BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00036258
         (553 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]    67   5e-14
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]    64   1e-13
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    66   1e-13
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    69   2e-13
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    58   3e-13
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]    64   3e-13
gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subc...    54   7e-13
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]         56   1e-12
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]            56   1e-12
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]    60   9e-12
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...    58   2e-11
emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]    59   3e-11
ref|XP_004972030.1| PREDICTED: uncharacterized protein LOC101756...    58   4e-11
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]    57   4e-11
gb|ABF94964.1| retrotransposon protein, putative, Ty1-copia subc...    57   5e-11
gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc...    62   5e-11
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]    59   6e-11
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]    60   6e-11
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...    57   7e-11
emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]    60   8e-11

>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score = 67.0 bits (162), Expect(2) = 5e-14
 Identities = 53/169 (31%), Positives = 74/169 (43%), Gaps = 16/169 (9%)
 Frame = -1

Query: 460 ALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTA--LFEHSAQLAYRGRGAGYPAQFDR 287
           A+V     R+D   ++ +     A+E RL QQ +   L   SA  A      G   +++ 
Sbjct: 190 AVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIEQLPAMSANYASSSNNRGGGRKYNG 249

Query: 286 GSAPGSASSTGNF---GRGSR--------PNANRNMVCQLCGRTGHVALKCFKRFDVHF- 143
           G  P    +  NF   GRG R         +++    CQLCG+ GH    C+ RFD+ F 
Sbjct: 250 GRGPNFMMTNSNFRGRGRGGRYGQSGRQNSSSSERPQCQLCGKFGHTVQVCYHRFDITFQ 309

Query: 142 -TGNETTNGSNAA-SNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
            T N TT  SN+  SN  P    S  +  DD          +WY+DSGA
Sbjct: 310 STQNNTTGVSNSGNSNSMPAMVASSNNLADD----------NWYLDSGA 348



 Score = 36.2 bits (82), Expect(2) = 5e-14
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y MK++G AD  AAIG+P+ + + IM+L+  L
Sbjct: 153 YIMKVKGAADSLAAIGEPVSEQDQIMNLLGGL 184


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score = 64.3 bits (155), Expect(2) = 1e-13
 Identities = 37/105 (35%), Positives = 53/105 (50%)
 Frame = -1

Query: 457 LVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRGRGAGYPAQFDRGSA 278
           +VVN   R +A  +QE+    Q++E+RL Q   A        A+   G    +  + G  
Sbjct: 88  IVVNITSRSEAISLQEVHYLLQSHEIRLEQLSAASVIDVPPAAHITIGGVQNSNTNDGQF 147

Query: 277 PGSASSTGNFGRGSRPNANRNMVCQLCGRTGHVALKCFKRFDVHF 143
             S+S          P  +R +VCQLCG+ GH A+KCF RFDV+F
Sbjct: 148 KSSSSKNFRPRNVCNPQTSR-IVCQLCGKMGHTAMKCFHRFDVYF 191



 Score = 37.7 bits (86), Expect(2) = 1e-13
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y +KMR IAD  +A GKP+ D++LI++++  L
Sbjct: 50  YVLKMRNIADMLSASGKPVPDEDLILYILGGL 81


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 65.9 bits (159), Expect(2) = 1e-13
 Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
 Frame = -1

Query: 460 ALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRGRGAGYPAQFDRGS 281
           A+V     R D   ++ I     A+E RL QQ +++ + SA  A      G   +F+ G 
Sbjct: 193 AVVTAINIRDDKISLEAIHSMLLAFEHRLEQQ-SSIEQMSANYASSSNNRGGGRKFNGGR 251

Query: 280 APGSASSTGNF-----------GRGSRPNAN--RNMVCQLCGRTGHVALKCFKRFDVHFT 140
             G + +  N+           G+G R N++      CQLCG+ GH A  C+ RFD+ F 
Sbjct: 252 GQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQ 311

Query: 139 GNETTNGSNAASNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
           G +TT  S++ +NG+     +  ++  +          SWY+DSGA
Sbjct: 312 GGQTTI-SHSLNNGNQNNIPAMVASASN-----NPADESWYLDSGA 351



 Score = 35.8 bits (81), Expect(2) = 1e-13
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y MK++G AD  AAIG+P+ + + +M+L+  L
Sbjct: 156 YIMKIKGAADNLAAIGEPVSEQDQVMNLLGGL 187


