   +S+AW+VF+S++     P
Sbjct: 459 HLFRLNKYQKGCDLYNEMLQKGVEPDSVAIMAMVAGHVRQKHISEAWEVFKSMEDRSIRP 518

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
            +  YS+FI  LC+   +++ F ++++M    IV     F  ++  + R+G+ D
Sbjct: 519 TWTAYSIFIKELCKIARTDEIFRVLSKMQEAKIVIRDEIFHWVISCMERKGETD 572



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
 Frame = +2

Query: 50  QYTYGSFVHGLLRSGRLEE--ALEKI-KSMKQTGIQPTVHVYTSLIIHFLKDRDMNRALA 220
           ++T G+F   L  +G  +E   +E++ + MK+   +  +   T LI  + K + + +AL 
Sbjct: 203 RHTTGTFNTMLYIAGEAKEYGLVERLLEEMKEKSCEKDIKTCTILISQYGKSKLIGKALE 262

Query: 221 TLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLC 400
             E M+  GC+P    Y  +I     + K   A++ ++ + +   S D   Y M ++CL 
Sbjct: 263 VFENMRRCGCEPDAAAYRMMIRALCNAEKCDIAFEFYKEMVEKEMSLDLNLYKMLLNCLA 322

Query: 401 RTGNSEDAFTLITEMLHDGIVP 466
           ++GN+     +   M+    VP
Sbjct: 323 KSGNNAAVHLVADNMMRVSQVP 344


>ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Capsella rubella]
            gi|482555420|gb|EOA19612.1| hypothetical protein
            CARUB_v10002874mg [Capsella rubella]
          Length = 1016

 Score =  232 bits (591), Expect = 9e-59
 Identities = 102/176 (57%), Positives = 141/176 (80%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            AL+ ++    EK+LL+QYTYGS VHG L+ G+L+EAL K+ SMK+ GI+P+VHVYTSLI+
Sbjct: 823  ALSELDRFKGEKSLLDQYTYGSIVHGFLQRGQLQEALAKVNSMKEKGIKPSVHVYTSLIV 882

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF K++ + + + T +EM+E+GC+P++VT++A+ICGY+  GKV +AW  FR +++ G SP
Sbjct: 883  HFFKEKQLEKVIETCQEMEEEGCEPSVVTFTAMICGYMNLGKVEEAWKAFRYMEEKGTSP 942

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYS FI+CLC+ G SEDA  L++EML  GI PST+NFRT+ +GLNREGK DLA
Sbjct: 943  DFKTYSKFINCLCQAGKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKQDLA 998



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 48/174 (27%), Positives = 90/174 (51%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V +I   + L +   YG  + G LR   + +ALE+ + +K +G    V  YT ++ 
Sbjct: 377 ALEIV-DIMKRRKLDDSNVYGIIISGYLRQNNVSKALEQFEVIKNSGKTLRVSTYTEIMQ 435

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  K +   +      EM E G +P  V  +A++ GY+   +V++AW+VF S+++ G  P
Sbjct: 436 HLFKLKQFEKGCNLFSEMIENGIEPDSVAITAMVAGYLGQNRVAEAWNVFGSMEEKGIKP 495

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
            +K+YS+F   LCR+   ++   L+ +M    +      F  ++  + + G+ +
Sbjct: 496 TWKSYSIFAKELCRSAKYDEVLKLLNQMHTSKMAIRNDMFSWVISSMEKNGEKE 549



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 42/157 (26%), Positives = 73/157 (46%)
 Frame = +2

Query: 29  CEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMN 208
           CE  + E   +G  +     SG+++EALE I+ +K   +      +  L+    +   M 
Sbjct: 318 CE--ISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEVCLDAKHFEILVKGLCRANRMV 375

Query: 209 RALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFI 388
            AL  ++ MK +    + V Y  +I GY+R   VS A + F  +K +G +    TY+  +
Sbjct: 376 DALEIVDIMKRRKLDDSNV-YGIIISGYLRQNNVSKALEQFEVIKNSGKTLRVSTYTEIM 434

