BLASTX nr result
ID: Mentha28_contig00034976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00034976
(400 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 246 3e-63
ref|XP_004252454.1| PREDICTED: uncharacterized protein LOC101254... 231 1e-58
ref|XP_004229099.1| PREDICTED: uncharacterized protein LOC101259... 196 4e-48
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 172 4e-41
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 170 2e-40
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 169 4e-40
gb|ABG22123.1| polyprotein [Prunus avium] 169 4e-40
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 169 5e-40
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 169 5e-40
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 168 6e-40
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 168 6e-40
gb|AFB73911.1| polyprotein [Citrus sinensis] 168 8e-40
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 168 8e-40
gb|ABG22121.1| polyprotein [Solanum melongena] 167 1e-39
emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera] 166 3e-39
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 166 3e-39
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 166 4e-39
gb|AFB73912.1| polyprotein [Citrus sinensis] 165 5e-39
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 165 7e-39
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 165 7e-39
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 246 bits (627), Expect = 3e-63
Identities = 119/132 (90%), Positives = 123/132 (93%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
VCTRPD+AHAVSVVSRFMGQPG+EHWQAVKRIFRYLRGTSDVGLIYGGDT C V GYSDS
Sbjct: 1104 VCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSDS 1163
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
DYAGDVD+RRSMTGYVFTL GSVVSWKATLQ VTLSTTEAEYMALTEAAKEGIWLKGLV
Sbjct: 1164 DYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWLKGLV 1223
Query: 363 GDLGLHQEQAVV 398
DLGLH +QA V
Sbjct: 1224 SDLGLHHDQATV 1235
>ref|XP_004252454.1| PREDICTED: uncharacterized protein LOC101254576, partial [Solanum
lycopersicum]
Length = 538
Score = 231 bits (588), Expect = 1e-58
Identities = 113/132 (85%), Positives = 118/132 (89%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
VCTR D+AHAVSVVSRFMGQPG+E WQAVKRIFRYLRGTSDVGLIYGGDT C GYSDS
Sbjct: 114 VCTRQDLAHAVSVVSRFMGQPGRELWQAVKRIFRYLRGTSDVGLIYGGDTQCLATGYSDS 173
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
DYAGDVD RRSMTGYVFT GSVVSWKATLQA + LSTTE+EYMALTEAAKEGIWLKGLV
Sbjct: 174 DYAGDVDIRRSMTGYVFTRGGSVVSWKATLQATMNLSTTESEYMALTEAAKEGIWLKGLV 233
Query: 363 GDLGLHQEQAVV 398
DLGLH +QA V
Sbjct: 234 SDLGLHYDQATV 245
>ref|XP_004229099.1| PREDICTED: uncharacterized protein LOC101259364 [Solanum
lycopersicum]
Length = 505
Score = 196 bits (497), Expect = 4e-48
Identities = 101/132 (76%), Positives = 104/132 (78%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
VCTRPD+AHAVSVVSRFMGQPGKEHWQAVKRIFRYLR DS
Sbjct: 325 VCTRPDLAHAVSVVSRFMGQPGKEHWQAVKRIFRYLR---------------------DS 363
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
DYAGDVD+RRSMTGYVFTL GSVVSWKATLQ VTLSTTEAEYMALTEA KEGIWLKGLV
Sbjct: 364 DYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAVKEGIWLKGLV 423
Query: 363 GDLGLHQEQAVV 398
DLGLH +QA V
Sbjct: 424 SDLGLHHDQATV 435
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 172 bits (436), Expect = 4e-41