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 68.6 bits (166), Expect(2) = 2e-13
 Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
 Frame = -1

Query: 436 RKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRGRGAGYPAQFDRGSAPGSASST 257
           R D   ++ I     A+E RL QQ +++ + SA  A      G   +F+ G   G A + 
Sbjct: 51  RDDKISLEAIHSMLLAFEHRLEQQ-SSIEQMSANYASSSNNRGGGRKFNGGCGQGYAPNN 109

Query: 256 GNF-----------GRGSRPNAN--RNMVCQLCGRTGHVALKCFKRFDVHFTGNETTNGS 116
            N+           G+G R N++      CQLCG+ GH A  C+ RFD+ F G  TT  S
Sbjct: 110 NNYTYXSHGXGGRNGQGRRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGXTTT-S 168

Query: 115 NAASNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
            + +NG+    L+  ++  ++         SWY+DSGA
Sbjct: 169 PSLNNGNQNNILAMVASFSNSSADE-----SWYLDSGA 201



 Score = 32.7 bits (73), Expect(2) = 2e-13
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y MK++G  D  AAIG+P+ + + +M+L+  L
Sbjct: 6   YIMKIKGATDNLAAIGEPVLEQDWVMNLLGGL 37


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 58.2 bits (139), Expect(2) = 3e-13
 Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 15/148 (10%)
 Frame = -1

Query: 457 LVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQ--HTALFEHSAQLAYRGRGAGYPAQ---- 296
           LV   + R D     ++     +YE R+  Q   ++L + SA     GRG  +       
Sbjct: 184 LVTAVVARSDPITPGDLYTQLLSYENRMHLQTGSSSLMQSSANARSPGRGMSWGRSGGRG 243

Query: 295 FDRGSAPGSASSTG---NFGRGSR------PNANRNMVCQLCGRTGHVALKCFKRFDVHF 143
           F RG   G   S G   +FGRG+        + +    CQ+C R GH AL C+ RFD ++
Sbjct: 244 FSRGRGRGRGPSRGGFQSFGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWYRFDENY 303

Query: 142 TGNETTNGSNAASNGSPKAFLSDFSAGD 59
             ++ +  S A  NGS   + +D  A D
Sbjct: 304 VPDQRSANSAAHQNGSNVPWYTDTGATD 331



 Score = 42.4 bits (98), Expect(2) = 3e-13
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           YF KMRG AD+  A GKPLDD+E +  L+  L
Sbjct: 146 YFAKMRGFADELGAAGKPLDDEEFVSFLLTGL 177


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score = 64.3 bits (155), Expect(2) = 3e-13
 Identities = 52/169 (30%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
 Frame = -1

Query: 460 ALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTA--LFEHSAQLAYRGRGAGYPAQFDR 287
           A+V     R+D   ++ +     A+E RL QQ +   L   SA  A      G   +++ 
Sbjct: 190 AVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIEQLPAMSANYASXSNNRGGGRKYNG 249

Query: 286 GSAPGSASSTGNF---GRGSR--------PNANRNMVCQLCGRTGHVALKCFKRFDVHF- 143
           G  P    +  NF   GRG R         +++    CQLCG+ GH    C+ RFD+ F 
Sbjct: 250 GRGPNFMMTNSNFRGRGRGXRYGQSGRQNSSSSERPQCQLCGKFGHTVQVCYHRFDITFQ 309

Query: 142 -TGNETTNGSNAA-SNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
            T N TT  SN+  SN  P       +  DD          +WY+DSGA
Sbjct: 310 STQNNTTGVSNSGNSNXMPAMVAXSNNXADD----------NWYLDSGA 348



 Score = 36.2 bits (82), Expect(2) = 3e-13
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y MK++G AD  AAIG+P+ + + IM+L+  L
Sbjct: 153 YIMKVKGAADSLAAIGEPVSEQDQIMNLLGGL 184


>gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 339

 Score = 53.5 bits (127), Expect(2) = 7e-13
 Identities = 41/116 (35%), Positives = 52/116 (44%)
 Frame = -1

Query: 349 EHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNFGRGSRPNANRNMVCQLCGRTGHVALK 170
           + SA  A+RGRG        RG+        GN GRG      R  VCQLCG+TGH  +K
Sbjct: 206 QSSANAAFRGRGNNNNNFRGRGNG---GCGRGNGGRGGGQQGPRP-VCQLCGKTGHTVIK 261