Query: 389 DCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFG 499
             L +    E    L +EM+ +GI P +V    ++ G
Sbjct: 435 QHLFKLKQFEKGCNLFSEMIENGIEPDSVAITAMVAG 471


>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score =  231 bits (590), Expect = 1e-58
 Identities = 109/176 (61%), Positives = 136/176 (77%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALAL  E+G EK +++Q T+GS VHGLLR GRLEEAL K+  MKQ GI PT+HV+TSLI+
Sbjct: 841  ALALHEEVGEEKFIIDQLTFGSIVHGLLRKGRLEEALAKVDVMKQNGITPTIHVFTSLIV 900

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF K++ + +A+ T EEM   G +PTIVTYSALI GY+  G+  DAWD+F  +K  GP P
Sbjct: 901  HFFKEKQVEKAIETFEEMLHSGYEPTIVTYSALIRGYMNVGRPIDAWDIFYRMKLKGPFP 960

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMF+ CLC+ G SE+   LI+EML  GIVPST+NFRT+++GLNREGK DLA
Sbjct: 961  DFKTYSMFLTCLCKVGKSEEGMRLISEMLDSGIVPSTINFRTVVYGLNREGKHDLA 1016



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 44/148 (29%), Positives = 86/148 (58%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V +I   +++++   +G  ++G L    ++ ALE  + MK++G  PT+  YT L++
Sbjct: 384 ALEIV-DIMKRRDMVDGRVHGIIINGYLGRNDVDRALEVFQCMKESGCVPTISTYTELML 442

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  +      A    +EM  +G +P +V  +A++ G+V    +SDAW +F+S++  G  P
Sbjct: 443 HLFRLDRYEEACMLYDEMLGKGIKPDVVAITAMVAGHVSQNHISDAWKMFKSMECQGIKP 502

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEM 445
            +K++++FI  LC+   ++D   ++ EM
Sbjct: 503 TWKSFAVFIKELCKASQTDDIVKVLHEM 530



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 38/137 (27%), Positives = 69/137 (50%)
 Frame = +2

Query: 56  TYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNRALATLEEM 235
           TY + +H    +       + ++ M + GIQ  V+ +T +I H+ K R ++ AL   E M
Sbjct: 192 TYNTMLHIAREAKEFGLVKKLVEEMDECGIQKDVNTWTIIINHYGKARKISEALLAFENM 251

Query: 236 KEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLCRTGNS 415
           K  GC+P  V+Y A+IC    +GK   A + +  + +     D + Y M ++C+ R+G+ 
Sbjct: 252 KRCGCEPDAVSYGAIICSLCSAGKRDIAMEFYNEMVRKDMVLDVRLYKMVMNCMARSGDI 311

Query: 416 EDAFTLITEMLHDGIVP 466
                L  +M+   ++P
Sbjct: 312 AAVSLLGNDMIRLSVMP 328



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
 Frame = +2

Query: 47   EQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFL--KDRDMNRALA 220
            E +T    V+G  R+G  E A+   K MK     P+   Y  LII     K R ++ AL 
Sbjct: 717  ETWTIMIMVYG--RTGLTEMAMNCFKEMKADDYVPSRSTYKYLIIALCGRKGRKVDDALK 774

Query: 221  TLEEMKEQGCQP---TIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFID 391
               EM   G  P    I TY   +C     G+V DA     SL+  G +    +YS+FI 
Sbjct: 775  IYGEMISAGYVPDKELIETYLGCLC---EVGRVLDARRCTDSLQNFGYTVPL-SYSLFIR 830

Query: 392  CLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGK 517
             LCR G  E+A  L  E+  +  +   + F +I+ GL R+G+
Sbjct: 831  ALCRAGKVEEALALHEEVGEEKFIIDQLTFGSIVHGLLRKGR 872


>ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutrema salsugineum]
            gi|557100203|gb|ESQ40566.1| hypothetical protein
            EUTSA_v10012543mg [Eutrema salsugineum]
          Length = 1036