Identities = 83/133 (62%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGG-DTHCSVAGYSD 179
+CTRPD+A A+SVVS++M PGK HW+AVK IF+YL+ T +G+++ VAG+ D
Sbjct: 1095 ICTRPDLAQAMSVVSKYMSNPGKRHWEAVKWIFKYLKNTRQLGIMFERRQGEACVAGFVD 1154
Query: 180 SDYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGL 359
SD+AGD+D RRS GYVFT G VSWKATLQA LSTTEAEYMALTEA+KE IWL GL
Sbjct: 1155 SDFAGDLDRRRSTAGYVFTCGGGPVSWKATLQAVTALSTTEAEYMALTEASKEAIWLNGL 1214
Query: 360 VGDLGLHQEQAVV 398
G LG+HQE VV
Sbjct: 1215 AGQLGVHQEGVVV 1227
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 170 bits (431), Expect = 2e-40
Identities = 78/134 (58%), Positives = 106/134 (79%), Gaps = 2/134 (1%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCS--VAGYS 176
VC+RPD+A+AVS++SR+M PGK HWQAVK +F+YL GT +GL+YGG++ + G+
Sbjct: 1000 VCSRPDLAYAVSMISRYMSCPGKPHWQAVKWLFQYLAGTRSLGLVYGGNSQLETQLQGFV 1059
Query: 177 DSDYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKG 356
D+DYAG++D+R+S+TGYVFT G VSWKA LQ+ V LSTTEAEYMA+TEA KE IWLKG
Sbjct: 1060 DADYAGNIDTRKSLTGYVFTXFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIWLKG 1119
Query: 357 LVGDLGLHQEQAVV 398
+ +L +++ + VV
Sbjct: 1120 ITEELAMYRGKVVV 1133
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 169 bits (428), Expect = 4e-40
Identities = 83/132 (62%), Positives = 98/132 (74%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
+CTRPDIA AV VVSRFM PGKEHW AVKRI RY++GTS V + +GG + +V GY DS
Sbjct: 1100 ICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGG-SELTVRGYVDS 1158
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD D R+S TGYVFTL G VSW + LQ V LSTTEAEYMA T+A KE IW++ L+
Sbjct: 1159 DFAGDHDKRKSTTGYVFTLTGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLM 1218
Query: 363 GDLGLHQEQAVV 398
+LG QEQ V
Sbjct: 1219 EELGHKQEQITV 1230
>gb|ABG22123.1| polyprotein [Prunus avium]
Length = 276
Score = 169 bits (428), Expect = 4e-40
Identities = 84/134 (62%), Positives = 101/134 (75%), Gaps = 2/134 (1%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCS--VAGYS 176
VCTRPDI+ AVS+VSR+M PGK HWQAVK I RY+ GT DVGL++ D V GY
Sbjct: 117 VCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQCVVGYV 176
Query: 177 DSDYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKG 356
DSDYAGD+D RRS TG+VFT+ G VSW++ LQ+ V LSTTEAEYMA+TEA KE IWL+G
Sbjct: 177 DSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQG 236
Query: 357 LVGDLGLHQEQAVV 398
L+ DLG+ Q+ V
Sbjct: 237 LLDDLGVQQDHVDV 250
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 169 bits (427), Expect = 5e-40
Identities = 83/132 (62%), Positives = 98/132 (74%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
+CTRPDIA AV VVSRFM PGKEHW AVKRI RY++GTS V + +GG + +V GY DS
Sbjct: 1100 ICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGG-SELTVRGYVDS 1158
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD D R+S TGYVFTL G VSW + LQ V LSTTEAEYMA T+A KE IW++ L+
Sbjct: 1159 DFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLM 1218
Query: 363 GDLGLHQEQAVV 398
+LG QEQ V
Sbjct: 1219 EELGHKQEQITV 1230
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 169 bits (427), Expect = 5e-40
Identities = 83/132 (62%), Positives = 98/132 (74%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
+CTRPDIA AV VVSRFM PGKEHW AVKRI RY++GTS V + +GG + +V GY DS
Sbjct: 1100 ICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGG-SELTVRGYVDS 1158
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD D R+S TGYVFTL G VSW + LQ V LSTTEAEYMA T+A KE IW++ L+