Query: 169 CFKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
           C+ RFD  +   E    + AA+N          + G D          +WYVD GA
Sbjct: 262 CWYRFDQTYQPEEKV--AAAATNS---------AYGVDT---------NWYVDCGA 297



 Score = 45.8 bits (107), Expect(2) = 7e-13
 Identities = 18/32 (56%), Positives = 26/32 (81%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           YF KM+G+AD  A+ GKP+DDDEL+ +++A L
Sbjct: 146 YFSKMKGLADDLASAGKPIDDDELVSYILAGL 177


>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
          Length = 1131

 Score = 56.2 bits (134), Expect(2) = 1e-12
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
 Frame = -1

Query: 454 VVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRG-RGAGYPAQFDRGSA 278
           +V ++  KD   + ++     ++E  L  Q    +  SA  A RG RG G      RG  
Sbjct: 175 LVASVSSKDYISLSDLYAQLLSFEAHLNNQSEGGYHSSANSASRGGRGRGQGRGRGRGGF 234

Query: 277 PGS-ASSTGNFGRGSRPNANRNMV-CQLCGRTGHVALKCFKRFDVHFTGNE 131
             +  S  G  GRG R   + +   CQLCG+ GH    C+KRFD  F+GN+
Sbjct: 235 GSNFGSGFGGRGRGGRGRGDGSRPSCQLCGKEGHTVHTCWKRFDRSFSGND 285



 Score = 42.0 bits (97), Expect(2) = 1e-12
 Identities = 16/32 (50%), Positives = 25/32 (78%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           YF KM+G+AD+ AA GK LDDD+++ +++  L
Sbjct: 137 YFTKMKGLADEMAAAGKKLDDDDIVSYILGGL 168


>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
          Length = 1087

 Score = 56.2 bits (134), Expect(2) = 1e-12
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
 Frame = -1

Query: 454 VVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRG-RGAGYPAQFDRGSA 278
           +V ++  KD   + ++     ++E  L  Q    +  SA  A RG RG G      RG  
Sbjct: 175 LVASVSSKDYISLSDLYAQLLSFEAHLNNQSEGGYHSSANSASRGGRGRGQGRGRGRGGF 234

Query: 277 PGS-ASSTGNFGRGSRPNANRNMV-CQLCGRTGHVALKCFKRFDVHFTGNE 131
             +  S  G  GRG R   + +   CQLCG+ GH    C+KRFD  F+GN+
Sbjct: 235 GSNFGSGFGGRGRGGRGRGDGSRPSCQLCGKEGHTVHTCWKRFDRSFSGND 285



 Score = 42.0 bits (97), Expect(2) = 1e-12
 Identities = 16/32 (50%), Positives = 25/32 (78%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           YF KM+G+AD+ AA GK LDDD+++ +++  L
Sbjct: 137 YFTKMKGLADEMAAAGKKLDDDDIVSYILGGL 168


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score = 59.7 bits (143), Expect(2) = 9e-12
 Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
 Frame = -1

Query: 460  ALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL------FEHSAQLAYRGRGAGYPA 299
            A+V     R D   I+ +     A+E RL QQ +          +++    RG G  Y  
Sbjct: 1035 AVVTAINIRDDKISIEAVHSMLLAFEHRLEQQSSIKQFSPISANYASSSNNRGGGRRYNG 1094

Query: 298  QFDRGSAPGSASST-------GNFGRGSRPNANRNMV--CQLCGRTGHVALKCFKRFDVH 146
               +   P  ++ T       G +G+  R N+N +    CQLCG+ GH    C+ RFD+ 
Sbjct: 1095 GRGQNHTPNISNYTYRGCGRGGRYGQNGRHNSNSSEKPQCQLCGKFGHTVQICYHRFDIS 1154

Query: 145  FTGNETTN--GSNAAS-NGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
            +  ++++N   SNA + N  P    S  +  DD          +WY+DSGA
Sbjct: 1155 YQSSQSSNTSPSNAGNPNSIPAMVASSNNLADD----------TWYLDSGA 1195



 Score = 35.8 bits (81), Expect(2) = 9e-12
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = -2

Query: 552  YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
            Y MK++G AD  AAIG+P+ + + +M+L+  L
Sbjct: 998  YIMKVKGAADSLAAIGEPVSEQDQVMNLLGGL 1029


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
           gi|31430072|gb|AAP52036.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1058

 Score = 57.8 bits (138), Expect(2) = 2e-11
 Identities = 45/153 (29%), Positives = 63/153 (41%)
 Frame = -1