 Score =  230 bits (587), Expect = 3e-58
 Identities = 101/166 (60%), Positives = 135/166 (81%)
 Frame = +2

Query: 32   EKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNR 211
            E++LLEQYTYGS VHGLL  G L++AL+K+ SMK+ GI+P VHVYTSLI+HF K++ + +
Sbjct: 853  ERSLLEQYTYGSIVHGLLEKGHLQKALDKVNSMKEMGIKPGVHVYTSLIVHFFKEKQIEK 912

Query: 212  ALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFID 391
             L T ++M+E+ C+P++VTY+A+ICGY+  GK  +AW VFR++K+ G SPDF+TYS FI+
Sbjct: 913  VLETCQKMEEESCEPSVVTYTAMICGYMSLGKAEEAWKVFRNMKEKGTSPDFRTYSKFIN 972

Query: 392  CLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            CLC+ G SEDA  L++EML  GI PSTVNFRT+ +GLNREGK DLA
Sbjct: 973  CLCQAGKSEDALNLLSEMLDKGIAPSTVNFRTVFYGLNREGKQDLA 1018



 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 50/174 (28%), Positives = 95/174 (54%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V +I  ++ L +   YG  + G LR   + +ALE+++ +K++GI P V  YT ++ 
Sbjct: 388 ALEIV-DIMKKRKLDDSNVYGIIISGYLRQNDVSKALEQLEVLKKSGIIPRVSTYTEIMQ 446

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  K +   +      EM E G +P  V  +A++ G++   +V++AW VF S+++ G  P
Sbjct: 447 HLFKMKQFQKGCNLFREMIENGIEPDNVAITAVVAGHLGQNQVAEAWKVFSSMEEKGIKP 506

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
            +K+YS+F+  LCR+   ++   L+ +M    I      F  ++  + + G+ +
Sbjct: 507 TWKSYSIFVKELCRSAKYDEIVKLLNQMHASKITIRDNMFSWVISCMEKNGEKE 560


>ref|XP_007145770.1| hypothetical protein PHAVU_007G266200g [Phaseolus vulgaris]
            gi|561018960|gb|ESW17764.1| hypothetical protein
            PHAVU_007G266200g [Phaseolus vulgaris]
          Length = 1069

 Score =  229 bits (583), Expect = 8e-58
 Identities = 106/176 (60%), Positives = 137/176 (77%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALAL+ E+G EK++++Q T GS VHGLLR GRL+EAL K+++MKQ GI PT+HVYTSLI+
Sbjct: 876  ALALITEVGEEKSIIDQLTCGSIVHGLLRKGRLQEALAKVEAMKQKGIAPTIHVYTSLIV 935

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF K++ + +A+ T EEM++ G +P IVTYS LI GY+  G+  DAW++F  +K  GP P
Sbjct: 936  HFFKEKQVEKAIETFEEMQQSGYEPNIVTYSVLIRGYMNVGRPIDAWNIFYRMKLKGPFP 995

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMF+ CLC+ G SE+A  LI EML  GIVPST+NFRT+ +GLNREGK  LA
Sbjct: 996  DFKTYSMFLTCLCKVGRSEEAMQLIFEMLDSGIVPSTINFRTVFYGLNREGKNALA 1051



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 50/172 (29%), Positives = 91/172 (52%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V EI   ++ ++   +G  ++G L     + AL+  +SMK++G  PT+  YT LI 
Sbjct: 419 ALEIV-EIMKRRDTVDGRIHGIIINGYLGRNDFDRALKVFQSMKESGCVPTISTYTELIQ 477

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  +      A    +EM  +G +P IV  +A++ G+V   ++S+AW +F  ++     P
Sbjct: 478 HLFRLSRYEEACMMYDEMLGKGIKPDIVAITAMVAGHVSQNRISEAWKMFNCMECQDIKP 537

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGK 517
            +K+Y++FI  LC+   +ED   ++ EM    I      FR ++  +  +G+
Sbjct: 538 TWKSYAVFIKELCKASRTEDIVKVLHEMQASNIKIQDTLFRWVITYMEEKGE 589