Sbjct: 1159 DFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLM 1218
Query: 363 GDLGLHQEQAVV 398
+LG QEQ V
Sbjct: 1219 EELGHKQEQITV 1230
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 168 bits (426), Expect = 6e-40
Identities = 80/133 (60%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYG-GDTHCSVAGYSD 179
VCTRPD+A AVSVVSRFM PGK HW+AVK I RYL+G+S V L+YG GD + G++D
Sbjct: 1191 VCTRPDLAFAVSVVSRFMSNPGKAHWEAVKWIMRYLKGSSSVCLVYGNGDVSSGLVGFTD 1250
Query: 180 SDYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGL 359
SD+ GD+ RRS+T Y+FTL G +SW+A+LQ V LSTTEAEYM+LTE KEG+WL G
Sbjct: 1251 SDHGGDLMKRRSLTCYIFTLFGCAISWRASLQPTVALSTTEAEYMSLTEGVKEGMWLNGF 1310
Query: 360 VGDLGLHQEQAVV 398
+G LGL+ + V+
Sbjct: 1311 LGSLGLNLSKPVI 1323
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 168 bits (426), Expect = 6e-40
Identities = 80/133 (60%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYG-GDTHCSVAGYSD 179
VCTRPD+A AVSVVSRFM PGK HW+AVK I RYL+G+S V L+YG GD + G++D
Sbjct: 1428 VCTRPDLAFAVSVVSRFMSNPGKAHWEAVKWIMRYLKGSSSVCLVYGNGDVSSGLVGFTD 1487
Query: 180 SDYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGL 359
SD+ GD+ RRS+T Y+FTL G +SW+A+LQ V LSTTEAEYM+LTE KEG+WL G
Sbjct: 1488 SDHGGDLMKRRSLTCYIFTLFGCAISWRASLQPTVALSTTEAEYMSLTEGVKEGMWLNGF 1547
Query: 360 VGDLGLHQEQAVV 398
+G LGL+ + V+
Sbjct: 1548 LGSLGLNLSKPVI 1560
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 168 bits (425), Expect = 8e-40
Identities = 82/132 (62%), Positives = 101/132 (76%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
+CTRPDIA AV VVSR+M PG EHW AVKRI RY+RGTSDV L YGG + +V GY DS
Sbjct: 1104 ICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGTSDVALCYGG-SEFTVRGYVDS 1162
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD+D R+S TGYVFTL G+ VSW + LQ V LSTTEAEYMA T+A K+ IW++ L+
Sbjct: 1163 DFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKKAIWIQRLL 1222
Query: 363 GDLGLHQEQAVV 398
+LG Q++ +V
Sbjct: 1223 EELGHKQQKILV 1234
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 168 bits (425), Expect = 8e-40
Identities = 83/132 (62%), Positives = 98/132 (74%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
+CTRPDIA AV VVSRFM PGKEHW AVKRI RY++GTS V + +GG + +V GY DS
Sbjct: 1100 ICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGG-SELTVWGYVDS 1158
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD D R+S TGYVFTL G VSW + LQ V LSTTEAEYMA T+A KE IW++ L+
Sbjct: 1159 DFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLM 1218
Query: 363 GDLGLHQEQAVV 398
+LG QEQ V
Sbjct: 1219 EELGHKQEQITV 1230
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 167 bits (424), Expect = 1e-39
Identities = 84/134 (62%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCS--VAGYS 176
VCTR DI+ AVSVVSR+M PGK HWQAVK I RY++ T D+GL++ D V GY
Sbjct: 202 VCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTVDIGLVFEQDKSLGSCVVGYC 261
Query: 177 DSDYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKG 356
DSDYAGD+D RRS TGY+FTL VSWK+TLQA V LSTTEAEYMA+TEA KE IWL G
Sbjct: 262 DSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAITEAVKEAIWLHG 321
Query: 357 LVGDLGLHQEQAVV 398
L+ +LG+ Q+ +V
Sbjct: 322 LLEELGVGQKHLMV 335
>emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera]
Length = 281
Score = 166 bits (420), Expect = 3e-39
Identities = 80/132 (60%), Positives = 101/132 (76%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