Query: 460 ALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRGRGAGYPAQFDRGS 281
           ++V     R D   + E+      +E RL     AL   +  ++  G G G+        
Sbjct: 146 SVVTTVTGRTDPISVNELYGLLVGFESRLELLQNALQASANAMSRGGCGGGH-------G 198

Query: 280 APGSASSTGNFGRGSRPNANRNMVCQLCGRTGHVALKCFKRFDVHFTGNETTNGSNAASN 101
             G+ +  G  GRG R +      CQLCG+ GH   KC+KRFD  FT  E +  + A S+
Sbjct: 199 QGGNNNRGGGSGRG-RGDGKPKPTCQLCGKVGHTVAKCWKRFDPSFTREEKSANTAATSS 257

Query: 100 GSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
                     S G D          +WYVDS A
Sbjct: 258 ----------SYGIDT---------NWYVDSNA 271



 Score = 37.0 bits (84), Expect(2) = 2e-11
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y  KM+ +AD+ A+ GK LDD+EL+ +++A L
Sbjct: 109 YVGKMKALADEMASAGKALDDEELVSYILAGL 140


>emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]
          Length = 1083

 Score = 58.5 bits (140), Expect(2) = 3e-11
 Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
 Frame = -1

Query: 436 RKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAY------RGRGAGYPAQFDRGSAP 275
           R D   I+ +     A+E RL QQ +          Y      RG G  Y     +   P
Sbjct: 94  RDDKISIEAVHSMLLAFEHRLEQQSSIEQFSPISANYXSSSNSRGGGRXYNGGRXQNHTP 153

Query: 274 GSASST-------GNFGRGSRPNANRNMV--CQLCGRTGHVALKCFKRFDVHFTGNE--T 128
             ++ T       G +G+  R N+N +    CQLCG+ GH+   C+ RFD+ +  ++   
Sbjct: 154 NISNYTYRGXGRXGRYGQNRRHNSNSSEKPQCQLCGKFGHIVQICYXRFDISYQSSQXSN 213

Query: 127 TNGSNAAS-NGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
           T+ SNA + N  P    S  +  DD          +WY+DSGA
Sbjct: 214 TSPSNAGNPNXIPAMVASSNNLADD----------TWYLDSGA 246



 Score = 35.4 bits (80), Expect(2) = 3e-11
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y MK++G AD  AAIG+P+ + + +M+L+  L
Sbjct: 49  YIMKVKGAADSLAAIGEPVSEQDQVMNLLXGL 80


>ref|XP_004972030.1| PREDICTED: uncharacterized protein LOC101756661 [Setaria italica]
          Length = 331

 Score = 58.2 bits (139), Expect(2) = 4e-11
 Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 5/165 (3%)
 Frame = -1

Query: 481 NYASHG*ALVVNTMHRKDAPDIQEIQLAFQAYEVRLA-QQHTALFEHSAQLAYRGRGA-- 311
           +YA H    V + M R D   + ++     AY+  L   Q    ++ SA  AY GRGA  
Sbjct: 170 DYAYH--PFVASVMGRSDPISLNDLYPLLLAYDYHLELYQDGGQYQSSANAAYCGRGAPR 227

Query: 310 --GYPAQFDRGSAPGSASSTGNFGRGSRPNANRNMVCQLCGRTGHVALKCFKRFDVHFTG 137
             G      RG   G+   +G     S P+    +VCQ+C + GH A +C+ R+D     
Sbjct: 228 GRGNSGNRGRGRNGGNRGGSGCGSNSSGPSMPNKVVCQICKKVGHEAPRCWYRYDDEKDQ 287

Query: 136 NETTNGSNAASNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
            +    + AA+           + G D          +WYVDSGA
Sbjct: 288 QQYLETAGAATT----------NYGYDT---------NWYVDSGA 313



 Score = 35.4 bits (80), Expect(2) = 4e-11
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLM 466
           Y  KMR I D+ AA GK +DD+E++ H++
Sbjct: 138 YINKMRAIKDELAAAGKIVDDNEVVSHIL 166


>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
          Length = 1198

 Score = 57.4 bits (137), Expect(2) = 4e-11
 Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
 Frame = -1

Query: 460 ALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAY------RGRGAGYPA 299
           A+V     + D   I+ +     A+E RL QQ +     S    Y      RG G  Y  
Sbjct: 86  AVVTAINIKDDKISIEVVHSMLLAFEHRLEQQSSIEQFSSISANYASSSNSRGSGRRYNG 145