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
 Frame = +2

Query: 47   EQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFL--KDRDMNRALA 220
            E +T    ++G  R+G  E A+   K MK  G  P+   Y  LII F   K R ++ AL 
Sbjct: 752  ETWTIMIMLYG--RTGLTEMAMNCFKEMKANGYSPSRSTYKYLIIAFCGRKGRKVDDALE 809

Query: 221  TLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLC 400
            T  EM   G  P      A +      G+V +A     SL+  G +    +YS+FI  LC
Sbjct: 810  TYREMIGAGYAPDKELIEAYLSCLCEVGRVLEARRCADSLQNFGYTAPL-SYSLFIRTLC 868

Query: 401  RTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGK 517
            R G  E+A  LITE+  +  +   +   +I+ GL R+G+
Sbjct: 869  RAGRVEEALALITEVGEEKSIIDQLTCGSIVHGLLRKGR 907



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 32/116 (27%), Positives = 58/116 (50%)
 Frame = +2

Query: 119 IKSMKQTGIQPTVHVYTSLIIHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVR 298
           ++ M + GIQ  V  +T L+ H+ K R ++ AL   E MK  G +P  V+YSA+I     
Sbjct: 248 VEEMDECGIQKDVKTWTILVTHYGKARKISEALLAFENMKRCGYEPDAVSYSAIIRSLCS 307

Query: 299 SGKVSDAWDVFRSLKQNGPSPDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVP 466
           + K   A + +  + +     D + Y   ++C+ R+G+      L  +M+   ++P
Sbjct: 308 ADKGDIAMEFYSDMVRKDMVCDVRLYKTIMNCMARSGDVAAVSLLGNDMIRLSVMP 363


>ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Citrus sinensis]
          Length = 1040

 Score =  228 bits (580), Expect = 2e-57
 Identities = 101/176 (57%), Positives = 140/176 (79%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALAL++E+  E++ L+++ +GS +HGL++ G++EEAL K+++MKQ GI PTVHVYTS ++
Sbjct: 847  ALALLDEVKEERSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVV 906

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF +++ + RAL   E M+++GC+PT+VTY+ALI G+V  GKV++AWDVF  +K  GP P
Sbjct: 907  HFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFVNLGKVAEAWDVFYRMKIKGPFP 966

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DF+TYSMFI CLC+ G SE+A  L++EM   GIVPS +NFRTI FGLNREGK DLA
Sbjct: 967  DFRTYSMFIGCLCKVGKSEEALQLLSEMTESGIVPSNINFRTIFFGLNREGKRDLA 1022



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 53/172 (30%), Positives = 90/172 (52%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V +I   +NL++   YG  + G LR   L +AL + + MK++G  P    YT L+ 
Sbjct: 389 ALEIV-DIMMRRNLVDGKIYGIIISGYLRKNDLSKALVQFERMKESGYLPMASTYTELMQ 447

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  K  +  +      EM ++G QP  V  +A++ G+VR   +S+AW VF+ ++  G  P
Sbjct: 448 HLFKLNEYKKGCELYNEMLKRGIQPDSVAVTAMVAGHVRQDNLSEAWKVFKCMEDKGIRP 507

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGK 517
             K+YS+FI  LCR   + +   ++  M    IV     F  ++  + ++G+
Sbjct: 508 TGKSYSVFIKELCRVSRTNEILKVLNNMQASKIVIGDEIFHWVISCMEKKGE 559


>ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Cicer arietinum]
          Length = 1045

 Score =  227 bits (579), Expect = 2e-57
 Identities = 105/176 (59%), Positives = 138/176 (78%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALAL++ +G EK+++E+ TYGS VHGLL  G+LEEAL K+  MKQ GI PT+HVYTSLI+
Sbjct: 852  ALALIDGVGPEKSIVEKLTYGSIVHGLLHKGKLEEALAKVHGMKQEGITPTIHVYTSLIV 911