VCTRPDIAHAV VVSRFM +PGK+HW+AVK I RYL+G+ D L + G + + GY D+
Sbjct: 77 VCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGAS-LKLQGYVDA 135
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD+DSR+S TG+VFTL G+V+SW + LQ VTLSTTEAEY+A TEA KE IWL G +
Sbjct: 136 DFAGDIDSRKSTTGFVFTLGGTVISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFL 195
Query: 363 GDLGLHQEQAVV 398
+LG QE ++
Sbjct: 196 DELGKKQEMGIL 207
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 166 bits (420), Expect = 3e-39
Identities = 81/132 (61%), Positives = 98/132 (74%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
VCTRPDI+ AVS+VSR+M PGK W AVK I RYL GT DVGL++ + GY DS
Sbjct: 90 VCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKNCGQQCVGYCDS 149
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD+D +RS +GYVFTL G VSW++ LQ+ + LSTTEAEY+A TEA KE IWLKGL+
Sbjct: 150 DFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLL 209
Query: 363 GDLGLHQEQAVV 398
GDLG+ QE V
Sbjct: 210 GDLGVIQENIAV 221
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 166 bits (419), Expect = 4e-39
Identities = 80/123 (65%), Positives = 99/123 (80%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
VC+RPD++HA+SVVSR+M PGKEHW+AV+ IFRYLRGTS L +G + + GY DS
Sbjct: 1037 VCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSD-GLVGYVDS 1095
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD+D RRS+TGYVFT+ G VSWKA+LQA V LSTTEAEYMA++EA KE IWL+GL
Sbjct: 1096 DFAGDLDRRRSLTGYVFTVGGCAVSWKASLQATVALSTTEAEYMAISEACKEVIWLRGLY 1155
Query: 363 GDL 371
+L
Sbjct: 1156 TEL 1158
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 165 bits (418), Expect = 5e-39
Identities = 81/131 (61%), Positives = 100/131 (76%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
+CTRPDIA AV VSR+M PG EHW AVKRI RY+RGTS+V L YGG + +V GY DS
Sbjct: 1104 ICTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYIRGTSNVALCYGG-SEFTVRGYVDS 1162
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD+D R+S TGYVFTL G+ VSW + LQ V LSTTEAEYMA T+A KE IW++ L+
Sbjct: 1163 DFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLL 1222
Query: 363 GDLGLHQEQAV 395
+LG H++Q +
Sbjct: 1223 EELG-HKQQKI 1232
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 165 bits (417), Expect = 7e-39
Identities = 80/132 (60%), Positives = 99/132 (75%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
VCTRPDIAHAV VVSRF+ PGKEHW+AVK I RYLRGT+ L +GG + GY+D+
Sbjct: 1123 VCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDA 1181
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D AGD+D+R+S TGY+FT G +SW++ LQ V LSTTEAEY+A TE KE IWLK +
Sbjct: 1182 DMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFL 1241
Query: 363 GDLGLHQEQAVV 398
+LGLHQ++ VV
Sbjct: 1242 QELGLHQKEYVV 1253
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 165 bits (417), Expect = 7e-39
Identities = 80/132 (60%), Positives = 96/132 (72%)
Frame = +3
Query: 3 VCTRPDIAHAVSVVSRFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDTHCSVAGYSDS 182
+CTRPDIA AV VSRFM PGKEHW AVKRI RY+RGTS L +GG + ++ GY DS
Sbjct: 1100 ICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGG-SEFTIRGYVDS 1158
Query: 183 DYAGDVDSRRSMTGYVFTLDGSVVSWKATLQAAVTLSTTEAEYMALTEAAKEGIWLKGLV 362
D+AGD+D R+S TGYVFTL G VSW + LQ V LSTTEAEYMA T+A KE IW + L+
Sbjct: 1159 DFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRLL 1218
Query: 363 GDLGLHQEQAVV 398
+LG Q++ V
Sbjct: 1219 EELGHKQQKITV 1230