Query: 298 QFDRGSAPGSASST-------GNFGRGSRPNANRNMV--CQLCGRTGHVALKCFKRFDVH 146
              +   P  ++ T       G +G+  R N+N +    CQLCG+ GH    C+ +FD+ 
Sbjct: 146 GRGQNHTPNISNYTYRGRGRGGRYGQNGRHNSNSSEKPQCQLCGKFGHTVQICYHKFDIS 205

Query: 145 FTGNETTN--GSNAASNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
           +  ++++N   SNA++  S  A ++  +          L   +WY+DSGA
Sbjct: 206 YQSSQSSNTSPSNASNPNSIPAMVASSN---------NLAEDTWYLDSGA 246



 Score = 35.8 bits (81), Expect(2) = 4e-11
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y MK++G AD  AAIG+P+ + + +M+L+  L
Sbjct: 49  YIMKVKGAADSLAAIGEPVSEQDQVMNLLGGL 80


>gb|ABF94964.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 846

 Score = 57.0 bits (136), Expect(2) = 5e-11
 Identities = 50/163 (30%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
 Frame = -1

Query: 454 VVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRGRGAGYPAQ----FDR 287
           V++T+  KD   + E      ++E RLA +H    + SA LA RGRG G   Q       
Sbjct: 133 VISTIVGKDFMTLGEAYSQLLSFEQRLALRHGG--DASANLANRGRGGGGGQQRGDNAGN 190

Query: 286 GSAPGSASSTGNFGRG------SRPNANRNMV--CQLCGRTGHVALKCFKRFDVHFTGNE 131
           G   G+ ++  N GRG      +RP    + +  CQLC + GH  + C+ R+D  F  +E
Sbjct: 191 GRGRGNNNNGANRGRGRGNNGGARPPGGVDNIPKCQLCYKRGHTVINCWYRYDEDFVPDE 250

Query: 130 TTNGSNAASNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
              GS               S G D          +WYVD+GA
Sbjct: 251 KYAGSAT-------------SYGIDT---------NWYVDTGA 271



 Score = 36.2 bits (82), Expect(2) = 5e-11
 Identities = 14/32 (43%), Positives = 24/32 (75%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y  KM+ +AD+  A GK +DDD+L+++++A L
Sbjct: 95  YVSKMKTLADEMTAAGKVVDDDDLVLYIIAGL 126


>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 358

 Score = 61.6 bits (148), Expect(2) = 5e-11
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
 Frame = -1

Query: 460 ALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRGRGAGYPAQFDRGS 281
           ++V +  +R +   + E+      +E R+     A  + SA  A RG   G       G 
Sbjct: 138 SVVSSVANRAEPISVSELHAQLTGFESRMELLQGAA-QSSANSASRGGRGGGGGGGGHGG 196

Query: 280 APGSASSTGNFGRGS--RPNANRNMVCQLCGRTGHVALKCFKRFDVHFTGNETTNGSNAA 107
                   G FGRG   R +     +CQLCG+ GH  +KC+KRFD  ++G E +    AA
Sbjct: 197 PNSGNRGRGGFGRGGGGRGDGKLKPICQLCGKIGHTVVKCWKRFDTSYSGEEKSVA--AA 254

Query: 106 SNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
           +N          S G D          +WY+D+GA
Sbjct: 255 TN----------SYGVDT---------NWYIDTGA 270



 Score = 31.6 bits (70), Expect(2) = 5e-11
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = -2

Query: 531 IADQFAAIGKPLDDDELIMHLMAEL 457
           I D+ ++ GKP+DD+EL+ +++A L
Sbjct: 108 IGDEMSSAGKPMDDEELVTYILAGL 132


>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
          Length = 1635

 Score = 58.9 bits (141), Expect(2) = 6e-11
 Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
 Frame = -1

Query: 460 ALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTA------LFEHSAQLAYRGRGAGYPA 299
           A+V     R D   I+ +     A+E RL QQ +          +++    RG G  Y  
Sbjct: 86  AVVTAINIRDDKISIEAVHSMLLAFEHRLEQQSSIEQFSPISANYASSXNSRGGGRRYNG 145

Query: 298 QFDRGSAPGSASST-------GNFGRGSRPNAN--RNMVCQLCGRTGHVALKCFKRFDVH 146
              +   P  ++ T       G +G   R N+N      CQLCG+ GH    C+ RFD+ 
Sbjct: 146 GRGQNHTPNISNYTYRGRGRGGRYGXNGRHNSNSFEKPQCQLCGKFGHTVQICYHRFDIS 205