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF K++ + +A+ T +EM++ G +P +VTYSALI GY+  G+ +DAW+VF  +K  GP P
Sbjct: 912  HFFKEKKIEKAIETYDEMQKSGYEPNVVTYSALIRGYMNMGRPNDAWNVFYRMKFKGPFP 971

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DFKTYSMF+ CLC+ G SE+A  LI+EML  GIVPST+NFRT+ +GLNREGK  LA
Sbjct: 972  DFKTYSMFLCCLCKDGRSEEAMRLISEMLESGIVPSTINFRTVFYGLNREGKYGLA 1027



 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 51/172 (29%), Positives = 94/172 (54%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V EI   +++++   YG  + G L    +  A++  +SMK++G  P ++ YT LI 
Sbjct: 394 ALEIV-EIMKRRDIVDGNIYGIIISGYLSRNDVRTAIDLFQSMKESGYVPMIYTYTELIQ 452

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  +      A    +EM  +G +P IV  +A++ G+V   ++S+AW +F+S++  G  P
Sbjct: 453 HLFRLSRYEEACMLYDEMLGKGIKPDIVAITAMVAGHVSHNRISEAWKIFKSMELQGIKP 512

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGK 517
            +K+YS+FI  LC+   ++D   ++ EM    IV     F  ++  +  +G+
Sbjct: 513 TWKSYSVFIKELCKASRTDDIVKVLYEMQGSKIVIKDEVFDWVITYMENKGE 564



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 32/117 (27%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +2

Query: 119 IKSMKQTGIQPTVHVYTSLIIHFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVR 298
           ++ M + G+Q  V+ +T LI H+ K + ++ AL   E M++ GC+P  V++  +I     
Sbjct: 222 VEEMDECGVQKDVNTWTILISHYGKAKKISEALLAFENMQKCGCEPDAVSFRTVIRLLCI 281

Query: 299 SGKVSDAWDVFRSL-KQNGPSPDFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVP 466
           SGK   A + ++ + +++    D + Y M ++CL ++G+ E    L  +M    ++P
Sbjct: 282 SGKGDIAMEFYKDMVRKDIALDDVRLYKMLMNCLAKSGDVEAVSLLGNDMTRLCLMP 338



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
 Frame = +2

Query: 47   EQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFL--KDRDMNRALA 220
            E +T    ++G  R+G  E A+     MK  G  P+   Y  LII     K R ++ AL 
Sbjct: 728  ETWTIMIMLYG--RTGLTEMAMNCFNEMKAGGNSPSRSTYKYLIIALCGRKGRKVDDALK 785

Query: 221  TLEEMKEQGCQP---TIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFID 391
            T  EM   G  P    I TY   +C     G++ +A     SL++ G +    +YS+FI 
Sbjct: 786  TYSEMISSGHVPDKELIETYLGCLC---EVGRILEARKCIDSLQRFGYAVPL-SYSLFIR 841

Query: 392  CLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGK 517
             LCR G  E+A  LI  +  +  +   + + +I+ GL  +GK
Sbjct: 842  ALCRAGKVEEALALIDGVGPEKSIVEKLTYGSIVHGLLHKGK 883


>ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citrus clementina]
            gi|557532087|gb|ESR43270.1| hypothetical protein
            CICLE_v10010964mg [Citrus clementina]
          Length = 1040

 Score =  226 bits (576), Expect = 5e-57
 Identities = 100/176 (56%), Positives = 139/176 (78%)
 Frame = +2

Query: 2    ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
            ALAL++E+  E++ L+++ +GS +HGL++ G++EEAL K+++MKQ GI PTVHVYTS ++
Sbjct: 847  ALALLDEVKEERSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVV 906

Query: 182  HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
            HF +++ + RAL   E M+++GC+PT+VTY+ALI G+   GKV++AWDVF  +K  GP P
Sbjct: 907  HFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFP 966

Query: 362  DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            DF+TYSMFI CLC+ G SE+A  L++EM   GIVPS +NFRTI FGLNREGK DLA
Sbjct: 967  DFRTYSMFIGCLCKVGKSEEALELLSEMTESGIVPSNINFRTIFFGLNREGKRDLA 1022