Query: 145 FTGNET--TNGSNAAS-NGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSGA 2
           +  +++  T+ SNA + N  P    S  +  DD          +WY+DSGA
Sbjct: 206 YQSSQSINTSPSNAGNPNSIPAMVASSNNLADD----------TWYLDSGA 246



 Score = 33.9 bits (76), Expect(2) = 6e-11
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLM 466
           Y MK++G AD  AAIG+P+ + + +M+L+
Sbjct: 49  YIMKVKGAADSLAAIGEPILEQDQVMNLL 77


>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
          Length = 1139

 Score = 60.5 bits (145), Expect(2) = 6e-11
 Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
 Frame = -1

Query: 436 RKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRGRGAGYPAQFDRGSAPGSASST 257
           R D   ++ I     A++  L QQ +++ + SA  A      G   +F+ G   G   + 
Sbjct: 172 RDDKISLEAIHSMLLAFKHPLEQQ-SSIEQMSANYASFSNNRGGGRKFNGGHGQGYTLNN 230

Query: 256 GNF-----------GRGSRPNAN--RNMVCQLCGRTGHVALKCFKRFDVHFTGNETTNG- 119
            N+           G+G R N++      CQLCG+ GH A  C+ RFD+ F G +TT   
Sbjct: 231 NNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTTSH 290

Query: 118 --SNAASNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDSG 5
             +N   N  P    S  ++  D          SWY+DSG
Sbjct: 291 SLNNGNQNNIPTMVASASNSPADE---------SWYLDSG 321



 Score = 32.3 bits (72), Expect(2) = 6e-11
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y MK++G AD  AAIG+ + + + +M+L+  L
Sbjct: 127 YIMKIKGAADNLAAIGELISEQDQVMNLLGGL 158


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score = 56.6 bits (135), Expect(2) = 7e-11
 Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
 Frame = -1

Query: 454 VVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRGRGAGYPAQF-----D 290
           V++T+  KD   + E      ++E RLA +H    + S  LA RGRG G   Q      +
Sbjct: 186 VISTIVGKDTMTLGEAYSQLLSFEQRLALRHGG--DSSVNLANRGRGGGGGQQRGGNTGN 243

Query: 289 RGSAPGSASSTGNFGRG------SRP--NANRNMVCQLCGRTGHVALKCFKRFDVHFTGN 134
            G   G  ++  N GRG      +RP    +    CQLC + GH  + C+ R+D  F  +
Sbjct: 244 GGRGRGGNNNGANRGRGRGNNGGARPPGGVDNRPKCQLCYKRGHTVINCWYRYDEDFVPD 303

Query: 133 ETTNGSNAASNGSPKAFLSDFSAGD 59
           E   GS A S G    +  D SA D
Sbjct: 304 EKYAGS-ATSYGIDTNWYVDTSATD 327



 Score = 35.8 bits (81), Expect(2) = 7e-11
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y  KM+ +AD+  A GK +DDD+LI +++A L
Sbjct: 148 YVSKMKALADEMTAAGKIVDDDDLISYIIAGL 179


>emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]
          Length = 735

 Score = 59.7 bits (143), Expect(2) = 8e-11
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
 Frame = -1

Query: 457 LVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFEHSAQLAYRGRGAGYPAQFDRGSA 278
           +VVN   R +A  +QE+    Q++E+RL Q   A        A+   G    +  + G  
Sbjct: 187 IVVNITSRSEAISLQEVHYLLQSHEIRLEQLSVASVIDVPPAAHTITGGVQNSNTNDGQF 246

Query: 277 PGSASSTGNFGRGSRPNANRN-----MVCQLCGRTGHVALKCFKRFDVHF 143
            GS++      R  RP   RN     +V QLCG+ GH A+KCF  FDV+F
Sbjct: 247 RGSSN------RNFRPRNVRNPQTSRIVYQLCGKMGHTAMKCFHHFDVYF 290



 Score = 32.7 bits (73), Expect(2) = 8e-11
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -2

Query: 552 YFMKMRGIADQFAAIGKPLDDDELIMHLMAEL 457
           Y +KMR IAD  +  GKP+  ++LI++++  L
Sbjct: 149 YVLKMRNIADMLSTSGKPVPYEDLILYILGGL 180