 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 54/172 (31%), Positives = 90/172 (52%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V +I   +NL++   YG  + G LR   L +AL + + MK++G  P    YT L+ 
Sbjct: 389 ALEIV-DIMMRRNLVDGKIYGIIIGGYLRKNDLSKALVQFERMKESGYLPMASTYTELMQ 447

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
           H  K  D  +      EM ++G QP  V  +A++ G+VR   +S+AW VF+ ++  G  P
Sbjct: 448 HLFKLNDYKKGCELYNEMLKRGIQPDSVAVTAMVAGHVRQDNLSEAWKVFKCMEDKGIRP 507

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGK 517
             K+YS+FI  LCR   + +   ++  M    IV     F  ++  + ++G+
Sbjct: 508 TRKSYSVFIKELCRVSRTNEILKVLNNMQASKIVIGDEIFHWVISCMEKKGE 559


>ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317055|gb|EFH47477.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1029

 Score =  226 bits (575), Expect = 7e-57
 Identities = 99/166 (59%), Positives = 133/166 (80%)
 Frame = +2

Query: 32   EKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMNR 211
            +++LL+QYTYGS VHGLL+ G L +AL+K+ SMK+ GI+P VHVYTSLI+HF K++   +
Sbjct: 846  DRSLLDQYTYGSIVHGLLQRGDLHKALDKVNSMKEIGIKPGVHVYTSLIVHFFKEKQFEK 905

Query: 212  ALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFID 391
             L T  +MKE+ C+P++VTY+A+ICGY+  GKV +AW  FR++++ G SPDFKTYS FI+
Sbjct: 906  VLETCHKMKEESCEPSVVTYTAMICGYMSLGKVEEAWKAFRNIEEKGTSPDFKTYSKFIN 965

Query: 392  CLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPDLA 529
            CLC+ G SEDA  L++EML  GI PST+NFRT+ +GLNREGK DLA
Sbjct: 966  CLCQAGKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKQDLA 1011



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 49/174 (28%), Positives = 91/174 (52%)
 Frame = +2

Query: 2   ALALVNEIGCEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLII 181
           AL +V +I   + L +   YG  + G LR   + +ALE+ + +K++G  P V  YT ++ 
Sbjct: 382 ALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEIIKKSGRPPRVSTYTEIMQ 440

Query: 182 HFLKDRDMNRALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSP 361
              K +   +      EM E G +P  V  +A++ G++   +V++AW VF S+++ G  P
Sbjct: 441 QLFKLKQFEKGCNLFSEMIESGIEPDSVAITAVVAGHLGQNRVAEAWKVFGSMEEKGIKP 500

Query: 362 DFKTYSMFIDCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFGLNREGKPD 523
            +K+YS+F+  LCR+   ++  TL  +M    I      F  ++  + + G+ +
Sbjct: 501 TWKSYSIFMKELCRSSRYDEIITLFNQMHASKIAIRDDIFSWVISSMEKNGEKE 554



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 43/157 (27%), Positives = 73/157 (46%)
 Frame = +2

Query: 29  CEKNLLEQYTYGSFVHGLLRSGRLEEALEKIKSMKQTGIQPTVHVYTSLIIHFLKDRDMN 208
           CE  + E   +G  +     SG+++EALE I+ +K   +      +  L+    +   M 
Sbjct: 323 CE--ISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMV 380

Query: 209 RALATLEEMKEQGCQPTIVTYSALICGYVRSGKVSDAWDVFRSLKQNGPSPDFKTYSMFI 388
            AL  ++ MK +    + V Y  +I GY+R   VS A + F  +K++G  P   TY+  +
Sbjct: 381 DALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEIIKKSGRPPRVSTYTEIM 439

Query: 389 DCLCRTGNSEDAFTLITEMLHDGIVPSTVNFRTIMFG 499
             L +    E    L +EM+  GI P +V    ++ G
Sbjct: 440 QQLFKLKQFEKGCNLFSEMIESGIEPDSVAITAVVAG 476